BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00007758
         (1147 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [A...   207   8e-51
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   189   2e-45
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr...   187   5e-45
gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus pe...   186   1e-44
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...   185   3e-44
gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]     184   4e-44
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]   184   6e-44
ref|XP_006382253.1| Phytochrome-interacting factor 3 family prot...   182   3e-43
ref|XP_002330047.1| predicted protein [Populus trichocarpa]           182   3e-43
ref|XP_004495812.1| PREDICTED: transcription factor PIF3-like is...   179   1e-42
ref|XP_004495811.1| PREDICTED: transcription factor PIF3-like is...   179   1e-42
ref|XP_006605776.1| PREDICTED: transcription factor PIF3-like [G...   179   2e-42
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu...   177   5e-42
ref|XP_006589101.1| PREDICTED: transcription factor PIF3-like [G...   176   1e-41
ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [C...   175   3e-41
gb|EOY11781.1| Phytochrome interacting factor 3, putative isofor...   173   1e-40
gb|EOY11780.1| Phytochrome interacting factor 3, putative isofor...   173   1e-40
ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [F...   172   2e-40
ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatu...   172   2e-40
gb|EOY11783.1| Phytochrome interacting factor 3, putative isofor...   169   3e-39

>ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [Amborella trichopoda]
            gi|548842109|gb|ERN02066.1| hypothetical protein
            AMTR_s00045p00141060 [Amborella trichopoda]
          Length = 781

 Score =  207 bits (526), Expect = 8e-51
 Identities = 158/394 (40%), Positives = 208/394 (52%), Gaps = 13/394 (3%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNVEHGHVAKPPNWS 966
            +L+ DYC+EF  E S  ++ PLS   +NV  + +   L      + ++EH         S
Sbjct: 206  SLERDYCSEFFPELSGVNLTPLSKP-TNVVVSEKACNLDTTSHKNLSMEH---------S 255

Query: 965  SLGSSRIRA----SHLQQCPASALNSKLTVVDIRSSDDNVAQEPQCQD---VMDRKFQNQ 807
            S   SR+RA    +  Q  P++ +  +      +SS  N +  P       +++ K +  
Sbjct: 256  SQAPSRLRALQPFNSQQGQPSNPILRQFPSNTHKSSCGN-SSSPGANPAIGIVNSKTEQP 314

Query: 806  ELASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGLQSI----EKALTPSRNPVTL 639
               S +          LMNFSHF RPAAL K  L +      +    +KA     NPV  
Sbjct: 315  NHGSTRPPQPTHT--NLMNFSHFSRPAALVKANLQSMGMAGRLKNNNDKASVTDSNPVES 372

Query: 638  TLVERTRGSKEAN-KVPGQSGSGPHRLEFGSTMKT-LQGRNSVEFSNKISTGDALRNNTE 465
            ++V+    SK    K+  Q  +  H  +      +  + + SVE  + +   DA  +   
Sbjct: 373  SIVDSAVVSKSGKTKLDQQCQASLHPTKAKDISSSPAREKQSVE-EDVMYVEDASTSQNR 431

Query: 464  KHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSENITGAASNEPNHGKKRKEY 285
               + L   PSSSFAAS AL   +  K  E V+ SSSVCS N  G  S EP HG KRK  
Sbjct: 432  SPDRTL--CPSSSFAASTALGISESVKAVEPVVASSSVCSGNSGGRVSKEPRHGLKRKVG 489

Query: 284  DAEDSDYLSHSEDLQDESINIRKPPSGRDARTKRSRTAEVHNLSEXXXXXRINEKMRALQ 105
            + E+S Y   SED++ ES+  RK  +GR A TKRSR AEVHNLSE     RINEKMRALQ
Sbjct: 490  EQEESGY--QSEDVEGESVGTRKQATGRSATTKRSRAAEVHNLSERRRRDRINEKMRALQ 547

Query: 104  ELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            ELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 548  ELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 581


>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  189 bits (479), Expect = 2e-45
 Identities = 152/419 (36%), Positives = 203/419 (48%), Gaps = 38/419 (9%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGH 990
            +LQ+DYC++FL E S   VN LSTH +  +G  R +   Q ++ SN +        E G+
Sbjct: 121  SLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSN-NQTIKDSNTISAHNGVSLEQGN 179

Query: 989  VAKPPNWSSLGSSRIRASHL-----QQCPASALNSKLTVVDIRS-----------SDDNV 858
             +K  + + +  SR R+S L     QQC     + +  V D  S           S +++
Sbjct: 180  ASKA-SAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSI 238

Query: 857  AQEPQCQDVMDRKFQNQELASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGL--- 687
                        K Q Q+    +          LMNFSHF RPAAL K  L N   +   
Sbjct: 239  RLPASTSGFSSTKTQKQDPGQTRNNSG------LMNFSHFSRPAALVKANLQNIGAIAGP 292

Query: 686  ---------QSIEKALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTM-KT 537
                        ++    SRNP     V+ + G ++      +    P  ++    + KT
Sbjct: 293  SSSSKDRIGSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVMVPASVDLKPVVAKT 352

Query: 536  LQGRNSVEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSS 357
            ++     E S  I    A +N    +  L          A  A    D  K  E  +  S
Sbjct: 353  MEEPLPAEQSPVICQEGACKNEKSSNQVL---------GARTAKGIPDGEKTIEPAVACS 403

Query: 356  SVCSENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKP-PSGRDARTKRS 180
            SVCS N    ASN+P H  KRK  D E+S+    SED+++ES+ +RK  P+     +KRS
Sbjct: 404  SVCSGNSVERASNDPKHNLKRKCRDTEESE--CPSEDVEEESVGVRKSAPAKGGTGSKRS 461

Query: 179  RTAEVHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            R AEVHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 462  RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 520


>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
            gi|567862616|ref|XP_006423962.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|568853382|ref|XP_006480339.1| PREDICTED: transcription
            factor PIF3-like [Citrus sinensis]
            gi|557525895|gb|ESR37201.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|557525896|gb|ESR37202.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
          Length = 735

