BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00007176
         (1261 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006484279.1| PREDICTED: transcription factor bHLH49-like ...   218   5e-60
ref|XP_006484281.1| PREDICTED: transcription factor bHLH49-like ...   218   5e-60
ref|XP_006437828.1| hypothetical protein CICLE_v10031122mg [Citr...   218   7e-60
ref|XP_002314910.2| basic helix-loop-helix family protein [Popul...   215   5e-59
emb|CBI27416.3| unnamed protein product [Vitis vinifera]              204   5e-58
ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   202   2e-57
ref|XP_002514566.1| conserved hypothetical protein [Ricinus comm...   209   3e-57
gb|EOY01544.1| Basic helix-loop-helix DNA-binding superfamily pr...   201   2e-55
gb|EOY01545.1| Basic helix-loop-helix DNA-binding superfamily pr...   201   2e-55
gb|EOY01546.1| Basic helix-loop-helix DNA-binding superfamily pr...   201   2e-55
gb|EMJ26927.1| hypothetical protein PRUPE_ppa003619mg [Prunus pe...   190   4e-53
ref|XP_002312366.2| hypothetical protein POPTR_0008s11240g [Popu...   197   7e-53
gb|EXB44922.1| hypothetical protein L484_026510 [Morus notabilis]     206   2e-50
ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [S...   188   4e-50
gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japo...   182   1e-49
ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group] g...   182   1e-49
tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily...   183   3e-49
ref|XP_004490333.1| PREDICTED: transcription factor bHLH49-like ...   201   5e-49
gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indi...   179   6e-49
ref|XP_006660739.1| PREDICTED: transcription factor bHLH49-like ...   181   2e-48

>ref|XP_006484279.1| PREDICTED: transcription factor bHLH49-like isoform X1 [Citrus
            sinensis] gi|568861583|ref|XP_006484280.1| PREDICTED:
            transcription factor bHLH49-like isoform X2 [Citrus
            sinensis]
          Length = 558

 Score =  218 bits (555), Expect(2) = 5e-60
 Identities = 171/444 (38%), Positives = 219/444 (49%), Gaps = 89/444 (20%)
 Frame = +2

Query: 2    KFVLNSHHDG----------GEWQFN-----TPAMSMVPL--PLSAPSLAGGLMNQNTRS 130
            KFVL   +D            +WQF+       A+++VP   PL   S           S
Sbjct: 8    KFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGS-----------S 56

Query: 131  SYLSTPMVEVFSPGQWNHHPTSSPNMALGESNFAS---TSSINSIPVGKPVAISPR---- 289
            S  S PMV+ F+   W+H PT+S   +LG  N  +    SS N++ + K  + S R    
Sbjct: 57   SCSSAPMVDSFNQTIWDH-PTNS--QSLGYCNIDAQHNASSSNALGIRKGSSASLRSCID 113

Query: 290  ----------------GMLVSTAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXX 421
                            G+ +  AP +FP SL  FP DSAF+ERAAR              
Sbjct: 114  RPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN 173

Query: 422  XXXXPAMAPSNNEGIG-----------------------------DQVQKDELLQVDHES 514
                P      + G G                              +V KD  L V+H +
Sbjct: 174  TFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSRGQSQKNEMNVAEVSKDASLSVEHGA 233

Query: 515  FNGSTMKNQGDQNSQIGN-GESRVVIFPEDG------LEGNTGSTDAAL----NSSSSDR 661
             NGST+KN+    S + + GE++  +    G        G  G  + +         S +
Sbjct: 234  SNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK 293

Query: 662  GVN--KRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQ----INSKQTEKNGKDNS 823
            G++  KR++   DIE D  +GG QSS E  K+N EN++K +       +K   K GK  S
Sbjct: 294  GLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGS 352

Query: 824  EFV---KEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLD 994
            +     KE Y+HVRARRGQATNSHSLAERVRREKISERMK+LQ+LVPGCSKVTGKAVMLD
Sbjct: 353  QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412

Query: 995  EIINYVQSLQRQVEFLSMKLAAVN 1066
            EIINYVQSLQRQVEFLSMKLA VN
Sbjct: 413  EIINYVQSLQRQVEFLSMKLATVN 436



 Score = 41.6 bits (96), Expect(2) = 5e-60
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = +3

Query: 1104 GFSPEM--IYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            GFSP+M  +YP  + SQ  L+H  +  M + SD  RR I++Q T    G+KE
Sbjct: 463  GFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKE 514


>ref|XP_006484281.1| PREDICTED: transcription factor bHLH49-like isoform X3 [Citrus
            sinensis]
          Length = 530

 Score =  218 bits (555), Expect(2) = 5e-60
 Identities = 171/444 (38%), Positives = 219/444 (49%), Gaps = 89/444 (20%)
 Frame = +2

Query: 2    KFVLNSHHDG----------GEWQFN-----TPAMSMVPL--PLSAPSLAGGLMNQNTRS 130
            KFVL   +D            +WQF+       A+++VP   PL   S           S
Sbjct: 8    KFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGS-----------S 56

Query: 131  SYLSTPMVEVFSPGQWNHHPTSSPNMALGESNFAS---TSSINSIPVGKPVAISPR---- 289
            S  S PMV+ F+   W+H PT+S   +LG  N  +    SS N++ + K  + S R    
Sbjct: 57   SCSSAPMVDSFNQTIWDH-PTNS--QSLGYCNIDAQHNASSSNALGIRKGSSASLRSCID 113

Query: 290  ----------------GMLVSTAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXX 421
                            G+ +  AP +FP SL  FP DSAF+ERAAR              
Sbjct: 114  RPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN 173

Query: 422  XXXXPAMAPSNNEGIG-----------------------------DQVQKDELLQVDHES 514
                P      + G G                              +V KD  L V+H +
Sbjct: 174  TFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSRGQSQKNEMNVAEVSKDASLSVEHGA 233

Query: 515  FNGSTMKNQGDQNSQIGN-GESRVVIFPEDG------LEGNTGSTDAAL----NSSSSDR 661
             NGST+KN+    S + + GE++  +    G        G  G  + +         S +
Sbjct: 234  SNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK 293

Query: 662  GVN--KRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQ----INSKQTEKNGKDNS 823
            G++  KR++   DIE D  +GG QSS E  K+N EN++K +       +K   K GK  S
Sbjct: 294  GLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGS 352

Query: 824  EFV---KEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLD 994
            +     KE Y+HVRARRGQATNSHSLAERVRREKISERMK+LQ+LVPGCSKVTGKAVMLD
Sbjct: 353  QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412

Query: 995  EIINYVQSLQRQVEFLSMKLAAVN 1066
            EIINYVQSLQRQVEFLSMKLA VN
Sbjct: 413  EIINYVQSLQRQVEFLSMKLATVN 436



 Score = 41.6 bits (96), Expect(2) = 5e-60
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = +3

