BLASTX nr result
ID: Zingiber25_contig00007003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00007003
(4208 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004982168.1| PREDICTED: heterogeneous nuclear ribonucleop... 167 3e-38
ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827... 167 3e-38
gb|EMJ19995.1| hypothetical protein PRUPE_ppa009799mg [Prunus pe... 167 4e-38
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop... 166 8e-38
ref|XP_004982169.1| PREDICTED: heterogeneous nuclear ribonucleop... 164 3e-37
emb|CBI31404.3| unnamed protein product [Vitis vinifera] 164 3e-37
ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea ma... 164 4e-37
ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group] g... 163 7e-37
tpg|DAA50686.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea m... 160 5e-36
gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays] 160 5e-36
ref|XP_002315330.1| glycine-rich RNA-binding family protein [Pop... 160 6e-36
ref|XP_004307343.1| PREDICTED: uncharacterized protein LOC101306... 158 2e-35
ref|NP_001130195.1| uncharacterized protein LOC100191289 [Zea ma... 158 2e-35
ref|XP_004955701.1| PREDICTED: glycine-rich RNA-binding protein ... 157 3e-35
ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Popu... 157 4e-35
gb|EMT10048.1| Glycine-rich RNA-binding protein 2 [Aegilops taus... 157 4e-35
ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823... 156 6e-35
gb|EOY18828.1| RNA-binding family protein with retrovirus zinc f... 156 8e-35
gb|EMT02366.1| Glycine-rich RNA-binding protein 2 [Aegilops taus... 156 8e-35
gb|EMS46305.1| Glycine-rich RNA-binding protein 2 [Triticum urartu] 156 8e-35
>ref|XP_004982168.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog 1-like
isoform X1 [Setaria italica]
Length = 314
Score = 167 bits (424), Expect = 3e-38
Identities = 115/301 (38%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ER T R RGFGFVTF RA ++AI +MH ELDGR ISVNKAEPKM+TD +RYD
Sbjct: 37 QIMLERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQELDGRTISVNKAEPKMNTDDTRYD- 95
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKF---- 680
CF+CGR GHW R+CP+A GG FSS KF
Sbjct: 96 -----SGGGRAEYRGGRSDGPPPGNCFECGRPGHWVRDCPNAAGGRSGRFSS--KFSGGS 148
Query: 679 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQ 500
D+Y NDRY GD F
Sbjct: 149 GGGRGDRFSGSDRFGDRYMDDRYDGGRYGYRDQVDTRDRYAGGRDRYANDRYPSGGDHFG 208
Query: 499 GDRYRGGPDHYPHSGYNREK---------------------------SYERDVPRGGSYD 401
DRY GGPD Y SGY RE+ SY+RD PRGG YD
Sbjct: 209 ADRYGGGPDRYAPSGYGRERERSYERDGVRGGGGGGGYDRSGPRGGGSYDRDGPRGGGYD 268
Query: 400 RDPAXXXXXXXXXXXXXXXXXXXXXXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYDVR 221
RD PARY+ GGS+R+R GPYDRP RGG +D R
Sbjct: 269 RD------------GPRGGVTDRYGGGGPARYD-GGSYRERPGPYDRPSRGG--GRFDDR 313
Query: 220 Y 218
Y
Sbjct: 314 Y 314
>ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 167 bits (424), Expect = 3e-38
