BLASTX nr result
ID: Zingiber25_contig00007079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00007079
(2195 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002443890.1| hypothetical protein SORBIDRAFT_07g003870 [S... 254 1e-64
ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27... 251 9e-64
gb|ADU60099.1| circadian clock associated protein 1 [Zea mays] 249 5e-63
gb|AFW61192.1| putative MYB DNA-binding domain superfamily prote... 248 8e-63
ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Seta... 239 5e-60
ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26... 239 5e-60
ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group] g... 239 5e-60
gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indi... 236 3e-59
ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Ory... 234 1e-58
dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group] 232 4e-58
ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Ory... 228 6e-57
gb|AAR20887.1| circadian oscillator component [Oryza sativa Japo... 219 4e-54
gb|ADW09013.1| LHY [Triticum aestivum] 214 1e-52
dbj|BAJ92173.1| predicted protein [Hordeum vulgare subsp. vulgar... 213 4e-52
ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium di... 212 5e-52
gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare sub... 211 1e-51
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa] 204 1e-49
ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cice... 199 3e-48
ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circ... 199 5e-48
gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [T... 198 7e-48
>ref|XP_002443890.1| hypothetical protein SORBIDRAFT_07g003870 [Sorghum bicolor]
gi|241940240|gb|EES13385.1| hypothetical protein
SORBIDRAFT_07g003870 [Sorghum bicolor]
Length = 747
Score = 254 bits (649), Expect = 1e-64
Identities = 220/724 (30%), Positives = 316/724 (43%), Gaps = 103/724 (14%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE+VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 29 EVNSSGEEMVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 88
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG DIDI + S +P+ +
Sbjct: 89 RSHAQKFFTKLEKEAMTNGTSPGQALDIDIPPPRPKRKPNNPYPRKSGLSSETPTKDFPN 148
Query: 469 AGSKPPNP------ICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 624
S PN + + DA+ +K + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 149 DKSAKPNMPLSNGNVQMAGDASLQKFQRKELSEKGSCSEVLNLFRDAPSASFSSVNKSSS 208
Query: 625 S---PVLMEFLPT----VRSLKENVAVDNPVLPINTFNEATLVYQGNVLIQGSCMSSNNN 783
+ P +E T + ++ N N + ++ + ++ I C S+
Sbjct: 209 NHGAPRGVEASKTEIRDMTIMENNSLNPNMQEDVKEISDHEMERLNSIQISSKCEHSHEG 268
Query: 784 IVDVE--------GSISNYHVS--SIKQAHSVGINRSKEKNEQTLT-------SSDQPGP 912
+D+ S+ +V + + +HS+ T T +SDQ G
Sbjct: 269 YLDLSMQQMKLKPKSVETTYVDKQTARASHSLAEKNGTASILVTATEGTHSDQTSDQVGI 328
Query: 913 AAAVSPSMG--LKHSPXXXXXXXXXXXXXXX--FSPVVQYNNQRESCDAFLNMSSAFSNL 1080
+++P + L P F+P++Q N +++ +F+NMSS FS++
Sbjct: 329 NGSINPCIHPMLSSDPKFDSSATPQHFPHNYAAFAPMMQGNCNQDTYRSFVNMSSTFSSM 388
Query: 1081 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTPSLVTAT 1260
++STL P++HAAA LAASY P+ E + + N E + R + PS S+V AT
Sbjct: 389 LVSTLLSNPAIHAAARLAASYWPAAEGNTLIDPNQENPADDVQGRNIGSPPSMASIVAAT 448
Query: 1261 IXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAH--- 1431
+ QG++P+ TP ++ F +P + + PV +
Sbjct: 449 VAAASAWWATQGLLPFFTPPMAFPFVPAPSAAFPTVD-----VPRPSEKDRDFPVENAQK 503
Query: 1432 --QSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------N 1536
Q + +D S KGE S +EL N
Sbjct: 504 ECQEAQKQGQFEGLRVAASSVSDGSGKGEVSLHTELKISPVQNADATPTTGADTSDAFRN 563
Query: 1537 QAKANRLQC---IVASENTIPDELETDEDNKTKRF------------IGEARDRSNGVMG 1671
+ K +R C +S + D + EDN ++ R RS+G
Sbjct: 564 KKKQDRSSCGSNTPSSSDVDADNVPEKEDNANEKVKQASCSNSSAGDTNHRRFRSSGSTS 623
Query: 1672 QSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV----------- 1797
SW +SE+ F A R P + VA+ + T V
Sbjct: 624 DSWKEVSEEGRLAFDALFSREKLPQSFSPPQAEDSKEVAKEEENEVTTVAVDLNKNATSI 683
Query: 1798 -----XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETGNKRICLPE 1959
H K+ ++ FKPYKRCSVEAKEN+ +E G KRI L
Sbjct: 684 DHDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLES 743
Query: 1960 EA*T 1971
EA T
Sbjct: 744 EAST 747
>ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27662.1| LHY protein [Zea
mays]
Length = 720
Score = 251 bits (641), Expect = 9e-64
Identities = 219/734 (29%), Positives = 308/734 (41%), Gaps = 113/734 (15%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EMNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPN 121
Query: 469 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 624
S PN + + DA+ + + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 122 DKSTKPNMPLSNGHVKMVGDASLQNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSS 181
Query: 625 SPVLMEFLPTVRSLKENVAVDNPVLPINTFNEAT-----------LVYQGNVLIQGSCMS 771
+ P + + D ++ N+FN T + + I+ C
Sbjct: 182 N----HGAPRRTEASKTESRDMSIMENNSFNPNTQEDVKVISDQEMERLNGIQIRSKCEH 237
Query: 772 SNNNIVDVE--------GSISNYHV--SSIKQAHSVGINRSKEKNEQTL-------TSSD 900
S+ +D+ S+ +V + + +H++ + T+ +SD
Sbjct: 238 SHEGYLDISTQQMKLMPKSVETTYVDEQTARASHTLAESNGTASVPVTVPEGTHPDQTSD 297
Query: 901 QPG----------PAAAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAF 1050
Q G P + P G +P F+P++Q N +++ +F
Sbjct: 298 QVGINGSMNPCIHPMVSADPKFGSSATP------QTFPHNYAAFAPMMQCNCNQDTYRSF 351
Query: 1051 LNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS 1230
NMSS FS++++STL P++HAAA LAASY P+ E + + N E R +
Sbjct: 352 TNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSP 411
Query: 1231 PSTPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEM 1410
PS S+V AT+ QG++P+ P ++ F +P + +
Sbjct: 412 PSMASIVAATVAAASAWWATQGLLPFFAPPVAFPFVPAPSAAFPTVD-----VPRPSEKD 466
