BLASTX nr result
ID: Zingiber25_contig00007488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00007488
(323 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 71 1e-10
ref|XP_006578260.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 70 4e-10
ref|XP_006578259.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 70 4e-10
ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 70 4e-10
ref|XP_004501631.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 69 7e-10
ref|XP_004163959.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca... 67 2e-09
ref|XP_004148434.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 67 2e-09
ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 67 2e-09
emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera] 67 2e-09
ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [S... 65 7e-09
ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 65 9e-09
emb|CBI19252.3| unnamed protein product [Vitis vinifera] 65 9e-09
ref|XP_006660217.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 63 4e-08
gb|EMJ09286.1| hypothetical protein PRUPE_ppa001429mg [Prunus pe... 63 4e-08
ref|XP_004237986.1| PREDICTED: uncharacterized protein LOC101252... 63 5e-08
gb|ESW09643.1| hypothetical protein PHAVU_009G144200g [Phaseolus... 62 6e-08
ref|XP_002307344.2| hypothetical protein POPTR_0005s17820g [Popu... 62 6e-08
tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrol... 62 6e-08
gb|ACF84178.1| unknown [Zea mays] gi|414869931|tpg|DAA48488.1| T... 62 6e-08
gb|ACF83022.1| unknown [Zea mays] 62 6e-08
>ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 1116
Score = 71.2 bits (173), Expect = 1e-10
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSL-ASRTLSLD---RVLTKRSR 170
Q KWFK DD++V AVE+ +VL+K AYMLFYARCSP P L +R LS D +V K ++
Sbjct: 857 QNKWFKVDDSVVTAVELERVLTKGAYMLFYARCSPRAPKLIRNRILSQDSNSKVNGKSTK 916
Query: 171 SREAHSSGYDREKTTHGLPECHDEPNQAVGYRVLH---FTARDSSSHSSALFS 320
+R S+ E + + ++ R H DSSS SS+LFS
Sbjct: 917 ARSTSSNSGAAEPISSSVSPDGSPTLESFYSRFHHLKKILEEDSSSDSSSLFS 969
>ref|XP_006578260.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X3
[Glycine max]
Length = 1080
Score = 69.7 bits (169), Expect = 4e-10
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSL-ASRTLSLD-------RVLT 158
Q KWFK DD++V AVE+ +VL+K AYMLFYARCSP P L +R LS D + LT
Sbjct: 876 QNKWFKVDDSVVTAVELDRVLTKGAYMLFYARCSPRAPRLIRNRILSPDSKRKVSGKTLT 935
Query: 159 KRSRSREAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTAR----DSSSHSSALFS 320
++RS +SG + P+ D P Y H R DSSS +S+L S
Sbjct: 936 TKARSIST-NSGVAEHVNSSISPD--DSPALDSFYSKFHHLKRILEEDSSSDNSSLIS 990
>ref|XP_006578259.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X2
[Glycine max]
Length = 1138
Score = 69.7 bits (169), Expect = 4e-10
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSL-ASRTLSLD-------RVLT 158
Q KWFK DD++V AVE+ +VL+K AYMLFYARCSP P L +R LS D + LT
Sbjct: 876 QNKWFKVDDSVVTAVELDRVLTKGAYMLFYARCSPRAPRLIRNRILSPDSKRKVSGKTLT 935
Query: 159 KRSRSREAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTAR----DSSSHSSALFS 320