Identities = 111/277 (40%), Positives = 126/277 (45%), Gaps = 15/277 (5%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ER T R RGFGFVTFS RA E+AIS+MH ELDGR ISVN+AEPKM+TD +RY
Sbjct: 37 QIMLERHTNRHRGFGFVTFSDPRAVESAISEMHTKELDGRTISVNRAEPKMNTDDTRYS- 95
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKFXXXX 668
C++CGR+GHWAR+CP+ GG SS
Sbjct: 96 -SGGDRGADRGDYRGGKGDGPPPGNCYQCGRAGHWARDCPNPAGGRSGQLSSKFSGGGGR 154
Query: 667 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGDRY 488
D+Y +DRY GD F DRY
Sbjct: 155 GDRFSGSDRFSDRYMDDRYDGGRYGYRDPIDNRDRYDGGRDRYASDRYPSGGDRFGADRY 214
Query: 487 RGGPDHYPHSGY--NREKSYERDVPRGG------------SYDRD-PAXXXXXXXXXXXX 353
GGPD Y SGY RE+SYERD RGG SYDRD P
Sbjct: 215 -GGPDRYQPSGYGRERERSYERDAVRGGAAFDRSGPRGGASYDRDGPRGGIGGGYDRDGP 273
Query: 352 XXXXXXXXXXXXPARYNGGGSFRQRHGPYDRPGRGGR 242
PARY+ GGS+R R GPYDRP RGGR
Sbjct: 274 RGGGADNYVSGGPARYD-GGSYRDRPGPYDRPSRGGR 309
>gb|EMJ19995.1| hypothetical protein PRUPE_ppa009799mg [Prunus persica]
Length = 277
Score = 167 bits (423), Expect = 4e-38
Identities = 109/268 (40%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ERDT RPRGFGF+TF RA E AI +MH EL R+ISVNKA+PKM D
Sbjct: 37 QIMMERDTNRPRGFGFITFGDRRAMEDAIREMHGRELGDRIISVNKAQPKMGGGGEDLDH 96
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGG-SDSHFSSHAKFXXX 671
DECFKCGR GHWAR+CPSAGGG FSSH++F
Sbjct: 97 GYRGGYSTGGRRNYGGGDRPVGQDECFKCGRPGHWARDCPSAGGGRGGGSFSSHSRF--G 154
Query: 670 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGDR 491
D+Y++DRY P GD F DR
Sbjct: 155 AGGRGDRFGGDRDRYVDDRYDGGRYGERDRFDSREDKYGSRDRYVSDRY-PAGDRFASDR 213
Query: 490 YRGGPDHYPHSGYNREKSYERDVPRGGSYDRDPAXXXXXXXXXXXXXXXXXXXXXXXXPA 311
Y GG D YP +GY +++ Y+RD RGGS DR PA
Sbjct: 214 Y-GGSDRYPQNGYGKDRGYDRDA-RGGS-DR----------------------YGSGGPA 248
Query: 310 RYNGGGSFRQRHGPYDRPGRGGRTSSYD 227
R + GG++R R GPYDRP RGGR SS+D
Sbjct: 249 R-DEGGNYRSRAGPYDRPSRGGRPSSFD 275
>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis vinifera]
Length = 278
Score = 166 bits (420), Expect = 8e-38
Identities = 103/271 (38%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ERDTGRPRGFGF+T++ R E AI +MH + R+ISVNKA+PKM D D
Sbjct: 37 QIMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMGED---PDH 93
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGG---SDSHFSSHAKFX 677
D+CFKCGR GHWAR+CPS+GGG + F S ++F
Sbjct: 94 GYNGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRF- 152
Query: 676 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQG 497
D+Y+NDRY P GD F G
Sbjct: 153 --SGGRGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSG 210
Query: 496 DRYRGGPDHYPHSGYNREKSYERD-VPRGGSYDRDPAXXXXXXXXXXXXXXXXXXXXXXX 320
DRY GG D YP +GY +++ Y+RD PRGG DR
Sbjct: 211 DRY-GGSDRYPQNGYGKDRGYDRDAAPRGGG-DR-----------------------YAG 245
Query: 319 XPARYNGGGSFRQRHGPYDRPGRGGRTSSYD 227
+ N G S+R R GPYDRP RGGR SS+D
Sbjct: 246 GGSARNEGRSYRNRPGPYDRPNRGGRPSSFD 276
>ref|XP_004982169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog 1-like
isoform X2 [Setaria italica]
