BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00007647
         (2462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058413.2| Os06g0688100 [Oryza sativa Japonica Group] g...   568   e-159
gb|EEC81212.1| hypothetical protein OsI_24246 [Oryza sativa Indi...   568   e-159
ref|XP_006656405.1| PREDICTED: RNA polymerase I-specific transcr...   556   e-155
ref|XP_003563455.1| PREDICTED: RNA polymerase I-specific transcr...   542   e-151
ref|XP_006656406.1| PREDICTED: RNA polymerase I-specific transcr...   534   e-149
ref|XP_004966190.1| PREDICTED: RNA polymerase I-specific transcr...   521   e-145
ref|XP_004966189.1| PREDICTED: RNA polymerase I-specific transcr...   507   e-141
gb|AFW69236.1| hypothetical protein ZEAMMB73_457339 [Zea mays]        489   e-135
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              478   e-132
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   471   e-130
gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]     463   e-127
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   463   e-127
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   463   e-127
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   458   e-126
gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [...   457   e-125
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   456   e-125
ref|XP_002437492.1| hypothetical protein SORBIDRAFT_10g028030 [S...   456   e-125
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   454   e-124
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   454   e-124
gb|AFW69235.1| hypothetical protein ZEAMMB73_457339 [Zea mays]        450   e-123

>ref|NP_001058413.2| Os06g0688100 [Oryza sativa Japonica Group]
            gi|52076695|dbj|BAD45608.1| putative RNA polymerase I
            transcription factor RRN3 [Oryza sativa Japonica Group]
            gi|52077031|dbj|BAD46064.1| putative RNA polymerase I
            transcription factor RRN3 [Oryza sativa Japonica Group]
            gi|215704896|dbj|BAG94924.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222636116|gb|EEE66248.1|
            hypothetical protein OsJ_22429 [Oryza sativa Japonica
            Group] gi|255677342|dbj|BAF20327.2| Os06g0688100 [Oryza
            sativa Japonica Group]
          Length = 622

 Score =  568 bits (1465), Expect = e-159
 Identities = 308/617 (49%), Positives = 406/617 (65%), Gaps = 4/617 (0%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG EL+  D  V   +   +SDS+AF  V +V+  VRM P  V   +KE+YD L+++V+ 
Sbjct: 1    MGAELRRDDMEVAEED---ISDSQAFRFVEHVLQSVRMDPFQVDLRDKEEYDSLLSIVDS 57

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             K+   DDEAL+ T LKALS AV ++D +YH +LLNNIF  SIW    D R+ALL LIT 
Sbjct: 58   SKKRSYDDEALLVTTLKALSEAVSKIDIMYHHALLNNIFTMSIWYLNSDTRDALLSLITR 117

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA V D+FL  CL  L++N  PP  L A   Q  RWL RK+E+  +++ +L  I+  VPL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGSLTAFIGQP-RWLARKKEIYSQLHESLRMISDTVPL 176

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            AP  LK +I++ MP+  ++K  ++++VE +L L+ + +G  +G  +LA+VVDLL +LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKMVSFVECMLGLDNDRMGDLIGALLLAKVVDLLTELDVN 236

Query: 1032 IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK-NTFADKLDGLMLVACEH 1208
            I WEDILQ+E NKGIF +EL +  ED++  ++    T  L   N  A+KLDGLM+V CEH
Sbjct: 237  ITWEDILQDEHNKGIFDMELEDLGEDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1209 LKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDI 1388
            LKSC E G L + F+ L  IF+ ++L++HKSKF QF+MFYACSLDP+ CGL+FA+ L+DI
Sbjct: 295  LKSCKEHGRLPQEFDILKTIFRASVLRVHKSKFAQFIMFYACSLDPEICGLEFALFLSDI 354

Query: 1389 FISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISP 1568
            FI K+ED  SRM A++Y+ SYL+RA+FI +  V  ILKRLVDWC +YC LQ++      P
Sbjct: 355  FIKKEEDSISRMSAVSYVGSYLSRARFISADTVVGILKRLVDWCVDYCDLQNNIRITTKP 414

Query: 1569 QADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQ 1748
               ++FY+ CQAVMYILCFRLRSI D P LK  LF++P   IL HP L+PLKVCLP IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKAQLFNMPFGYILTHP-LEPLKVCLPSIVD 473

Query: 1749 EFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNF 1928
            EFLRQA+ ARLF   +   ++++LES+ S  FGG+ RLDMFFPFDPYLLKESDR+MRPNF
Sbjct: 474  EFLRQAKAARLFNASVHSEFEDALESDLSKTFGGMNRLDMFFPFDPYLLKESDRYMRPNF 533

Query: 1929 EFWDMVKTTXXXXXXXXXXXXXXXXXLK-DLG--PSNFPXXXXXXXXXXXXXXXMSITPN 2099
            E+W MVKTT                  + ++G    +                 MSITPN
Sbjct: 534  EYWSMVKTTYNNYNSDVDDELVDLDAPEMNVGSLDDHVEIDLNSDDDLEYSMNKMSITPN 593

Query: 2100 PSFLHQIATNFDQSSQM 2150
             SF HQI  N D    M
Sbjct: 594  RSFFHQIMANSDTGLTM 610


>gb|EEC81212.1| hypothetical protein OsI_24246 [Oryza sativa Indica Group]
          Length = 622

 Score =  568 bits (1465), Expect = e-159
 Identities = 308/617 (49%), Positives = 406/617 (65%), Gaps = 4/617 (0%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG EL+  D  V   +   +SDS+AF  V +V+  VRM P  V   +KE+YD L+++V+ 
Sbjct: 1    MGAELRRDDMEVAEED---ISDSQAFRFVEHVLQSVRMDPFQVDLRDKEEYDSLLSIVDS 57

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             K+   DDEAL+ T LKALS AV ++D +YH +LLNNIF  SIW    D R+ALL LIT 
Sbjct: 58   SKKRSYDDEALLVTTLKALSEAVSKIDIMYHHALLNNIFTMSIWYLNSDTRDALLSLITR 117

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA V D+FL  CL  L++N  PP  L A   Q  RWL RK+E+  +++ +L  I+  VPL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGSLTAFIGQP-RWLARKKEIYSQLHESLRMISDTVPL 176

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            AP  LK +I++ MP+  ++K  ++++VE +L L+ + +G  +G  +LA+VVDLL +LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKMVSFVECMLGLDNDRMGDLIGALLLAKVVDLLTELDVN 236

Query: 1032 IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK-NTFADKLDGLMLVACEH 1208
            I WEDILQ+E NKGIF +EL +  ED++  ++    T  L   N  A+KLDGLM+V CEH
Sbjct: 237  ITWEDILQDEHNKGIFDMELEDLGEDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1209 LKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDI 1388
            LKSC E G L + F+ L  IF+ ++L++HKSKF QF+MFYACSLDP+ CGL+FA+ L+DI
Sbjct: 295  LKSCKEHGRLPQEFDILKTIFRASVLRVHKSKFAQFIMFYACSLDPEICGLEFALFLSDI 354

Query: 1389 FISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISP 1568
            FI K+ED  SRM A++Y+ SYL+RA+FI +  V  ILKRLVDWC +YC LQ++      P
Sbjct: 355  FIKKEEDSISRMSAVSYVGSYLSRARFISADTVVGILKRLVDWCVDYCDLQNNIGITTKP 414

Query: 1569 QADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQ 1748
               ++FY+ CQAVMYILCFRLRSI D P LK  LF++P   IL HP L+PLKVCLP IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKAQLFNMPFGYILTHP-LEPLKVCLPSIVD 473

Query: 1749 EFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNF 1928
            EFLRQA+ ARLF   +   ++++LES+ S  FGG+ RLDMFFPFDPYLLKESDR+MRPNF
Sbjct: 474  EFLRQAKAARLFNASVHSEFEDALESDLSKTFGGMNRLDMFFPFDPYLLKESDRYMRPNF 533