 Score =  187 bits (476), Expect = 5e-45
 Identities = 151/421 (35%), Positives = 208/421 (49%), Gaps = 40/421 (9%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGH 990
            +LQ DYC++FL+E S    N LS+ ++N A   + +   Q  R  N+V        EHG+
Sbjct: 125  SLQQDYCSDFLHELSGVTGNELSS-QNNFASFDKRSSSNQFDREFNSVFGNHGARLEHGN 183

Query: 989  VAKPPNWSSLGSSRIRAS-------HLQQCPASALNSKLTVVD-----IRSSDDNV---- 858
            V+K  +     ++R R+S         QQC  S  N +  V D     I++S DN     
Sbjct: 184  VSKVSSVGGGEATRPRSSTNSVYTSSSQQCQTSLPNLRSGVSDSTSNGIKNSTDNGIFQG 243

Query: 857  AQEPQCQDVMDRKFQNQELASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGLQ-- 684
            +      ++   K   Q+               +MNFSHF RP AL +  L N   +   
Sbjct: 244  SNPTATGNLSGLKLHKQD------QRLSANNSGVMNFSHFARPVALVRANLQNIGSMPGA 297

Query: 683  ---------SIEKALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQ 531
                     S +K+   SR+PV   L++ +   ++      +S   P  +     +K  +
Sbjct: 298  RLSRIERMGSKDKSSVASRSPVESPLIDSSGCLRK------ESSCQPAAVTSKVDVKPQE 351

Query: 530  GRNSV----EFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIP 363
             ++S     E        DAL N         D  PS   A S      +  K  E V+ 
Sbjct: 352  AKSSEQPVSEPPEAACREDALNN---------DKKPSQVHAESATKGVVESEKTVEPVVA 402

Query: 362  SSSVCSENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGR-DARTK 186
            +SSVCS N    AS++  H  KRK  D +DS+  S  +D+++ES+ ++K   GR    +K
Sbjct: 403  ASSVCSGNSVERASDDLPHNVKRKHCDLDDSECPSEEQDVEEESVGVKKQVPGRVGTGSK 462

Query: 185  RSRTAEVHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMS 6
            RSR AEVHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMS
Sbjct: 463  RSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 522

Query: 5    M 3
            M
Sbjct: 523  M 523


>gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus persica]
          Length = 744

 Score =  186 bits (473), Expect = 1e-44
 Identities = 147/413 (35%), Positives = 205/413 (49%), Gaps = 33/413 (7%)
 Frame = -3

Query: 1142 LQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNN--------VEHGHV 987
            L ++YC EFL E S    N +S++ SN+A   + +   Q  R SN         +E  + 
Sbjct: 116  LHHEYCDEFLPELSTVTANEISSN-SNLASMDKRSSSSQVYRDSNTNSAHEGAYLEQRNA 174

Query: 986  AKPPNWSSLGSSRIRASHLQQCPASALNSKLTVVDIRS--------SDDNVAQEPQCQDV 831
             K  +      SR R    Q  P S+  S+      RS        +  N      C++ 
Sbjct: 175  PKVASIDGADVSRPRTGTSQLYPLSSQQSQSLFPSFRSRVSDIVGDNTGNATHPTVCKNS 234

Query: 830  MDRK----FQNQELASCKXXXXXXXXGTLMNFSHFIRPAALAK-----VGLHNATGLQSI 678
                    F   ++             +++NFSHF RPAAL K     +G+   +GL S+
Sbjct: 235  TQVSSAGVFPGIKMQRQDPVMPSNNNSSVVNFSHFSRPAALVKSNLQSIGVVAGSGLSSM 294

Query: 677  EK-------ALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGST-MKTLQGRN 522
            EK       +   S NP   TL++ + G  + +    Q  +    +E   T  K L+   
Sbjct: 295  EKIGNKGKVSAATSNNPPESTLIDSSSGLSKESNSQCQHITVTSNVELKPTEAKPLEESC 354

Query: 521  SVEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSE 342
            + + S      DA +N+T  +      +P  S  A+  L   D  K  E V+ +SSVCS 
Sbjct: 355  AAKQSEAACQEDASKNDTNTN-----HIPCES--ANRVL--RDGEKTLEPVV-ASSVCSG 404

Query: 341  NITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDARTKRSRTAEVH 162
            N     S++P H  KRK  D ++S+   HS+D+++ES+ ++K    R   +KRSR AEVH
Sbjct: 405  NSVERGSDDPTHALKRKSRDTDESE--CHSDDVEEESVGVKKIAHARGMGSKRSRAAEVH 462

Query: 161  NLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            NLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 463  NLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 515


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
            gi|223548548|gb|EEF50039.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 758

 Score =  185 bits (470), Expect = 3e-44
 Identities = 155/420 (36%), Positives = 205/420 (48%), Gaps = 39/420 (9%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSN--------NVEHGH 990
            +LQ DYC EFL E S   VN  +  +++ A + +     Q VR S+        ++E GH
Sbjct: 125  SLQQDYCHEFLAELSGVTVNEHA--QNSFASSDKKCNGNQSVRDSHTASVHNGLSLEQGH 182

Query: 989  VAKPPNW-------SSLGSSRIRASHLQQCPAS---------ALNSKLT--VVDIRSSDD 864
            + +  +        S   +S++ +S +QQC AS         A N++ T     + SS D
Sbjct: 183  MPRVSSGRDGDATRSRTTASQLYSSSVQQCQASFPHFRSRISANNAESTNNSTHVASSGD 242

Query: 863  NVAQEPQCQDVMDRKFQNQELASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHN----- 699
             +   P        K Q Q               +LMNFSHF RP ALAK    N     
Sbjct: 243  PIRGSPSGGGFPSIKAQKQ------VPVLATTNSSLMNFSHFSRPVALAKANFENIGTRA 296

Query: 698  ATGLQSIEK-------ALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMK 540
             +G+ SIE+       ++  S NP    L E   G K+       S   P  +      K
Sbjct: 297  GSGISSIERIGSQDKGSIASSSNPAESMLNETFSGLKKETS----SRCRPVMVSSKVDDK 352

Query: 539  TLQGRNSVEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPS 360
             L  R + E        +A+ N+ +      +D     FAAS      D  K  E ++ S
Sbjct: 353  PLDHRPAEE-PLLAKQPEAMENDCK------NDKNHCQFAASATKGLADGEKTAEPIVAS 405