Length = 276
Score = 164 bits (415), Expect = 3e-37
Identities = 113/299 (37%), Positives = 128/299 (42%), Gaps = 31/299 (10%)
Frame = -2
Query: 1021 MKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDXXX 842
M ER T R RGFGFVTF RA ++AI +MH ELDGR ISVNKAEPKM+TD +RYD
Sbjct: 1 MLERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQELDGRTISVNKAEPKMNTDDTRYD--- 57
Query: 841 XXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKF----XX 674
CF+CGR GHW R+CP+A GG FSS KF
Sbjct: 58 ---SGGGRAEYRGGRSDGPPPGNCFECGRPGHWVRDCPNAAGGRSGRFSS--KFSGGSGG 112
Query: 673 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGD 494
D+Y NDRY GD F D
Sbjct: 113 GRGDRFSGSDRFGDRYMDDRYDGGRYGYRDQVDTRDRYAGGRDRYANDRYPSGGDHFGAD 172
Query: 493 RYRGGPDHYPHSGYNREK---------------------------SYERDVPRGGSYDRD 395
RY GGPD Y SGY RE+ SY+RD PRGG YDRD
Sbjct: 173 RYGGGPDRYAPSGYGRERERSYERDGVRGGGGGGGYDRSGPRGGGSYDRDGPRGGGYDRD 232
Query: 394 PAXXXXXXXXXXXXXXXXXXXXXXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYDVRY 218
PARY+ GGS+R+R GPYDRP RGG +D RY
Sbjct: 233 ------------GPRGGVTDRYGGGGPARYD-GGSYRERPGPYDRPSRGG--GRFDDRY 276
>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 164 bits (415), Expect = 3e-37
Identities = 102/270 (37%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Frame = -2
Query: 1024 IMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDXX 845
IM ERDTGRPRGFGF+T++ R E AI +MH + R+ISVNKA+PKM D D
Sbjct: 54 IMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMGED---PDHG 110
Query: 844 XXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGG---SDSHFSSHAKFXX 674
D+CFKCGR GHWAR+CPS+GGG + F S ++F
Sbjct: 111 YNGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRF-- 168
Query: 673 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGD 494
D+Y+NDRY P GD F GD
Sbjct: 169 -SGGRGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGD 227
Query: 493 RYRGGPDHYPHSGYNREKSYERD-VPRGGSYDRDPAXXXXXXXXXXXXXXXXXXXXXXXX 317
RY GG D YP +GY +++ Y+RD PRGG DR
Sbjct: 228 RY-GGSDRYPQNGYGKDRGYDRDAAPRGGG-DR-----------------------YAGG 262
Query: 316 PARYNGGGSFRQRHGPYDRPGRGGRTSSYD 227
+ N G S+R R GPYDRP RGGR SS+D
Sbjct: 263 GSARNEGRSYRNRPGPYDRPNRGGRPSSFD 292
>ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein
ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 164 bits (414), Expect = 4e-37
Identities = 112/281 (39%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ER T R RGFGFVTF RA ++AI +MH E+DGR ISVNKAEPKM+TD +RY
Sbjct: 37 QIMVERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVNKAEPKMNTDDTRY-- 94
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKF---- 680
CF+CGR GHW R+CPSA GG F S KF
Sbjct: 95 ----AGGGGRGEYRGGRGDGPPPGNCFECGRPGHWVRDCPSAAGGRSGRFPS--KFSGGS 148
Query: 679 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQ 500
D+Y NDRY GD F
Sbjct: 149 GVGRGDRFSGSDRFGDRYMDDRYDGGRYGYRDQADARDRYAGGRDRYANDRYPSGGDHFG 208
Query: 499 GDRYRGGPDHYPHSGY--NREKSYERDVPR-----GGSYDRDPAXXXXXXXXXXXXXXXX 341