Query: 1929 EFWDMVKTTXXXXXXXXXXXXXXXXXLK-DLG--PSNFPXXXXXXXXXXXXXXXMSITPN 2099
            E+W MVKTT                  + ++G    +                 MSITPN
Sbjct: 534  EYWSMVKTTYNNYNSDVDDELVDLDAPEMNVGSLDDHVEIDLNSDDDLEYSMNKMSITPN 593

Query: 2100 PSFLHQIATNFDQSSQM 2150
             SF HQI  N D    M
Sbjct: 594  RSFFHQIMANSDTGLTM 610


>ref|XP_006656405.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Oryza brachyantha]
          Length = 622

 Score =  556 bits (1432), Expect = e-155
 Identities = 289/549 (52%), Positives = 389/549 (70%), Gaps = 1/549 (0%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG EL+  D  V   E+  +SDS+AF  V +V+  VRM P LV   +K+QYD L+ +V+ 
Sbjct: 1    MGAELRPDDMEV---EEEGVSDSQAFRFVEHVLQSVRMDPVLVDLKDKDQYDSLLKIVDS 57

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             K+   DDEAL+   LKALS AV ++D  YH  LL+NIF  ++W    D R+ALLELIT 
Sbjct: 58   SKKRSFDDEALLVPTLKALSEAVSKIDITYHHELLSNIFTMTLWYMQRDTRDALLELITR 117

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA V D+FL  CL  L++N  PP  L A   Q  RW  RK+E+  +++ +L  I+  +PL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGPLTAFIGQP-RWHARKKEIYSQLHESLRVISDTIPL 176

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            AP  LK +I++ MP+  ++K   +++VE IL L+ + +G  +G  +LA+VVDLL +LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKTISFVECILGLDNDRMGDLIGSLLLAKVVDLLTELDVN 236

Query: 1032 IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK-NTFADKLDGLMLVACEH 1208
            I WEDILQEE +KGIF +EL + ++D++  ++    T  L   N  A+KLDGLM+V CEH
Sbjct: 237  ITWEDILQEEHHKGIFDMELEDLDDDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1209 LKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDI 1388
            LK+CSE G LL+ F+ L  IF+ ++L +HKSKF QF++FYACSLDP+ CG++F++ LTDI
Sbjct: 295  LKACSEHGRLLKEFDILKTIFRTSVLTVHKSKFAQFIVFYACSLDPEICGIEFSLFLTDI 354

Query: 1389 FISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISP 1568
            FI K+ED  SRM A++Y+ SYL+RA+FI +  V ++LKRLVDWC +YC LQ++      P
Sbjct: 355  FIKKEEDLLSRMSAVSYVGSYLSRARFISADTVVAVLKRLVDWCVDYCDLQNNKGIITKP 414

Query: 1569 QADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQ 1748
               ++FY+ CQAVMYILCFRLRSI D P LK  LF++P   IL HP L+PLKVCLP+IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKSQLFNMPFGYILTHP-LEPLKVCLPVIVD 473

Query: 1749 EFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNF 1928
            EFLRQA+ ARLF   M+ +++++LES+ S  FGGI RLDMFFPFDPYLLKESDR++RPNF
Sbjct: 474  EFLRQAKAARLFNASMSSAFEDALESDLSRTFGGIDRLDMFFPFDPYLLKESDRYIRPNF 533

Query: 1929 EFWDMVKTT 1955
            EFW  VKTT
Sbjct: 534  EFWSRVKTT 542


>ref|XP_003563455.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Brachypodium distachyon]
          Length = 622

 Score =  542 bits (1397), Expect = e-151
 Identities = 287/598 (47%), Positives = 390/598 (65%), Gaps = 4/598 (0%)
 Frame = +3

Query: 369  LSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKAL 548
            +SD+ AF  V +V+  V M P LV  S++EQYD L+ +++  K+   DDEAL+ T LKAL
Sbjct: 17   ISDTAAFRMVEHVLQSVSMDPFLVDPSDREQYDILLNILDAVKKRSLDDEALLVTTLKAL 76

Query: 549  SRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITTLATVPDKFLDNCLYTLLHN 728
            S AV ++D +YH  LLNNIF   IW +  D R+A L+LIT LA V DK+L  CL  +++N
Sbjct: 77   SEAVSKIDMMYHYILLNNIFGMCIWFFQRDTRDAYLDLITRLAAVADKYLRECLQVVVNN 136

Query: 729  LRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTED 908
              PP  L  P+ +  RW+ RK+E+  +++  L  I+  VPLAP  LK +I++ MP+  ++
Sbjct: 137  FTPPGPL-VPYMEQPRWIARKKEIYFQLHECLKTISDTVPLAPRMLKDIIDRSMPKLFDN 195

Query: 909  KYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIE 1088
            K  ++++VE ++ L+ + +G  +G  +LA+VVDLL +LDVNI  EDI QEE NKGIF +E
Sbjct: 196  KAKMVSFVECMMGLDTDRMGDLIGALLLAKVVDLLTELDVNITLEDINQEEHNKGIFDME 255

Query: 1089 LGECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEI 1268
            L + +ED++         L L  N  A+KLDGLM+V CEHLKSC+E G+L + F+ L  I
Sbjct: 256  LEDLDEDEDGFGQEGTKVL-LGGNACAEKLDGLMVVVCEHLKSCAEHGYLTKEFDTLKTI 314

Query: 1269 FQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLAS 1448
            F+ ++L++HKSKF QF+MFYACSLDP+ CGL+FAI LTD F  K+EDP SRM A++Y+ S
Sbjct: 315  FRASLLRVHKSKFAQFIMFYACSLDPEICGLEFAIFLTDTFTKKEEDPISRMSAVSYVGS 374

Query: 1449 YLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISPQADRVFYSGCQAVMYILCFR 1628
            YL+RA+FI +  V  ILKRLV+WC EYC LQ+     I+    ++FY+ CQAVMY+LCFR
Sbjct: 375  YLSRARFISADTVVGILKRLVEWCVEYCDLQNK-RGTIAKPNHQIFYATCQAVMYVLCFR 433

Query: 1629 LRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQAQTARLFKKPMAYSY 1808
            LRSI D P LK  LFH+P   +L HP L+PLKVCLP IV EFLRQA+ A LF   +  ++
Sbjct: 434  LRSIMDYPNLKSELFHMPFGFLLTHP-LEPLKVCLPSIVNEFLRQAKPAGLFTAFVDPAF 492

Query: 1809 DNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDMVKTTXXXXXXXXXXX 1988
            ++++ES+ S  FGG+ RLD+FFPFDPYLLKESDR++RPNFE+W MVKTT           
Sbjct: 493  EDAIESDLSRTFGGVNRLDVFFPFDPYLLKESDRYIRPNFEYWSMVKTTYSNDNGDDDDD 552

Query: 1989 XXXXXXLKDLG----PSNFPXXXXXXXXXXXXXXXMSITPNPSFLHQIATNFDQSSQM 2150
                             +                 MSITP+  F H +ATN D    M
Sbjct: 553  ELGDIDAPGTNVGSLDDDVEIDMNSDDGLEYSMNKMSITPHRPFYHPMATNGDSGLSM 610


>ref|XP_006656406.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Oryza brachyantha]
          Length = 597

 Score =  534 bits (1375), Expect = e-149
 Identities = 272/510 (53%), Positives = 366/510 (71%), Gaps = 1/510 (0%)
 Frame = +3

Query: 429  PSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIF 608
            P LV   +K+QYD L+ +V+  K+   DDEAL+   LKALS AV ++D  YH  LL+NIF
Sbjct: 12   PVLVDLKDKDQYDSLLKIVDSSKKRSFDDEALLVPTLKALSEAVSKIDITYHHELLSNIF 71

Query: 609  MSSIWDYGLDARNALLELITTLATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMR 788
              ++W    D R+ALLELIT LA V D+FL  CL  L++N  PP  L A   Q  RW  R
Sbjct: 72   TMTLWYMQRDTRDALLELITRLAAVADQFLRECLQMLVNNFTPPGPLTAFIGQP-RWHAR 130

