BLASTX nr result
ID: Zingiber25_contig00007471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00007471
(499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis] 155 5e-36
gb|EOX94778.1| Chloroplast stem-loop binding protein of 41 kDa i... 150 2e-34
gb|EOX94777.1| Chloroplast stem-loop binding protein of 41 kDa i... 150 2e-34
ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putativ... 147 2e-33
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr... 146 2e-33
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc... 146 2e-33
ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding pro... 145 7e-33
gb|ESW16629.1| hypothetical protein PHAVU_007G172100g [Phaseolus... 144 9e-33
ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding pro... 144 2e-32
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro... 144 2e-32
gb|ACU24107.1| unknown [Glycine max] 144 2e-32
ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Caps... 143 3e-32
gb|EMJ01093.1| hypothetical protein PRUPE_ppa006606mg [Prunus pe... 142 4e-32
gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor,... 142 4e-32
ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arab... 142 4e-32
ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding pro... 142 5e-32
gb|ACU24035.1| unknown [Glycine max] 142 5e-32
ref|XP_002459548.1| hypothetical protein SORBIDRAFT_02g006430 [S... 142 5e-32
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140... 142 5e-32
ref|XP_004955807.1| PREDICTED: chloroplast stem-loop binding pro... 142 6e-32
>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
Length = 408
Score = 155 bits (392), Expect = 5e-36
Identities = 71/92 (77%), Positives = 84/92 (91%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS +A++ D+K VLIVNTNSGGHAVIGFYFA++LL SGHDVT+LTVGDEGSDKMKKPPF
Sbjct: 72 FSVRASAADKKRVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGDEGSDKMKKPPFN 131
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGGKT+WGDPA+V ++V G +FDVV
Sbjct: 132 RFSEIVSAGGKTVWGDPAEVGKVVGGAEFDVV 163
>gb|EOX94778.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2
[Theobroma cacao]
Length = 393
Score = 150 bits (378), Expect = 2e-34
Identities = 69/92 (75%), Positives = 82/92 (89%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
F+ KA+ ++K VLIVNTNSGGHAVIGFYFA++LL SGH+VT+LTVGDEGSDKMKKPPF
Sbjct: 64 FTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMKKPPFN 123
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGGKT+WGDPA V ++V+G FDVV
Sbjct: 124 RFSEIVSAGGKTVWGDPADVGKVVAGATFDVV 155
>gb|EOX94777.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1
[Theobroma cacao]
Length = 400
Score = 150 bits (378), Expect = 2e-34
Identities = 69/92 (75%), Positives = 82/92 (89%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
F+ KA+ ++K VLIVNTNSGGHAVIGFYFA++LL SGH+VT+LTVGDEGSDKMKKPPF
Sbjct: 64 FTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMKKPPFN 123
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGGKT+WGDPA V ++V+G FDVV
Sbjct: 124 RFSEIVSAGGKTVWGDPADVGKVVAGATFDVV 155
>ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223540129|gb|EEF41706.1| NAD dependent
epimerase/dehydratase, putative [Ricinus communis]
Length = 398
Score = 147 bits (370), Expect = 2e-33
Identities = 67/92 (72%), Positives = 81/92 (88%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
F+ KA++ +K VLIVNTNSGGHAVIGFYFA++LL SGH+VT+ TVGDE SDKMKKPPF+
Sbjct: 68 FTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTIFTVGDENSDKMKKPPFS 127
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGGKT+WGDPA+V ++V G FDVV
Sbjct: 128 RFSEIVSAGGKTVWGDPAEVGKVVEGATFDVV 159
>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa a,
chloroplastic-like [Citrus sinensis]
gi|557546339|gb|ESR57317.1| hypothetical protein
CICLE_v10020449mg [Citrus clementina]
Length = 401
Score = 146 bits (369), Expect = 2e-33
Identities = 66/92 (71%), Positives = 81/92 (88%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
F+ KA++ ++K VLIVNTNSGGHAVIGFY A++LL SGH+VT++TVGDE SDKMKKPPF
Sbjct: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN 124