GDRY GGPD Y SGY RE+SYERD R GG YDR
Sbjct: 209 GDRYGGGPDCYVPSGYGRERERSYERDGVRGGGGGGGGYDRS--------GPRGGGGYDR 260
Query: 340 XXXXXXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYDVRY 218
ARY+ GG++R+R GPYDRP RGGR +D RY
Sbjct: 261 DGPRGGGGSARYD-GGNYRERPGPYDRPSRGGR---FDDRY 297
>ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group] gi|31712074|gb|AAP68379.1|
putative RNA-binding protein [Oryza sativa Japonica
Group] gi|108710427|gb|ABF98222.1| RNA recognition motif
family protein, expressed [Oryza sativa Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa
Japonica Group] gi|215692670|dbj|BAG88090.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product
[Oryza sativa Japonica Group] gi|222625569|gb|EEE59701.1|
hypothetical protein OsJ_12125 [Oryza sativa Japonica
Group]
Length = 308
Score = 163 bits (412), Expect = 7e-37
Identities = 112/277 (40%), Positives = 130/277 (46%), Gaps = 15/277 (5%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ER T R RGFGFVTFS A ++AI +MH ELDGR ISVNKAEPKM+TD +RY+
Sbjct: 37 QIMLERHTQRHRGFGFVTFSDPEAVDSAIKEMHCQELDGRTISVNKAEPKMNTDDTRYE- 95
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKFXXXX 668
CF+CGR+GHWAR+CP+ GGG + +SS +KF
Sbjct: 96 -----SGGGRGEYRGGRGDGPPPGNCFECGRAGHWARDCPNPGGGRSARYSS-SKF--SA 147
Query: 667 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGDRY 488
D+Y NDRY GD + DRY
Sbjct: 148 GGRGDRFSGSDRFGDRYMDDRYDGGYREPVDVRDRYGGGRDRYANDRYPSGGDRYVPDRY 207
Query: 487 RGGPDHYPHSGY--NREKSYERDVPR------------GGSYDRD-PAXXXXXXXXXXXX 353
GGPD Y S Y RE+SYERD R GGSYDRD P
Sbjct: 208 -GGPDRYQPSSYGRERERSYERDGVRGNGGYDRSGPRGGGSYDRDGPRGGISGGYDRDGP 266
Query: 352 XXXXXXXXXXXXPARYNGGGSFRQRHGPYDRPGRGGR 242
PARY+ GGS+R R GPYDRP RGGR
Sbjct: 267 RGGGVDRYGGGGPARYD-GGSYRDRSGPYDRPSRGGR 302
>tpg|DAA50686.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 259
Score = 160 bits (405), Expect = 5e-36
Identities = 110/279 (39%), Positives = 125/279 (44%), Gaps = 11/279 (3%)
Frame = -2
Query: 1021 MKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDXXX 842
M ER T R RGFGFVTF RA ++AI +MH E+DGR ISVNKAEPKM+TD +RY
Sbjct: 1 MVERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVNKAEPKMNTDDTRY---- 56
Query: 841 XXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKF----XX 674
CF+CGR GHW R+CPSA GG F S KF
Sbjct: 57 --AGGGGRGEYRGGRGDGPPPGNCFECGRPGHWVRDCPSAAGGRSGRFPS--KFSGGSGV 112
Query: 673 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGD 494
D+Y NDRY GD F GD
Sbjct: 113 GRGDRFSGSDRFGDRYMDDRYDGGRYGYRDQADARDRYAGGRDRYANDRYPSGGDHFGGD 172
Query: 493 RYRGGPDHYPHSGY--NREKSYERDVPR-----GGSYDRDPAXXXXXXXXXXXXXXXXXX 335
RY GGPD Y SGY RE+SYERD R GG YDR
Sbjct: 173 RYGGGPDCYVPSGYGRERERSYERDGVRGGGGGGGGYDRS--------GPRGGGGYDRDG 224
Query: 334 XXXXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYDVRY 218
ARY+ GG++R+R GPYDRP RGGR +D RY
Sbjct: 225 PRGGGGSARYD-GGNYRERPGPYDRPSRGGR---FDDRY 259
>gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 311