Query: 789  KEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIG 968
            K+E+  +++ +L  I+  +PLAP  LK +I++ MP+  ++K   +++VE IL L+ + +G
Sbjct: 131  KKEIYSQLHESLRVISDTIPLAPRMLKDIIDRSMPKLFDNKAKTISFVECILGLDNDRMG 190

Query: 969  KFLGRTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLG 1148
              +G  +LA+VVDLL +LDVNI WEDILQEE +KGIF +EL + ++D++  ++    T  
Sbjct: 191  DLIGSLLLAKVVDLLTELDVNITWEDILQEEHHKGIFDMELEDLDDDED--SLGQEGTKA 248

Query: 1149 LVK-NTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMF 1325
            L   N  A+KLDGLM+V CEHLK+CSE G LL+ F+ L  IF+ ++L +HKSKF QF++F
Sbjct: 249  LFGGNACAEKLDGLMVVFCEHLKACSEHGRLLKEFDILKTIFRTSVLTVHKSKFAQFIVF 308

Query: 1326 YACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKR 1505
            YACSLDP+ CG++F++ LTDIFI K+ED  SRM A++Y+ SYL+RA+FI +  V ++LKR
Sbjct: 309  YACSLDPEICGIEFSLFLTDIFIKKEEDLLSRMSAVSYVGSYLSRARFISADTVVAVLKR 368

Query: 1506 LVDWCFEYCQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPV 1685
            LVDWC +YC LQ++      P   ++FY+ CQAVMYILCFRLRSI D P LK  LF++P 
Sbjct: 369  LVDWCVDYCDLQNNKGIITKPINHQIFYASCQAVMYILCFRLRSIMDYPNLKSQLFNMPF 428

Query: 1686 DSILHHPVLDPLKVCLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLD 1865
              IL HP L+PLKVCLP+IV EFLRQA+ ARLF   M+ +++++LES+ S  FGGI RLD
Sbjct: 429  GYILTHP-LEPLKVCLPVIVDEFLRQAKAARLFNASMSSAFEDALESDLSRTFGGIDRLD 487

Query: 1866 MFFPFDPYLLKESDRFMRPNFEFWDMVKTT 1955
            MFFPFDPYLLKESDR++RPNFEFW  VKTT
Sbjct: 488  MFFPFDPYLLKESDRYIRPNFEFWSRVKTT 517


>ref|XP_004966190.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Setaria italica]
          Length = 618

 Score =  521 bits (1343), Expect = e-145
 Identities = 275/596 (46%), Positives = 382/596 (64%), Gaps = 3/596 (0%)
 Frame = +3

Query: 372  SDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKALS 551
            SDS  F  V +V+  VRM P L+   +K+ YD+L+  V+P K+  +D+ A++ T LKALS
Sbjct: 15   SDSHMFRQVQHVLQSVRMDPFLIDLRDKDHYDFLLLAVDPTKKRSKDEMAVLVTILKALS 74

Query: 552  RAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITTLATVPDKFLDNCLYTLLHNL 731
             AV ++D +YH +LL+NIF + IW   LD R+ALL LIT LA V D++L  CL  L++N 
Sbjct: 75   EAVSKIDVMYHHALLHNIFTTCIWYLDLDTRDALLHLITRLAAVADQYLRECLQMLVNNF 134

Query: 732  RPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTEDK 911
             PP     P  +  R L +K+E+  +++  L  I+  VPLA   LK ++ + MP+  ++K
Sbjct: 135  TPPGPY-VPLMEQPRMLAKKKEIYSQLHETLKMISDTVPLASRMLKDVLNRSMPKLFDNK 193

Query: 912  YVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIEL 1091
              ++++VE +L L+ + +G  +G T+  +VVDLL +LDVNI WEDILQEE NKGIF +EL
Sbjct: 194  AKMLSFVECMLGLDTDRLGDLIGTTLFEKVVDLLTELDVNITWEDILQEEHNKGIFDMEL 253

Query: 1092 GECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIF 1271
             + ++DD+         L    N  A+KLDGLM+V CEHLKSC+    L + F  L  IF
Sbjct: 254  EDLDDDDDNFGQEGTKAL-FGGNVCAEKLDGLMVVVCEHLKSCNRD-RLFKEFGILKTIF 311

Query: 1272 QRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASY 1451
            ++++LK+HKSKF QF+MFYACSLDP+ CG+ FA+ LTDIF  K++DP +RM A++Y+ SY
Sbjct: 312  RKSVLKVHKSKFAQFIMFYACSLDPEICGVDFALFLTDIFTKKEDDPIARMSAVSYVGSY 371

Query: 1452 LARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNK---ISPQADRVFYSGCQAVMYILC 1622
            L+RA+FI +  V ++LKRLV+WC +Y +     VN+     P+  ++FY+ CQAVMY+LC
Sbjct: 372  LSRARFISADTVVAVLKRLVEWCIDYIKRDRDPVNQAKATKPKDHQIFYASCQAVMYVLC 431

Query: 1623 FRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQAQTARLFKKPMAY 1802
            FRLRSI D P LK  LF +P++SIL    L+PLKVCLP IV EFLRQ++ ARLF   +  
Sbjct: 432  FRLRSIMDYPNLKSQLFQMPIESIL-MDTLEPLKVCLPSIVNEFLRQSRAARLFNASVDL 490

Query: 1803 SYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDMVKTTXXXXXXXXX 1982
              ++ +ES+ S AFGG  RLDMFFPFDPYLL+ESDR++RPNFEFW +VKTT         
Sbjct: 491  PLEDIVESDLSKAFGGPNRLDMFFPFDPYLLRESDRYIRPNFEFWSLVKTTYSDGEDDEL 550

Query: 1983 XXXXXXXXLKDLGPSNFPXXXXXXXXXXXXXXXMSITPNPSFLHQIATNFDQSSQM 2150
                      D    +                 MSITP+ SF H +A + D    M
Sbjct: 551  GDLDAPGMNVDSLDDHVEIDLNDDEGIEYSMNKMSITPHRSFYHPMAMSSDSGLSM 606


>ref|XP_004966189.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Setaria italica]
          Length = 644

 Score =  507 bits (1306), Expect = e-141
 Identities = 275/622 (44%), Positives = 382/622 (61%), Gaps = 29/622 (4%)
 Frame = +3

Query: 372  SDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMATALKALS 551
            SDS  F  V +V+  VRM P L+   +K+ YD+L+  V+P K+  +D+ A++ T LKALS
Sbjct: 15   SDSHMFRQVQHVLQSVRMDPFLIDLRDKDHYDFLLLAVDPTKKRSKDEMAVLVTILKALS 74

Query: 552  RAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITTLATVPDKFLDNCLYTLLHNL 731
             AV ++D +YH +LL+NIF + IW   LD R+ALL LIT LA V D++L  CL  L++N 
Sbjct: 75   EAVSKIDVMYHHALLHNIFTTCIWYLDLDTRDALLHLITRLAAVADQYLRECLQMLVNNF 134

Query: 732  RPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMPRFTEDK 911
             PP     P  +  R L +K+E+  +++  L  I+  VPLA   LK ++ + MP+  ++K
Sbjct: 135  TPPGPY-VPLMEQPRMLAKKKEIYSQLHETLKMISDTVPLASRMLKDVLNRSMPKLFDNK 193

Query: 912  YVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVNIPWEDILQEEPNKGIFAIEL 1091
              ++++VE +L L+ + +G  +G T+  +VVDLL +LDVNI WEDILQEE NKGIF +EL
Sbjct: 194  AKMLSFVECMLGLDTDRLGDLIGTTLFEKVVDLLTELDVNITWEDILQEEHNKGIFDMEL 253

Query: 1092 GECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIF 1271
             + ++DD+         L    N  A+KLDGLM+V CEHLKSC+    L + F  L  IF
Sbjct: 254  EDLDDDDDNFGQEGTKAL-FGGNVCAEKLDGLMVVVCEHLKSCNRD-RLFKEFGILKTIF 311

Query: 1272 QRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASY 1451
            ++++LK+HKSKF QF+MFYACSLDP+ CG+ FA+ LTDIF  K++DP +RM A++Y+ SY
Sbjct: 312  RKSVLKVHKSKFAQFIMFYACSLDPEICGVDFALFLTDIFTKKEDDPIARMSAVSYVGSY 371

