BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00006658
         (1591 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08734.1| Transcription elongation factor family protein, p...   271   4e-70
gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus pe...   268   4e-69
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...   266   2e-68
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr...   261   6e-67
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera...   260   1e-66
ref|XP_003521115.1| PREDICTED: probable mediator of RNA polymera...   254   6e-65
ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymera...   251   8e-64
ref|XP_006576772.1| PREDICTED: probable mediator of RNA polymera...   250   1e-63
ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymera...   249   2e-63
gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]     248   5e-63
gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus...   248   7e-63
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu...   245   3e-62
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera...   245   4e-62
ref|XP_006836259.1| hypothetical protein AMTR_s00101p00137160 [A...   245   4e-62
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu...   243   2e-61
gb|AFK48326.1| unknown [Medicago truncatula]                          243   2e-61
ref|XP_002308874.2| transcription elongation factor-related fami...   242   3e-61
gb|EOY08735.1| Transcription elongation factor family protein, p...   242   4e-61
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera...   242   4e-61
ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago ...   242   4e-61

>gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1
            [Theobroma cacao]
          Length = 464

 Score =  271 bits (694), Expect = 4e-70
 Identities = 190/462 (41%), Positives = 236/462 (51%), Gaps = 46/462 (9%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC----------------------VGAADGEEG--- 108
            P EFR RR Q+AEKLFT    RC GC                       G AD E+G   
Sbjct: 38   PKEFRLRRDQIAEKLFTCKFTRCSGCDRVKLVVPEYGADNGRGCRARFKGEADEEDGCEF 97

Query: 109  -DGSVKRDDVVKRSNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILV 285
             +    ++     S DD     +N I SNYSY                     RIK+IL 
Sbjct: 98   FEAGGSKESKANSSRDD---PLINQIASNYSYGEAEALTDEIEEESMMVGEVYRIKEILH 154

Query: 286  NYQDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKV 465
            N QDESDSVLF+SLRRLQLM L+V++L AT IG+AV+ VRKH+SKQIRHLA+TLI+GWK 
Sbjct: 155  NSQDESDSVLFDSLRRLQLMALTVDILKATGIGKAVNRVRKHSSKQIRHLAQTLIDGWKE 214

Query: 466  LADEWVSATPAIPENSPDSINLPM-------------EDEEGLPFPPLDEGALFATQTAP 606
            L DEWV+A  AI E +P+S+N  +             E+EEGLP PPLD GA FATQ   
Sbjct: 215  LVDEWVNAAKAIAEGTPESVNPSVLDNEEEKEEEEEEEEEEGLPSPPLDVGAFFATQPTS 274

Query: 607  MQLSK------XXXXXXXXXPSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKE 768
            M+LS+                 I+  D ++K     Q  + K K +T  +A  +    K+
Sbjct: 275  MELSQFFDGMDDDGNPRNSGEFIKNLDNRRKPSQENQ-NVSKRKQQTSSEAVLLT---KD 330

Query: 769  DSSRQEWRCLSNPEDXXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPVSGSGKPSKL 948
            D SRQ  R    P D                              K +    GSG+P K 
Sbjct: 331  DKSRQMKR--QEPVDNPN--------------------------NKPQRKNMGSGRPPKH 362

Query: 949  ISEQKASTEAKLKRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAE 1128
              EQKA+ E+KL    D  A+ +K     QDK K S+D  ++ KLE  KRKLQE YQQAE
Sbjct: 363  DMEQKANFESKLLLKSDKMAVPKKPLSSQQDKFKTSDDIAVQRKLEATKRKLQERYQQAE 422

Query: 1129 NAKKQRTIQVMELHDLPKK-VVNKPQFSKSKNKIKGWANGRR 1251
            NAK++RTIQVMELHDLPK+  V K  + K  N  + W NGRR
Sbjct: 423  NAKRKRTIQVMELHDLPKQGSVPKNAYMKPGNHNRQWVNGRR 464


>gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus persica]
          Length = 444

 Score =  268 bits (686), Expect = 4e-69
 Identities = 171/442 (38%), Positives = 237/442 (53%), Gaps = 26/442 (5%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAADGEEGD-----------------G 114
            P EF+ RR ++AE+LF+  L RC GC      V   DGE+ D                  
Sbjct: 38   PKEFKLRRDRIAERLFSCRLTRCSGCDKMELAVPGGDGEDDDDDGGCKSGFDRDGGEVEA 97