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RF+E+VSAGGKT+WGDPA+V +V GV FDVV
Sbjct: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV 156
>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| mRNA-binding family protein
[Populus trichocarpa]
Length = 404
Score = 146 bits (369), Expect = 2e-33
Identities = 66/92 (71%), Positives = 83/92 (90%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
F+ KA++ ++K VLIVNTNSGGHAVIGFYFA++LL SGH+VT+LTVG+E SDKMKKPPF+
Sbjct: 68 FTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKPPFS 127
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGGKT+WG+PA+V ++V G FDVV
Sbjct: 128 RFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVV 159
>ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 404
Score = 145 bits (365), Expect = 7e-33
Identities = 66/92 (71%), Positives = 81/92 (88%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS KA + D+K VLIVNTNSGGHAVIGFYFA++LL SGH+VT+LTVG+E SDKMKK PFT
Sbjct: 68 FSVKAIAADKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKTPFT 127
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+V AGGKT+WG+PA++A+++ G FDVV
Sbjct: 128 RFSEIVGAGGKTVWGEPAEIAKVLEGSAFDVV 159
>gb|ESW16629.1| hypothetical protein PHAVU_007G172100g [Phaseolus vulgaris]
Length = 402
Score = 144 bits (364), Expect = 9e-33
Identities = 66/92 (71%), Positives = 81/92 (88%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS A+SV++K VLIVNTNSGGHA+IGFYFA++LL +GH VTVLTVG+EGSDKMKKPPF
Sbjct: 66 FSVSASSVEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTVLTVGEEGSDKMKKPPFN 125
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGG+T+WG+P++V +V G FDVV
Sbjct: 126 RFSEIVSAGGRTVWGNPSEVGSVVGGEVFDVV 157
>ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cucumis sativus]
Length = 409
Score = 144 bits (362), Expect = 2e-32
Identities = 65/92 (70%), Positives = 79/92 (85%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS +A+S +K VLIVNTNSGGHAVIGFYFA+QLL SGH+VT+LTVG++ SDKM KPPF
Sbjct: 73 FSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFN 132
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VS GGKT+WGDPA++ ++V G FDVV
Sbjct: 133 RFSEIVSGGGKTVWGDPAEIGKVVEGASFDVV 164
>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 404
Score = 144 bits (362), Expect = 2e-32
Identities = 65/92 (70%), Positives = 80/92 (86%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS A++ ++K VLIVNTNSGGHA+IGFYFA++LL +GH VT+LTVGDEGSDKMKKPPF
Sbjct: 68 FSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFN 127
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGG+T+WG+PA+V +V G FDVV
Sbjct: 128 RFSEIVSAGGRTVWGNPAQVGSVVGGEVFDVV 159
>gb|ACU24107.1| unknown [Glycine max]
Length = 208
Score = 144 bits (362), Expect = 2e-32
Identities = 65/92 (70%), Positives = 80/92 (86%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS A++ ++K VLIVNTNSGGHA+IGFYFA++LL +GH VT+LTVGDEGSDKMKKPPF
Sbjct: 68 FSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFN 127
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGG+T+WG+PA+V +V G FDVV
Sbjct: 128 RFSEIVSAGGRTVWGNPAQVGSVVGGEVFDVV 159
>ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Capsella rubella]
gi|482559945|gb|EOA24136.1| hypothetical protein
CARUB_v10017370mg [Capsella rubella]
Length = 404
Score = 143 bits (360), Expect = 3e-32
Identities = 67/93 (72%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = +3
Query: 222 FSAKAASV-DRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPF 398
F+ KA+SV ++K+VLIVNTNSGGHAVIGFYFA++LL++GH VT++TVGDE SDKMKKPPF
Sbjct: 67 FTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDESSDKMKKPPF 126
Query: 399 TRFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
+RFSE+VSAGGKT+WG+PA VA ++ G FDVV
Sbjct: 127 SRFSEIVSAGGKTVWGNPADVANVIGGQTFDVV 159
>gb|EMJ01093.1| hypothetical protein PRUPE_ppa006606mg [Prunus persica]
Length = 403
Score = 142 bits (359), Expect = 4e-32
Identities = 66/92 (71%), Positives = 80/92 (86%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS KA++ ++K VLIVNTN GGHAVIGFYFA++LL SGH VTVLTVG+E SDKMKKPPF+