Query: 1452 LARAKFIPSSLVASILK--------------------------RLVDWCFEYCQLQDSWV 1553
            L+RA+FI +  V ++LK                          RLV+WC +Y +     V
Sbjct: 372  LSRARFISADTVVAVLKRWLHSEHRLCMFYAFIHLRFMFYLLHRLVEWCIDYIKRDRDPV 431

Query: 1554 NK---ISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLK 1724
            N+     P+  ++FY+ CQAVMY+LCFRLRSI D P LK  LF +P++SIL    L+PLK
Sbjct: 432  NQAKATKPKDHQIFYASCQAVMYVLCFRLRSIMDYPNLKSQLFQMPIESIL-MDTLEPLK 490

Query: 1725 VCLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKES 1904
            VCLP IV EFLRQ++ ARLF   +    ++ +ES+ S AFGG  RLDMFFPFDPYLL+ES
Sbjct: 491  VCLPSIVNEFLRQSRAARLFNASVDLPLEDIVESDLSKAFGGPNRLDMFFPFDPYLLRES 550

Query: 1905 DRFMRPNFEFWDMVKTTXXXXXXXXXXXXXXXXXLKDLGPSNFPXXXXXXXXXXXXXXXM 2084
            DR++RPNFEFW +VKTT                   D    +                 M
Sbjct: 551  DRYIRPNFEFWSLVKTTYSDGEDDELGDLDAPGMNVDSLDDHVEIDLNDDEGIEYSMNKM 610

Query: 2085 SITPNPSFLHQIATNFDQSSQM 2150
            SITP+ SF H +A + D    M
Sbjct: 611  SITPHRSFYHPMAMSSDSGLSM 632


>gb|AFW69236.1| hypothetical protein ZEAMMB73_457339 [Zea mays]
          Length = 620

 Score =  489 bits (1260), Expect = e-135
 Identities = 280/621 (45%), Positives = 382/621 (61%), Gaps = 11/621 (1%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG E QGY+   G   D     SE F  V  V+  VRM P L+   +K+ YDY++ +++P
Sbjct: 1    MGAE-QGYEDMQGTFRD-----SEVFEFVGKVLQSVRMDPFLIDIRDKDYYDYMLGIIDP 54

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             K+   DDEA+  T L+ALS+AV ++D VYH +LL+NIF   +W    D R   L+LIT 
Sbjct: 55   TKKRSTDDEAMFVTILRALSQAVSKIDTVYHHALLHNIFTMCVWHLHSDTRVVFLDLITR 114

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA V D++L  CL  L++N  PP  L   + +  RWL +KE++  ++  +L  I+  VPL
Sbjct: 115  LAAVADQYLRECLQMLVNNFTPPGPL-IRYIEEPRWLPKKEKIYSQLQESLKMISDTVPL 173

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            AP  LK +I++ MP+  + K  ++++V+ +L L+   +   +G ++L +VV LL +LDVN
Sbjct: 174  APRMLKDIIDRSMPKLFDSKAKMVSFVKCMLGLDA-VVWDIIGSSLLEKVVYLLTELDVN 232

Query: 1032 IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK----NTFADKLDGLMLVA 1199
            I WEDILQ+E NKGIF +EL +  ED++     N+   G       N  A+KLDGLM+V 
Sbjct: 233  ITWEDILQDEHNKGIFDMELEDLAEDED-----NLGQEGTKVHFGGNMCAEKLDGLMVVV 287

Query: 1200 CEHLKS-CSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIM 1376
            CEHLKS   E   L++ F  L  IF+  +L++HKSKF QF+MFYACSL P+  G  FA  
Sbjct: 288  CEHLKSRVEEPERLIKEFVTLKAIFKSHVLRVHKSKFAQFIMFYACSLHPEI-GDGFANF 346

Query: 1377 LTDIFISKDEDPDS--RMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSW 1550
            LTDIFI KD++ D+  R+ A++Y+ SYL+RA+FI  ++V S+LKRLVDWC  YC  Q   
Sbjct: 347  LTDIFIDKDKNEDAITRVSAVSYVGSYLSRARFISVNIVVSVLKRLVDWCDYYCGHQLDN 406

Query: 1551 VNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVC 1730
                +P   ++FY+ CQAVMY+LCFRLRSI D P LKQ LF + +  IL HP L PLKVC
Sbjct: 407  GVTANPIKHQLFYASCQAVMYVLCFRLRSIMDYPNLKQQLFRMRIRDILVHP-LQPLKVC 465

Query: 1731 LPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDR 1910
            LP IV EFLRQA  A LF  P    +++++ES+ S AFGG+ RLDMFFPFDPYLLKESDR
Sbjct: 466  LPSIVNEFLRQATAASLFHAPAISMHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDR 525

Query: 1911 FMRPNFEFWDMVKTTXXXXXXXXXXXXXXXXXLKDLG----PSNFPXXXXXXXXXXXXXX 2078
            ++RPNFEFW +VKTT                    +       +F               
Sbjct: 526  YIRPNFEFWSLVKTTYSNDNSDEDDEELGDIDAPGMNVGSLDDHFEIDFNSDDDIEYKMN 585

Query: 2079 XMSITPNPSFLHQIATNFDQS 2141
             MSITP  +F H +ATN + +
Sbjct: 586  KMSITPQRTFYHPLATNSESN 606


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  478 bits (1230), Expect = e-132
 Identities = 263/555 (47%), Positives = 359/555 (64%), Gaps = 7/555 (1%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MGVEL         +E+   SDSE       ++  VR A   VP  + + YD L+ V++ 
Sbjct: 1    MGVELATDRAGFHEMEEVNFSDSE-------LVYHVRHALQSVPLGDSDSYDQLIGVLHH 53

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             +R+  D+ AL+ T+LKALS AV  +D V+H SLL++IF  S+W+YG D  +ALLELI +
Sbjct: 54   KERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILS 113

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA     +LD  L  L+ N  PP  L   F +  R L RK++V   V+  L  I  LVPL
Sbjct: 114  LAASSGNYLDCSLDMLVSNFMPPYSL-LDFLKQPRGLARKDQVLSRVHSTLKDIADLVPL 172

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            AP+RL  ++ + MP     + ++M YVE +L LE   I + +G  +L  ++D L+DLDV 
Sbjct: 173  APSRLVPIVIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVE 232

Query: 1032 IPWEDILQEEPNKGIFAIELGECNE-------DDEYTTIPNMDTLGLVKNTFADKLDGLM 1190
            I WE++LQ++ +KGIF +EL +  E       D       ++    L  N  A+KLD LM
Sbjct: 233  IAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLM 292

Query: 1191 LVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFA 1370
            ++  EHL+SC   G L+EVFE L   FQ  +L   KSKF QF+MFYAC+LDP+ CG++FA
Sbjct: 293  VLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFA 352

Query: 1371 IMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSW 1550
             +L D F+     P +RM A+AYLASYL+R KF+ +S VA+IL+RLV WC EYC++ D  
Sbjct: 353  RVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGD 412

Query: 1551 VNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVC 1730
            +N   P+A +VFYSGCQA+MY+LCFR+RS+ +VP L+  L  LP+++IL HP L PLKVC
Sbjct: 413  IN---PKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHP-LSPLKVC 468

Query: 1731 LPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDR 1910
            LP IV+EFLRQA+ ARLF     + + + LESE S AFGGI+RLDMFFPFDP LLK+ DR
Sbjct: 469  LPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDR 528

Query: 1911 FMRPNFEFWDMVKTT 1955
            F+RPNF +W M++TT
Sbjct: 529  FIRPNFVYWSMIRTT 543


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  471 bits (1213), Expect = e-130
 Identities = 264/564 (46%), Positives = 361/564 (64%), Gaps = 16/564 (2%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MGVEL         +E+   SDSE       ++  VR A   VP  + + YD L+ V++ 
Sbjct: 1    MGVELATDRAGFHEMEEVNFSDSE-------LVYHVRHALQSVPLGDSDSYDQLIGVLHH 53