Query: 1411 MQVPVAH-----QSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-------------- 1533
PV + Q + +D S KGE S +EL
Sbjct: 467 RDCPVENAQNECQEARKQVQFEGLRVAASSESDGSGKGEVSLHTELKLSPAQNADATPTT 526
Query: 1534 ---------NQAKANRLQC-------IVASENTIPDELETDE-------DNKTKRFIGEA 1644
N+ K +R C +P+E +E N +
Sbjct: 527 GAGTNDAFRNKKKQDRSSCGSNTPSSSDVDAGNVPEEDNANEKAKQASCSNSSAGDTNHR 586
Query: 1645 RDRSNGVMGQSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV-- 1797
R RSNG SW +SE+ F A R P + VA+ + T V
Sbjct: 587 RFRSNGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAV 646
Query: 1798 ---------------XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREE 1929
H K+ ++ FKPYKRCSVEAKEN+ T +
Sbjct: 647 DLNKNATSIDHDDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPTSDM 706
Query: 1930 TGNKRICLPEEA*T 1971
G KRI L EA T
Sbjct: 707 VGTKRIRLDSEAST 720
>gb|ADU60099.1| circadian clock associated protein 1 [Zea mays]
Length = 720
Score = 249 bits (635), Expect = 5e-63
Identities = 218/734 (29%), Positives = 307/734 (41%), Gaps = 113/734 (15%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EH FL+ALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EMNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLDALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPN 121
Query: 469 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 624
S PN + + DA+ + + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 122 DKSTKPNMPLSNGHVKMVGDASLQNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSS 181
Query: 625 SPVLMEFLPTVRSLKENVAVDNPVLPINTFNEAT-----------LVYQGNVLIQGSCMS 771
+ P + + D ++ N+FN T + + I+ C
Sbjct: 182 N----HGAPRRTEASKTESRDMSIMENNSFNPNTQEDVKVISDQEMERLNGIQIRSKCEH 237
Query: 772 SNNNIVDVE--------GSISNYHV--SSIKQAHSVGINRSKEKNEQTL-------TSSD 900
S+ +D+ S+ +V + + +H++ + T+ +SD
Sbjct: 238 SHEGYLDISTQQMKLMPKSVETTYVDEQTARASHTLAESNGTASVPVTVPEGTHPDQTSD 297
Query: 901 QPG----------PAAAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAF 1050
Q G P + P G +P F+P++Q N +++ +F
Sbjct: 298 QVGINGSMNPCIHPMVSADPKFGSSATP------QTFPHNYAAFAPMMQCNCNQDTYRSF 351
Query: 1051 LNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS 1230
NMSS FS++++STL P++HAAA LAASY P+ E + + N E R +
Sbjct: 352 TNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSP 411
Query: 1231 PSTPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEM 1410
PS S+V AT+ QG++P P ++ F +P + +
Sbjct: 412 PSMASIVAATVAAASAWWATQGLLPLFAPPVAFPFVPAPSAAFPTVD-----VPRPSEKD 466
Query: 1411 MQVPVAH-----QSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-------------- 1533
PV + Q + +D S KGE S +EL
Sbjct: 467 RDCPVENAQNECQEARKQVQFEGLRVAASSESDGSGKGEVSLHTELKLSPAQNADATPTT 526
Query: 1534 ---------NQAKANRLQC-------IVASENTIPDELETDE-------DNKTKRFIGEA 1644
N+ K +R C +P+E +E N +
Sbjct: 527 GAGTNDAFRNKKKQDRSSCGSNTPSSSDVDAGNVPEEDNANEKAKQASCSNSSAGDTNHR 586
Query: 1645 RDRSNGVMGQSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV-- 1797
R RSNG SW +SE+ F A R P + VA+ + T V
Sbjct: 587 RFRSNGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAV 646
Query: 1798 ---------------XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREE 1929
H K+ ++ FKPYKRCSVEAKEN+ T +
Sbjct: 647 DLNKNATSIDHDDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPTSDM 706
Query: 1930 TGNKRICLPEEA*T 1971
G KRI L EA T
Sbjct: 707 VGTKRIRLDSEAST 720
>gb|AFW61192.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 720
Score = 248 bits (633), Expect = 8e-63
Identities = 215/729 (29%), Positives = 301/729 (41%), Gaps = 108/729 (14%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EVNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPN 121
Query: 469 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 624
S PN + + DA+ + + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 122 DKSTKPNMPLSNGHVKMVGDASLQNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSS 181
Query: 625 SPVLMEFLPTVRSLKENVAVDNPVLPINTFNEAT-----------LVYQGNVLIQGSCMS 771
+ P + + D ++ N+FN T + + I+ C
Sbjct: 182 N----HGAPRRTEASKTESRDMSIMENNSFNPNTQEDVKVISDQEMERLNGIQIRSKCEH 237
Query: 772 SNNNIVDVE--------GSISNYHV--SSIKQAHSVGINRSKEKNEQTL-------TSSD 900
S+ +D+ S+ +V + + +H++ + T+ +SD
Sbjct: 238 SHEGYLDISTQQMKLMPKSVETTYVDEQTARASHTLAESDGTASIPVTVPEGTHPDQTSD 297
Query: 901 QPG----------PAAAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAF 1050
Q G P + P G +P F+P++Q N +++ +F
Sbjct: 298 QVGINGSMNPCIHPMVSADPKFGSSATP------QTFPHNYAAFAPMMQCNCNQDTYRSF 351
Query: 1051 LNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS 1230
NMSS FS++++STL P++HAAA LAASY P+ E + + N E R +
Sbjct: 352 TNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSP 411
Query: 1231 PSTPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEM 1410
PS S+V AT+ QG++P+ P ++ F
Sbjct: 412 PSMVSIVAATVAAASAWWATQGLLPFFAPPVAFPFVPAPSAAFPTVDVPRPSEKDRDCPA 471
Query: 1411 MQVPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL------------------- 1533
+ Q + +D S KGE S +EL
Sbjct: 472 ENAQIECQEARKQVQFEGLRIAASSESDGSGKGEVSLHTELKLSPAQNADATPTTGAGTN 531
Query: 1534 ----NQAKANRLQC-------IVASENTIPDELETDE-------DNKTKRFIGEARDRSN 1659
N+ K +R C +P+E +E N + R RSN
Sbjct: 532 DAFRNKKKQDRSSCGSNTPSSSDVDAGNVPEEDNANEKAKQASCSNSSAGDTNHRRFRSN 591
Query: 1660 GVMGQSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV------- 1797
G SW +SE+ F A R P + VA+ + T V
Sbjct: 592 GSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAVDLNKN 651
Query: 1798 ----------XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKTTREE-TGNKR 1944
H K+ ++ FKPYKRCSVEAKEN+ + G KR
Sbjct: 652 ATSIDHDDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPASDMVGTKR 711
Query: 1945 ICLPEEA*T 1971
I L EA T
Sbjct: 712 IRLDSEAST 720
>ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Setaria italica]
gi|514793380|ref|XP_004972799.1| PREDICTED: protein
LHY-like isoform X2 [Setaria italica]