Query: 115  SVKRDDVVKRSNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQ 294
               ++  V  S DD G  ++N + SNYSY                     RIK+I  N +
Sbjct: 98   GASKESKVNSSRDDQGEMNMNQL-SNYSYGLAEALTAEIEEESEIVGEVFRIKEIFNNCE 156

Query: 295  DESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLAD 474
            +ESD+VLFESLR+LQLM L+VE L AT IG+AV+G+RKH SK+IRHLAR+LI+GWK + D
Sbjct: 157  EESDTVLFESLRKLQLMALNVETLKATEIGKAVNGLRKHGSKKIRHLARSLIDGWKDMVD 216

Query: 475  EWVSATPAI--PENSPDSINLPMEDEEGLPFPPLDEGALFATQTAPMQLSKXXXXXXXXX 648
            EWV+AT A+   E   DS++   +DEEGLP PPLDEGA FATQT  M+LS+         
Sbjct: 217  EWVNATTALAGTEAMSDSVDPSFDDEEGLPSPPLDEGAFFATQTTSMELSQFFDGMDDFG 276

Query: 649  PSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXX 828
                  D  +K  + KQ  I K K +   +A  +  + K +  +++              
Sbjct: 277  NPRNNRDNGRKPSVEKQ-NIVKQKQQPSNEANVLPKENKNEQVKKQ-------------- 321

Query: 829  XXXXXXXEKLRETFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNSA 1008
                   E ++   +S  +            SG G+P K+  EQK + E K+++  D  A
Sbjct: 322  -------EVVKPNKLSNTD------------SGPGRPPKVNMEQKVNNETKIQQKTDKVA 362

Query: 1009 LRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK- 1185
            ++++     QDK K S++  ++ KLE  KRKLQE YQQAENAK+QRT+QVMEL DLPK+ 
Sbjct: 363  IQKRQLTGQQDKFKCSDEVAVQVKLEATKRKLQERYQQAENAKRQRTVQVMELQDLPKQG 422

Query: 1186 VVNKPQFSKSKNKIKGWANGRR 1251
            +  +    K  N  + WA+GRR
Sbjct: 423  LARRNPHGKPGNHNRHWAHGRR 444


>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
            gi|223543547|gb|EEF45077.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 473

 Score =  266 bits (680), Expect = 2e-68
 Identities = 188/468 (40%), Positives = 246/468 (52%), Gaps = 52/468 (11%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAADGEEGDGSV--KRDD--------- 132
            P EFR RR ++AE+LF+  L RC GC      V A +GE  DG    +RDD         
Sbjct: 36   PKEFRLRRDRIAERLFSCRLTRCSGCNHVDLAVPAHEGENDDGGACKRRDDHHVEDDDDD 95

Query: 133  ------------------VVKRSND------DYGPEDLNG-IVSNYSYDXXXXXXXXXXX 237
                               V  SN+      D G  ++N  ++SN+SY            
Sbjct: 96   DVDIDVCEFEAGGTSKESKVNSSNNRDDNDIDIGEVNVNDQLLSNFSYGEAEALTDEIEE 155

Query: 238  XXXXXXXXSRIKQILVNYQDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNS 417
                     RIK IL++ +DES+SVLFESLRRLQLM L+V+ L AT IG+AV+G+RKH S
Sbjct: 156  ESMVVGEVLRIKDILLHSRDESESVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS 215

Query: 418  KQIRHLARTLIEGWKVLADEWVSATPAI--PENSPDSINLPMEDEE-GLPFPPLDEGALF 588
            +QIRHLAR LI+GWKVL DEW S T AI   E +P+S+N  + DEE GLP PPLDE   F
Sbjct: 216  QQIRHLARVLIDGWKVLVDEWYSTTKAIRGDEGTPESVNPSVVDEEDGLPSPPLDEAFFF 275

Query: 589  ATQTAPMQLSK------XXXXXXXXXPSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGI 750
            A Q   ++L++                 I+  +  +K  L +Q  IPK K  T  +A  +
Sbjct: 276  AAQNTGIELAQFFDGMDDDGNPRNSGEFIKNRENGRKSSL-EQKNIPKRKEHTPSEANVV 334