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             +R+  D+ AL+ T+LKALS AV  +D V+H SLL++IF  S+W+YG D  +ALLELI +
Sbjct: 54   KERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILS 113

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA     +LD  L  L+ N  PP  L   F +  R L RK++V   V+  L  I  LVPL
Sbjct: 114  LAASSGNYLDCSLDMLVSNFMPPYSL-LDFLKQPRGLARKDQVLSRVHSTLKDIADLVPL 172

Query: 852  APARLKILIEKCMPR-FTEDK--------YVLMTYVEGILELERNEIGKFLGRTVLARVV 1004
            AP+RL  ++ + MP  FT++         + +  YVE +L LE   I + +G  +L  ++
Sbjct: 173  APSRLVPIVIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGGAIRELVGNMMLVALM 232

Query: 1005 DLLIDLDVNIPWEDILQEEPNKGIFAIELGECNE-------DDEYTTIPNMDTLGLVKNT 1163
            D L+DLDV I WE++LQ++ +KGIF +EL +  E       D       ++    L  N 
Sbjct: 233  DRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNL 292

Query: 1164 FADKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLD 1343
             A+KLD LM++  EHL+SC   G L+EVFE L   FQ  +L   KSKF QF+MFYAC+LD
Sbjct: 293  IAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALD 352

Query: 1344 PDTCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCF 1523
            P+ CG++FA +L D F+     P +RM A+AYLASYL+R KF+ +S VA+IL+RLV WC 
Sbjct: 353  PENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCL 412

Query: 1524 EYCQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHH 1703
            EYC++ D  +N   P+A +VFYSGCQA+MY+LCFR+RS+ +VP L+  L  LP+++IL H
Sbjct: 413  EYCKIHDGDIN---PKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKH 469

Query: 1704 PVLDPLKVCLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFD 1883
            P L PLKVCLP IV+EFLRQA+ ARLF     + + + LESE S AFGGI+RLDMFFPFD
Sbjct: 470  P-LSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFD 528

Query: 1884 PYLLKESDRFMRPNFEFWDMVKTT 1955
            P LLK+ DRF+RPNF +W M++TT
Sbjct: 529  PCLLKKCDRFIRPNFVYWSMIRTT 552


>gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
          Length = 616

 Score =  463 bits (1192), Expect = e-127
 Identities = 256/554 (46%), Positives = 359/554 (64%), Gaps = 6/554 (1%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MGVEL+  +     ++D   +D +    V + +  V M  S       ++Y+ LV V++ 
Sbjct: 1    MGVELRNGEAGFHELDDADFTDYDLVYHVRDALTSVSMGDS-------DKYNELVAVMHH 53

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
               +  D+ AL+ T+LKALS AV  +D+V H SLL++IF  ++W+Y  D  +ALLELI +
Sbjct: 54   RGPLAPDEVALLVTSLKALSGAVSYIDSVLHESLLSSIFSMNMWNYRPDVMDALLELIIS 113

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA     ++D+CL  L+ N  PP+       Q  R + RK++V   V+ +L  +  LVPL
Sbjct: 114  LAASNGTYIDSCLDMLVGNFTPPNYFTDMLKQP-RGIARKDQVLSRVHSSLKVLADLVPL 172

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            +P RL  +I +  P +   + +L+ YVE +L+LE    G+ +G  +L+ +VDLL+DLDV 
Sbjct: 173  SPMRLLPIIIQRKPHYCSKEIILVIYVENMLKLESGIFGELVGSAMLSGLVDLLLDLDVE 232

Query: 1032 IPWEDILQEEPNKGIFAIELGECNED--DEYTT---IPN-MDTLGLVKNTFADKLDGLML 1193
            I W+DILQ+E  KGIF++EL + +ED  DE      +P  +    LV N FA KLD LM+
Sbjct: 233  IGWDDILQDESAKGIFSMELEDVDEDIDDELMDGGELPRELSRKSLVGNLFARKLDSLMV 292

Query: 1194 VACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAI 1373
            +  EHL+SC     L+EVFE L + FQ+ +L  +KSKF+QF+MFYAC+LDP+ CG++FA 
Sbjct: 293  LIFEHLESCEVGRRLVEVFETLLQPFQKTVLTAYKSKFSQFVMFYACALDPENCGVRFAN 352

Query: 1374 MLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWV 1553
            ML D FIS    P  RM A+AYLASYL+R KF+ +SL+A  LKRLVDWC +YC +Q+   
Sbjct: 353  MLGDTFISNSHPPLLRMSAVAYLASYLSRGKFLSTSLIADTLKRLVDWCLDYCTIQE--- 409

Query: 1554 NKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCL 1733
             +I+P+A R+FYSGCQA+MY LCFR+RSI  VP  K  L  +P++ IL H  L PLKVCL
Sbjct: 410  GEINPKAHRIFYSGCQAIMYALCFRMRSIMGVPWFKSQLL-MPINLILSHK-LSPLKVCL 467

Query: 1734 PLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRF 1913
            P IV EFLRQ++ A LF     +++D+ LESE S  FGG++RLDMFFPFDP LLK  D F
Sbjct: 468  PSIVTEFLRQSKAAGLFITSERFNFDDYLESELSKGFGGMERLDMFFPFDPCLLKRCDSF 527

Query: 1914 MRPNFEFWDMVKTT 1955
            +RP + +W MV+ T
Sbjct: 528  IRPYYVYWSMVRPT 541


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  463 bits (1192), Expect = e-127
 Identities = 258/561 (45%), Positives = 363/561 (64%), Gaps = 13/561 (2%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG EL+     +  +ED  L+D    A +++ I G   + SL    + + Y+ LV V++ 
Sbjct: 1    MGAELENNQAQLHAMEDVNLTD----AQLVDFIRGFLSSVSL---GDIDGYNQLVGVIHH 53

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
              R+  D+ AL+ T LKALS AV  +D + H SLL  IF  S+WDYG +  +AL+ELI +
Sbjct: 54   RDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIIS 113

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSR----LKAPFNQSKRWLMRKEEVRREVYLALNCINT 839
            LA    K++D+CL  L++N  PP+     LK P       L RKEEV   V+ AL  I+ 
Sbjct: 114  LAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHG-----LTRKEEVLSRVHTALKDISD 168

Query: 840  LVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLID 1019
            LVPLAP RL+  +   M R   ++ +   YVE +L LE+  + +F+GR +L  +VD L+D
Sbjct: 169  LVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLD 228

Query: 1020 LDVNIPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK---------NTFAD 1172
            LDV I W+DILQ++ +KGIF +EL    +DD+ T   N D+  L +         N  A+
Sbjct: 229  LDVEIGWDDILQDDFSKGIFEMEL---EDDDDTTDDINEDSSELPRELSRRSLGGNVIAE 285

Query: 1173 KLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDT 1352
             LD L+++  EHL+SC   G L EVF+ L   FQR +L  +KSKF QF++FYACSLDP+ 
Sbjct: 286  TLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEV 345

Query: 1353 CGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYC 1532
            CG +FAI L D+F+S ++ P  RM A++YLAS+L+R KF+ +SLV +ILKRLVDWC EY 
Sbjct: 346  CGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG 405

Query: 1533 QLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVL 1712
            +  +   N   P+A +VFYSGCQA+MY+LCFR+RSI ++P+LK  L  +P+  +L H  L
Sbjct: 406  KTLNVDPN---PKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHR-L 461

Query: 1713 DPLKVCLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYL 1892
             PLKVCLP IV+EFLRQA+ A LF     + ++  LES++S +FGG++RLDMFFPFDP L
Sbjct: 462  SPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCL 521

Query: 1893 LKESDRFMRPNFEFWDMVKTT 1955
            LK+ DR++RP+F +W MV+ T
Sbjct: 522  LKKCDRYLRPHFVYWSMVRPT 542


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  463 bits (1192), Expect = e-127
 Identities = 258/561 (45%), Positives = 363/561 (64%), Gaps = 13/561 (2%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG EL+     +  +ED  L+D    A +++ I G   + SL    + + Y+ LV V++ 
Sbjct: 1    MGAELENNQAQLHAMEDVNLTD----AQLVDFIRGFLSSVSL---GDIDGYNQLVGVIHH 53