++RS +SG + P+ D P Y H R DSSS +S+L S
Sbjct: 936 TKARSIST-NSGVAEHVNSSISPD--DSPALDSFYSKFHHLKRILEEDSSSDNSSLIS 990
>ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
[Glycine max]
Length = 1063
Score = 69.7 bits (169), Expect = 4e-10
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSL-ASRTLSLD-------RVLT 158
Q KWFK DD++V AVE+ +VL+K AYMLFYARCSP P L +R LS D + LT
Sbjct: 876 QNKWFKVDDSVVTAVELDRVLTKGAYMLFYARCSPRAPRLIRNRILSPDSKRKVSGKTLT 935
Query: 159 KRSRSREAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTAR----DSSSHSSALFS 320
++RS +SG + P+ D P Y H R DSSS +S+L S
Sbjct: 936 TKARSIST-NSGVAEHVNSSISPD--DSPALDSFYSKFHHLKRILEEDSSSDNSSLIS 990
>ref|XP_004501631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cicer
arietinum]
Length = 1129
Score = 68.9 bits (167), Expect = 7e-10
Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSL-ASRTLSLD-------RVLT 158
Q KWFK DD++V AVE+ +VL+K AYMLFYARCSP P L +R LS D + LT
Sbjct: 860 QNKWFKVDDSVVTAVELERVLTKGAYMLFYARCSPRAPKLIRNRILSPDSKSKVNGKSLT 919
Query: 159 KRSRSREAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTAR----DSSSHSSALFS 320
+ R ++S + ++ P+ P Y H R DSSS SS+LFS
Sbjct: 920 TKPRFMSSNSGAAESISSSIS-PD--GSPTLESFYSKFHHLKRILEEDSSSDSSSLFS 974
>ref|XP_004163959.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
16-like, partial [Cucumis sativus]
Length = 1115
Score = 67.0 bits (162), Expect = 2e-09
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLD---RVLTK---- 161
Q KWFK DD+ V A++V VL++ AYMLFYARCSP P L ++ D R+++
Sbjct: 871 QNKWFKVDDSTVTAMDVKNVLTRGAYMLFYARCSPRAPRLIRNKITTDSRNRLISSLING 930
Query: 162 -RSRSREAHSSGY-DREKTTHGLPECHDEPNQAVGYRVLH----FTARDSSSHSSALFS 320
S S+ + +S Y D + +D N + YR H D +S SS+LFS
Sbjct: 931 TSSSSKSSPNSTYPDSQNLNMNNNSSNDPSNISSFYRKFHQLQKLLEEDLTSDSSSLFS 989
>ref|XP_004148434.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cucumis
sativus]
Length = 1113
Score = 67.0 bits (162), Expect = 2e-09
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLD---RVLTK---- 161
Q KWFK DD+ V A++V VL++ AYMLFYARCSP P L ++ D R+++
Sbjct: 869 QNKWFKVDDSTVTAMDVKNVLTRGAYMLFYARCSPRAPRLIRNKITTDSRNRLISSLING 928
Query: 162 -RSRSREAHSSGY-DREKTTHGLPECHDEPNQAVGYRVLH----FTARDSSSHSSALFS 320
S S+ + +S Y D + +D N + YR H D +S SS+LFS
Sbjct: 929 TSSSSKSSPNSTYPDSQNLNMNNNSSNDPSNISSFYRKFHQLQKLLEEDLTSDSSSLFS 987
>ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/107 (38%), Positives = 58/107 (54%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSREA 182
Q KWFK DD+ V+ VE+ +VL+K AYML YARCSP P L + + R+R EA
Sbjct: 922 QNKWFKIDDSTVKPVELERVLTKGAYMLLYARCSPRAPRL------IRNAVIPRNRKLEA 975
Query: 183 HSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTARDSSSHSSALFSC 323
SS + TT L HD + G ++H ++ ++ HS + C
Sbjct: 976 ASSRNIVKNTTFKLR--HDSIDSTAGQSMIH--SKPTAYHSRSPVDC 1018
>emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/107 (38%), Positives = 58/107 (54%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSREA 182
Q KWFK DD+ V+ VE+ +VL+K AYML YARCSP P L + + R+R EA
Sbjct: 934 QNKWFKIDDSTVKPVELERVLTKGAYMLLYARCSPRAPRL------IRNAVIPRNRKLEA 987