Score = 160 bits (405), Expect = 5e-36
Identities = 110/277 (39%), Positives = 125/277 (45%), Gaps = 16/277 (5%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ER T R RGFGFVTF RA ++AI +M ELDGR ISVNKAEPKM+TD +R+D
Sbjct: 37 QIMLERHTYRHRGFGFVTFEDRRAVDSAIKEMRGQELDGRTISVNKAEPKMNTDDTRFD- 95
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKF-XXX 671
C++CGR GHW R+CPSA GG F S KF
Sbjct: 96 -----SGGGRGEYRGGRGDGPPPGNCYECGRPGHWVRDCPSAAGGRSGRFPS--KFSGGG 148
Query: 670 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGDR 491
D+Y NDRY GD F GDR
Sbjct: 149 RGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHFDGDR 208
Query: 490 YRGGPDHYPHSGY--NREKSYERDVPR------------GGSYDRD-PAXXXXXXXXXXX 356
Y GG D Y +GY RE+SYERD R GGSYDRD P
Sbjct: 209 YGGGLDRYAPNGYGRERERSYERDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGYVRDG 268
Query: 355 XXXXXXXXXXXXXPARYNGGGSFRQRHGPYDRPGRGG 245
PARY+ GGS+R+R GPYDRP RGG
Sbjct: 269 PRGGVADRYGGGGPARYD-GGSYRERPGPYDRPSRGG 304
>ref|XP_002315330.1| glycine-rich RNA-binding family protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 280
Score = 160 bits (404), Expect = 6e-36
Identities = 104/277 (37%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
Q+M ERDTGRPRGFGF+TF+ RA + AI +MH + RVISVNKA+PK+ D S D
Sbjct: 37 QVMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKIGGDDS--DH 94
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAG--GGSDSHFSSHAKFXX 674
DECFKCGRSGHWAR+CPSAG GG SS ++F
Sbjct: 95 GYRGGYSTGSRGGYGGGDRPAGQDECFKCGRSGHWARDCPSAGGRGGGGGLISSRSRF-G 153
Query: 673 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGD 494
D+Y +DRY P GD F GD
Sbjct: 154 GAGDRGDRFGGDRDRYIDDRYDGGRYGDKDRFDSRDNKYGGRDRYASDRYPPNGDRFSGD 213
Query: 493 RYRGGPDHYPHSGYNREKSYERDV-PRGGSYDRDPAXXXXXXXXXXXXXXXXXXXXXXXX 317
RY GG D Y +GY ++K Y+RDV PRGG+
Sbjct: 214 RY-GGSDRYAQNGYGKDKGYDRDVGPRGGN------------------------------ 242
Query: 316 PARYNGGG-------SFRQRHGPYDRPGRGGRTSSYD 227
RY GG S+R R PYDRP RGG SS++
Sbjct: 243 -DRYGSGGPQRNDRSSYRNRPAPYDRPSRGGHPSSFE 278
>ref|XP_004307343.1| PREDICTED: uncharacterized protein LOC101306961 [Fragaria vesca
subsp. vesca]
Length = 284
Score = 158 bits (399), Expect = 2e-35
Identities = 106/274 (38%), Positives = 125/274 (45%), Gaps = 7/274 (2%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDIS---- 860
QIM ERDT RPRGFGF+TF RA E AI +MH EL R ISVNKA+P+M + S
Sbjct: 37 QIMLERDTKRPRGFGFITFGDRRAMEDAIREMHGQELGSRTISVNKAQPRMGGEDSDHGY 96
Query: 859 RYDXXXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAG---GGSDSHFSSH 689
R DECFKCGR+GHWAR+CPSAG GG FSSH
Sbjct: 97 RGGGGGGGYSSGGRRSYGGGGDRSVGQDECFKCGRTGHWARDCPSAGGGRGGGGGSFSSH 156
Query: 688 AKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGD 509
++F D+Y++DRY P GD
Sbjct: 157 SRF--GGGGRVDRFGGDHDRYMDDRYDGGRYGDRDRFDSREDKYGSRDRYVSDRY-PAGD 213
Query: 508 EFQGDRYRGGPDHYPHSGYNREKSYERDVPRGGSYDRDPAXXXXXXXXXXXXXXXXXXXX 329
F DRY GG D YP +GY +++ Y+RD G DR
Sbjct: 214 RFASDRY-GGSDRYPQNGYGKDRGYDRDGGVRGGSDR----------------------Y 250