Query: 359  SSVCSENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDAR-TKR 183
            SSVCS N     S+EP    KRK  + E+S+    SED+++ES+  +K    R    +KR
Sbjct: 406  SSVCSGNSMERVSDEPMQNLKRKHRETEESE--GPSEDVEEESVGGKKAAPARGGTGSKR 463

Query: 182  SRTAEVHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            SR AEVHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 464  SRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 523


>gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]
          Length = 758

 Score =  184 bits (468), Expect = 4e-44
 Identities = 149/423 (35%), Positives = 210/423 (49%), Gaps = 42/423 (9%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSN--NVEHGHVAKPPN 972
            +LQ++YC +FL E S   VN +S   +N A T   +   Q  R SN  +V++    +  N
Sbjct: 120  SLQHEYCRDFLPELSGVTVNEISKSNNNFA-TNDKSSCNQLYRESNANSVDYCASLEQRN 178

Query: 971  WSS---------------LGSSRI-RASHLQQCPASALNSKLTVVD-IRSSDDNVAQEPQ 843
             SS                G+S++  +S  QQC AS  + +  V+D +  +  + A    
Sbjct: 179  NSSKVGSVVASDVSTRPRTGTSQLYSSSSSQQCQASFPSFRSRVLDTVGDNTTSAAHHAV 238

Query: 842  CQDVMDRK----FQNQELASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHN-----ATG 690
            C D         F + ++ + +          ++NFSHF RPAALAK  L N      + 
Sbjct: 239  CNDSGRVSSVGGFPSLKMHNRQDSIPPSNSFNVLNFSHFTRPAALAKASLQNIGTMPGSN 298

Query: 689  LQSIEKALTPS-RNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQGRNSVE 513
            + + EK    +  NP    L++   G ++      Q  +        S  ++L+   + +
Sbjct: 299  MPNKEKGCAANGNNPPKSGLIDTGSGLRKETSAHCQVVASSGVNLKPSEARSLEEPCAAK 358

Query: 512  FSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSENIT 333
             S  +   DA +N          D+ +S    S      D  K+ E V+ SSSVCS N  
Sbjct: 359  DSEAVCREDASKN----------DINNSFPCESTNRALPDGEKNIEPVVASSSVCSGNSV 408

Query: 332  GAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDARTKRSRTAEVHNLS 153
              AS++P H  KRK  D EDS+   HSED+++ES+ ++K    R + +KRSR AEVHNLS
Sbjct: 409  ERASDDPTHVLKRKFRDTEDSE--CHSEDVEEESVGVKKTAPPRASGSKRSRAAEVHNLS 466

Query: 152  EXXXXXR-------------INEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQI 12
            E                   INEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQI
Sbjct: 467  ERILNGFFIFHLSEQRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 526

Query: 11   MSM 3
            MSM
Sbjct: 527  MSM 529


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score =  184 bits (467), Expect = 6e-44
 Identities = 152/412 (36%), Positives = 205/412 (49%), Gaps = 31/412 (7%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGH 990
            +LQ+DYC++FL E S   VN LSTH +  +G  R +   Q ++ SN +        E G+
Sbjct: 121  SLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSN-NQTIKDSNTISAHNGVSLEQGN 179

Query: 989  VAKPPNWSSLGSSRIRASHL-----QQCPASALNSKLTVVDIRS-----------SDDNV 858
             +K  + + +  SR R+S L     QQC     + +  V D  S           S +++
Sbjct: 180  ASK-ASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSI 238

Query: 857  AQEPQCQDVMDRKFQNQELASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGLQSI 678
                        K Q Q+    +          LMNFSHF RPAAL K  L N   + +I
Sbjct: 239  RLPASTSGFSSTKTQKQDPGQTRNNSG------LMNFSHFSRPAALVKANLQN---IGAI 289

Query: 677  EKALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQGRNSVEFSNKI 498
                + S++ +         GSK+  K P  S   P       +   LQ ++    S  +
Sbjct: 290  AGPSSSSKDRI---------GSKD--KQPAASSRNPAESRHVDSSCGLQ-KDVDSHSEPV 337

Query: 497  STGDALRNNTEKHTKLLDDLPSSSFAASVALCRH------DIRKDPEAVIPSSSVCSENI 336
                ++         + + LP+    + V L R       D  K  E  +  SSVCS N 
Sbjct: 338  MVPASVDLKPVVAKTMEEPLPAEQ--SPVHLPRRTAKGIPDGEKSIEPAVACSSVCSGNS 395

Query: 335  TGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRK-PPSGRDARTKRSRTAEVHN 159
               ASN+P H  KRK  D E+S+    SED+++ES+ +RK  P+     +KRSR AEVHN
Sbjct: 396  VERASNDPKHNLKRKCRDTEESE--CPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHN 453

Query: 158  LSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            LSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 454  LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 505


>ref|XP_006382253.1| Phytochrome-interacting factor 3 family protein [Populus trichocarpa]
            gi|550337605|gb|ERP60050.1| Phytochrome-interacting
            factor 3 family protein [Populus trichocarpa]
          Length = 742

 Score =  182 bits (461), Expect = 3e-43
 Identities = 155/420 (36%), Positives = 202/420 (48%), Gaps = 41/420 (9%)
 Frame = -3

Query: 1139 QNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGHVA 984
            Q+DYC+EFL E S   VN  S+ +SN    G+ +   Q VR S  V        E G VA
Sbjct: 125  QHDYCSEFLPELSGVTVNGHSS-QSNFPSFGKKS-FSQSVRDSRTVSVHNGLSLEQGDVA 182

Query: 983  KPPNWSSLGSSRIRASHLQQCPASALNSKLTVVDIRS--------SDDNVAQEPQCQDVM 828
            K  +     ++R R S  Q   +S+ + + +    RS        S  N A      D +
Sbjct: 183  KNSSAGDTEANRPRTSASQLYLSSSEHCQTSFPYFRSRVSAKNGDSTSNAAHHVVSVDSI 242

Query: 827  DRKFQNQELASCKXXXXXXXXGT----LMNFSHFIRPAALAKVGLHN-----ATGLQSIE 675
                      S K         T    LMNFSHF RPAALAK  L N      TG+ ++E
Sbjct: 243  RAPTSGGGFPSIKMQKQVPAQSTTNSSLMNFSHFARPAALAKANLQNIGMRAGTGISNME 302