Query: 183 HSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTARDSSSHSSALFSC 323
SS + TT L HD + G ++H ++ ++ HS + C
Sbjct: 988 ASSRNIVKNTTFKLR--HDSIDSTAGQSMIH--SKPTAYHSRSPVDC 1030
>ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
gi|241941997|gb|EES15142.1| hypothetical protein
SORBIDRAFT_07g023330 [Sorghum bicolor]
Length = 998
Score = 65.5 bits (158), Expect = 7e-09
Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLS------------LD 146
QGKWFK DD+ V+ V + V+SK AYML YARCSP PS + + +
Sbjct: 739 QGKWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPRAPSSVRQAMGDPAHPKKAKQKVVS 798
Query: 147 RVLTKRSRSREAHSSGYD-REKTTHGLPECHDEPNQAVGYRVLHFTARD--SSSHSSALF 317
T R S H +G R++T L DE YR + ++ D S S SS+LF
Sbjct: 799 GGTTWRGGSLNRHQAGQQHRDQTADDLTHAFDE------YRDVPYSPSDSPSPSESSSLF 852
Query: 318 S 320
S
Sbjct: 853 S 853
>ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1125
Score = 65.1 bits (157), Expect = 9e-09
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSL-ASRTLSLD-------RVLT 158
Q KW K DD++V AVE+ +VL+K AY+LFYARCSP P L +R LS D + LT
Sbjct: 873 QNKWSKVDDSVVTAVELDRVLTKGAYILFYARCSPRAPRLIRNRILSPDSKSKVSGKTLT 932
Query: 159 KRSRSREAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTAR----DSSSHSSALFS 320
++R +S + ++ D P A Y H R DSSS +S+L S
Sbjct: 933 TKARYISTNSGVSEHANSS---ISSDDSPALASFYSKFHHLKRILEEDSSSDNSSLIS 987
>emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/101 (39%), Positives = 56/101 (55%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSREA 182
Q KWFK DD+ V+ VE+ +VL+K AYML YARCSP P L + + R+R EA
Sbjct: 744 QNKWFKIDDSTVKPVELERVLTKGAYMLLYARCSPRAPRL------IRNAVIPRNRKLEA 797
Query: 183 HSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTARDSSSHS 305
SS + TT L HD + G ++H ++ ++ HS
Sbjct: 798 ASSRNIVKNTTFKLR--HDSIDSTAGQSMIH--SKPTAYHS 834
>ref|XP_006660217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Oryza
brachyantha]
Length = 992
Score = 63.2 bits (152), Expect = 4e-08
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCP-SLASRTLSLDRVLTKRSRSR- 176
QGKW+KTDD+ V+ V + V+SK AYML YARCSP P S+ ++ D K+++SR
Sbjct: 734 QGKWYKTDDSQVKPVSLENVMSKCAYMLLYARCSPRAPRSVRPALMAQDPARVKKAKSRV 793
Query: 177 -----------EAHSSG-YDREKTTHGLPECHDEPNQAVGYRVLHFTARDSSSHSSALFS 320
H G + T LP +DE G+ S S SS++F+
Sbjct: 794 NSGRWHGVDPINRHQGGQLHADHMTDDLPNTYDE----YGHAPYSPAESPSPSESSSIFT 849
>gb|EMJ09286.1| hypothetical protein PRUPE_ppa001429mg [Prunus persica]
Length = 830
Score = 63.2 bits (152), Expect = 4e-08
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPS-LASRTLSLDRVLTKRSRSRE 179
QG+WFK DD+ VE V++ +VLS+ AYML YAR +P P+ L S +S L +R+
Sbjct: 647 QGEWFKIDDSSVEPVDLKRVLSQGAYMLLYARRTPRPPAFLGSTAVSNGEKLKRRNLEAV 706
Query: 180 AHSSGYDREKTTHGLP------ECHDEPNQAVGYRVLHFTARDSSSHSSALFS 320
S + ++ +P + +P+ + F A DSSS SS++FS
Sbjct: 707 PSSHTKSKSRSNSVVPSLISNQSLNQDPDDWRFHSTHRFPALDSSSESSSIFS 759
>ref|XP_004237986.1| PREDICTED: uncharacterized protein LOC101252175 [Solanum
lycopersicum]
Length = 1158
Score = 62.8 bits (151), Expect = 5e-08
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSREA 182