Query: 1104 GFSPEM--IYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            GFSP+M  +YP  + SQ  L+H  +  M + SD  RR I++Q T    G+KE
Sbjct: 463  GFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKE 514


>ref|XP_006437828.1| hypothetical protein CICLE_v10031122mg [Citrus clementina]
            gi|557540024|gb|ESR51068.1| hypothetical protein
            CICLE_v10031122mg [Citrus clementina]
          Length = 558

 Score =  218 bits (554), Expect(2) = 7e-60
 Identities = 173/450 (38%), Positives = 222/450 (49%), Gaps = 95/450 (21%)
 Frame = +2

Query: 2    KFVLNSHHDG----------GEWQFN-----TPAMSMVPL--PLSAPSLAGGLMNQNTRS 130
            KFVL   +D            +WQF+       A+++VP   PL   S           S
Sbjct: 8    KFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGS-----------S 56

Query: 131  SYLSTPMVEVFSPGQWNHHPTSSPNMALGESNFAS---TSSINSIPVGKPVAISPR---- 289
            S  S PMV+ F+   W+H PT+S   +LG  N  +    SS N++ + K  + S R    
Sbjct: 57   SCSSAPMVDSFNQTIWDH-PTNS--QSLGYCNIDAQHNASSSNALGIRKGSSASLRSCID 113

Query: 290  ----------------GMLVSTAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXX 421
                            G+ +  AP +FP SL  FP DSAF+ERAAR              
Sbjct: 114  RPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN 173

Query: 422  XXXXPAMAPSNNEGIG-----------------------------DQVQKDELLQVDHES 514
                P      + G G                              +V KD  L V+H +
Sbjct: 174  TFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGA 233

Query: 515  FNGSTMKNQGDQNSQIGN-GESRVVIFPEDGLEGNTGSTDAALNSSS------------- 652
             +GST+KN+    S + + GE++       G+ G+ G +D A  S               
Sbjct: 234  SDGSTLKNERKGESLVNSHGEAK------QGVGGSGGDSDEAEFSGGGGQDEPSAVEGTG 287

Query: 653  ---SDRGVN--KRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQ----INSKQTEK 805
               S +G++  KR++   DIE D  +GG QSS E  K+N EN++K +       +K   K
Sbjct: 288  GEPSAKGLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGK 346

Query: 806  NGKDNSEFV---KEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVTG 976
             GK  S+     KE Y+HVRARRGQATNSHSLAERVRREKISERMK+LQ+LVPGCSKVTG
Sbjct: 347  QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406

Query: 977  KAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            KAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 407  KAVMLDEIINYVQSLQRQVEFLSMKLATVN 436



 Score = 41.6 bits (96), Expect(2) = 7e-60
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = +3

Query: 1104 GFSPEM--IYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            GFSP+M  +YP  + SQ  L+H  +  M + SD  RR I++Q T    G+KE
Sbjct: 463  GFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKE 514


>ref|XP_002314910.2| basic helix-loop-helix family protein [Populus trichocarpa]
            gi|550329812|gb|EEF01081.2| basic helix-loop-helix family
            protein [Populus trichocarpa]
          Length = 562

 Score =  215 bits (548), Expect(2) = 5e-59
 Identities = 158/432 (36%), Positives = 203/432 (46%), Gaps = 80/432 (18%)
 Frame = +2

Query: 11   LNSHHDGG---EWQFNTPA-----MSMVPLPLSAPSLAGGLMNQNTRSSYLSTPMVEVFS 166
            +N H  GG   +W+FN+ +     + +VP+        G L+     +S  S  +++ F 
Sbjct: 19   INYHSPGGLSSDWRFNSTSIPNSSLGLVPIDNQMSVCRGDLVGA---ASCSSASVIDSFG 75

Query: 167  PGQWNHHPTSSPNMALGESNFAS-TSSINSIPVGKPVAISPR------------------ 289
            P  W H PT+S N+   + N  +  SS N++ +GK    S R                  
Sbjct: 76   PAMWEH-PTNSQNLVFCDINVQNIASSSNTVGIGKGAPASLRNGIDRTLEMGWNPPNSML 134

Query: 290  --GMLVSTAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEG 463
              G+ +  AP + P SL  FP DSAF+ERAAR                  P      + G
Sbjct: 135  KGGIFLPNAPGVLPQSLSQFPADSAFIERAARFSCFNGGDFGDMVNPFGVPESMGLFSRG 194

Query: 464  IG-----------------------------DQVQKDELLQVDHESFNGSTMKNQGDQNS 556
             G                              +  KD  + VDH +  GS +KN+  + S
Sbjct: 195  GGMMQGPGEVFVGSGMKSVSGGQAQKNVMNAGEASKDVSMSVDHMATEGSPLKNETKRES 254

Query: 557  QI-------------GNGESRVVIFPEDG------LEGNTGSTDAALNSSSSDRGVNKRR 679
                           GN           G      LEGN G        S+   G  KR+
Sbjct: 255  LARSRDEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGEL------SAKSLGSKKRK 308

Query: 680  KTVPDIERDPVQGGRQSSSETTKENIENKQKVEQINSKQTEKNGKDNSEFV---KEGYVH 850
            ++  D E D  +G  QS+  + +   +  QK     SK + K GK  S+     KE Y+H
Sbjct: 309  RSGEDAELDQAKGTPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSDQPKEEYIH 368

Query: 851  VRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 1030
            VRARRGQATNSHSLAERVRREKISERMK+LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQ
Sbjct: 369  VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 428

Query: 1031 VEFLSMKLAAVN 1066
            VEFLSMKLA VN
Sbjct: 429  VEFLSMKLATVN 440



 Score = 40.8 bits (94), Expect(2) = 5e-59
 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = +3

Query: 1107 FSPEM--IYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTA--SGYKE 1247
            FS EM   YP  + SQ  L+ T    M SHSD  RR I++Q TA  +G+KE
Sbjct: 468  FSSEMPMAYPALHQSQPGLIPTAFPGMESHSDIIRRTINSQLTAMTAGFKE 518


>emb|CBI27416.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  204 bits (519), Expect(2) = 5e-58
 Identities = 144/341 (42%), Positives = 178/341 (52%), Gaps = 28/341 (8%)
 Frame = +2

Query: 128  SSYLSTPMVEVFSPGQWNHHPTSSPNMALGESNF---ASTSSINSIPVGKPVAIS----- 283
            SS  S  MV+ F P  W+H P +S  +   + N    ASTSS   I  G P ++      
Sbjct: 44   SSCSSASMVDSFGPNLWDH-PANSQTLGFCDMNVQNNASTSSTLGIRKGGPGSLRMDIDK 102

Query: 284  -------------PRGMLVSTAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXXX 424
                           G+ +  AP + P  L  FP DS F+ERAAR               
Sbjct: 103  TLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDMMNP 162