Query: 674  K-------ALTPSRNPVTLTLVERTRGS-KEANK------VPGQSGSGPHRLEFGSTMKT 537
            +       ++  S NP   T +    G  KE +       +P +  + P      S  K 
Sbjct: 303  RTQNKDKGSIASSSNPAECTPINSCSGLLKETSSHCLPVLMPPKVDAKP------SEAKP 356

Query: 536  LQGRNSVEFSNK-ISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPS 360
             +G    E     I  GD+  +   +           +F  S      D+ K  E V+ S
Sbjct: 357  AEGFVPAELPEATIPEGDSKSDRNCRQ----------NFCESAIKGVADVEKTKEPVVAS 406

Query: 359  SSVCSENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDAR-TKR 183
            SSV S+N    AS++P    KRK  D E+S+    SED+++ES+  +K    R    +KR
Sbjct: 407  SSVGSDNSVERASDDPTENLKRKHRDTEESE--GPSEDVEEESVGAKKQAPARAGNGSKR 464

Query: 182  SRTAEVHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            +R AEVHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 465  NRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 524


>ref|XP_002330047.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  182 bits (461), Expect = 3e-43
 Identities = 155/420 (36%), Positives = 202/420 (48%), Gaps = 41/420 (9%)
 Frame = -3

Query: 1139 QNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGHVA 984
            Q+DYC+EFL E S   VN  S+ +SN    G+ +   Q VR S  V        E G VA
Sbjct: 116  QHDYCSEFLPELSGVTVNGHSS-QSNFPSFGKKS-FSQSVRDSRTVSVHNGLSLEQGDVA 173

Query: 983  KPPNWSSLGSSRIRASHLQQCPASALNSKLTVVDIRS--------SDDNVAQEPQCQDVM 828
            K  +     ++R R S  Q   +S+ + + +    RS        S  N A      D +
Sbjct: 174  KNSSAGDTEANRPRTSASQLYLSSSEHCQTSFPYFRSRVSAKNGDSTSNAAHHVVSVDSI 233

Query: 827  DRKFQNQELASCKXXXXXXXXGT----LMNFSHFIRPAALAKVGLHN-----ATGLQSIE 675
                      S K         T    LMNFSHF RPAALAK  L N      TG+ ++E
Sbjct: 234  RAPTSGGGFPSIKMQKQVPAQSTTNSSLMNFSHFARPAALAKANLQNIGMRAGTGISNME 293

Query: 674  K-------ALTPSRNPVTLTLVERTRGS-KEANK------VPGQSGSGPHRLEFGSTMKT 537
            +       ++  S NP   T +    G  KE +       +P +  + P      S  K 
Sbjct: 294  RTQNKDKGSIASSSNPAECTPINSCSGLLKETSSHCLPVLMPPKVDAKP------SEAKP 347

Query: 536  LQGRNSVEFSNK-ISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPS 360
             +G    E     I  GD+  +   +           +F  S      D+ K  E V+ S
Sbjct: 348  AEGFVPAELPEATIPEGDSKSDRNCRQ----------NFCESAIKGVADVEKTKEPVVAS 397

Query: 359  SSVCSENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDAR-TKR 183
            SSV S+N    AS++P    KRK  D E+S+    SED+++ES+  +K    R    +KR
Sbjct: 398  SSVGSDNSVERASDDPTENLKRKHRDTEESE--GPSEDVEEESVGAKKQAPARAGNGSKR 455

Query: 182  SRTAEVHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            +R AEVHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 456  NRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 515


>ref|XP_004495812.1| PREDICTED: transcription factor PIF3-like isoform X2 [Cicer
            arietinum]
          Length = 723

 Score =  179 bits (455), Expect = 1e-42
 Identities = 143/408 (35%), Positives = 200/408 (49%), Gaps = 27/408 (6%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSN-------NVEHGHV 987
            + QN+Y + FL+E  +   N L    +N     + +   Q  R S+       NV  G  
Sbjct: 131  SFQNEYGSNFLHELPSVAGNNLPAASNNFTLLDKRSNGNQIFRKSHKNSAEPMNVSRGSS 190

Query: 986  AKPPNWSSLGSSRIRASHLQQCPASALNSKLTVVDIRSSDDNVAQEPQCQDVMDRKFQNQ 807
            A+P   + L  +     +        + S+ + V   ++  N  Q+    ++      + 
Sbjct: 191  AEPVETARLNKASTSQLYPPSTSFLTVRSRASDVAENNNASNANQDVPYGEITRITSSSS 250

Query: 806  ELASCKXXXXXXXXG----TLMNFSHFIRPAALAKVGLHNAT---GLQSIEK-------- 672
            +  S K             +LMNFSHF RPAA+ +  L N +   GL S           
Sbjct: 251  DFPSLKVQKQDPKMPGNSSSLMNFSHFARPAAIVRANLQNISLKSGLVSASARSDSIAVK 310

Query: 671  ---ALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQGRNSVEFSNK 501
               A + S NP   TLV  +    +  +   Q  +   +++    +K LQ + S+E    
Sbjct: 311  NKGAASTSSNPPDSTLVNSSGDCSKEPETRCQKVAEQPKVD----LKPLQPK-SLELKVV 365

Query: 500  ISTGDALRNNTEKHTKLLDDLPSSSFAAS-VALCRHDIRKDPEAVIPSSSVCSENITGAA 324
             S          K + + +D PS+      VA  +  + K  E  + SSSVCS N     
Sbjct: 366  ASKQS---EPACKESGVKNDQPSNQVLGDGVAKGQTTVEKGVEVAVASSSVCSGNGADRG 422

Query: 323  SNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDA-RTKRSRTAEVHNLSEX 147
            S++PN   KRK  D EDS+   HSED++DES+ ++K  SGR    +KRSR AEVHNLSE 
Sbjct: 423  SDDPNQNLKRKSRDTEDSE--CHSEDVEDESVVVKKGASGRGVIGSKRSRAAEVHNLSER 480

Query: 146  XXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
                RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQ+MSM
Sbjct: 481  RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSM 528