Length = 747
Score = 239 bits (609), Expect = 5e-60
Identities = 210/721 (29%), Positives = 298/721 (41%), Gaps = 103/721 (14%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 29 EVNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 88
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 89 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKNGLSSETPTKELPN 148
Query: 469 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASISN---KGS 621
S N + + D + +K + KE +E G+ S VLN+ + SAS S+ S
Sbjct: 149 DKSSKSNITLSSGNVQMVGDMSLQKFQRKEVSEKGSCSEVLNLFRDAPSASFSSVNKSSS 208
Query: 622 TSPVLMEFLPTVRSLKENVAVD----NPVL--PINTFNEATLVYQGNVLIQGSCMSSNNN 783
+ V PT +++ + NP + + + + + + C SN
Sbjct: 209 NNGVPRGVEPTKTEIRDMTTTEKNSINPTMEEDVKEIDVPEIGRVNGIHVSSKCDYSNEE 268
Query: 784 IVDV---------EGSISNY-HVSSIKQAHSVGINRSKEKNEQTL--------TSSDQPG 909
+D + S + Y + + +HS+ E+N T T DQ G
Sbjct: 269 YLDFSMQQMKLKPKSSETTYVDKQTARTSHSLA-----ERNGATSIPVTGTDGTRPDQTG 323
Query: 910 PAAAVSPSMG------LKHSP--XXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSS 1065
V+ SM L P F+P++Q N +++ +F+NMSS
Sbjct: 324 DQVGVNGSMNPCIHPMLSTDPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTYRSFVNMSS 383
Query: 1066 AFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTPS 1245
FS++++STL P++HAAA LAASY P+ E + + E R + PS S
Sbjct: 384 TFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPVDPTQENPAEGVQGRNLGSPPSMAS 443
Query: 1246 LVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPV 1425
+V AT+ QG++P+ TP ++ F + +
Sbjct: 444 IVAATVAAASAWWATQGLLPFFTPPMAFPFVPAPSAAFTTADVPRPLDKDRDSPVENAQK 503
Query: 1426 AHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------N 1536
Q + +D + KG+ S +EL N
Sbjct: 504 GCQEAQKQGQSEALRVAVSSESDGTRKGDMSLHTELKISPVQNTDAAPTTGADISDAFRN 563
Query: 1537 QAKANRLQC-------IVASENTIPDELETDED--------NKTKRFIGEARDRSNGVMG 1671
+ K +R C +P++ + D N + + RS+G
Sbjct: 564 KKKQDRSSCGSNTPSSSDVEAGNVPEKEDKANDKAKQASCSNSSAGDTNHRKFRSSGSTS 623
Query: 1672 QSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV----------- 1797
SW +SE+ F A R P + VA+ + T V
Sbjct: 624 DSWKEVSEEGRMAFDALFSREKLPQSFSPPQAEESKEVAKEEEDEVTTVTVDLNKNATTI 683
Query: 1798 -----XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETGNKRICLPE 1959
H K+ ++ FKPYKRCSVEAKEN+ +E G KRI L
Sbjct: 684 DHDLDMMDEPRTSFPNELSHLKLKSRKTGFKPYKRCSVEAKENRVPASDEVGTKRIRLES 743
Query: 1960 E 1962
E
Sbjct: 744 E 744
>ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26686.1| LHY protein [Zea
mays]
Length = 718
Score = 239 bits (609), Expect = 5e-60
Identities = 211/723 (29%), Positives = 304/723 (42%), Gaps = 102/723 (14%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EVNSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI + S +P+ E +
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKANSPYPRKSGLSSETPTKELPS 121
Query: 469 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 624
S PN + + DA+ +K + K+ + + S VLN+ + S S S NK S+
Sbjct: 122 DKSTKPNMPLSNENVLMAGDASLQKFQRKKLSGKESCSEVLNLFRDAPSPSFSSVNKSSS 181
Query: 625 S-PVLMEFLPTV---RSLKENVAVD-NPVLPINTFNEATLVYQGNVLIQGSCMSSNNNIV 789
+ +E T ++ EN +++ N + N+ + I C S+ +
Sbjct: 182 NHGAPIEASKTKIRDMTIMENSSLNPNMQEDVKEINDQEMERLNGTQISSKCEHSHEGYL 241
Query: 790 DV-------------------EGSISNYHVSSIKQAHSVGINRSKEKNEQTLTSSDQPGP 912
D+ + + +++ ++ I S+ + ++E + ++ +SDQ G
Sbjct: 242 DISMQQMKLKPESVETTDVDKQTARASHSLAEITGTTSIPVTATEETH--SVLTSDQVGI 299
Query: 913 AAAVSPSMGLKHSP----XXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1080
+++PS+ F+P++Q N +++ + +NMSS FS++
Sbjct: 300 NGSMNPSIHPMFPADPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTHRSLVNMSSTFSSM 359
Query: 1081 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTPSLVTAT 1260
++STL P++HAAA LAASY P+ E + + N E R + PS S+V AT
Sbjct: 360 LVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENLADGVQGRSIGSPPSMASIVAAT 419
Query: 1261 IXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAHQSE 1440
+ QG++P+ P ++ F Q
Sbjct: 420 VAAASAWWATQGLLPFFAPPMAFSFVPAPSAAFPTVDVPRPSEKDRDCPAENAQKECQEA 479
Query: 1441 ILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------NQAKAN 1551
+ D S KGE S +EL N+ K +
Sbjct: 480 RKQGQLEGFRVTASSEYDGSGKGEVSVHTELKISPVQNADATSAAGADTTDAFMNKKKQD 539
Query: 1552 RLQCIVASENTIPDELETDEDN----------KTKRF---------IGEARDRSNGVMGQ 1674
R C NT P + D DN K K+ R RS+G
Sbjct: 540 RSSC---GSNT-PSSSDVDVDNVPEKEGNANEKAKQASCSNSSAGDTNHRRFRSSGSTSD 595
Query: 1675 SWMPISEQNHTTFGASLERRPYDSALHTGVAQTKGGVPTK-----VXXXXXXXXXXXXFK 1839
SW +SE+ F A R + A+ V K
Sbjct: 596 SWKEVSEEGRLVFHALFSREKLPQSFSPPQAEGSKEVGKKEEDEVTTVAVDLNKSTTSID 655
Query: 1840 HG------------------NFKASQSVFKPYKRCSVEAKENKT-TREETGNKRICLPEE 1962
H K+ Q+ FKPYKRCSVEAKEN+ +E G KRI L E
Sbjct: 656 HDLDTIGEPRASFPNELSPLKLKSRQTGFKPYKRCSVEAKENRVPASDEVGTKRIRLDSE 715
Query: 1963 A*T 1971
A T
Sbjct: 716 AST 718
>ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group]
gi|113623001|dbj|BAF22946.1| Os08g0157600 [Oryza sativa
Japonica Group] gi|222639944|gb|EEE68076.1| hypothetical
protein OsJ_26106 [Oryza sativa Japonica Group]
Length = 719
Score = 239 bits (609), Expect = 5e-60
Identities = 222/732 (30%), Positives = 307/732 (41%), Gaps = 111/732 (15%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDI----XXXXXXXXXXXXXXXXTTTGSLSPSG 456
RSHAQKFFTKLEKEA++ G SPG HDIDI + T +
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 457 EEAAAGSKPPNPIC-LKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS 627
++A + N + DA EKL+ KE +E G+ S VLN+ + SAS S NK S++
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSN 181
Query: 628 PVLMEFL-PTVRSLKENVAVDNPVL------PINTFNEATLVYQGNVLIQGSCMSSNNNI 786
L PT +K+ V ++ + N+ + + I S+ N
Sbjct: 182 HGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENC 241
Query: 787 VDV--------EGSISNYHV--SSIKQAH-------SVGINRSKEKNEQTLTSSDQPGPA 915
+D S+ +V S+ K +H G + + +SDQ G A