Query: 425  XXXPAMAPSNNEGIGDQVQKDELLQVDHESFNGSTMKNQGDQNSQIGNGESRVVIFPEDG 604
               P      + G G  +Q+D       +S  G   +      ++I    S+ V   +  
Sbjct: 163  FSIPESLNPYSRG-GGMLQQDVFASNGLKSVPGGQSQKDEPSMAEI----SKDVSSAKQN 217

Query: 605  LEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQ- 781
             E   G       SS    G  KR+++  D E D V+G  Q   E +K+N E + K +Q 
Sbjct: 218  KELGCGEP-----SSGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQN 272

Query: 782  ---INSKQTEKNGKDN---SEFVKEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQ 943
               + SK T K+GK     S+  KE Y+HVRARRGQATNSHSLAERVRREKISERMK+LQ
Sbjct: 273  PSSVPSKNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 332

Query: 944  ELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            +LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 333  DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 373



 Score = 48.9 bits (115), Expect(2) = 5e-58
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 1104 GFSPE--MIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTA--SGYKESPLQ 1259
            GFSPE  M YPQ +PSQ  L+  G+  + + SD  RR I++Q  A   GYKES  Q
Sbjct: 400  GFSPETTMPYPQLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAPQ 455


>ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
            [Vitis vinifera]
          Length = 609

 Score =  202 bits (513), Expect(2) = 2e-57
 Identities = 162/425 (38%), Positives = 201/425 (47%), Gaps = 79/425 (18%)
 Frame = +2

Query: 29   GGEWQFNTPAMSMV----PLPLSAPSLAGGLMNQNTRSSYLSTPMVEVFSPGQWNHHPTS 196
            GG       +MS V    P+ +    L G        SS  S  MV+ F P  W+H P +
Sbjct: 67   GGGGNLTNTSMSTVQGGNPMAVCKGDLVGS-------SSCSSASMVDSFGPNLWDH-PAN 118

Query: 197  SPNMALGESNF---ASTSSINSIPVGKPVAIS------------------PRGMLVSTAP 313
            S  +   + N    ASTSS   I  G P ++                     G+ +  AP
Sbjct: 119  SQTLGFCDMNVQNNASTSSTLGIRKGGPGSLRMDIDKTLDIGWNPPSSMLKGGIFLPNAP 178

Query: 314  RIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXP-AMAPSNNEG--------- 463
             + P  L  FP DS F+ERAAR                  P ++ P +  G         
Sbjct: 179  GMLPQGLSQFPADSGFIERAARFSCFNGGNFSDMMNPFSIPESLNPYSRGGGMLQQDVFA 238

Query: 464  -------IGDQVQKDE--LLQVDHE-------SFNGSTMKNQ------------GDQNSQ 559
                    G Q QKDE  + ++  +       +  GS +KN+              Q   
Sbjct: 239  SNGLKSVPGGQSQKDEPSMAEISKDVSSAVRGAMEGSPLKNERKSESLVKSLEEAKQGIG 298

Query: 560  IGNGESRVVIFPEDG---------LEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDPV 712
            +   ES    F   G         LEG  G       SS    G  KR+++  D E D V
Sbjct: 299  VSGNESDEAEFSGGGGGGQEEPSILEGTGGEP-----SSGKGLGSKKRKRSGQDPEIDQV 353

Query: 713  QGGRQSSSETTKENIENKQKVEQ----INSKQTEKNGKDN---SEFVKEGYVHVRARRGQ 871
            +G  Q   E +K+N E + K +Q    + SK T K+GK     S+  KE Y+HVRARRGQ
Sbjct: 354  KGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGKQGAQASDPPKEEYIHVRARRGQ 413

Query: 872  ATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 1051
            ATNSHSLAERVRREKISERMK+LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK
Sbjct: 414  ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 473

Query: 1052 LAAVN 1066
            LA VN
Sbjct: 474  LATVN 478



 Score = 48.9 bits (115), Expect(2) = 2e-57
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 1104 GFSPE--MIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTA--SGYKESPLQ 1259
            GFSPE  M YPQ +PSQ  L+  G+  + + SD  RR I++Q  A   GYKES  Q
Sbjct: 513  GFSPETTMPYPQLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAPQ 568


>ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
            gi|223546170|gb|EEF47672.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 566

 Score =  209 bits (533), Expect(2) = 3e-57
 Identities = 159/419 (37%), Positives = 210/419 (50%), Gaps = 75/419 (17%)
 Frame = +2

Query: 35   EWQFNTP-----AMSMVPLPLSAPSLAGGLMNQNTRSSYLSTPMVEVFSPGQWNHHPTSS 199
            +W+F +      ++ +VP     P   G L+     SS  +  MV+ F PG W+H  T+S
Sbjct: 30   DWRFGSSNITNTSLGLVPTDNQMPVCRGDLLGA---SSCSTASMVDSFGPGLWDHS-TNS 85

Query: 200  PNMA---LGESNFASTSSI--------NSIPVGK----------PVAISPRGMLVSTAPR 316
             N+    +   N  STS+          S+ VG           P ++   G+ + +AP 
Sbjct: 86   LNLGFCDINVQNHPSTSNTIGHRKSGPTSLRVGTDKALQMGWNPPSSMLKGGIFLPSAPG 145

Query: 317  IFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXP------------------AM 442
            + P SL  FP DSAF+ERAAR                  P                    
Sbjct: 146  VLPQSLSQFPADSAFIERAARFSCFNGGNFSDMMNPFGIPESMGLYSRSGGMMQGPQEVF 205

Query: 443  APS-----------NNEGIGDQVQKDELLQVDHESFNGSTMKNQGDQNSQI--------- 562
            A S           NN  I  +  KD  + ++H +  G  +KN+   +S +         
Sbjct: 206  AASGLKTVTGGQGQNNVTIVGETSKDASMSIEHVAIEGP-LKNERKSDSLVRSNDEAKQG 264

Query: 563  --GNG-ESRVVIFPEDGLEGNTGSTDA-ALNSSSSDRGVNKRRKTVPDIERDPVQGGRQS 730
              G+G ES    F   G +    + +   +  S+   G+ KR++   DIE D  +G  QS
Sbjct: 265  AGGSGDESEEAEFSGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQDIELDQAKGNLQS 324

Query: 731  SSETTKENIENKQKVEQINS----KQTEKNGKDNSEFV---KEGYVHVRARRGQATNSHS 889
              E  K+N+E +QK +Q  +    K + K GK  S+     KE Y+HVRARRGQATNSHS
Sbjct: 325  V-EAAKDNVEAQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHS 383

Query: 890  LAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            LAERVRREKISERMK+LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 384  LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 442



 Score = 40.8 bits (94), Expect(2) = 3e-57
 Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 1107 FSPEMI--YPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST-ASGYKESPLQ 1259
            FSP+MI  YP    SQ  L+      M SHSD  RR IS+Q T  SG  + P Q
Sbjct: 470  FSPDMIMAYPPFNTSQPGLIQASFPGMESHSDVLRRTISSQLTPLSGVFKEPTQ 523