>ref|XP_004495811.1| PREDICTED: transcription factor PIF3-like isoform X1 [Cicer
            arietinum]
          Length = 733

 Score =  179 bits (455), Expect = 1e-42
 Identities = 143/408 (35%), Positives = 200/408 (49%), Gaps = 27/408 (6%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSN-------NVEHGHV 987
            + QN+Y + FL+E  +   N L    +N     + +   Q  R S+       NV  G  
Sbjct: 131  SFQNEYGSNFLHELPSVAGNNLPAASNNFTLLDKRSNGNQIFRKSHKNSAEPMNVSRGSS 190

Query: 986  AKPPNWSSLGSSRIRASHLQQCPASALNSKLTVVDIRSSDDNVAQEPQCQDVMDRKFQNQ 807
            A+P   + L  +     +        + S+ + V   ++  N  Q+    ++      + 
Sbjct: 191  AEPVETARLNKASTSQLYPPSTSFLTVRSRASDVAENNNASNANQDVPYGEITRITSSSS 250

Query: 806  ELASCKXXXXXXXXG----TLMNFSHFIRPAALAKVGLHNAT---GLQSIEK-------- 672
            +  S K             +LMNFSHF RPAA+ +  L N +   GL S           
Sbjct: 251  DFPSLKVQKQDPKMPGNSSSLMNFSHFARPAAIVRANLQNISLKSGLVSASARSDSIAVK 310

Query: 671  ---ALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQGRNSVEFSNK 501
               A + S NP   TLV  +    +  +   Q  +   +++    +K LQ + S+E    
Sbjct: 311  NKGAASTSSNPPDSTLVNSSGDCSKEPETRCQKVAEQPKVD----LKPLQPK-SLELKVV 365

Query: 500  ISTGDALRNNTEKHTKLLDDLPSSSFAAS-VALCRHDIRKDPEAVIPSSSVCSENITGAA 324
             S          K + + +D PS+      VA  +  + K  E  + SSSVCS N     
Sbjct: 366  ASKQS---EPACKESGVKNDQPSNQVLGDGVAKGQTTVEKGVEVAVASSSVCSGNGADRG 422

Query: 323  SNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDA-RTKRSRTAEVHNLSEX 147
            S++PN   KRK  D EDS+   HSED++DES+ ++K  SGR    +KRSR AEVHNLSE 
Sbjct: 423  SDDPNQNLKRKSRDTEDSE--CHSEDVEDESVVVKKGASGRGVIGSKRSRAAEVHNLSER 480

Query: 146  XXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
                RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQ+MSM
Sbjct: 481  RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSM 528


>ref|XP_006605776.1| PREDICTED: transcription factor PIF3-like [Glycine max]
          Length = 722

 Score =  179 bits (453), Expect = 2e-42
 Identities = 144/403 (35%), Positives = 204/403 (50%), Gaps = 22/403 (5%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDV-NPLSTHRSNVAGTGRTAGLGQEVRSSNNVEHGHVAKPPNW 969
            +LQ++Y ++FL+  ++F + +  S        + +T+     V   ++ E    A+P   
Sbjct: 129  SLQHEYGSDFLHASNSFTLLDKKSNGNMAFRDSHKTSEEQGNVFKGSSAEQVETARP--- 185

Query: 968  SSLGSSRIRASHLQQCPASALNSKLTVVDIRSSDD--NVAQEPQCQDVMDRKFQNQELAS 795
                +S++    L QC  S ++S+    DI  +++  N  Q+    ++      + +L+S
Sbjct: 186  -KASTSQLFPPSLHQCQTSFVSSRSRASDITENNNTSNANQDVSYGEITHILSSSSDLSS 244

Query: 794  CKXXXXXXXXG------TLMNFSHFIRPAALAKVGLHNA---TGLQSIEK---------A 669
             K               T+MNFSHF RPAA+ +  L N    +GL S            A
Sbjct: 245  AKVQKCDPPITSNGSSSTIMNFSHFARPAAMVRANLQNIGLKSGLSSARSDSMEIKNKGA 304

Query: 668  LTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQGRNSVEFSNKISTG 489
               S NP    LV+    S E +K P          +    + +LQ + SVE  N + + 
Sbjct: 305  AATSSNPPESILVD---SSGECSKEPTMQCQQVVE-QSKPDVNSLQPK-SVE-QNAVPSK 358

Query: 488  DALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSENITGAASNEPN 309
             +   + E  TK+ D  P+     S    +    K  E  + SSSVCS       S+EPN
Sbjct: 359  QSEPASKESATKI-DQTPNQVLGDSGTKGQTAAEKSMEPAVASSSVCSGTGADQGSDEPN 417

Query: 308  HGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRD-ARTKRSRTAEVHNLSEXXXXXR 132
               KRK  D +DS+   HSED+++ES   +K   G+  A +KRSR AEVHNLSE     R
Sbjct: 418  QNLKRKTKDTDDSE--CHSEDVEEESAGAKKTAGGQGGAGSKRSRAAEVHNLSERRRRDR 475

Query: 131  INEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            INEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 476  INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 518


>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
            gi|550324617|gb|EEE95373.2| hypothetical protein
            POPTR_0013s00310g [Populus trichocarpa]
          Length = 713

 Score =  177 bits (450), Expect = 5e-42
 Identities = 139/404 (34%), Positives = 189/404 (46%), Gaps = 24/404 (5%)
 Frame = -3

Query: 1142 LQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLG------QEVRSSNNVEHGHVAK 981
            LQ+DYC++FL E S   VN  S+  +  +   R+            V +  N+E G V  
Sbjct: 119  LQHDYCSDFLPELSGVTVNEHSSQSNFPSFDKRSCNQSITDSHTVSVHNGLNLEQGDVVM 178

Query: 980  PPNWSSLGSSRIRASHLQQCPASALNSKLTVVDIRSSDD--------NVAQEPQCQDVMD 825
              +   + + R R S  Q  P+S+   K +    RS D         N        D + 
Sbjct: 179  NSSAGDIDAKRPRTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIR 238