Query: 328 XXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYD 227
PAR GG +R R GPYDRP RGGR SS+D
Sbjct: 251 GRGGPARDEGG--YRSRAGPYDRPSRGGRPSSFD 282
>ref|NP_001130195.1| uncharacterized protein LOC100191289 [Zea mays]
gi|194688516|gb|ACF78342.1| unknown [Zea mays]
Length = 311
Score = 158 bits (399), Expect = 2e-35
Identities = 109/277 (39%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ER T R RGFGFVTF RA ++AI +M E DGR ISVNKAEPKM+TD +R+D
Sbjct: 37 QIMLERHTYRHRGFGFVTFEDRRAVDSAIKEMRGQESDGRTISVNKAEPKMNTDDTRFD- 95
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKF-XXX 671
C++CGR GHW R+CPSA GG F S KF
Sbjct: 96 -----SGGGRGEYRGGRGDGPPPGNCYECGRPGHWVRDCPSAAGGRSGRFPS--KFSGGG 148
Query: 670 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGDR 491
D+Y NDRY GD F GDR
Sbjct: 149 RGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHFDGDR 208
Query: 490 YRGGPDHYPHSGY--NREKSYERDVPR------------GGSYDRD-PAXXXXXXXXXXX 356
Y GG D Y +GY RE+SYERD R GGSYDRD P
Sbjct: 209 YGGGLDRYAPNGYGRERERSYERDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGYVRDG 268
Query: 355 XXXXXXXXXXXXXPARYNGGGSFRQRHGPYDRPGRGG 245
PARY+ GGS+R+R GPYDRP RGG
Sbjct: 269 PRGGVADRYGGGGPARYD-GGSYRERPGPYDRPSRGG 304
>ref|XP_004955701.1| PREDICTED: glycine-rich RNA-binding protein 7-like [Setaria italica]
Length = 307
Score = 157 bits (398), Expect = 3e-35
Identities = 104/280 (37%), Positives = 125/280 (44%), Gaps = 10/280 (3%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
Q++ ERDTGR RGFGFVTFS RA +AAI MH ELDGR ISVNKA+P+ + D Y
Sbjct: 37 QVVVERDTGRSRGFGFVTFSEPRAVDAAIRGMHNGELDGRNISVNKAQPRNADDGYGYGG 96
Query: 847 XXXXXXXXXXXXXXXXXXXXXR--------TDECFKCGRSGHWARECP-SAGGGSDSHFS 695
+D+CFKCGR GHWARECP S GGG +S
Sbjct: 97 GGGGGGGGGGGYSSGARGGYRSGGDVVPAASDDCFKCGRPGHWARECPYSDGGGRTGRYS 156
Query: 694 SHAKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPP 515
+++ +Y +DRY P
Sbjct: 157 PASRYGGGTGGRGDRFGGSDRFARYDDDRYDGGRYMDSRDTYYGAGRD--RYASDRYAPA 214
Query: 514 GDEFQGDRYRGGPDHYPHSGYNREKSYERDVPR-GGSYDRDPAXXXXXXXXXXXXXXXXX 338
D + GDRY GG D Y SG+ RE+SYERD R G Y RD +
Sbjct: 215 ADRYSGDRYGGGADRYASSGFARERSYERDGGRSSGGYYRDDS-----RSSGGYGRGGSR 269
Query: 337 XXXXXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYDVRY 218
PAR+ GGS+R R PYDRP RG +YD RY
Sbjct: 270 VGGGAAGPARF--GGSYRDRPAPYDRPSRGAGARAYDDRY 307
>ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Populus trichocarpa]
gi|550332329|gb|EEE89356.2| hypothetical protein
POPTR_0008s03290g [Populus trichocarpa]
Length = 279
Score = 157 bits (397), Expect = 4e-35
Identities = 104/277 (37%), Positives = 126/277 (45%), Gaps = 10/277 (3%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
Q+M ERDTGRPRGFGF+TF+ RA + AI +MH + RVISVNKA+PKM D S D
Sbjct: 37 QVMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKMGGDDS--DH 94
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAG--GGSDSHFSSHAKFXX 674
DECFKCGRSGHWAR+CPSAG GG SS ++F