>gb|EOY01544.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
            isoform 1 [Theobroma cacao]
          Length = 581

 Score =  201 bits (510), Expect(2) = 2e-55
 Identities = 155/417 (37%), Positives = 203/417 (48%), Gaps = 73/417 (17%)
 Frame = +2

Query: 35   EWQFNTPAMSMVPLPLSA---PSLAGGLMNQNTRSSYLSTPMVEVFSPGQWNHHPTSSPN 205
            +WQF    ++  P+ L +   P   G        SS  S  +V+ F    W H  ++S N
Sbjct: 29   DWQFGGANLTSTPMSLVSSDNPMAIG--------SSCASASVVDSFGTSLWEH-TSNSQN 79

Query: 206  MALGESNFAS-TSSINSIPVGK-----------PVAISPR--------GMLVSTAPRIFP 325
            +   + N  +  SS N + +GK           P  +S          G+ +  A  I P
Sbjct: 80   LGFCDINAQNGASSSNGMGIGKGGNSLRSTIDRPFDMSWNAASSMLRGGIFLPNATGILP 139

Query: 326  TSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIG------------ 469
             SL   P DSAF++RAAR                  P        G+G            
Sbjct: 140  QSLSQLPADSAFIDRAARFSSFNGGNFSDMVNPFGIPESMGLYTRGVGLMQGPQDIFAIS 199

Query: 470  -----------------DQVQKDELLQVDHESFNGSTMKNQ--------GDQNSQIGNG- 571
                              +  KD  LQV++ +   S +KN+         ++ ++ GNG 
Sbjct: 200  GMKSVSVVESEKSKLNSTEASKDASLQVENRATQESPLKNEKKSESLVPSNEEAKQGNGG 259

Query: 572  ---ESRVVIFPE--DGLEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDPVQGGRQSSS 736
               ES    F     G +  +   D +L  S+      KR+++V D E D V+GG +   
Sbjct: 260  SGNESDEAEFSGGIGGQDEPSALDDLSLEPSAKGLSSKKRKRSVQDAEVDQVKGG-EPPV 318

Query: 737  ETTKENIENKQKVEQIN----SKQTEKNGKDNSEF---VKEGYVHVRARRGQATNSHSLA 895
            E  K+N EN++K +Q      +K T K GK  S+     KE Y+HVRARRGQATNSHSLA
Sbjct: 319  EAAKDNAENQKKGDQNQTTTINKTTGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLA 378

Query: 896  ERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            ERVRREKISERMK+LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 379  ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 435



 Score = 43.9 bits (102), Expect(2) = 2e-55
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +3

Query: 1104 GFSPEMI--YPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            GFSP+M   YP  +PSQ  LV   +  M + SD  RR +S+Q T    GYKE
Sbjct: 461  GFSPDMSVGYPSLHPSQPGLVQAALPVMGNTSDVIRRTLSSQFTPMTGGYKE 512


>gb|EOY01545.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
            isoform 2 [Theobroma cacao]
          Length = 556

 Score =  201 bits (510), Expect(2) = 2e-55
 Identities = 155/417 (37%), Positives = 203/417 (48%), Gaps = 73/417 (17%)
 Frame = +2

Query: 35   EWQFNTPAMSMVPLPLSA---PSLAGGLMNQNTRSSYLSTPMVEVFSPGQWNHHPTSSPN 205
            +WQF    ++  P+ L +   P   G        SS  S  +V+ F    W H  ++S N
Sbjct: 29   DWQFGGANLTSTPMSLVSSDNPMAIG--------SSCASASVVDSFGTSLWEH-TSNSQN 79

Query: 206  MALGESNFAS-TSSINSIPVGK-----------PVAISPR--------GMLVSTAPRIFP 325
            +   + N  +  SS N + +GK           P  +S          G+ +  A  I P
Sbjct: 80   LGFCDINAQNGASSSNGMGIGKGGNSLRSTIDRPFDMSWNAASSMLRGGIFLPNATGILP 139

Query: 326  TSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIG------------ 469
             SL   P DSAF++RAAR                  P        G+G            
Sbjct: 140  QSLSQLPADSAFIDRAARFSSFNGGNFSDMVNPFGIPESMGLYTRGVGLMQGPQDIFAIS 199

Query: 470  -----------------DQVQKDELLQVDHESFNGSTMKNQ--------GDQNSQIGNG- 571
                              +  KD  LQV++ +   S +KN+         ++ ++ GNG 
Sbjct: 200  GMKSVSVVESEKSKLNSTEASKDASLQVENRATQESPLKNEKKSESLVPSNEEAKQGNGG 259

Query: 572  ---ESRVVIFPE--DGLEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDPVQGGRQSSS 736
               ES    F     G +  +   D +L  S+      KR+++V D E D V+GG +   
Sbjct: 260  SGNESDEAEFSGGIGGQDEPSALDDLSLEPSAKGLSSKKRKRSVQDAEVDQVKGG-EPPV 318

Query: 737  ETTKENIENKQKVEQIN----SKQTEKNGKDNSEF---VKEGYVHVRARRGQATNSHSLA 895
            E  K+N EN++K +Q      +K T K GK  S+     KE Y+HVRARRGQATNSHSLA
Sbjct: 319  EAAKDNAENQKKGDQNQTTTINKTTGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLA 378

Query: 896  ERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            ERVRREKISERMK+LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 379  ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 435



 Score = 43.9 bits (102), Expect(2) = 2e-55
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +3

Query: 1104 GFSPEMI--YPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            GFSP+M   YP  +PSQ  LV   +  M + SD  RR +S+Q T    GYKE
Sbjct: 461  GFSPDMSVGYPSLHPSQPGLVQAALPVMGNTSDVIRRTLSSQFTPMTGGYKE 512


>gb|EOY01546.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
            isoform 3 [Theobroma cacao] gi|508709650|gb|EOY01547.1|
            Basic helix-loop-helix DNA-binding superfamily protein,
            putative isoform 3 [Theobroma cacao]
          Length = 552

 Score =  201 bits (510), Expect(2) = 2e-55
 Identities = 155/417 (37%), Positives = 203/417 (48%), Gaps = 73/417 (17%)
 Frame = +2

Query: 35   EWQFNTPAMSMVPLPLSA---PSLAGGLMNQNTRSSYLSTPMVEVFSPGQWNHHPTSSPN 205
            +WQF    ++  P+ L +   P   G        SS  S  +V+ F    W H  ++S N
Sbjct: 29   DWQFGGANLTSTPMSLVSSDNPMAIG--------SSCASASVVDSFGTSLWEH-TSNSQN 79