Query: 824  RKFQNQELASCKXXXXXXXXG----TLMNFSHFIRPAALAKVGLHN-----ATGLQSIEK 672
                     S K             +L+NFSHF RPAAL K  L N     ++G  S+E+
Sbjct: 239  APTSGGGFPSIKMQKQVPAPSPINSSLINFSHFARPAALVKANLQNVGMRASSGTSSMER 298

Query: 671  ALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQGRNSVEFSNKIST 492
                 +  + L   + T      N +  +    P      + +K  +G    E   ++S 
Sbjct: 299  MQNKDKGSIGLP--KETDSHCRPNMMSSKVEVKP------TEVKPAEGSVPAELPEEMSQ 350

Query: 491  GDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSENITGAASNEP 312
                +++   H          +F  S      D+ K  E ++ SSSV S N     S++P
Sbjct: 351  EGDSKSDRNCH---------QNFGESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDP 401

Query: 311  NHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDAR-TKRSRTAEVHNLSEXXXXX 135
                KRK  D E+S+    SED ++ES+  +KP S R    +KR R AEVHNLSE     
Sbjct: 402  TENLKRKHRDTEESE--GPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRD 459

Query: 134  RINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 460  RINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 503


>ref|XP_006589101.1| PREDICTED: transcription factor PIF3-like [Glycine max]
          Length = 691

 Score =  176 bits (447), Expect = 1e-41
 Identities = 144/410 (35%), Positives = 199/410 (48%), Gaps = 29/410 (7%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNVEHGHVAKPPNWS 966
            +LQ +Y ++FL   ++F    L   +SN    G  A    +  S    E G+V K  +  
Sbjct: 129  SLQQEYGSDFLPASNSFT---LLDKKSN----GNMAFRDSQKTSE---EQGNVFKGSSAG 178

Query: 965  SLGSSRIRASH--------LQQCPASALNSKLTVVDIRSSDD--NVAQEPQCQDVM---- 828
             + ++R +AS         L QC  S ++S+    DI  +++  N  Q+     +     
Sbjct: 179  QVETARPKASSTSQLFPPSLHQCQTSFVSSRSRASDITENNNTSNANQDASYGKITHILS 238

Query: 827  -DRKFQNQELASCKXXXXXXXXG-TLMNFSHFIRPAALAKVGLHNA---TGLQSIEK--- 672
                F N ++  C           T+MNFSHF RPAA+ +  LH+    +GL S      
Sbjct: 239  SSSDFSNAKVQKCDPPMNSNGSSSTIMNFSHFARPAAMVRANLHSIGLKSGLSSSRSDSM 298

Query: 671  ------ALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTMKTLQGRNSVEF 510
                  A   S NP    LV+ +    +   +  Q      + +  S +     +N+V  
Sbjct: 299  EMKNKGAAATSSNPPESILVDSSVECLKEPIIQCQQVVEQSKADVNSLLPKSVEQNAVPS 358

Query: 509  SNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSENITG 330
                  G       ++    +D +P+     +    +    K  E  + SSSVCS N T 
Sbjct: 359  KQSEPAG-------KESAAKIDLIPNQVPGDNGTKGQTAAEKSKEPAVASSSVCSGNGTD 411

Query: 329  AASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRD-ARTKRSRTAEVHNLS 153
              S EPN   KRK  D +DS+   HSED+++ES   +K   GR  A +KRSR AEVHNLS
Sbjct: 412  QGSEEPNQNLKRKRKDTDDSE--CHSEDVEEESAGAKKTAGGRGGAGSKRSRAAEVHNLS 469

Query: 152  EXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            E     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 470  ERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 519


>ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
            gi|449522990|ref|XP_004168508.1| PREDICTED: transcription
            factor PIF3-like [Cucumis sativus]
          Length = 696

 Score =  175 bits (444), Expect = 3e-41
 Identities = 144/420 (34%), Positives = 205/420 (48%), Gaps = 40/420 (9%)
 Frame = -3

Query: 1142 LQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSN---NVEHGHVAKPPN 972
            LQ+DY ++FL E S   VN   +  S  +  G+ +G  Q  R  +   N  HG   +  N
Sbjct: 123  LQHDYSSDFLPELSGVTVNDFPSRNSIASSIGKASGGNQVNRERDMHLNSMHGANLEDGN 182

Query: 971  WSSLGS-----SRIRASHLQQCPASALNSKLTVVDIRSS--------------DDNVAQE 849
             S L S     +R R+S  Q   +++  S+ +   +R+               D  V   
Sbjct: 183  ISKLSSLDVSAARARSSTNQLHSSASQQSQTSFPHLRTKCAGETENTTGKMLHDSLVGHS 242

Query: 848  PQCQDVMDRKFQNQELASCKXXXXXXXXGT-LMNFSHFIRPAALAKV-----GLHNATGL 687
            PQ   +      +  +A  K         + ++NFSHF+RPA+L K      G+    G 
Sbjct: 243  PQVPLIAS---SSSSIAKQKLDPTPPNNSSNIINFSHFLRPASLLKSNPQKHGVPGTGGS 299

Query: 686  QSIEKALTPSR----NPVTLTLV--------ERTRGSKEANKVPGQSGSGPHRLEFGSTM 543
            ++++  +  S      P   +L+        E   G K A  VP   G  P      S  
Sbjct: 300  RNLDSMVNNSSAANSQPHESSLIAIQGGIRNESNSGCKNA-VVPTIDGKSP------SDA 352

Query: 542  KTLQGRNSVEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIP 363
            K L+   + +       GD+  +         DD     F         D  K  E+V  
Sbjct: 353  KPLEQSQTNKQPEAACLGDSADH---------DDRLKHRFEVGATKGLADSEKAVESVF- 402

Query: 362  SSSVCSENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRDARTKR 183
            ++S+CS N    AS++P H +KRK +D EDS++  HS+D++++  ++++  S R A +KR
Sbjct: 403  AASLCSRNSVEGASDDPPHNRKRKCHDTEDSEW--HSDDVEEDCNDVKRVTSARGAGSKR 460

Query: 182  SRTAEVHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            SR AEVHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 461  SRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 520


>gb|EOY11781.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
            cacao]
          Length = 731