Sbjct: 95 GYRGGYSTGSRGGYGGGDRPAGQDECFKCGRSGHWARDCPSAGARGGGGGLLSSRSRF-- 152
Query: 673 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPP-GDEFQG 497
D+Y +DRY PP GD F G
Sbjct: 153 GGAGDRGDRFGGDRDRYMDDRYDGGRYGDRDRFESRDKYGGRDRYASDRYPPPNGDRFAG 212
Query: 496 DRYRGGPDHYPHSGYNREKSYERD-VPRGGSYDRDPAXXXXXXXXXXXXXXXXXXXXXXX 320
DRY G D Y +GY +++ Y+RD PRGG+
Sbjct: 213 DRY-SGSDRYAQNGYGKDRGYDRDGGPRGGN----------------------------- 242
Query: 319 XPARYNGGG------SFRQRHGPYDRPGRGGRTSSYD 227
RY GG S++ R GPYDRP RGGR SS++
Sbjct: 243 --DRYGSGGPSRNDRSYKNRPGPYDRPSRGGRPSSFE 277
>gb|EMT10048.1| Glycine-rich RNA-binding protein 2 [Aegilops tauschii]
Length = 352
Score = 157 bits (397), Expect = 4e-35
Identities = 104/278 (37%), Positives = 123/278 (44%), Gaps = 8/278 (2%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYD- 851
Q++ ERDTGR RGFGFVTFS RA + AI +MH ELDGR ISVNKA+P+M++D Y
Sbjct: 96 QVVTERDTGRSRGFGFVTFSEPRAVDVAIREMHNGELDGRTISVNKAQPRMNSDDGGYGY 155
Query: 850 XXXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKFXXX 671
+D+CFKCGR GHWARECP + GG +S +++
Sbjct: 156 GGSSYSSGARGGYRGAADIVPAASDDCFKCGRPGHWARECPYSDGGRPGRYSPPSRYGNG 215
Query: 670 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGDR 491
DRY P D F GDR
Sbjct: 216 AGGRGDRLGGSDRFGNRYVDDRYDGGHYADDRYGGG---------RDRYPPAADRFSGDR 266
Query: 490 YRGGPDHYPHSGYNREKSYERDVPR-GGSYDRDPAXXXXXXXXXXXXXXXXXXXXXXXXP 314
Y GG D Y +G+ RE+SYERD R GGSY RD
Sbjct: 267 Y-GGGDRYASAGFARERSYERDGGRTGGSYYRDEPRGTGGYGRGGPRVANGD-------- 317
Query: 313 ARYNGGG------SFRQRHGPYDRPGRGGRTSSYDVRY 218
RY GG S+R R PYDRP RG R SYD RY
Sbjct: 318 -RYGSGGPARLGASYRDRPAPYDRPTRGAR--SYDDRY 352
>ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 156 bits (395), Expect = 6e-35
Identities = 108/278 (38%), Positives = 124/278 (44%), Gaps = 8/278 (2%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYD- 851
Q++ ERDTGR RGFGFVTFS RA++AAI +MH ELDGR ISVNKA+P+M+TD Y
Sbjct: 37 QVVTERDTGRSRGFGFVTFSEPRAADAAIREMHNGELDGRTISVNKAQPRMNTDDGGYGY 96
Query: 850 XXXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGG------SDSHFSSH 689
+D+CFKCGR GHWARECP A GG +D +SS
Sbjct: 97 GGGGYSSGARGGYRGAGDAVPAASDDCFKCGRPGHWARECPYADGGRPGSRYADDRYSSG 156
Query: 688 AKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGD 509
DRY P D
Sbjct: 157 ---------------------------------------------------RDRYPPAAD 165
Query: 508 EFQGDRYRGGPDHYPHSGYNREKSYERDVPR-GGSYDRDPAXXXXXXXXXXXXXXXXXXX 332
F GDRY G D Y G+ RE+SYERD R GGSY RD
Sbjct: 166 RFSGDRY-AGADRYASGGFARERSYERDGGRPGGSYYRD-EPRATGGYGRGGPRVANGDR 223
Query: 331 XXXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYDVRY 218
PAR+ GGS+R R PYDRP RG SYD RY
Sbjct: 224 YGSGGPARF--GGSYRDRPAPYDRPSRGA-ARSYDDRY 258
>gb|EOY18828.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 1 [Theobroma cacao]
Length = 276
Score = 156 bits (394), Expect = 8e-35
Identities = 104/271 (38%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ERDT RPRGFGF+TF+ R+ + AI +MH E R+ISVNKA+PKM D+