Query: 206  MALGESNFAS-TSSINSIPVGK-----------PVAISPR--------GMLVSTAPRIFP 325
            +   + N  +  SS N + +GK           P  +S          G+ +  A  I P
Sbjct: 80   LGFCDINAQNGASSSNGMGIGKGGNSLRSTIDRPFDMSWNAASSMLRGGIFLPNATGILP 139

Query: 326  TSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIG------------ 469
             SL   P DSAF++RAAR                  P        G+G            
Sbjct: 140  QSLSQLPADSAFIDRAARFSSFNGGNFSDMVNPFGIPESMGLYTRGVGLMQGPQDIFAIS 199

Query: 470  -----------------DQVQKDELLQVDHESFNGSTMKNQ--------GDQNSQIGNG- 571
                              +  KD  LQV++ +   S +KN+         ++ ++ GNG 
Sbjct: 200  GMKSVSVVESEKSKLNSTEASKDASLQVENRATQESPLKNEKKSESLVPSNEEAKQGNGG 259

Query: 572  ---ESRVVIFPE--DGLEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDPVQGGRQSSS 736
               ES    F     G +  +   D +L  S+      KR+++V D E D V+GG +   
Sbjct: 260  SGNESDEAEFSGGIGGQDEPSALDDLSLEPSAKGLSSKKRKRSVQDAEVDQVKGG-EPPV 318

Query: 737  ETTKENIENKQKVEQIN----SKQTEKNGKDNSEF---VKEGYVHVRARRGQATNSHSLA 895
            E  K+N EN++K +Q      +K T K GK  S+     KE Y+HVRARRGQATNSHSLA
Sbjct: 319  EAAKDNAENQKKGDQNQTTTINKTTGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLA 378

Query: 896  ERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            ERVRREKISERMK+LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 379  ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 435



 Score = 43.9 bits (102), Expect(2) = 2e-55
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +3

Query: 1104 GFSPEMI--YPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            GFSP+M   YP  +PSQ  LV   +  M + SD  RR +S+Q T    GYKE
Sbjct: 461  GFSPDMSVGYPSLHPSQPGLVQAALPVMGNTSDVIRRTLSSQFTPMTGGYKE 512


>gb|EMJ26927.1| hypothetical protein PRUPE_ppa003619mg [Prunus persica]
          Length = 561

 Score =  190 bits (482), Expect(2) = 4e-53
 Identities = 144/382 (37%), Positives = 184/382 (48%), Gaps = 69/382 (18%)
 Frame = +2

Query: 128  SSYLSTPMVEVFSPGQWNHHPTSSPNMA----LGESNFASTSSINSIPVGKPVAIS---- 283
            SS  S  MV+ F+P  W+H PT+S ++     +     ASTS    I  G PV++     
Sbjct: 61   SSRPSASMVDSFNPTLWDH-PTNSQDLGGFCDINGQTSASTSDTIGIRKGIPVSLRSGID 119

Query: 284  ---------PRGML-----VSTAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXX 421
                     P  ML     +   P + P SL  FP DSAF+ERAAR              
Sbjct: 120  RPLEMCWNPPNSMLKGGIFLPNGPGMLPQSLSQFPADSAFIERAARFSCFNGGSFSDMLN 179

Query: 422  XXXXP-----------------------------AMAPSNNEGIGDQVQKDELLQVDHES 514
                P                                   NE  G    +D  L ++  +
Sbjct: 180  PFGVPESMSLYSRGGGMMHWTQEVVAGNGSNAVSCAQSQRNEINGGDASRDVTLPIELGT 239

Query: 515  FNGSTMKNQGDQNSQI-GNGESRVVI------FPEDGLEGNTGSTDAALNSSS----SDR 661
              GS +KN+    S +  + E++  +        E    G  G  + ++   +    S +
Sbjct: 240  TEGSPLKNEKKSESLVKSHDEAKHTVGGSGNESDEADFSGGAGQEEPSMLEGTGVEPSSK 299

Query: 662  GVNKRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQINSKQTEKN-------GKDN 820
            G  KR+++    E D  Q   Q   E+ ++  E +QK EQ  +  T K        G   
Sbjct: 300  GSKKRKRSGQANELD--QAHAQQPGESAQDASEFQQKGEQHPASTTNKTTGKQSKQGSQA 357

Query: 821  SEFVKEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEI 1000
            S+  KE Y+HVRARRGQATNSHSLAERVRREKISERMK+LQ+LVPGCSKVTGKAVMLDEI
Sbjct: 358  SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 417

Query: 1001 INYVQSLQRQVEFLSMKLAAVN 1066
            INYVQSLQRQVEFLSMKLA VN
Sbjct: 418  INYVQSLQRQVEFLSMKLATVN 439



 Score = 46.6 bits (109), Expect(2) = 4e-53
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
 Frame = +3

Query: 1104 GFSPEM--IYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            GFSP+M   YPQ +PSQ  L+   +  M S SD  RRA+S+Q T    G+KE
Sbjct: 466  GFSPDMPIAYPQLHPSQSGLIQADLPGMGSPSDILRRAMSSQMTPMTGGFKE 517


>ref|XP_002312366.2| hypothetical protein POPTR_0008s11240g [Populus trichocarpa]
            gi|550332838|gb|EEE89733.2| hypothetical protein
            POPTR_0008s11240g [Populus trichocarpa]
          Length = 567

 Score =  197 bits (502), Expect(2) = 7e-53
 Identities = 150/400 (37%), Positives = 192/400 (48%), Gaps = 75/400 (18%)
 Frame = +2

Query: 92   SLAGGLMNQNTRSSYLSTPMVEVFSPGQWNHHPTSSPNMA---LGESNFASTSSINSIPV 262
            S+  G + +   +S  S  +++ F P  W H PT+S N+    +   N AS+S+   I  
Sbjct: 53   SVCRGDLAEAVAASCSSASVIDSFGPAMWEH-PTNSQNLVFCDINVQNIASSSNTAGIGK 111

Query: 263  GKPVAIS-------------PRGML-----VSTAPRIFPTSLPHFPVDSAFVERAARXXX 388
            G P ++              P  ML     +  A  + P SL  FP DSAF+ERAAR   
Sbjct: 112  GFPASLRNGIDRTLEMGWNPPNPMLKGGNFLPNASGMLPQSLSQFPADSAFIERAARFSC 171

Query: 389  XXXXXXXXXXXXXXXPAMAPSNNEGIGD-----------------------------QVQ 481
                           P      + G G                              +  
Sbjct: 172  FNGGNFSDMGNPFGVPESMGIFSRGGGMMQGPGEVFMGSGMKSVSGGRAPKNVMNAVEAS 231

Query: 482  KDELLQVDHESFNGSTMKNQGDQNSQIGNGESRVVIFPEDGLEGNTGSTDAALNS----- 646
            KD  + V+H +  GS +KN+    S   + +       + G+ G+   +D A  S     
Sbjct: 232  KDVSMSVNHMATEGSPLKNETKSESLARSRDEA-----KQGMGGSGNDSDEAEFSGGGGQ 286