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
              R+  D+ AL+ T LKALS AV  +D + H SLL  IF  S+WDYG +  +AL+ELI +
Sbjct: 54   RDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIIS 113

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSR----LKAPFNQSKRWLMRKEEVRREVYLALNCINT 839
            LA    K++D+CL  L++N  PP+     LK P       L RKEEV   V+ AL  I+ 
Sbjct: 114  LAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHG-----LTRKEEVLSRVHTALKDISD 168

Query: 840  LVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLID 1019
            LVPLAP RL+  +   M R   ++ +   YVE +L LE+  + +F+GR +L  +VD L+D
Sbjct: 169  LVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLD 228

Query: 1020 LDVNIPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK---------NTFAD 1172
            LDV I W+DILQ++ +KGIF +EL    +DD+ T   N D+  L +         N  A+
Sbjct: 229  LDVEIGWDDILQDDFSKGIFEMEL---EDDDDTTDDINEDSSELPRELSRRSLGGNVIAE 285

Query: 1173 KLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDT 1352
             LD L+++  EHL+SC   G L EVF+ L   FQR +L  +KSKF QF++FYACSLDP+ 
Sbjct: 286  TLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEV 345

Query: 1353 CGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYC 1532
            CG +FAI L D+F+S ++ P  RM A++YLAS+L+R KF+ +SLV +ILKRLVDWC EY 
Sbjct: 346  CGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG 405

Query: 1533 QLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVL 1712
            +  +   N   P+A +VFYSGCQA+MY+LCFR+RSI ++P+LK  L  +P+  +L H  L
Sbjct: 406  KTLNVDPN---PKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHR-L 461

Query: 1713 DPLKVCLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYL 1892
             PLKVCLP IV+EFLRQA+ A LF     + ++  LES++S +FGG++RLDMFFPFDP L
Sbjct: 462  SPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCL 521

Query: 1893 LKESDRFMRPNFEFWDMVKTT 1955
            LK+ DR++RP+F +W MV+ T
Sbjct: 522  LKKCDRYLRPHFVYWSMVRPT 542


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  458 bits (1179), Expect = e-126
 Identities = 259/561 (46%), Positives = 361/561 (64%), Gaps = 14/561 (2%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MGVEL         +ED  +SD E       ++  VR A + V   + + Y+ LV V++ 
Sbjct: 1    MGVELPIDHAESHEMEDVNISDLE-------LVYHVREALTSVQSGDNDNYNQLVAVMHL 53

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
              R+  D+ AL+ T+LKALS AV  +D  +H SLL +IF  S+W+Y  D  +AL  LI +
Sbjct: 54   SGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDVMDALKGLIIS 113

Query: 672  LATVPDKFLDNCLYTLLHNLRPPS----RLKAPFNQSKRWLMRKEEVRREVYLALNCINT 839
            LA    K++D+CL  L+ N  PPS    +LK P       L RK +V   V+ AL  I  
Sbjct: 114  LAASNGKYVDSCLTMLVSNFTPPSYFLDKLKEPHG-----LERKHQVLSRVHAALKSIFD 168

Query: 840  LVPLAPARLKILIEKCMPRFT---EDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDL 1010
            LVPLAP RL  ++ + MP      E   +++ Y E +L+LE + +G+ +  T+L  VVD 
Sbjct: 169  LVPLAPTRLLPIVVQRMPTVHNKHERLKMIVVYTENMLKLESSAMGELVRSTLLMAVVDR 228

Query: 1011 LIDLDVNIPWEDILQEEPNKGIFAIELGECNE--DDEYTT---IPN--MDTLGLVKNTFA 1169
            LIDLD+ I W+DIL ++ +KGIF +EL +  E  DD       +P+  +    L  N  A
Sbjct: 229  LIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSLSRKSLSGNLIA 288

Query: 1170 DKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPD 1349
            + LD LM++  EHL+SC  +G L+EVFE L + FQ  +L  +KSKF QF+MFYAC+LDP+
Sbjct: 289  ELLDSLMVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPE 348

Query: 1350 TCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEY 1529
             CGL+FA ML D+F+S    P +RM A++YLAS+L+RA+F+    + S+LKRLVDWC EY
Sbjct: 349  NCGLRFATMLADVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEY 408

Query: 1530 CQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPV 1709
            C +    +N   P+A RVFYSGCQA+MY+LCFR+RSI D+P+LK  L  +P++++L H  
Sbjct: 409  CNILGGDIN---PKAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQLLLMPLETVLKHD- 464

Query: 1710 LDPLKVCLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPY 1889
            L+PLKVCLP +V EFL+Q++ ARLF     + +++ LESE S AFGG++RLDMFFPFDP 
Sbjct: 465  LNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFNDLLESELSRAFGGLERLDMFFPFDPC 524

Query: 1890 LLKESDRFMRPNFEFWDMVKT 1952
            LLK+SD F+RPNF +W MVKT
Sbjct: 525  LLKKSDSFIRPNFVYWSMVKT 545


>gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
            gi|508698705|gb|EOX90601.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698706|gb|EOX90602.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  457 bits (1175), Expect = e-125
 Identities = 254/556 (45%), Positives = 353/556 (63%), Gaps = 8/556 (1%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG+EL  Y     + ED +++ +++      +++ V+ A + V   +   Y+ LV V++ 
Sbjct: 1    MGLELPKYP---EMEEDNFVNFTDS-----EIVSHVKDALTSVLSGDSNSYNQLVAVMHH 52

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             KR+  D+ AL+ T LKAL  AV  +D   H SLL+ IF  S+W+YG    +AL ELI +
Sbjct: 53   SKRLAPDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVS 112

Query: 672  LATVPDKFLDNCLYTLLHNLRPP----SRLKAPFNQSKRWLMRKEEVRREVYLALNCINT 839
            LA    K+LD CL  L+ N  PP     +LK P     R L RK +V   V+ A   I+ 
Sbjct: 113  LAISNGKYLDLCLGMLVSNFTPPPYFLDKLKLP-----RGLERKGQVLSLVHAAFKKISD 167

Query: 840  LVPLAPARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLID 1019
             +PLAP RL  ++ + MP        ++ YVE +L+LE  EIG+ +G T+L  VVD LI+
Sbjct: 168  YIPLAPLRLSNIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTMLMAVVDQLIE 227

Query: 1020 LDVNIPWEDILQEEPNKGIFAIELGECNEDDEY----TTIPNMDTLGLVKNTFADKLDGL 1187
            LD+ I W+ ILQ++ +KGIF +EL + +E +E     T    +    L  N+ A+ LD L
Sbjct: 228  LDLEIGWDAILQDDFSKGIFEMELEDVDEVEESAEQDTGEFRLSRKSLAGNSIAELLDNL 287

Query: 1188 MLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKF 1367
            +++  EHL+SC  +G L +VFE L + FQ  ++  +KSKFTQF+MFYAC+LDPD CG++F
Sbjct: 288  LVLTFEHLESCERAGRLAKVFETLLQSFQITVMSAYKSKFTQFVMFYACALDPDYCGMRF 347

Query: 1368 AIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDS 1547
            A ML D+F+        RM A+AYLASYL+RAKF+ +SL++S+LKRLVDWC EY +  D 
Sbjct: 348  ATMLADLFVQDSHPQPIRMSAVAYLASYLSRAKFLSASLISSMLKRLVDWCLEYGKTPDG 407

Query: 1548 WVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKV 1727
             +N   P A RVFYSGCQA+MY+LCFR++   DVP+LK  L  +P++ IL H  L+PLKV
Sbjct: 408  DIN---PNAHRVFYSGCQAIMYVLCFRMKVFMDVPRLKMQLL-MPMEQILKHK-LNPLKV 462

Query: 1728 CLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESD 1907
            CLP +V+EFLRQ++ A LF     + +D  LESE S AFGG++RLD FFPFDP LLK  D
Sbjct: 463  CLPSVVEEFLRQSKAACLFTVSKTFVFDGLLESELSRAFGGLERLDTFFPFDPCLLKRCD 522

