BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00007010
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg...    57   3e-06
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...    56   4e-06
ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding pro...    55   7e-06
ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro...    55   7e-06

>ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding
           protein subunit beta, chloroplastic-like [Cucumis
           sativus]
          Length = 608

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/81 (44%), Positives = 44/81 (54%)
 Frame = -2

Query: 245 MASTFYAMSTFGAIASPGNFGADKKLTSRQKXXXXXXXXXXXXXXXXXXXXXXXXRDNFK 66
           MASTF AMS+ G +A+PG+   DKKL S                           R + K
Sbjct: 1   MASTFTAMSSIGTLAAPGSRAMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSS-K 59

Query: 65  INAMAKELYFNKDGSTIKKLQ 3
           I+AMAKEL+FN+DGS IKKLQ
Sbjct: 60  ISAMAKELHFNQDGSAIKKLQ 80


>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297746501|emb|CBI16557.3| unnamed protein product
           [Vitis vinifera]
          Length = 608

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/81 (43%), Positives = 42/81 (51%)
 Frame = -2

Query: 245 MASTFYAMSTFGAIASPGNFGADKKLTSRQKXXXXXXXXXXXXXXXXXXXXXXXXRDNFK 66
           MAS F  MS+ G++A+PG  G DKKL +                           R   +
Sbjct: 1   MASAFTTMSSVGSLAAPGGRGMDKKLATSSDRLSSFASISSSSFGRRQNVVLRRTRSP-R 59

Query: 65  INAMAKELYFNKDGSTIKKLQ 3
           INAMAK+LYFNKDGS IKKLQ
Sbjct: 60  INAMAKDLYFNKDGSAIKKLQ 80


>ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 601

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/81 (41%), Positives = 44/81 (54%)
 Frame = -2

Query: 245 MASTFYAMSTFGAIASPGNFGADKKLTSRQKXXXXXXXXXXXXXXXXXXXXXXXXRDNFK 66
           MASTF AM++ G++A+P    ADKKL+SR                              +
Sbjct: 1   MASTFAAMTSVGSLAAPSGRVADKKLSSRASIASFSFSKRPNVALRRTRSP--------R 52

Query: 65  INAMAKELYFNKDGSTIKKLQ 3
           ++AMAKEL+FNKDGS IKKLQ
Sbjct: 53  VSAMAKELHFNKDGSAIKKLQ 73


>ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/81 (44%), Positives = 44/81 (54%)
 Frame = -2

Query: 245 MASTFYAMSTFGAIASPGNFGADKKLTSRQKXXXXXXXXXXXXXXXXXXXXXXXXRDNFK 66
           MASTF AMS+ G +A+PG+   DKKL S                           R + K
Sbjct: 1   MASTFTAMSSIGTLAAPGSRVMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSS-K 59

Query: 65  INAMAKELYFNKDGSTIKKLQ 3
           I+AMAKEL+FN+DGS IKKLQ
Sbjct: 60  ISAMAKELHFNQDGSAIKKLQ 80