Sbjct: 67 FSIKASAGEKKKVLIVNTNGGGHAVIGFYFAKELLGSGHQVTVLTVGEESSDKMKKPPFS 126
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGGKT+WG+PA + +I+ G FDVV
Sbjct: 127 RFSEIVSAGGKTVWGEPADIGKILEGTAFDVV 158
>gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor, partial [Spinacia
oleracea]
Length = 415
Score = 142 bits (359), Expect = 4e-32
Identities = 66/88 (75%), Positives = 75/88 (85%)
Frame = +3
Query: 234 AASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFTRFSE 413
+ S D+K VLIVNTNSGGHAVIGFYFA++LL SGH VTV TVGDEGSDKMKKPPFTRFSE
Sbjct: 84 STSTDKKKVLIVNTNSGGHAVIGFYFAKELLGSGHQVTVFTVGDEGSDKMKKPPFTRFSE 143
Query: 414 LVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
+ SAGGKT+WG+PA + +V G FDVV
Sbjct: 144 ITSAGGKTVWGNPADIGNVVGGEAFDVV 171
>ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein
ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 142 bits (359), Expect = 4e-32
Identities = 67/93 (72%), Positives = 82/93 (88%), Gaps = 1/93 (1%)
Frame = +3
Query: 222 FSAKAASV-DRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPF 398
F+ KA+SV D+K+VLIVNTNSGGHAVIGFYFA++LL++GH VT++TVGDE SDKMKKPPF
Sbjct: 71 FTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDESSDKMKKPPF 130
Query: 399 TRFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE++S GGKT+WG+PA VA +V G FDVV
Sbjct: 131 NRFSEIISGGGKTVWGNPADVANVVGGETFDVV 163
>ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 403
Score = 142 bits (358), Expect = 5e-32
Identities = 64/92 (69%), Positives = 80/92 (86%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS A++ ++K VLIVNTNSGGHA+IGFYFA++LL +GH VT+LTVG+EGSDKMKKPPF
Sbjct: 67 FSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFN 126
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGG+T+WG+PA+V +V G FDVV
Sbjct: 127 RFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVV 158
>gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 142 bits (358), Expect = 5e-32
Identities = 64/92 (69%), Positives = 80/92 (86%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS A++ ++K VLIVNTNSGGHA+IGFYFA++LL +GH VT+LTVG+EGSDKMKKPPF
Sbjct: 67 FSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFN 126
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+VSAGG+T+WG+PA+V +V G FDVV
Sbjct: 127 RFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVV 158
>ref|XP_002459548.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
gi|241922925|gb|EER96069.1| hypothetical protein
SORBIDRAFT_02g006430 [Sorghum bicolor]
Length = 407
Score = 142 bits (358), Expect = 5e-32
Identities = 68/89 (76%), Positives = 77/89 (86%)
Frame = +3
Query: 231 KAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFTRFS 410
+A + ++SVLIVNTNSGGHAVIGFYFA++LLA+GH VTVLTVGDEGSDKMKKPPF+RFS
Sbjct: 68 RAEAAKKQSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSDKMKKPPFSRFS 127
Query: 411 ELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
EL SAGGKT+WGDPA V V G FDVV
Sbjct: 128 ELTSAGGKTVWGDPADVGAAVGGASFDVV 156
>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera] gi|147789789|emb|CAN73874.1| hypothetical
protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 142 bits (358), Expect = 5e-32
Identities = 65/92 (70%), Positives = 78/92 (84%)
Frame = +3
Query: 222 FSAKAASVDRKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFT 401
FS +K VLIVNTNSGGHAVIGFYFA+QLL SGH+VT++TVG+E SDKMKKPPF+
Sbjct: 61 FSTLNVKAQKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEENSDKMKKPPFS 120
Query: 402 RFSELVSAGGKTLWGDPAKVAEIVSGVKFDVV 497
RFSE+ SAGGKT+WGDPA+V ++V+G FDVV
Sbjct: 121 RFSEITSAGGKTVWGDPAEVGKVVAGAAFDVV 152
>ref|XP_004955807.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Setaria italica]
Length = 397
Score = 142 bits (357), Expect = 6e-32
Identities = 68/83 (81%), Positives = 74/83 (89%)
Frame = +3
Query: 249 RKSVLIVNTNSGGHAVIGFYFAQQLLASGHDVTVLTVGDEGSDKMKKPPFTRFSELVSAG 428
+KSVLIVNTNSGGHAVIGFYFA++LLA+GH VTVLTVGDEGSDKMKKPPF+RFSEL AG
Sbjct: 67 KKSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSDKMKKPPFSRFSELTGAG 126
Query: 429 GKTLWGDPAKVAEIVSGVKFDVV 497
GKT+WGDPA V VSG FDVV
Sbjct: 127 GKTVWGDPADVGAAVSGASFDVV 149