Sbjct: 242 LDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGA 301
Query: 916 A-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1080
+ + P++ + F+P++Q + +++ +F NMSS FS++
Sbjct: 302 SGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSM 361
Query: 1081 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS--PSTPSLVT 1254
++STL P++HAAA LAASY P+ VDG+ +P + SA+G P+ S+VT
Sbjct: 362 LVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPNMASIVT 418
Query: 1255 ATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAHQ 1434
AT+ QG++P P ++ F + M Q
Sbjct: 419 ATVAAASAWWATQGLLPLFPPPIAFPFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQ 478
Query: 1435 SEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------NQAK 1545
+ D S KGE S +EL N+ K
Sbjct: 479 ETRKQDNFEAMKVIVSSETDESGKGEVSLHTELKISPADKADTKPAAGAETSDVFGNKKK 538
Query: 1546 ANRLQCIVASENTIPDELETDE-----------------------DNKTKRFIGEARDRS 1656
+R C S ++E D DN +RF RS
Sbjct: 539 QDRSSC--GSNTPSSSDIEADNAPENQEKANDKAKQASCSNSSAGDNNHRRF------RS 590
Query: 1657 NGVMGQSWMPISEQNHTTFGA--SLERRPYDSA------------------------LHT 1758
+ SW +SE+ F A S ER P + L+
Sbjct: 591 SASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKEEEDEVTTVTVDLNK 650
Query: 1759 GVAQTKGGVPTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETG 1935
A + T K K+ ++ FKPYKRCSVEAKEN+ +E G
Sbjct: 651 NAAIIDQELDTADEPRASFPNELSNLK---LKSRRTGFKPYKRCSVEAKENRVPASDEVG 707
Query: 1936 NKRICLPEEA*T 1971
KRI L EA T
Sbjct: 708 TKRIRLESEAST 719
>gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indica Group]
Length = 719
Score = 236 bits (602), Expect = 3e-59
Identities = 220/729 (30%), Positives = 303/729 (41%), Gaps = 108/729 (14%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDI----XXXXXXXXXXXXXXXXTTTGSLSPSG 456
RSHAQKFFTKLEKEA++ G SPG HDIDI + T +
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 457 EEAAAGSKPPNPIC-LKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS 627
++A + N + DA EKL+ KE +E G+ S VLN+ + SAS S NK S++
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSN 181
Query: 628 PVLMEFL-PTVRSLKENVAVDNPVL------PINTFNEATLVYQGNVLIQGSCMSSNNNI 786
L PT +K+ V ++ + N+ + + I S+ N
Sbjct: 182 HGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENC 241
Query: 787 VDV--------EGSISNYHV--SSIKQAH-------SVGINRSKEKNEQTLTSSDQPGPA 915
+D S+ +V S+ K +H G + + +SDQ G A
Sbjct: 242 LDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGA 301
Query: 916 A-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1080
+ + P++ + F+P++Q + +++ +F NMSS FS++
Sbjct: 302 SGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSM 361
Query: 1081 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS--PSTPSLVT 1254
++STL P++HAAA LAASY P+ VDG+ +P + SA+G P+ S+V
Sbjct: 362 LVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPNMASIVA 418
Query: 1255 ATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAHQ 1434
AT+ QG++P P ++ F + M Q
Sbjct: 419 ATVAAASAWWATQGLLPLFPPPIAFPFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQ 478
Query: 1435 SEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------NQAK 1545
+ D S KGE S +EL N+ K
Sbjct: 479 ETRKQDNSEAMKVIVSSETDESGKGEVSLHTELKISPADKADTKPAAGAETSDVFGNKKK 538
Query: 1546 ANRLQCIVASENTIPDELETDE-----------------------DNKTKRFIGEARDRS 1656
+R C S ++E D DN +RF RS
Sbjct: 539 QDRSSC--GSNTPSSSDIEADNAPENQEKANDKAKQASCSNSSAGDNNHRRF------RS 590
Query: 1657 NGVMGQSWMPISEQNHTTFGA--SLERRPY------------------DSALHTGVAQTK 1776
+ SW +SE+ F A S ER P D V K
Sbjct: 591 SASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKEEEDEVTTVTVDLNK 650
Query: 1777 GGV---PTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETGNKR 1944
+ K+ ++ FKPYKRCSVEAKEN+ +E G KR
Sbjct: 651 NATIIDQELDTADEPRASFPNELSNLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKR 710
Query: 1945 ICLPEEA*T 1971
I L EA T
Sbjct: 711 IRLESEAST 719
>ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Oryza brachyantha]
gi|573953750|ref|XP_006659145.1| PREDICTED: protein
CCA1-like isoform X9 [Oryza brachyantha]
Length = 718
Score = 234 bits (597), Expect = 1e-58
Identities = 209/731 (28%), Positives = 306/731 (41%), Gaps = 110/731 (15%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLS-----PS 453
RSHAQKFFTKLEKEA++ G SPG HDIDI ++ + P+
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSSLSCETSIREVPN 121
Query: 454 GEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQ-HGLSASISNKGSTSP 630
+ + + + + DA EKL+ KE +E G+ S V+N+ + S S NKGS++
Sbjct: 122 DKATKSNLRSNSTSQMAGDAALEKLQRKEISEKGSCSEVINLFEIPSASFSSVNKGSSNH 181
Query: 631 VLMEFL-PTVRSLKENVAVDNP------VLPINTFNEATLVYQGNVLIQGSCMSSNNNIV 789
+ PT +K+ V ++ V N+ + + I S+ N +
Sbjct: 182 DASRGMEPTKTEIKDVVILERDSIHNGVVKNAKDINDQEMERLNEMHISSKSDHSHENCL 241
Query: 790 DVEGSISNYHVSSIKQAHS-----------------VGINRSKEKNEQTLTSSDQPGPAA 918
D S +S++ ++ GI + + +SDQ G A+
Sbjct: 242 DASKQQSKPKPNSVEATYADWSARRDSHYQMDRNGVTGIPATGTEGSHPDQTSDQMGGAS 301
Query: 919 -----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNLI 1083
+ P++ + F+P++Q + +++ +F+NMSS FS+++
Sbjct: 302 GTMNQCIHPTLPVDPKFDRSDTAQPFPHNYTAFAPIMQCHCDQDAYRSFVNMSSTFSSML 361
Query: 1084 ISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS--PSTPSLVTA 1257
+STL P++HAAA LAASY P+++ + +P + SA+G P+ S+V A
Sbjct: 362 VSTLLSNPAIHAAARLAASYWPAIDSNSP---DPNQENISESAQGSHAGSPPNMASIVAA 418
Query: 1258 TIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAV---------EM 1410
TI QG++P P ++ F +Q P + E+
Sbjct: 419 TIAAASAWWATQGLLPLFPPPIA--FPFVPAPSAPFPTADVQRAPEKDIDCPIDNAQKEL 476
Query: 1411 MQVPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL------------------- 1533
+ +SE +K +D S +GE +EL
Sbjct: 477 QETRKQDKSEAMK-------VIVSSESDESGQGEVLLHTELKISPADKDDTKTATGANTS 529
Query: 1534 ----NQAKANRLQCIVASENTIPDELETDE-----------------DNKTKRFIGEARD 1650