Sbjct: 37 QIMLERDTRRPRGFGFITFADRRSMDEAIREMHGREFGERIISVNKAQPKMGEDLDH--- 93
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAG----GGSDSHFSSHAKF 680
DECFKCGR GHWAR+CPSAG GGS FSS +++
Sbjct: 94 -GYRGYSSSGRGGYAGGDRPVGQDECFKCGRFGHWARDCPSAGGGGRGGSGGMFSSRSRY 152
Query: 679 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQ 500
D+Y+ DRY P GD F
Sbjct: 153 --GGADDRGDRFRDRDRYVDDRYDGGRYGDRDRFDSRDDRYGSRDRYIGDRYPPSGDRF- 209
Query: 499 GDRYRGGPDHYPHSGYNREKSYERDVPRGGSYDRDPAXXXXXXXXXXXXXXXXXXXXXXX 320
GDRY GG DH+P +GY +E+++ R G DR
Sbjct: 210 GDRY-GGSDHFPQNGYGKERAFRDVASRSG--DR----------------------YGSG 244
Query: 319 XPARYNGGGSFRQRHGPYDRPGRGGRTSSYD 227
PAR N G S+R R GPYDRPGRGGR SS+D
Sbjct: 245 GPAR-NDGRSYRNRGGPYDRPGRGGRPSSFD 274
>gb|EMT02366.1| Glycine-rich RNA-binding protein 2 [Aegilops tauschii]
Length = 318
Score = 156 bits (394), Expect = 8e-35
Identities = 109/289 (37%), Positives = 123/289 (42%), Gaps = 19/289 (6%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYDX 848
QIM ER T R RGFGFVTFS RA E AI+ MH ELDGR ISVN+AEPKM TD +RY
Sbjct: 37 QIMLERHTNRHRGFGFVTFSDPRAVETAINDMHNKELDGRTISVNRAEPKMQTDDTRYS- 95
Query: 847 XXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHF-SSHAKFXXX 671
CF+CGR+GHWAR+CP+ GGG F S +
Sbjct: 96 --SGGGGGDRGDYRGGKGDGPPPGNCFECGRAGHWARDCPNPGGGRSGRFPSKFSGGGGR 153
Query: 670 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYGPPGDEFQGDR 491
D+Y +DRY GD F DR
Sbjct: 154 GDRFSGSDRFGDRYVDDRYDGGRYGGYREPIDSRDRYDGGRDRYASDRYPSGGDRFGADR 213
Query: 490 YRGGPDHYPHS------GYNREKSYERDVPRGG------------SYDRDPAXXXXXXXX 365
Y PD Y S G RE+SYERD RGG SYDRD
Sbjct: 214 YGAAPDRYAPSGGGGGYGRERERSYERDGIRGGGAYDRSGPRGGASYDRDGPRGGIGGGY 273
Query: 364 XXXXXXXXXXXXXXXXPARYNGGGSFRQRHGPYDRPGRGGRTSSYDVRY 218
PARY GGG +R+R PYDRP GGR +D RY
Sbjct: 274 DRDGPRGGGADYGSGGPARYEGGG-YRERPAPYDRPRGGGR---FDDRY 318
>gb|EMS46305.1| Glycine-rich RNA-binding protein 2 [Triticum urartu]
Length = 308
Score = 156 bits (394), Expect = 8e-35
Identities = 105/285 (36%), Positives = 126/285 (44%), Gaps = 15/285 (5%)
Frame = -2
Query: 1027 QIMKERDTGRPRGFGFVTFSSARASEAAISQMHENELDGRVISVNKAEPKMSTDISRYD- 851
Q++ ERDTGR RGFGFVTFS RA + AI +MH ELDGR ISVNKA+P+M++D Y
Sbjct: 52 QVVTERDTGRSRGFGFVTFSEPRAVDVAIREMHNGELDGRTISVNKAQPRMNSDDGGYGY 111
Query: 850 XXXXXXXXXXXXXXXXXXXXXXRTDECFKCGRSGHWARECPSAGGGSDSHFSSHAKFXXX 671
+D+CFKCGR GHWARECP + GG +S +++
Sbjct: 112 GGSSYSSGARGGYRGAADIVPTASDDCFKCGRPGHWARECPYSDGGRPGRYSPPSRY--- 168
Query: 670 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKYMNDRYG-------PPG 512
+Y +DRYG P
Sbjct: 169 -------------GNGAGGRGDRFGGSDRFGNRYVDDRYDGGRYADDRYGGGRDRYPPAA 215
Query: 511 DEFQGDRYRGGPDHYPHSGYNREKSYERDVPR-GGSYDRDPAXXXXXXXXXXXXXXXXXX 335
D F GDRY GG D Y G+ RE+SYERD R GGSY RD
Sbjct: 216 DRFSGDRY-GGGDRYASGGFARERSYERDGGRPGGSYYRDEPRGTGAYGRGGPRVANGD- 273
Query: 334 XXXXXXPARYNGGG------SFRQRHGPYDRPGRGGRTSSYDVRY 218
RY GG S+R R PYDRP +G R SYD RY
Sbjct: 274 --------RYGSGGPARLGASYRDRPAPYDRPTQGAR--SYDDRY 308