 Score =  173 bits (439), Expect = 1e-40
 Identities = 149/415 (35%), Positives = 206/415 (49%), Gaps = 34/415 (8%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGH 990
            +LQ++Y ++FL E S   VN  STH SN A   R +   Q +R S  V        E G+
Sbjct: 131  SLQSEY-SDFLPELSGVAVNETSTH-SNFASFDRRS---QSIRDSCTVSLNNGAVFEQGN 185

Query: 989  VAKPPNWSS------LGSSRIRASHLQQCPASA--LNSKL----------TVVDIRSSDD 864
             +K P  +        G+S++     Q C  S+  L S++          T        D
Sbjct: 186  PSKVPTPADGEARPRSGTSQLSTLPSQLCQTSSPFLRSRILENIGNSLGHTSTHHAIGGD 245

Query: 863  NVAQEPQCQDVMDRKFQNQE-LASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGL 687
            ++  +     +   K Q Q+ +A C           LMNFSHF RPAAL K  L N + +
Sbjct: 246  SIGVQASDGGLPGIKMQKQDQVAPCNNT-------VLMNFSHFSRPAALVKASLQNISAI 298

Query: 686  QSIEKALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGST------MKTLQGR 525
             SIE+  +  +             S  A+     S     + +F         MKT +  
Sbjct: 299  ASIERIGSKEKGSAASI-------SDPADTTFIDSSIDLQKEKFSQCQPTIVLMKTDRKE 351

Query: 524  NSVEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCS 345
            +  +  ++  T + +    E++T      PS     S +    D  K  E V+ +SSVCS
Sbjct: 352  SKAKSLDEPVTAEPIDAICEENTPKNVKNPSQVTGESASKGLPDGDKTVEPVLAASSVCS 411

Query: 344  ENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKP-PSGRDARTKRSRTAE 168
             N    AS++P +  KRK  D E+S+    SED ++ES+ ++K  P+   + +KRSR AE
Sbjct: 412  GNSVERASDDPVYNLKRKSRDNEESE--CPSEDAEEESVGVKKAVPARGGSGSKRSRAAE 469

Query: 167  VHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            VHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 470  VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 524


>gb|EOY11780.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
            cacao]
          Length = 729

 Score =  173 bits (439), Expect = 1e-40
 Identities = 149/415 (35%), Positives = 206/415 (49%), Gaps = 34/415 (8%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGH 990
            +LQ++Y ++FL E S   VN  STH SN A   R +   Q +R S  V        E G+
Sbjct: 131  SLQSEY-SDFLPELSGVAVNETSTH-SNFASFDRRS---QSIRDSCTVSLNNGAVFEQGN 185

Query: 989  VAKPPNWSS------LGSSRIRASHLQQCPASA--LNSKL----------TVVDIRSSDD 864
             +K P  +        G+S++     Q C  S+  L S++          T        D
Sbjct: 186  PSKVPTPADGEARPRSGTSQLSTLPSQLCQTSSPFLRSRILENIGNSLGHTSTHHAIGGD 245

Query: 863  NVAQEPQCQDVMDRKFQNQE-LASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGL 687
            ++  +     +   K Q Q+ +A C           LMNFSHF RPAAL K  L N + +
Sbjct: 246  SIGVQASDGGLPGIKMQKQDQVAPCNNT-------VLMNFSHFSRPAALVKASLQNISAI 298

Query: 686  QSIEKALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGST------MKTLQGR 525
             SIE+  +  +             S  A+     S     + +F         MKT +  
Sbjct: 299  ASIERIGSKEKGSAASI-------SDPADTTFIDSSIDLQKEKFSQCQPTIVLMKTDRKE 351

Query: 524  NSVEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCS 345
            +  +  ++  T + +    E++T      PS     S +    D  K  E V+ +SSVCS
Sbjct: 352  SKAKSLDEPVTAEPIDAICEENTPKNVKNPSQVTGESASKGLPDGDKTVEPVLAASSVCS 411

Query: 344  ENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKP-PSGRDARTKRSRTAE 168
             N    AS++P +  KRK  D E+S+    SED ++ES+ ++K  P+   + +KRSR AE
Sbjct: 412  GNSVERASDDPVYNLKRKSRDNEESE--CPSEDAEEESVGVKKAVPARGGSGSKRSRAAE 469

Query: 167  VHNLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            VHNLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 470  VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 524


>ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [Fragaria vesca subsp.
            vesca]
          Length = 710

 Score =  172 bits (437), Expect = 2e-40
 Identities = 134/399 (33%), Positives = 201/399 (50%), Gaps = 19/399 (4%)
 Frame = -3

Query: 1142 LQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNN-----VEHGHVAKP 978
            LQ++Y  +F+ E S    N +ST+  N+    + +   Q  R SN      +E  +V+K 
Sbjct: 114  LQHEYSHDFMPEISDVTANEISTN-GNLTPIDKRSSSSQMYRESNTNSTPGLEQRNVSKL 172

Query: 977  PNWSSLGSSRIRASHLQQCPASALNSKLTVVDIRS--------SDDNVAQEPQCQDVMDR 822
             + S+  +SR R S       S+   + ++  +RS        +  + A    C++ +  
Sbjct: 173  SSVSAAEASRPRTSTTHLYQMSSQQPQASIPSLRSIASDMVGGNTSSAAHHAVCKNSIQA 232

Query: 821  K----FQNQELASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGLQSIEKALTPSR 654
                 F    +             T++NFSHF R + L    + N   + +       S 
Sbjct: 233  SPAGGFPGIPMQKQNPPTSSNNNSTIVNFSHFSRSSLLRVEKIKNKDKVSA-----ATSS 287

Query: 653  NPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTM-KTLQGRNSVEFSNKISTGDALR 477
            NP    L+E + G  + +    Q    P  ++   T  K L+  ++ + S   +  +   
Sbjct: 288  NPPESILIESSCGLMKESTSQCQDVMAPSSVDMKPTASKPLEEPHTTKQSEAAAYQEDPS 347

Query: 476  NNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSENITGAASNEPNHGKK 297
             N ++++   + +P  S    +     D+ K  E V+  SSVCS N    AS++P    K
Sbjct: 348  KNDDRNS---NHIPCESAIRPLP----DVEKTTEPVV-DSSVCSVNSVEKASDDPTRVLK 399