N+ K +R C S ++E D N + R
Sbjct: 530 EVFGNKKKQDRSSC--GSNTPSSSDIEADNAPEKQEKANDKAKQASCSNSSAGDTNHRRF 587
Query: 1651 RSNGVMGQSWMPISEQNHTTFGASLERRPYDSALHTGVAQ-----TKGGVPTKVXXXXXX 1815
RS+G SW +SE+ F A R + A+ TK
Sbjct: 588 RSSGSTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQAEGSKEVTKEDEDEVTTVTVDL 647
Query: 1816 XXXXXXFKHG------------------NFKASQSVFKPYKRCSVEAKENKT-TREETGN 1938
H K+ ++ FKPYKRCSVEAKEN+ +E G
Sbjct: 648 NKNVTIIDHELDTTDEPRASFPNELSNLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGT 707
Query: 1939 KRICLPEEA*T 1971
KRI L E T
Sbjct: 708 KRIRLESETST 718
>dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group]
Length = 725
Score = 232 bits (592), Expect = 4e-58
Identities = 222/738 (30%), Positives = 307/738 (41%), Gaps = 117/738 (15%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDI----XXXXXXXXXXXXXXXXTTTGSLSPSG 456
RSHAQKFFTKLEKEA++ G SPG HDIDI + T +
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 457 EEAAAGSKPPNPIC-LKNDANKE------KLKVKENTESGNSSVVLNIAQHGLSASIS-- 609
++A + N + DA E KL+ KE +E G+ S VLN+ + SAS S
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLTYIQKLQRKEISEKGSCSEVLNLFREVPSASFSSV 181
Query: 610 NKGSTSPVLMEFL-PTVRSLKENVAVDNPVL------PINTFNEATLVYQGNVLIQGSCM 768
NK S++ L PT +K+ V ++ + N+ + + I
Sbjct: 182 NKSSSNHGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPD 241
Query: 769 SSNNNIVDV--------EGSISNYHV--SSIKQAH-------SVGINRSKEKNEQTLTSS 897
S+ N +D S+ +V S+ K +H G + + +S
Sbjct: 242 HSHENCLDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTS 301
Query: 898 DQPGPAA-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1062
DQ G A+ + P++ + F+P++Q + +++ +F NMS
Sbjct: 302 DQMGGASGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMS 361
Query: 1063 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS--PS 1236
S FS++++STL P++HAAA LAASY P+ VDG+ +P + SA+G P+
Sbjct: 362 STFSSMLVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPN 418
Query: 1237 TPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQ 1416
S+VTAT+ QG++P P ++ F + M
Sbjct: 419 MASIVTATVAAASAWWATQGLLPLFPPPIAFPFVPAPSAPFSTADVQRAQEKDIDCPMDN 478
Query: 1417 VPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL--------------------- 1533
Q + D S KGE S +EL
Sbjct: 479 AQKELQETRKQDNFEAMKVIVSSETDESGKGEVSLHTELKISPADKADTKPAAGAETSDV 538
Query: 1534 --NQAKANRLQCIVASENTIPDELETDE-----------------------DNKTKRFIG 1638
N+ K +R C S ++E D DN +RF
Sbjct: 539 FGNKKKQDRSSC--GSNTPSSSDIEADNAPENQEKANDKAKQASCSNSSAGDNNHRRF-- 594
Query: 1639 EARDRSNGVMGQSWMPISEQNHTTFGA--SLERRPYDSA--------------------- 1749
RS+ SW +SE+ F A S ER P +
Sbjct: 595 ----RSSASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKEEEDEVTTV 650
Query: 1750 ---LHTGVAQTKGGVPTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT- 1917
L+ A + T K K+ ++ FKPYKRCSVEAKEN+
Sbjct: 651 TVDLNKNAAIIDQELDTADEPRASFPNELSNLK---LKSRRTGFKPYKRCSVEAKENRVP 707
Query: 1918 TREETGNKRICLPEEA*T 1971
+E G KRI L EA T
Sbjct: 708 ASDEVGTKRIRLESEAST 725
>ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Oryza brachyantha]
gi|573953736|ref|XP_006659138.1| PREDICTED: protein
CCA1-like isoform X2 [Oryza brachyantha]
gi|573953738|ref|XP_006659139.1| PREDICTED: protein
CCA1-like isoform X3 [Oryza brachyantha]
gi|573953740|ref|XP_006659140.1| PREDICTED: protein
CCA1-like isoform X4 [Oryza brachyantha]
gi|573953742|ref|XP_006659141.1| PREDICTED: protein
CCA1-like isoform X5 [Oryza brachyantha]
gi|573953744|ref|XP_006659142.1| PREDICTED: protein
CCA1-like isoform X6 [Oryza brachyantha]
gi|573953746|ref|XP_006659143.1| PREDICTED: protein
CCA1-like isoform X7 [Oryza brachyantha]
Length = 724
Score = 228 bits (582), Expect = 6e-57
Identities = 209/737 (28%), Positives = 305/737 (41%), Gaps = 116/737 (15%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTT-----------T 435
RSHAQKFFTKLEKEA++ G SPG HDIDI ++
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSSLSCETSIREVPN 121
Query: 436 GSLSPSGEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQ-HGLSASISN 612
+ S + + S+ L+ A +KL+ KE +E G+ S V+N+ + S S N
Sbjct: 122 DKATKSNLRSNSTSQMAGDAALEKLACIQKLQRKEISEKGSCSEVINLFEIPSASFSSVN 181
Query: 613 KGSTSPVLMEFL-PTVRSLKENVAVDNP------VLPINTFNEATLVYQGNVLIQGSCMS 771
KGS++ + PT +K+ V ++ V N+ + + I
Sbjct: 182 KGSSNHDASRGMEPTKTEIKDVVILERDSIHNGVVKNAKDINDQEMERLNEMHISSKSDH 241
Query: 772 SNNNIVDVEGSISNYHVSSIKQAHS-----------------VGINRSKEKNEQTLTSSD 900
S+ N +D S +S++ ++ GI + + +SD
Sbjct: 242 SHENCLDASKQQSKPKPNSVEATYADWSARRDSHYQMDRNGVTGIPATGTEGSHPDQTSD 301
Query: 901 QPGPAA-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSS 1065
Q G A+ + P++ + F+P++Q + +++ +F+NMSS
Sbjct: 302 QMGGASGTMNQCIHPTLPVDPKFDRSDTAQPFPHNYTAFAPIMQCHCDQDAYRSFVNMSS 361
Query: 1066 AFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS--PST 1239
FS++++STL P++HAAA LAASY P+++ + +P + SA+G P+
Sbjct: 362 TFSSMLVSTLLSNPAIHAAARLAASYWPAIDSNSP---DPNQENISESAQGSHAGSPPNM 418
Query: 1240 PSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAV----- 1404
S+V ATI QG++P P ++ F +Q P +
Sbjct: 419 ASIVAATIAAASAWWATQGLLPLFPPPIA--FPFVPAPSAPFPTADVQRAPEKDIDCPID 476
Query: 1405 ----EMMQVPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL------------- 1533
E+ + +SE +K +D S +GE +EL
Sbjct: 477 NAQKELQETRKQDKSEAMK-------VIVSSESDESGQGEVLLHTELKISPADKDDTKTA 529
Query: 1534 ----------NQAKANRLQCIVASENTIPDELETDE-----------------DNKTKRF 1632
N+ K +R C S ++E D N +
Sbjct: 530 TGANTSEVFGNKKKQDRSSC--GSNTPSSSDIEADNAPEKQEKANDKAKQASCSNSSAGD 587
Query: 1633 IGEARDRSNGVMGQSWMPISEQNHTTFGASLERRPYDSALHTGVAQ-----TKGGVPTKV 1797
R RS+G SW +SE+ F A R + A+ TK
Sbjct: 588 TNHRRFRSSGSTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQAEGSKEVTKEDEDEVT 647
Query: 1798 XXXXXXXXXXXXFKHG------------------NFKASQSVFKPYKRCSVEAKENKT-T 1920
H K+ ++ FKPYKRCSVEAKEN+