Query: 647  -------------SSSDRGVNKRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQ-- 781
                         S+   G NKR++   D E D  +G  QS+ E  K + E +QK +Q  
Sbjct: 287  DEPSMLEGNCRELSAKSLGSNKRKRNGQDAELDQAKGTPQSA-EPAKGSPETQQKGDQKP 345

Query: 782  --INSKQTEKNGKDNS---EFVKEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQE 946
                SK   K GK  S   +  KE Y+HVRARRGQATNSHSLAERVRREKISERMK+LQ+
Sbjct: 346  TSTTSKDAGKQGKQGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 405

Query: 947  LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 406  LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 445



 Score = 38.1 bits (87), Expect(2) = 7e-53
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +3

Query: 1119 MIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQST--ASGYKE 1247
            M YP ++PSQ  L+ T    M +HSD   R I++Q T   +G+KE
Sbjct: 479  MAYPPSHPSQAGLIPTAFPGMNNHSDIICRTINSQLTPMTAGFKE 523


>gb|EXB44922.1| hypothetical protein L484_026510 [Morus notabilis]
          Length = 570

 Score =  206 bits (523), Expect = 2e-50
 Identities = 147/391 (37%), Positives = 185/391 (47%), Gaps = 78/391 (19%)
 Frame = +2

Query: 128  SSYLSTPMVEVFSPGQWNHHPTSSPNMALGESNFAST-SSINSIPVGKPVAISPR----- 289
            SS  S  MV+ F P  W+HHPTSS N+   E    +  S++N + + K V  S R     
Sbjct: 63   SSCSSASMVDSFVPTLWDHHPTSSQNLGFCEMGVQNNVSALNPLGIRKGVPASLRSGIDR 122

Query: 290  ---------------GMLVSTAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXXX 424
                           G+ +   P + P  L   P DSAF+ERAAR               
Sbjct: 123  TLDMCWNPSSSLLKGGIFLPNMPGMLPQGLSQLPADSAFIERAARFSCFNGGNFGDMVNP 182

Query: 425  XXXPAMAPSNNEGIG------------------------------DQVQKDELLQVDHES 514
               P      + G G                               +V +D  + V+  +
Sbjct: 183  FAIPEPMGVYSRGGGMIHGAQEVLAGNGVRPVSGMNSQRNELNNASEVSRDASVTVEPGA 242

Query: 515  FNGSTMKNQGDQNSQIGNGESRVVIFPEDGLEGNTGSTDAALNSS--------------- 649
               S +KN+    SQ G     V    + G+ G+   +D A  SS               
Sbjct: 243  IEVSPLKNERKSESQ-GKSHDEV----KQGVGGSGNESDEAEYSSGVGVGQEELSMLEGN 297

Query: 650  -----SSDRGVNKRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQINSKQTEKN-- 808
                 +   G  KR++  PD + +  +G  Q   E+ K+N E +QK +Q  S  T K   
Sbjct: 298  GGEAATKGLGAKKRKRNGPDSDLEQAKGASQQHGESAKDNTELQQKGDQNPSTTTNKTSG 357

Query: 809  -----GKDNSEFVKEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVT 973
                 G   S+  KE Y+HVRARRGQATNSHSLAERVRREKISERMK+LQ+LVPGCSKVT
Sbjct: 358  KHGKQGSPASDPTKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 417

Query: 974  GKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            GKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 418  GKAVMLDEIINYVQSLQRQVEFLSMKLATVN 448


>ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
            gi|241923769|gb|EER96913.1| hypothetical protein
            SORBIDRAFT_02g027430 [Sorghum bicolor]
          Length = 438

 Score =  188 bits (477), Expect(2) = 4e-50
 Identities = 134/316 (42%), Positives = 168/316 (53%), Gaps = 15/316 (4%)
 Frame = +2

Query: 164  SPGQWNHHPTSSPNMALGESNFASTSSINSIP-VGKPVAISPRGMLVSTAPRIFPTSLPH 340
            +P Q    P      A     +ASTS   ++  VG   A    G  ++  P   P  L H
Sbjct: 38   APPQQQQVPMMDSAFASAAGLWASTSQAMALSDVGAMSAARGGGGFLAPVPGFLPQGLGH 97

Query: 341  FPVDSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIGDQVQKDELLQVDHESFN 520
            FPVDS F+ERAAR                    M  +   G  D        Q  + +F+
Sbjct: 98   FPVDSGFIERAARASCFGGGGG----------VMGATAGYGTADH-------QTMNNAFS 140

Query: 521  GSTMKNQGDQNSQIGNGESRVVIFPEDGLEGNTG--STDAALNSSSSDRGVNKRRKTVPD 694
            GS+ +   D   + GN +      PE G  G+ G  S++AA    SS    + +++  P+
Sbjct: 141  GSS-EALLDHQRKDGNDKGE----PELGRNGHDGVLSSEAAAGDCSSKGTSDSKKRRRPN 195

Query: 695  IERDPVQGGRQSSS-----ETTKENIENKQKVEQIN-------SKQTEKNGKDNSEFVKE 838
                 V GG Q  S     ++  E++ +K K E+ +        K   K  K+ SE  KE
Sbjct: 196  ----EVMGGDQVQSANLPADSANESVHSKDKGEESSPATTTGPGKSKGKGAKETSESQKE 251

Query: 839  GYVHVRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQS 1018
             Y+HVRARRGQATNSHSLAER+RREKISERMK LQ+LVPGCSKVTGKAVMLDEIINYVQS
Sbjct: 252  DYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 311

Query: 1019 LQRQVEFLSMKLAAVN 1066
            LQRQVEFLSMKLA VN
Sbjct: 312  LQRQVEFLSMKLATVN 327



 Score = 38.5 bits (88), Expect(2) = 4e-50
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = +3

Query: 1104 GFSPEMIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTA 1232
            GFSPEM++PQ   SQ  L+  G + MA + D FRR +  Q +A
Sbjct: 354  GFSPEMMHPQLQLSQPGLIQGGAAGMA-NPDVFRRIMQAQLSA 395


>gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
          Length = 809

 Score =  182 bits (461), Expect(2) = 1e-49
 Identities = 126/305 (41%), Positives = 156/305 (51%), Gaps = 7/305 (2%)
 Frame = +2

Query: 173  QWNHHPTSSPNMALGESNFASTSSINSIPVGKPVAISPRGM-LVSTAPRIFPTSLPHFPV 349
            Q   H       A     +AS+  ++++    P    PRG   ++  P      L HFPV
Sbjct: 425  QHQQHAMMDSFAAASAGLWASSDVVSAMSSAAP----PRGAGFLAPVPGFLQQGLGHFPV 480

Query: 350  DSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIGDQVQKDELLQVDHESFNGST 529
            DS F+ERAAR                    M      G  DQ   D           G T
Sbjct: 481  DSGFIERAARSTCFGG-------------GMMAGGPYGAADQAMGDAF---------GGT 518