Query: 1908 RFMRPNFEFWDMVKTT 1955
             F+RP F FW MVK T
Sbjct: 523  SFIRPMFVFWSMVKPT 538


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  456 bits (1173), Expect = e-125
 Identities = 265/613 (43%), Positives = 372/613 (60%), Gaps = 14/613 (2%)
 Frame = +3

Query: 354  VEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALMAT 533
            +E+   SDS+    ++    GV +A   V   ++E YD LV  ++P K +  D+ A++ T
Sbjct: 15   MENDDFSDSQ----LVRHFRGVLVA---VTTGDRENYDELVGYLHPKKNLNPDEVAILVT 67

Query: 534  ALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITTLATVPDKFLDNCLY 713
             LKALS AV  +D+V+H SLL  +   S+W+YG+D  +ALLELI +LA    K++D CL 
Sbjct: 68   TLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGKYIDWCLE 127

Query: 714  TLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKCMP 893
             L+ +  PP  L     Q +  + RK +V   V+ AL  I  LVPLAP RL  ++ + MP
Sbjct: 128  MLVKHFVPPFYLLDSLRQ-ENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMP 186

Query: 894  RFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVNIPWEDILQEEPNKG 1073
                 +  ++ YVE +L LE   IG+ +G  +L  +VD L++LDV I W+ ILQE+  KG
Sbjct: 187  SVFSKETEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDA-KG 245

Query: 1074 IFAIELGE----CNEDDEYTTIPNMDTLG---LVKNTFADKLDGLMLVACEHLKSCSESG 1232
            IF +EL +     +ED+   ++P  + L    L  N   +KLD LM++A  HL+SC  SG
Sbjct: 246  IFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSG 305

Query: 1233 HLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDEDP 1412
             L EVF+ L   FQR +L  +KSKFTQ++MFYAC+LDP+ CG+KFA++L D+F      P
Sbjct: 306  RLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPP 365

Query: 1413 DSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISPQADRVFYS 1592
             +RM A AYLASYL RAKF+ ++LV +I++ LVDWC+ YC+L+D  +N   P+A +VFYS
Sbjct: 366  ITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMN---PRAHQVFYS 422

Query: 1593 GCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQAQT 1772
            GCQA+MYILCFR+RS+ D+P+LK  L ++P+++IL H  L PLKVCLP +V EFLRQA+ 
Sbjct: 423  GCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHK-LSPLKVCLPTVVVEFLRQAKA 481

Query: 1773 ARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDMVKT 1952
            A+LF    ++ +D+ LES+ S AFGGI RLDMFFPFDP LLK+S+ ++RP+F  W  V+T
Sbjct: 482  AQLFMASESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLLKKSESYIRPHFVRWSKVRT 541

Query: 1953 TXXXXXXXXXXXXXXXXXLKDLGPSNFP-------XXXXXXXXXXXXXXXMSITPNPSFL 2111
            T                   D    N                        MSITP  SF 
Sbjct: 542  TYDDDDNDELSDSGSEVSDDDFIDRNTKDMIDDDMMVSVEGFDFNPDLNKMSITPRKSFK 601

Query: 2112 HQIATNFDQSSQM 2150
            H   T  +Q  +M
Sbjct: 602  HGFETQLNQCKRM 614


>ref|XP_002437492.1| hypothetical protein SORBIDRAFT_10g028030 [Sorghum bicolor]
            gi|241915715|gb|EER88859.1| hypothetical protein
            SORBIDRAFT_10g028030 [Sorghum bicolor]
          Length = 593

 Score =  456 bits (1173), Expect = e-125
 Identities = 264/616 (42%), Positives = 364/616 (59%), Gaps = 5/616 (0%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG E QGYD       +  L DS+ F  ++ V+  VRM P L+    K QYD+L+ +V+P
Sbjct: 1    MGAE-QGYDDM-----EVTLRDSDVFNYIVEVLQNVRMDPFLIDLRYKSQYDFLLDLVDP 54

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             K+   D+EA+ AT L+ALS AV  +D +YH +LL+NIF   +W      R  LL+LIT 
Sbjct: 55   TKKRTSDEEAMFATTLEALSEAVSTIDTMYHHALLHNIFTMCVWYLNSYTRVVLLDLITR 114

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA V D++L  CL  L++N  PP  L   + +  RWL +KEE+  ++  +L  I+  VPL
Sbjct: 115  LAAVADQYLRECLQMLVNNFTPPGPL-IRYIEEPRWLAKKEEIYSQLQESLKKISDTVPL 173

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            AP  LK +I++ MP+  + K  ++++VE +L L+  +    +G ++L +VV LL +LDVN
Sbjct: 174  APRMLKDIIDRSMPKLFDSKAKMVSFVECMLGLDA-DTWDIIGPSLLEKVVYLLTELDVN 232

Query: 1032 IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMLVACEHL 1211
            I WEDILQ+E NKGIF +EL + +ED++         L    N  A+KLDGLM+V C+HL
Sbjct: 233  ITWEDILQDEHNKGIFDMELEDLDEDEDNLGQEGTKVL-FGGNVCAEKLDGLMVVVCKHL 291

Query: 1212 KS-CSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDI 1388
            KS   E   L + F+ L  IF+  ++++HKSKF QF+MFYACSL P  CG  FA  L DI
Sbjct: 292  KSRAEEPDRLNKEFDTLKAIFKSHVIRVHKSKFAQFIMFYACSLYPKICGEGFAFFLVDI 351

Query: 1389 FISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISP 1568
            FI KD+  D+                          + RLV+WC +YC  Q       +P
Sbjct: 352  FIDKDKKEDA--------------------------ITRLVEWCGDYCGSQLDKGVTANP 385

Query: 1569 QADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQ 1748
               ++FY+ CQAVMY+LCFRLRSI D P LK  LF + + +IL HP L+PLKVCLP IV 
Sbjct: 386  IKHQLFYASCQAVMYVLCFRLRSIMDYPNLKLQLFQMRIQNILAHP-LEPLKVCLPSIVN 444

Query: 1749 EFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNF 1928
            EFLRQA++A LF   +  ++++++ES+ S AFGG+ RLDMFFPFDPYLLKESDR++RPNF
Sbjct: 445  EFLRQARSASLFHASVNSTHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDRYIRPNF 504

Query: 1929 EFWDMVKTTXXXXXXXXXXXXXXXXXLKDLG----PSNFPXXXXXXXXXXXXXXXMSITP 2096
            EFW +VKTT                    +       +F                MSITP
Sbjct: 505  EFWSLVKTTYSNNNSDEDNDELADIDAPGMNVGSLDDHFEIDFNNDDDIEYSMNKMSITP 564

Query: 2097 NPSFLHQIATNFDQSS 2144
            + +F H +ATN + SS
Sbjct: 565  HRTFYHPLATNSEFSS 580


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  454 bits (1167), Expect = e-124
 Identities = 257/561 (45%), Positives = 360/561 (64%), Gaps = 14/561 (2%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG+EL         +ED  +SD E       ++  VR A + V   + + Y+ LV V++ 
Sbjct: 1    MGMELPKDHAESHEMEDVNISDLE-------LVYHVREALTSVQSGDNDNYNQLVAVMHL 53

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
              R+  D+ AL+ T+LKALS AV  +D  +H SLL +IF  S+W+Y  D  +AL  LI +
Sbjct: 54   SGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIIS 113

Query: 672  LATVPDKFLDNCLYTLLHNLRPPS----RLKAPFNQSKRWLMRKEEVRREVYLALNCINT 839
            LA    K++D+CL  L+ N  PPS    +LK P       L RK +V   V+ AL  I  
Sbjct: 114  LAASSGKYVDSCLTMLVGNFTPPSYFLDKLKEPHG-----LERKHQVLSRVHAALKSIFD 168

Query: 840  LVPLAPARLKILIEKCMPRFT---EDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDL 1010
            LVPLAP RL  ++ + MP      E   +++ Y E +L+LE + +G+ +  T+L  VVD 
Sbjct: 169  LVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDR 228