Sbjct: 648 TVTVDLNKNVTIIDHELDTTDEPRASFPNELSNLKLKSRRTGFKPYKRCSVEAKENRVPA 707
Query: 1921 REETGNKRICLPEEA*T 1971
+E G KRI L E T
Sbjct: 708 SDEVGTKRIRLESETST 724
>gb|AAR20887.1| circadian oscillator component [Oryza sativa Japonica Group]
Length = 603
Score = 219 bits (558), Expect = 4e-54
Identities = 160/447 (35%), Positives = 227/447 (50%), Gaps = 38/447 (8%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRI++H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIKEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDI----XXXXXXXXXXXXXXXXTTTGSLSPSG 456
RSHAQKFFTKLEKEA++ G SPG HDIDI + T +
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 457 EEAAAGSKPPNPIC-LKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS 627
++A + N + DA EKL+ KE +E G+ S VLN+ + SAS S NK S++
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSN 181
Query: 628 PVLMEFL-PTVRSLKENVAVDNPVL------PINTFNEATLVYQGNVLIQGSCMSSNNNI 786
L PT +K+ V ++ + N+ + + I S+ N
Sbjct: 182 HGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENC 241
Query: 787 VDV--------EGSISNYHV--SSIKQAH-------SVGINRSKEKNEQTLTSSDQPGPA 915
+D S+ +V S+ K +H G + + +SDQ G A
Sbjct: 242 LDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGA 301
Query: 916 A-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1080
+ + P++ + F+P++Q + +++ +F NMSS FS++
Sbjct: 302 SGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSM 361
Query: 1081 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPS--PSTPSLVT 1254
++STL P++HAAA LAASY P+ VDG+ +P + SA+G P+ S+VT
Sbjct: 362 LVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPNMASIVT 418
Query: 1255 ATIXXXXXXXXXQGIMPWCTPHLSHVF 1335
AT+ QG++P P ++ F
Sbjct: 419 ATVAAASAWWATQGLLPLFPPPIAFPF 445
>gb|ADW09013.1| LHY [Triticum aestivum]
Length = 648
Score = 214 bits (545), Expect = 1e-52
Identities = 153/451 (33%), Positives = 220/451 (48%), Gaps = 42/451 (9%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTRE--- 118
Query: 469 AGSKPPNPICLKNDANK------------EKLKVKENTESGNSSVVLNIAQHGLSASISN 612
P + + L N + +KL+ KE +E+G+ S V+NI + SAS S+
Sbjct: 119 ---VPKSSVSLSNSNAEMGSNGTLQLTCIQKLQRKELSENGSCSEVINIFREAPSASFSS 175
Query: 613 KGSTSP---VLMEFLPTVRSLKENVAVDNPVLPINT------FNEATLVYQGNVLIQGSC 765
+S V PT K+ ++ I+ N+ + V I +
Sbjct: 176 SNKSSSNHGVSGGIEPTKTENKDIATMERKSTSIDVGKDVKDINDQEMERNNRVHISSNY 235
Query: 766 MSSNNNIVD------------VEGSISNYHVSS--IKQAHSVGINRSKE---KNEQTLTS 894
S+ + +D E + + H +S + Q + G + + + +
Sbjct: 236 DRSHEDCLDNSMKHMQLKPNTAETTYTGQHAASAPLYQMNKTGATGAPDPGTEGSHPDQT 295
Query: 895 SDQPGPA----AAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1062
SD+ G A + P++ + F+P +Q + +++ + LNMS
Sbjct: 296 SDRVGGANGSMDCIHPTLPVDPKIGSSSTAQSFPHNYAGFAPTMQCHCNQDAYRSSLNMS 355
Query: 1063 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTP 1242
S FSN+++STL P+VHAAA LAASY P+ + + + N E+ R + PS
Sbjct: 356 STFSNMLVSTLLSNPTVHAAARLAASYWPAADSNIPVGPNQEVFAENAQGRHIGSPPSMA 415
Query: 1243 SLVTATIXXXXXXXXXQGIMPWCTPHLSHVF 1335
S+V AT+ QG++P P ++ F
Sbjct: 416 SVVAATVAAASAWWATQGLLPLFAPPMAFPF 446
>dbj|BAJ92173.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285653|gb|AEW48244.1| circadian clock associated 1
[Hordeum vulgare subsp. vulgare]
gi|364285657|gb|AEW48246.1| circadian clock associated 1
[Hordeum vulgare subsp. vulgare]
gi|397911976|gb|AFO69281.1| circadian clock associated 1
[Hordeum vulgare]
Length = 717
Score = 213 bits (541), Expect = 4e-52
Identities = 152/451 (33%), Positives = 220/451 (48%), Gaps = 42/451 (9%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTRE--- 118
Query: 469 AGSKPPNPICLKND------------ANKEKLKVKENTESGNSSVVLNIAQHGLSASISN 612
P + + L N + +KL+ KE + +G+ S V+NI + SAS S+
Sbjct: 119 ---VPKSSVSLSNSNSQMESNGTLQVTSTQKLQRKELSGNGSCSEVINIFREAPSASFSS 175
Query: 613 KGSTSP---VLMEFLPTVRSLKENVAVDNPVLPINT------FNEATLVYQGNVLIQGSC 765
+S V PT +K+ A++ ++ N+ + V I
Sbjct: 176 SNKSSSNHGVSGGIEPTKTEIKDMAAMERKSTSVDVAKDVKDINDQEMERNNRVHISSKY 235
Query: 766 MSSNNNIVD------------VEGSISNYHVSS--IKQAHSVGINRSKE---KNEQTLTS 894
S+ + +D VE + + HV+S + Q + G + + + +
Sbjct: 236 DRSHEDCLDSSMKHMQLKPNTVETTYTGQHVASAPLYQMNKTGATGTPDPGTEGSHPDQT 295
Query: 895 SDQPGPA----AAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1062
+DQ G A + P++ + F+P +Q +++ + ++MS
Sbjct: 296 NDQVGGANGSMDCIHPTLPVDLKFGSSSTAQPFPHNYSGFAPTMQCQCNQDAYRSSVDMS 355
Query: 1063 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTP 1242
S FSN+++STL P+VHAAA LAASY P+ + + + N I R + PS
Sbjct: 356 STFSNMLVSTLLSNPTVHAAARLAASYWPAADSNIPVDPNQGIFAQNAQGRHIVSPPSMA 415
Query: 1243 SLVTATIXXXXXXXXXQGIMPWCTPHLSHVF 1335
S+V AT+ QG++P P ++ F
Sbjct: 416 SVVAATVAAASAWWATQGLLPLFAPPMAFPF 446
>ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium distachyon]
Length = 716
Score = 212 bits (540), Expect = 5e-52
Identities = 154/445 (34%), Positives = 215/445 (48%), Gaps = 36/445 (8%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EMNSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGEAHDIDIPPPRPKRKPNCPYPRKGCLSSDAPTREAPN 121
Query: 469 AGSKPPNPICLKND---ANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS-P 630
S N ++ A L+ + ES + S VLN+ + SAS S NK S++
Sbjct: 122 DKSTKSNISLTSSNAQTAGNATLQKLQGKESSSCSEVLNLFRDAQSASFSSVNKSSSNHG 181
Query: 631 VLMEFLPTVRSLKENVAVDNPVLPIN------TFNEATLVYQGNVLIQG-------SCMS 771
ME T +K+ +D + I+ N+ + + I C+
Sbjct: 182 ASMEIEATKTEIKDMTTMDRTSVSIDMEKDVKDINDQEMERPNRIHISAKYDHLHDDCLD 241
Query: 772 SNNNIVDVEGS-------------ISNYHVSSIKQAHSVGINRSKEKNEQTLTSSDQPGP 912
++ V ++ S+Y + + I K +QT +DQ G
Sbjct: 242 NSRQHVKLKPKSVEITHTDQHPTRASHYQMDRTGASGIPVIGTEKSPADQT---NDQVGV 298
Query: 913 AA----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1080
A + P++ + F+P++Q + +++ + +NMSSAFS++
Sbjct: 299 AKGNMNCLHPTLSVDPKFDNSSTAQPITHNYAAFAPMMQCHCNQDAYKSSVNMSSAFSSM 358
Query: 1081 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTPSLVTAT 1260