Query: 530  MKNQGDQNSQIGNGESRVVIFPEDGLEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDP 709
             +   D +  +GN ++    F  +G +    S  A  + SS      KRR+    +  D 
Sbjct: 519  AEGLMDHHRNVGNDKAEE--FAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQ 576

Query: 710  VQGGRQSSSETTKENIENKQKVEQINSKQTE------KNGKDNSEFVKEGYVHVRARRGQ 871
            V      S ++  E++ +K K E+ +   T       K  K+ SE  KE Y+HVRARRGQ
Sbjct: 577  VHSSNLPS-DSANESVHSKDKGEESSPATTNGGKSKGKGAKETSESQKEEYIHVRARRGQ 635

Query: 872  ATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 1051
            ATNSHSLAER+RREKISERMK LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK
Sbjct: 636  ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 695

Query: 1052 LAAVN 1066
            LA VN
Sbjct: 696  LATVN 700



 Score = 43.1 bits (100), Expect(2) = 1e-49
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +3

Query: 1104 GFSPEMIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTASGYKESP 1253
            GFSPEM++PQ   SQ  L+H G + MA + D FRR I  Q  A    + P
Sbjct: 727  GFSPEMMHPQLQLSQPGLIHGGTAGMA-NPDVFRRIIQAQLGAKDGSQMP 775


>ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
            gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza
            sativa Japonica Group] gi|113631688|dbj|BAF25369.1|
            Os09g0474100 [Oryza sativa Japonica Group]
            gi|215768249|dbj|BAH00478.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|323388941|gb|ADX60275.1|
            bHLH- transcription factor [Oryza sativa Japonica Group]
          Length = 428

 Score =  182 bits (461), Expect(2) = 1e-49
 Identities = 126/305 (41%), Positives = 156/305 (51%), Gaps = 7/305 (2%)
 Frame = +2

Query: 173  QWNHHPTSSPNMALGESNFASTSSINSIPVGKPVAISPRGM-LVSTAPRIFPTSLPHFPV 349
            Q   H       A     +AS+  ++++    P    PRG   ++  P      L HFPV
Sbjct: 44   QHQQHAMMDSFAAASAGLWASSDVVSAMSSAAP----PRGAGFLAPVPGFLQQGLGHFPV 99

Query: 350  DSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIGDQVQKDELLQVDHESFNGST 529
            DS F+ERAAR                    M      G  DQ   D           G T
Sbjct: 100  DSGFIERAARSTCFGG-------------GMMAGGPYGAADQAMGDAF---------GGT 137

Query: 530  MKNQGDQNSQIGNGESRVVIFPEDGLEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDP 709
             +   D +  +GN ++    F  +G +    S  A  + SS      KRR+    +  D 
Sbjct: 138  AEGLMDHHRNVGNDKAEE--FAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQ 195

Query: 710  VQGGRQSSSETTKENIENKQKVEQINSKQTE------KNGKDNSEFVKEGYVHVRARRGQ 871
            V      S ++  E++ +K K E+ +   T       K  K+ SE  KE Y+HVRARRGQ
Sbjct: 196  VHSSNLPS-DSANESVHSKDKGEESSPATTNGGKSKGKGAKETSESQKEEYIHVRARRGQ 254

Query: 872  ATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 1051
            ATNSHSLAER+RREKISERMK LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK
Sbjct: 255  ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 314

Query: 1052 LAAVN 1066
            LA VN
Sbjct: 315  LATVN 319



 Score = 43.1 bits (100), Expect(2) = 1e-49
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +3

Query: 1104 GFSPEMIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTASGYKESP 1253
            GFSPEM++PQ   SQ  L+H G + MA + D FRR I  Q  A    + P
Sbjct: 346  GFSPEMMHPQLQLSQPGLIHGGTAGMA-NPDVFRRIIQAQLGAKDGSQMP 394


>tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 434

 Score =  183 bits (465), Expect(2) = 3e-49
 Identities = 133/326 (40%), Positives = 172/326 (52%), Gaps = 24/326 (7%)
 Frame = +2

Query: 161  FSPGQWNHHPTSSPNMALGESNFASTSSINSIPVGKPVAISPRGM-------LVSTAPRI 319
            FS   ++  P     + + +S FAS     S    + +A+S  G         ++  P  
Sbjct: 27   FSAAAFSCAPPQQQQVPMMDSAFASAGLWAS--TSQAMALSDAGGRSAARAGFLAPVPGF 84

Query: 320  FPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIGDQVQKDELLQ 499
             P  L HFPVDS F+ERAAR                     A     G G  V       
Sbjct: 85   LPQGLAHFPVDSGFIERAAR---------------------ASCFGGGGGGGVMAAFGAA 123

Query: 500  VDHE----SFNGSTMKNQGDQNSQIGNGESRVVIFPEDGLEGNTG--STDAALNSSSSDR 661
             DH+    +F+GS+      Q ++ G+ +      PE G  G+ G  S++AA     S +
Sbjct: 124  ADHQPMNSAFSGSSEALLDHQRTKDGSDKGE----PELGRNGHDGVLSSEAAAAGDCSSK 179

Query: 662  GVN---KRRKTVPDIERDPVQGGRQSSSETTKENIENKQKVEQIN--------SKQTEKN 808
            G +   KRR+    +  D VQ     + ++  E++ +K K E+ +         K   K 
Sbjct: 180  GTSDSKKRRRPNEVMGGDQVQSSNLPA-DSANESVHSKDKGEESSLATTTTGPGKSKGKG 238

Query: 809  GKDNSEFVKEGYVHVRARRGQATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVM 988
             ++ SE  KE Y+HVRARRGQATNSHSLAER+RREKISERMK LQ+LVPGCSKVTGKAVM
Sbjct: 239  ARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVM 298

Query: 989  LDEIINYVQSLQRQVEFLSMKLAAVN 1066
            LDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 299  LDEIINYVQSLQRQVEFLSMKLATVN 324



 Score = 40.0 bits (92), Expect(2) = 3e-49
 Identities = 21/50 (42%), Positives = 29/50 (58%)
 Frame = +3

Query: 1104 GFSPEMIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTASGYKESP 1253
            GFSPEM++PQ   SQ  L+  G + MA + D FRR +  Q +A    + P
Sbjct: 351  GFSPEMMHPQLQLSQPGLIQGGAAGMA-NPDVFRRIMQAQLSAKDGSQMP 399


>ref|XP_004490333.1| PREDICTED: transcription factor bHLH49-like [Cicer arietinum]
          Length = 534

 Score =  201 bits (511), Expect = 5e-49
 Identities = 146/362 (40%), Positives = 186/362 (51%), Gaps = 49/362 (13%)
 Frame = +2