Query: 296  RKEYDAEDSDYLSHSEDLQDESINIRKPPS-GRDARTKRSRTAEVHNLSEXXXXXRINEK 120
            RK  D +DS+   HSED+++ES+ ++K  + GR   +KRSR AEVHNLSE     RINEK
Sbjct: 400  RKSRDTDDSE--CHSEDVEEESVGVKKKVAHGRGTGSKRSRAAEVHNLSERRRRDRINEK 457

Query: 119  MRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            MRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 458  MRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 496


>ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
            gi|355480302|gb|AES61505.1| Transcription factor PIF3
            [Medicago truncatula]
          Length = 721

 Score =  172 bits (437), Expect = 2e-40
 Identities = 146/413 (35%), Positives = 207/413 (50%), Gaps = 32/413 (7%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSS--NNVEHGHVAKPPN 972
            +LQ++Y ++F +E +    N L    S      R  G  Q  R S  N+ E  +V+K  +
Sbjct: 128  SLQHEYGSDFFHELTE---NDLPASNSFTLLDKRNNG-NQIFRDSHKNSAEAMNVSKGSS 183

Query: 971  WSSL-GSSRIRASHLQQCPASALNSKLTVVDIRS------SDDNVA---QEPQCQDVMDR 822
               +  ++R +AS  Q  P S+   + T V +RS       ++NV+   Q+    D+   
Sbjct: 184  AEQVVETARHKASASQLYPPSSNQCQTTSVTVRSRASDITENNNVSSGNQDVPYGDITRI 243

Query: 821  KFQNQELASCKXXXXXXXXG----TLMNFSHFIRPAALAKVGLHNA---TGLQSIEK--- 672
               + + +S K              +MNFSHF RPAA+ +  L N    +GL S      
Sbjct: 244  PSSSSDFSSLKAQKQDPVMPGNGSNVMNFSHFARPAAIVRANLQNIGLKSGLNSASARSD 303

Query: 671  --------ALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGSTM-KTLQGRNS 519
                    A + S NP    LV  +    +  ++       P + +      K+L+    
Sbjct: 304  IMGVKNKGAASTSSNPPDSALVNPSGECSKEPEMRCHKVVEPSKADLKPLQPKSLEPNAV 363

Query: 518  VEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCSEN 339
                +K +  +    N +   ++L D  +   AA+         K  E  + SSSVCS N
Sbjct: 364  ATKQSKPACKENGIKNDQPSIQVLGDNGAKGHAAA--------DKGMEVAVASSSVCSGN 415

Query: 338  ITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKPPSGRD-ARTKRSRTAEVH 162
                 S++PN   KRK  D EDS+   HSED++DES+ ++K  +GR  A +KRSR AEVH
Sbjct: 416  GADRGSDDPNRDLKRKSRDTEDSE--CHSEDVEDESVGVKKGAAGRGVAGSKRSRAAEVH 473

Query: 161  NLSEXXXXXRINEKMRALQELIPNCNKVDKASMLEEAIEYLKTLQMQVQIMSM 3
            NLSE     RINEKMRALQELIPNCNKVDKASML+EAIEYLKTLQ+QVQ+MSM
Sbjct: 474  NLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSM 526


>gb|EOY11783.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
            cacao]
          Length = 730

 Score =  169 bits (427), Expect = 3e-39
 Identities = 149/416 (35%), Positives = 206/416 (49%), Gaps = 35/416 (8%)
 Frame = -3

Query: 1145 TLQNDYCAEFLNEFSAFDVNPLSTHRSNVAGTGRTAGLGQEVRSSNNV--------EHGH 990
            +LQ++Y ++FL E S   VN  STH SN A   R +   Q +R S  V        E G+
Sbjct: 131  SLQSEY-SDFLPELSGVAVNETSTH-SNFASFDRRS---QSIRDSCTVSLNNGAVFEQGN 185

Query: 989  VAKPPNWSS------LGSSRIRASHLQQCPASA--LNSKL----------TVVDIRSSDD 864
             +K P  +        G+S++     Q C  S+  L S++          T        D
Sbjct: 186  PSKVPTPADGEARPRSGTSQLSTLPSQLCQTSSPFLRSRILENIGNSLGHTSTHHAIGGD 245

Query: 863  NVAQEPQCQDVMDRKFQNQE-LASCKXXXXXXXXGTLMNFSHFIRPAALAKVGLHNATGL 687
            ++  +     +   K Q Q+ +A C           LMNFSHF RPAAL K  L N + +
Sbjct: 246  SIGVQASDGGLPGIKMQKQDQVAPCNNT-------VLMNFSHFSRPAALVKASLQNISAI 298

Query: 686  QSIEKALTPSRNPVTLTLVERTRGSKEANKVPGQSGSGPHRLEFGST------MKTLQGR 525
             SIE+  +  +             S  A+     S     + +F         MKT +  
Sbjct: 299  ASIERIGSKEKGSAASI-------SDPADTTFIDSSIDLQKEKFSQCQPTIVLMKTDRKE 351

Query: 524  NSVEFSNKISTGDALRNNTEKHTKLLDDLPSSSFAASVALCRHDIRKDPEAVIPSSSVCS 345
            +  +  ++  T + +    E++T      PS     S +    D  K  E V+ +SSVCS
Sbjct: 352  SKAKSLDEPVTAEPIDAICEENTPKNVKNPSQVTGESASKGLPDGDKTVEPVLAASSVCS 411

Query: 344  ENITGAASNEPNHGKKRKEYDAEDSDYLSHSEDLQDESINIRKP-PSGRDARTKRSRTAE 168
             N    AS++P +  KRK  D E+S+    SED ++ES+ ++K  P+   + +KRSR AE
Sbjct: 412  GNSVERASDDPVYNLKRKSRDNEESE--CPSEDAEEESVGVKKAVPARGGSGSKRSRAAE 469

Query: 167  VHNLSEXXXXXRINEKMRALQELIPNCN-KVDKASMLEEAIEYLKTLQMQVQIMSM 3
            VHNLSE     RINEKMRALQELIPNCN KVDKASML+EAIEYLKTLQ+QVQIMSM
Sbjct: 470  VHNLSERRRRDRINEKMRALQELIPNCNKKVDKASMLDEAIEYLKTLQLQVQIMSM 525