Query: 1011 LIDLDVNIPWEDILQEEPNKGIFAIELGECNE--DDEYTT---IPN--MDTLGLVKNTFA 1169
            LIDLD+ I W+DIL ++ +KGIF +EL +  E  DD       +P+  +    L  N  A
Sbjct: 229  LIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISRKSLSGNLIA 288

Query: 1170 DKLDGLMLVACEHLKSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPD 1349
            + LD L+++  EHL+SC  +G L+EVFE L + FQ  +L  +KSKF QF+MFYAC+LDP+
Sbjct: 289  ELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPE 348

Query: 1350 TCGLKFAIMLTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEY 1529
             CGL+FA ML D+F+S    P +RM +++YLASYL+RA+F+    + S+LKRLVDWC EY
Sbjct: 349  NCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEY 408

Query: 1530 CQLQDSWVNKISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPV 1709
            C +       I+P+A RVFYSGCQA+MY+LCFR+RSI DVP+LK  L  +P++++L H  
Sbjct: 409  CNIPG---GNINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHN- 464

Query: 1710 LDPLKVCLPLIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPY 1889
            L+PLKVCLP +V EFL+Q++ ARLF     + +++ LESE S  FGG++RLDMFFPFDP 
Sbjct: 465  LNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFNDLLESELSRDFGGLERLDMFFPFDPC 524

Query: 1890 LLKESDRFMRPNFEFWDMVKT 1952
            LLK+SD F+RPNF +W MVKT
Sbjct: 525  LLKKSDSFIRPNFIYWSMVKT 545


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  454 bits (1167), Expect = e-124
 Identities = 250/543 (46%), Positives = 354/543 (65%), Gaps = 14/543 (2%)
 Frame = +3

Query: 369  LSDSEAFASVIN-------VINGVRMAPSLVPQSNKEQYDYLVTVVNPGKRIGQDDEALM 527
            +SD E F+ + N       +++  R     V   ++E YD LV  ++P K +  D+ A++
Sbjct: 6    VSDKEEFSQMENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPDEVAIL 65

Query: 528  ATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITTLATVPDKFLDNC 707
             T LKALS AV  +D+V+H SLL  +   S+W+ G+D  +ALLELI +LA    K++D C
Sbjct: 66   VTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWC 125

Query: 708  LYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPLAPARLKILIEKC 887
            L  L+ N  PP  L     Q +  + RK +V   V+ AL  I  LVPLAP RL  ++ + 
Sbjct: 126  LEMLVKNFVPPFYLLDSLRQ-ENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQK 184

Query: 888  MPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVNIPWEDILQEEPN 1067
            MP     +  ++ YVE +L LE   +G+ +G T+L  +VD L++LDV I W+ ILQE+  
Sbjct: 185  MPSVFSKETEIVMYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDGILQEDA- 243

Query: 1068 KGIFAIELGEC----NEDDEYTTIPNMDTLG---LVKNTFADKLDGLMLVACEHLKSCSE 1226
            KGIF +EL +     +ED+   ++ + + L    L  N   +KLD LM++A  HL+SC  
Sbjct: 244  KGIFEMELEDVTEFTDEDENCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQN 303

Query: 1227 SGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIFISKDE 1406
            SG L EVF  L   FQR +L  +KSKFTQF+MFYAC+LDP+ CG+KFA++L D+F     
Sbjct: 304  SGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDAN 363

Query: 1407 DPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISPQADRVF 1586
             P +RM A+AYLASYL RAKF+ ++LV SI++ LVDWC+ YC+ +D  +N   P+A +VF
Sbjct: 364  PPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKFRDFDMN---PRAHQVF 420

Query: 1587 YSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQEFLRQA 1766
            YSGCQA+MYI+CFR+RS+ DVP+LK  L ++P+++IL H  L PLKVCLP +V EFLRQA
Sbjct: 421  YSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHK-LSPLKVCLPTVVVEFLRQA 479

Query: 1767 QTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDMV 1946
            + A+LF    ++ +D+ LES+ S AFGG+ RLDMFFPFDP LLK S+ ++RP+F  W  V
Sbjct: 480  KAAQLFMASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLLKRSESYIRPHFVRWSKV 539

Query: 1947 KTT 1955
            +TT
Sbjct: 540  RTT 542


>gb|AFW69235.1| hypothetical protein ZEAMMB73_457339 [Zea mays]
          Length = 592

 Score =  450 bits (1158), Expect = e-123
 Identities = 266/619 (42%), Positives = 360/619 (58%), Gaps = 9/619 (1%)
 Frame = +3

Query: 312  MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP 491
            MG E QGY+   G   D     SE F  V  V+  VRM P L+   +K+ YDY++ +++P
Sbjct: 1    MGAE-QGYEDMQGTFRD-----SEVFEFVGKVLQSVRMDPFLIDIRDKDYYDYMLGIIDP 54

Query: 492  GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT 671
             K+   DDEA+  T L+ALS+AV ++D VYH +LL+NIF   +W    D R   L+LIT 
Sbjct: 55   TKKRSTDDEAMFVTILRALSQAVSKIDTVYHHALLHNIFTMCVWHLHSDTRVVFLDLITR 114

Query: 672  LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL 851
            LA V D++L  CL  L++N  PP  L   + +  RWL +KE++  ++  +L  I+  VPL
Sbjct: 115  LAAVADQYLRECLQMLVNNFTPPGPL-IRYIEEPRWLPKKEKIYSQLQESLKMISDTVPL 173

Query: 852  APARLKILIEKCMPRFTEDKYVLMTYVEGILELERNEIGKFLGRTVLARVVDLLIDLDVN 1031
            AP  LK +I++ MP+  + K  ++++V+ +L L+   +   +G ++L +VV LL +LDVN
Sbjct: 174  APRMLKDIIDRSMPKLFDSKAKMVSFVKCMLGLDA-VVWDIIGSSLLEKVVYLLTELDVN 232

Query: 1032 IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVK----NTFADKLDGLMLVA 1199
            I WEDILQ+E NKGIF +EL +  ED++     N+   G       N  A+KLDGLM+V 
Sbjct: 233  ITWEDILQDEHNKGIFDMELEDLAEDED-----NLGQEGTKVHFGGNMCAEKLDGLMVVV 287

Query: 1200 CEHLKS-CSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIM 1376
            CEHLKS   E   L++ F  L  IF+  +L++HKSKF QF+MFYACSL P+  G  FA  
Sbjct: 288  CEHLKSRVEEPERLIKEFVTLKAIFKSHVLRVHKSKFAQFIMFYACSLHPEI-GDGFANF 346

Query: 1377 LTDIFISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVN 1556
            LTDIFI KD++ D+                          + RLVDWC  YC  Q     
Sbjct: 347  LTDIFIDKDKNEDA--------------------------ITRLVDWCDYYCGHQLDNGV 380

Query: 1557 KISPQADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLP 1736
              +P   ++FY+ CQAVMY+LCFRLRSI D P LKQ LF + +  IL HP L PLKVCLP
Sbjct: 381  TANPIKHQLFYASCQAVMYVLCFRLRSIMDYPNLKQQLFRMRIRDILVHP-LQPLKVCLP 439

Query: 1737 LIVQEFLRQAQTARLFKKPMAYSYDNSLESEFSMAFGGIQRLDMFFPFDPYLLKESDRFM 1916
             IV EFLRQA  A LF  P    +++++ES+ S AFGG+ RLDMFFPFDPYLLKESDR++
Sbjct: 440  SIVNEFLRQATAASLFHAPAISMHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDRYI 499

Query: 1917 RPNFEFWDMVKTTXXXXXXXXXXXXXXXXXLKDLG----PSNFPXXXXXXXXXXXXXXXM 2084
            RPNFEFW +VKTT                    +       +F                M
Sbjct: 500  RPNFEFWSLVKTTYSNDNSDEDDEELGDIDAPGMNVGSLDDHFEIDFNSDDDIEYKMNKM 559

Query: 2085 SITPNPSFLHQIATNFDQS 2141
            SITP  +F H +ATN + +
Sbjct: 560  SITPQRTFYHPLATNSESN 578