++STL P+VHAAA LAASY PS D + N E R + PS S+V AT
Sbjct: 359 LVSTLLSNPAVHAAARLAASYWPS--ADSPVDPNQESPSDNAQGRHIGSPPSMASIVAAT 416
Query: 1261 IXXXXXXXXXQGIMPWCTPHLSHVF 1335
+ QG++P P ++ F
Sbjct: 417 VAAASAWWATQGLLPLFAPPMAFPF 441
>gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare subsp. vulgare]
Length = 717
Score = 211 bits (537), Expect = 1e-51
Identities = 151/451 (33%), Positives = 219/451 (48%), Gaps = 42/451 (9%)
Frame = +1
Query: 109 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 288
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 289 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 468
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTRE--- 118
Query: 469 AGSKPPNPICLKND------------ANKEKLKVKENTESGNSSVVLNIAQHGLSASISN 612
P + + L N + +KL+ KE + +G+ S V+NI + SAS S+
Sbjct: 119 ---VPKSSVSLSNSNSQMESNGTLQVTSTQKLQRKELSGNGSCSEVINIFREAPSASFSS 175
Query: 613 KGSTSP---VLMEFLPTVRSLKENVAVDNPVLPINT------FNEATLVYQGNVLIQGSC 765
+S V PT +K+ A++ ++ N+ + V I
Sbjct: 176 SNKSSSNHGVSGGIEPTKTEIKDMAAMERKSTSVDVAKDVKDINDQEMERNNRVHISSKY 235
Query: 766 MSSNNNIVD------------VEGSISNYHVSS--IKQAHSVGINRSKE---KNEQTLTS 894
S+ + +D VE + + HV+ + Q + G + + + +
Sbjct: 236 DRSHEDCLDSSMKHMQLKPNTVETTYTGQHVAGAPLYQMNKTGATGTPDPGTEGSHPDQT 295
Query: 895 SDQPGPA----AAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1062
+DQ G A + P++ + F+P +Q +++ + ++MS
Sbjct: 296 NDQVGGANGSMDCIHPTLPVDLKFGSSSTAQPFPHNYSGFAPTMQCQCNQDAYRSSVDMS 355
Query: 1063 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTP 1242
S FSN+++STL P+VHAAA LAASY P+ + + + N I R + PS
Sbjct: 356 STFSNMLVSTLLSNPTVHAAARLAASYWPAADSNIPVDPNQGIFAQNAQGRHIVSPPSMA 415
Query: 1243 SLVTATIXXXXXXXXXQGIMPWCTPHLSHVF 1335
S+V AT+ QG++P P ++ F
Sbjct: 416 SVVAATVAAASAWWATQGLLPLFAPPMAFPF 446
>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
Length = 768
Score = 204 bits (520), Expect = 1e-49
Identities = 223/792 (28%), Positives = 309/792 (39%), Gaps = 176/792 (22%)
Frame = +1
Query: 118 SPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQIRSH 297
S EELV+K RKPYTITKQRE+WTE+EHN FLEALKLYGRAWQRIE+HIGTKTAVQIRSH
Sbjct: 5 SSGEELVIKARKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSH 64
Query: 298 AQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTG------------- 438
AQKFF+KLEKEAL KG G DIDI T+ G
Sbjct: 65 AQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGVPTSQVGTKDGKL 124
Query: 439 ---SLSPSGEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQ--HGLSAS 603
+ S ++A K P P D E K + + N S V + Q H S S
Sbjct: 125 FTSASSSDCKQALDLEKEPLPEKPNGDEKPENAK---DNQDDNCSEVFTLHQEVHCSSVS 181
Query: 604 ISNKGST-SPV-------LMEFLPTV-RSLKE---------------------------- 672
+N+ S +PV L EF+P++ RS+ +
Sbjct: 182 SANRSSVPTPVALRNLNTLREFVPSMKRSITQDETNESYVTIELKGNQKLEKADAKQTIQ 241
Query: 673 -------------NVAVDNPV-----------LPINTFNEATLVYQGNVLIQ------GS 762
NV + P+ LP++ +AT Y +V +Q G+
Sbjct: 242 DTGTSNGSKLGNHNVLHEKPIQGDKTQDLNCALPMDEM-QATQNYPRHVPVQVVDGSLGT 300
Query: 763 CMSSNNNIVDVEGSISNYHVSSIKQAHSVGINRSKEKNEQTLTSSDQPGPAAAVSPSMGL 942
C + ++ + + SI + + + + H+ N + + T+ Q +V+ S
Sbjct: 301 CTQTPSSDMSFQDSIF-HPMGEVHRHHNPFTNPAA-----SATTEHQNNVPRSVNQSFPA 354
Query: 943 KHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNLIISTLQQIPSVHAA 1122
H P F+P+ + ++ +FL+MSS FS+LI+STL Q P+ HAA
Sbjct: 355 FHPP---------------FTPI---RHNQDDYQSFLHMSSTFSSLIVSTLMQNPAAHAA 396
Query: 1123 ASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKPSPSTPSLVTATIXXXXXXXXXQGIM 1302
AS AA+ P V+ QG P R M +PS ++ AT+ G++
Sbjct: 397 ASFAATVWPYANVEASADSPASTQGVFP-PRQMGSTPSMAAIAAATVAAATAWWAAHGLV 455
Query: 1303 PWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVE----MMQVPVAHQ-----SEILKXX 1455
P C P L F P E +Q P Q SE ++
Sbjct: 456 PLCAP-LPTAFTCNPASTAAVPPTDSGQAPAAKTEGEVNTLQTPPLQQLDPEYSEAVQAQ 514
Query: 1456 XXXXXXXXXXXNDASAKG-------------EN----SEFSELNQAK----ANRLQC--- 1563
+D+ G EN +E + N+ K +R C
Sbjct: 515 HSDSKLPIPSSSDSEESGGAKLNSGPKATDHENAVTATELHDSNKTKGRKQVDRSSCGSN 574
Query: 1564 IVASENTIPDELETDEDNK---------------TKRFIGEARDRSNGVMGQSWMPISEQ 1698
+S + D LE E K + R + RS M SW +SE+
Sbjct: 575 TASSSDRETDALEKQEMGKEEPKEPDANHSAADTSNRRCCSSSSRSFSYMNDSWKSVSEE 634
Query: 1699 NHTTFGASLERR--------PYD------------------------------SALHTGV 1764
F A R P+D ++ +G
Sbjct: 635 GRLAFQALFSREVLPQSFSPPHDLKNMGNQKDNTTDDKQNANENDGNASLLDLNSQKSGS 694
Query: 1765 AQTKGGVPTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKTTR-----EE 1929
+ G+ +G KA ++ FKPYKRCSVEAKEN+ EE
Sbjct: 695 CSVQQGILNFEPNNNGEGLLTIGLAYGKLKARRTGFKPYKRCSVEAKENRVANASGQGEE 754
Query: 1930 TGNKRICLPEEA 1965
G KRI L EA
Sbjct: 755 KGPKRIRLEGEA 766
>ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cicer arietinum]
gi|502114154|ref|XP_004494879.1| PREDICTED: protein
LHY-like isoform X2 [Cicer arietinum]
gi|502114158|ref|XP_004494880.1| PREDICTED: protein
LHY-like isoform X3 [Cicer arietinum]
Length = 756
Score = 199 bits (507), Expect = 3e-48
Identities = 159/460 (34%), Positives = 206/460 (44%), Gaps = 55/460 (11%)
Frame = +1
Query: 103 MEEQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAV 282
M E S EE+VVK RKPYTITKQRE+WTE+EHN FLEALKLYGRAWQRIE+HIGTKTAV
Sbjct: 1 MMEAYSSGEEVVVKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAV 60
Query: 283 QIRSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEE 462
QIRSHAQKFF+KLEKEAL KGA+ G +IDI T G +P+
Sbjct: 61 QIRSHAQKFFSKLEKEALVKGAAIGQSLNIDIPPPRPKRKPSNPYPRKTNVG--APTLHS 118
Query: 463 AAAGSKPPNPICLKN-----DANKEKL-----------KVKENTESGNSSVVLNIAQHG- 591
A KP + D KE L VKEN + N S V I Q
Sbjct: 119 GAKYGKPLTAFASLHGKEAMDFEKESLPEMHTDDERPTTVKENNDE-NCSKVCTILQEAP 177
Query: 592 -LSASISNKGSTSP--------VLMEFLPTVRSLKENVAVDNPVLPINTFNEATLVYQGN 744
LS S +NK S S EF+P V+ + + T N+ + G
Sbjct: 178 CLSVSSANKSSISMSVPQTKSFTFREFIPLVKEVIPQDKTNESFPATETENQMLEIGDGK 237