Q KW+K DD+ V++VE+ +VLSK AYML Y+RCSP P + R L RS +R
Sbjct: 907 QNKWYKVDDSSVKSVELERVLSKGAYMLLYSRCSPRAPRIM-------RSLKSRSHTRSP 959
Query: 183 --HSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTARDSSSHSSALFS 320
S G KT G P+ + DSSS S+ FS
Sbjct: 960 WDSSHGDSTSKTCKGC----SYPSHTSVRPIRSIFEEDSSSEQSSFFS 1003
>gb|ESW09643.1| hypothetical protein PHAVU_009G144200g [Phaseolus vulgaris]
Length = 1125
Score = 62.4 bits (150), Expect = 6e-08
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSREA 182
Q +WFK DD++V AVE+ +VL+K AYML YARCSP P L +R+L+ S+S+ +
Sbjct: 864 QNRWFKVDDSVVTAVELERVLTKGAYMLLYARCSPRAPRLIR-----NRILSSDSKSKVS 918
Query: 183 HSSGYDREK---TTHGLPECHDEPNQAVG-------YRVLHFTAR----DSSSHSSALFS 320
+ + + T G+ E D G Y H + DSSS SS+L S
Sbjct: 919 GKTLATKARYISTNSGVAENVDSSISPDGSPALESFYSKFHHLKKILEEDSSSDSSSLIS 978
>ref|XP_002307344.2| hypothetical protein POPTR_0005s17820g [Populus trichocarpa]
gi|550339194|gb|EEE94340.2| hypothetical protein
POPTR_0005s17820g [Populus trichocarpa]
Length = 1125
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCP-SLASRTLSLD 146
Q KWFK DD+ V AVE+ +VLSK AYML YARCSP P S+ SR +S D
Sbjct: 864 QNKWFKIDDSTVTAVELERVLSKGAYMLLYARCSPRAPRSIRSRIISSD 912
>tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 973
Score = 62.4 bits (150), Expect = 6e-08
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSR-- 176
QGKWFK DD+ V+ V + V+SK AYML YARCSP PS + +S D K+++ R
Sbjct: 734 QGKWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPRAPSSVRQAMS-DPAHPKQAKQRVV 792
Query: 177 -----------------EAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTARD--SSS 299
+ HS + + TH DE YR ++ D S S
Sbjct: 793 PGGPTWRGGSFNGHQAGQRHSDDAEDDDATHA---AFDE------YRYAPYSPSDSPSPS 843
Query: 300 HSSALFS 320
SS+LFS
Sbjct: 844 ESSSLFS 850
>gb|ACF84178.1| unknown [Zea mays] gi|414869931|tpg|DAA48488.1| TPA: putative
ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 370
Score = 62.4 bits (150), Expect = 6e-08
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSR-- 176
QGKWFK DD+ V+ V + V+SK AYML YARCSP PS + +S D K+++ R
Sbjct: 131 QGKWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPRAPSSVRQAMS-DPAHPKQAKQRVV 189
Query: 177 -----------------EAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTARD--SSS 299
+ HS + + TH DE YR ++ D S S
Sbjct: 190 PGGPTWRGGSFNGHQAGQRHSDDAEDDDATHA---AFDE------YRYAPYSPSDSPSPS 240
Query: 300 HSSALFS 320
SS+LFS
Sbjct: 241 ESSSLFS 247
>gb|ACF83022.1| unknown [Zea mays]
Length = 495
Score = 62.4 bits (150), Expect = 6e-08
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Frame = +3
Query: 3 QGKWFKTDDAMVEAVEVGQVLSKNAYMLFYARCSPHCPSLASRTLSLDRVLTKRSRSR-- 176
QGKWFK DD+ V+ V + V+SK AYML YARCSP PS + +S D K+++ R
Sbjct: 256 QGKWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPRAPSSVRQAMS-DPAHPKQAKQRVV 314
Query: 177 -----------------EAHSSGYDREKTTHGLPECHDEPNQAVGYRVLHFTARD--SSS 299
+ HS + + TH DE YR ++ D S S
Sbjct: 315 PGGPTWRGGSFNGHQAGQRHSDDAEDDDATHA---AFDE------YRYAPYSPSDSPSPS 365
Query: 300 HSSALFS 320
SS+LFS
Sbjct: 366 ESSSLFS 372