Query: 128  SSYLSTPMVEVFSPGQWNHHPTSSPNMALGESNFASTSS--INSIPVGKPVAISPRGMLV 301
            SS  S  MV+ FSP  W+H PT+S N+   + N +S+++  I     G      P G   
Sbjct: 58   SSCSSASMVDTFSPNFWDH-PTNSQNLGFCDINGSSSNAAGIRKDGFGFGDGFLPNGQ-- 114

Query: 302  STAPRIFPTSLPHFPVDSAFVERAARXXXXXXXXXXXXXXXXXXP-----------AMAP 448
                 +F  SL  FP DS F+ERAAR                  P           A+  
Sbjct: 115  ----GVFQNSLSQFPTDSGFIERAARFSCFGGGNFGDVVSSYGIPQSIGMYGGTVSAIHG 170

Query: 449  SNNE--------GIGDQVQ----------KDELLQVDHESFNGSTMKNQGDQNSQIGN-- 568
            + +E         IG Q Q          K     ++H +  GS +KN    +  + +  
Sbjct: 171  NRDELAGIGLKVAIGGQSQDIDPNVVEATKAVSPLIEHMATQGSPLKNDRSDSRVVSHDD 230

Query: 569  GESRVVIFPEDGLEGNTGSTDA------------ALNSSSSDRGVN--KRRKTVPDIERD 706
            G+  +V    D   G +G  D               +   S +G+N  KR++  PD + D
Sbjct: 231  GKQALVRPVNDSDRGESGDDDGDGCGQDDSPMLEGTSGEPSVKGLNSKKRKRNGPDADND 290

Query: 707  PVQGGRQSSSETTKENIENKQKVEQIN--SKQTEKNGKDNSEFVKEGYVHVRARRGQATN 880
                 ++  SE  K+N E++QK +Q    S +  K G   S+  KE Y+HVRARRGQATN
Sbjct: 291  RANRTQELQSEGAKDNPEHQQKGDQQPKASGKNAKQGSQTSDPPKEEYIHVRARRGQATN 350

Query: 881  SHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAA 1060
            SHSLAERVRREKISERMK+LQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 
Sbjct: 351  SHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 410

Query: 1061 VN 1066
            VN
Sbjct: 411  VN 412


>gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
          Length = 428

 Score =  179 bits (455), Expect(2) = 6e-49
 Identities = 125/305 (40%), Positives = 155/305 (50%), Gaps = 7/305 (2%)
 Frame = +2

Query: 173  QWNHHPTSSPNMALGESNFASTSSINSIPVGKPVAISPRGM-LVSTAPRIFPTSLPHFPV 349
            Q   H       A     +AS+  ++++    P    PRG   ++  P      L HFPV
Sbjct: 44   QHQQHAMMDSFAAASAGLWASSDVVSAMSSAAP----PRGAGFLAPVPGFLQQGLGHFPV 99

Query: 350  DSAFVERAARXXXXXXXXXXXXXXXXXXPAMAPSNNEGIGDQVQKDELLQVDHESFNGST 529
            DS F+ERAAR                    M      G  DQ   D           G T
Sbjct: 100  DSGFIERAARSTCFGG-------------GMMAGGPYGAADQAMGDAF---------GGT 137

Query: 530  MKNQGDQNSQIGNGESRVVIFPEDGLEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDP 709
             +   D +  +GN ++    F  +G +    S  A  + SS      KRR+    +  D 
Sbjct: 138  AEGLMDHHRNVGNDKAEE--FAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQ 195

Query: 710  VQGGRQSSSETTKENIENKQKVEQINSKQTE------KNGKDNSEFVKEGYVHVRARRGQ 871
            V      S ++  E++ +K K E+ +   T       K  K+  E  KE Y+HVRARRGQ
Sbjct: 196  VHSSNLPS-DSANESVHSKDKGEESSPATTNGGKSKGKGAKETYESQKEEYIHVRARRGQ 254

Query: 872  ATNSHSLAERVRREKISERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 1051
            ATNSHSLAER+RREKISERMK LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK
Sbjct: 255  ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 314

Query: 1052 LAAVN 1066
            LA VN
Sbjct: 315  LATVN 319



 Score = 43.1 bits (100), Expect(2) = 6e-49
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +3

Query: 1104 GFSPEMIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTASGYKESP 1253
            GFSPEM++PQ   SQ  L+H G + MA + D FRR I  Q  A    + P
Sbjct: 346  GFSPEMMHPQLQLSQPGLIHGGTAGMA-NPDVFRRIIQAQLGAKDGSQMP 394


>ref|XP_006660739.1| PREDICTED: transcription factor bHLH49-like [Oryza brachyantha]
          Length = 434

 Score =  181 bits (459), Expect(2) = 2e-48
 Identities = 125/289 (43%), Positives = 155/289 (53%), Gaps = 7/289 (2%)
 Frame = +2

Query: 221  SNFASTSSINSIPVGKPVAISPRGM-LVSTAPRIFPTSLPHFPVDSAFVERAARXXXXXX 397
            +N A +S ++++    P    PRG   ++  P      L HFPVDS F+ERAAR      
Sbjct: 61   ANMALSSDVSAMSSAAP----PRGAGFLAPVPGFLQQGLGHFPVDSGFIERAARSTCFGA 116

Query: 398  XXXXXXXXXXXXPAMAPSNNEGIGDQVQKDELLQVDHESFNGSTMKNQGDQNSQIGNGES 577
                          M  ++  G  DQ   D        +F G+T           GN ++
Sbjct: 117  SGG----------GMMGASAYGAADQSMGD--------AFGGATEGLMDHHRRNDGNDKA 158

Query: 578  RVVIFPEDGLEGNTGSTDAALNSSSSDRGVNKRRKTVPDIERDPVQGGRQSSSETTKENI 757
                F  +G +    S  A  + SS      KRR+    I  D V      S ++  E++
Sbjct: 159  EQE-FAGNGHDELPSSEVAGGDCSSKGSDSKKRRRPNEVIGADQVHSSNLPS-DSANESV 216

Query: 758  ENKQKVEQINSKQTE------KNGKDNSEFVKEGYVHVRARRGQATNSHSLAERVRREKI 919
             +K K E+ +   T       K  K+ SE  KE Y+HVRARRGQATNSHSLAER+RREKI
Sbjct: 217  HSKDKGEESSPATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHSLAERLRREKI 276

Query: 920  SERMKYLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 1066
            SERMK LQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN
Sbjct: 277  SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 325



 Score = 40.0 bits (92), Expect(2) = 2e-48
 Identities = 22/50 (44%), Positives = 28/50 (56%)
 Frame = +3

Query: 1104 GFSPEMIYPQAYPSQHNLVHTGISAMASHSDTFRRAISTQSTASGYKESP 1253
            GFSPEM++PQ   SQ  L+  G + MA + D FRR I  Q  A    + P
Sbjct: 352  GFSPEMMHPQLQLSQPGLIQGGAAGMA-NPDVFRRIIQAQLGAKDGSQMP 400