Query: 745 VL--IQGSCMSSNNNIVDVEGSISNYHVSSIKQAHSVGINRSKEKNEQTL---------- 888
G+C +S S+ + A +V + + + +
Sbjct: 238 QTQKTDGTCKTSKLENTCSPKSVQTEKTDGLTYASTVDEMQGNQNYPRHITVHVVDGNLG 297
Query: 889 TSSDQPGPAAAVSPSM-----GLKHSP-----------XXXXXXXXXXXXXXXFSPVVQY 1020
TS+ P + S+ G+ P F P +
Sbjct: 298 TSTQTPSQDMLIQDSIFQPIGGINGQPNLFTNSAASNTSESQNNTARSSIHQSFPPCPLF 357
Query: 1021 -NNQRESCDAFLNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQG 1197
+ + +FLNM S FS+LI+STL Q P+ HAAAS AA++ P VD + QG
Sbjct: 358 AQHNEDDYQSFLNMPSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVDTSANSHACSQG 417
Query: 1198 GEPSARGMKPSPSTPSLVTATIXXXXXXXXXQGIMPWCTP 1317
G PS R + PS ++ AT+ G++P CTP
Sbjct: 418 GFPS-RQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCTP 456
>ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circadian clock
associated-1-like protein 1 isoform X1 [Glycine max]
gi|571523805|ref|XP_006598674.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X2 [Glycine max]
gi|571523809|ref|XP_006598675.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X3 [Glycine max]
gi|571523813|ref|XP_006598676.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X4 [Glycine max]
gi|571523816|ref|XP_006598677.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X5 [Glycine max]
gi|571523820|ref|XP_006598678.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X6 [Glycine max]
Length = 750
Score = 199 bits (505), Expect = 5e-48
Identities = 217/755 (28%), Positives = 292/755 (38%), Gaps = 137/755 (18%)
Frame = +1
Query: 118 SPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQIRSH 297
S EE+VVK RKPYTITKQRE+WTEEEHN FLEALKL+GRAWQRIE+HIGTKTAVQIRSH
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSH 64
Query: 298 AQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLS---------- 447
AQKFFTKLEKEAL KG G DIDI T G+ S
Sbjct: 65 AQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTRIGTTSLHSGAKDGKL 124
Query: 448 ---PSGEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASISNKG 618
S A P+ K+D ++ VKEN + N + V + Q +S+S+
Sbjct: 125 NLVESSHVNQALDLKKEPLPEKHDLDEGLTTVKENKDE-NHAKVFTLLQEVPCSSVSSAN 183
Query: 619 STSPVL-------MEFLPTVRSLKENVAVDN------PVLPINTFNEATLVYQGNVLIQG 759
+S + F S+KE +A D V P N E Q N +
Sbjct: 184 ESSITMSVPLGNPCAFKEITPSVKEVIARDEKTESFVTVEPENGKLEINDGKQTNGTSKD 243
Query: 760 SCMSSNNNI------------VDVEGSI------SNY--HVSSIKQAHSVGINRSKEKNE 879
S + ++ + +D E +I NY HV+ ++G N +
Sbjct: 244 SRLEDSDALHMKLVQNEKPDGLDCELTIDGMQGNQNYPRHVTVHVVDGNLGTNTQNPSQD 303
Query: 880 QTLTSS-DQPGPAAAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQY----NNQRESCD 1044
S QP ++ +P + Y + ++
Sbjct: 304 MLFRDSMFQPIGGVNGQRNVFTNTAPSNTSESQNNTARSSVHQSFLPYPPFTQHNQDDYQ 363
Query: 1045 AFLNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEP------ 1206
+FL+MSS FSNLI+STL Q P+ HAAAS AA++ P Y NPE P
Sbjct: 364 SFLHMSSTFSNLIVSTLMQNPAAHAAASFAATFWP--------YANPETSANSPRCSQGG 415
Query: 1207 -SARGMKPSPSTPSLVTATIXXXXXXXXXQGIMPWCTP-HLSHVFXXXXXXXXXXXXXXM 1380
+ R + PS ++ AT+ G++P C P H S
Sbjct: 416 FTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTSFACPASVTTVPSMNTGEA 475
Query: 1381 QVL-----------PPLAVEMM--QVPVAHQSEILKXXXXXXXXXXXXXNDASAKGEN-- 1515
L PPL +M+ + A Q++ DA +
Sbjct: 476 PALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPAAILSDSESGDAKLNTSSKV 535
Query: 1516 ---------SEFSELNQAK----ANRLQC---IVASENTIPDELETDEDNKTKRFIGEA- 1644
SE + N+ K +R C +S + D LE E K + I +A
Sbjct: 536 TDHETNKTISEHLDSNKTKGRKPVDRSSCGSNTASSSDVETDALEKGEKGKEEPEIPDAN 595
Query: 1645 --------RDRSNGVMGQSWMPISEQNHTTFGASLERR-------PYDSALHT-----GV 1764
R RS + SW +SE+ F A R P + +T
Sbjct: 596 QLAIEFSNRRRSVSNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHALKNTDHQMDNA 655
Query: 1765 AQTKGGVPTKVXXXXXXXXXXXXFK---------------------HGNFKASQSVFKPY 1881
K + K ++ G K ++ FKPY
Sbjct: 656 NDNKQNIDDKDEDLDGSKKCSSNYEAMQKNLLFVENNEGLLTIGLGQGKLKTHRTGFKPY 715
Query: 1882 KRCSVEAKENK-----TTREETGNKRICLPEEA*T 1971
KRCS+EAKEN+ EE G KRI L E T
Sbjct: 716 KRCSMEAKENRVGASSNQGEEQGCKRIRLEGETST 750
>gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [Theobroma cacao]
gi|508703664|gb|EOX95560.1| Homeodomain-like superfamily
protein isoform 5 [Theobroma cacao]
gi|508703665|gb|EOX95561.1| Homeodomain-like superfamily
protein isoform 5 [Theobroma cacao]
Length = 707
Score = 198 bits (504), Expect = 7e-48
Identities = 141/410 (34%), Positives = 191/410 (46%), Gaps = 10/410 (2%)
Frame = +1
Query: 118 SPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQIRSH 297
S EELV+K RKPYTITKQRE+WTEEEHN FLEALKLYGRAWQRIE+HIGTKTAVQIRSH
Sbjct: 5 SSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSH 64
Query: 298 AQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAAAGS 477
AQKFF+KLEKEAL+KG G DI+I T + + G +
Sbjct: 65 AQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTAQVGAKDGKSE 124
Query: 478 KPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASI------SNKGSTSPVLM 639
P + + K + EK + E + L Q + + +N S S V
Sbjct: 125 TPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQDDSCSEVVTLLHEANCSSVSSVNK 184
Query: 640 EFLPTVRSLKENVAVDNPVLPINTFNEATLVYQGNVLIQGSCMSSNNNIVDVEGSISNYH 819
+PT +L+ + TF E + + G+ +SN ++ S +++
Sbjct: 185 NSIPTSAALRNSC----------TFREFVPSLKETIQDNGTSKASN-----LDNSCTSHE 229
Query: 820 VSSIKQAHSVGINRSKEKNEQTLTSSDQPGPAAAVSPSMGLKHSPXXXXXXXXXXXXXXX 999
++ Q + Q + + + S+G S
Sbjct: 230 KAAQGQKKDDVDGGLRADETQATQNYPRHVAVHVLDGSLGTAASATTEHQNNAPRSTHQA 289
Query: 1000 F----SPVVQYNNQRESCDAFLNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDG 1167
F P E +FL++SS FS+LI STL Q P+ HAAAS AA++ P VD
Sbjct: 290 FPTFHPPFTHVCPNPEDYRSFLHVSSTFSSLIASTLLQNPAAHAAASFAATFWPYANVDS 349
Query: 1168 HLYLNPEIQGGEPSARGMKPSPSTPSLVTATIXXXXXXXXXQGIMPWCTP 1317
QGG PS R M P+PS ++ AT+ G++P C P
Sbjct: 350 SADSPACSQGGFPS-RQMNPAPSMAAIAAATVAAATAWWAAHGLLPLCAP 398