Query: 751  AADLKEDSSRQEWRCLSNPEDXXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPVSGS 930
            A D K   SR++                     E +R+             K    VSG 
Sbjct: 335  AKDNKSHQSRRQ---------------------EAMRKP-----------NKPSTTVSGP 362

Query: 931  GKPSKLISEQKASTEAKLKRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQE 1110
            G+P+K   EQKA+ E+K++R  D    +RK  G  QDK K S+D  ++ KLE  KRKLQE
Sbjct: 363  GRPTKQSVEQKANNESKIQRKTDKLVTQRKLPGGQQDKFKCSDDDAVQKKLEATKRKLQE 422

Query: 1111 GYQQAENAKKQRTIQVMELHDLPKK-VVNKPQFSKSKNKIKGWANGRR 1251
             YQQAENAK+QRTIQVMELHDLPK+ +V K    +  +  + WA+GRR
Sbjct: 423  RYQQAENAKRQRTIQVMELHDLPKQALVQKNPNMRPGSHNRHWAHGRR 470


>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
            gi|557532580|gb|ESR43763.1| hypothetical protein
            CICLE_v10011717mg [Citrus clementina]
          Length = 448

 Score =  261 bits (667), Expect = 6e-67
 Identities = 177/438 (40%), Positives = 236/438 (53%), Gaps = 22/438 (5%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGCVGAA------------------DGEEGDGSVKRD 129
            P EF+ RR ++AEKLFT  L RC GC                      DG E +    ++
Sbjct: 38   PKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKE 97

Query: 130  DVVKRSNDDYGPEDLNGIVSNYSY-DXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESD 306
              V    DD+     N IVSN+S  D                    RIK+IL N +DESD
Sbjct: 98   SKVNSCRDDHVS---NQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESD 154

Query: 307  SVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVS 486
            SVLFESLRRLQLM L+V+ L AT IG+AV+G+RKH SKQIRHLARTLIEGWK L DEWV+
Sbjct: 155  SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214

Query: 487  ATPAIPENSPDSIN-LPMEDEEGLPFPPLDEGALFATQTAPMQLSK-XXXXXXXXXPSIQ 660
            AT AI E +PDS+N   +++EEGLP PPLDE A FA  +A ++LS+          P   
Sbjct: 215  ATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFAGPSAGIELSQFFDGMDDFGNPRNS 274

Query: 661  IYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXXXX 840
                K ++   K +   ++  + ++Q P     L +D++  + +                
Sbjct: 275  GEFIKNRESGRKPSVENQNIAKRKQQTPNEPNVLAKDNNSLQMK---------------- 318

Query: 841  XXXEKLRETFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNSALRRK 1020
                  R+  + + N+ A   K     SG G+P K    QK   E+KL++  D +A+ +K
Sbjct: 319  ------RQEAVVRPNKPA--NKPSNTNSGPGRPLKQNMGQKVDNESKLQQKSDKAAINKK 370

Query: 1021 SSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK-VVNK 1197
                  +K K S++  ++ KLE  KRKLQE YQ AENAKKQRTIQVMELHDLPK+ + N+
Sbjct: 371  PLNSQHNKLKSSDEDAVQVKLEATKRKLQESYQLAENAKKQRTIQVMELHDLPKQGLGNR 430

Query: 1198 PQFSKSKNKIKGWANGRR 1251
                +  N  + WANGRR
Sbjct: 431  NPQLRPGNYNRHWANGRR 448


>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26b-like [Citrus sinensis]
          Length = 448

 Score =  260 bits (665), Expect = 1e-66
 Identities = 176/438 (40%), Positives = 236/438 (53%), Gaps = 22/438 (5%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGCVGAA------------------DGEEGDGSVKRD 129
            P EF+ RR ++AEKLFT  L RC GC                      DG E +    ++
Sbjct: 38   PKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKE 97

Query: 130  DVVKRSNDDYGPEDLNGIVSNYSY-DXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESD 306
              V    DD+     N IVSN+S  D                    RIK+IL N +DESD
Sbjct: 98   SKVNSCRDDHVS---NQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESD 154

Query: 307  SVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVS 486
            SVLFESLRRLQLM L+V+ L AT IG+AV+G+RKH SKQIRHLARTLIEGWK L DEWV+
Sbjct: 155  SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214

Query: 487  ATPAIPENSPDSIN-LPMEDEEGLPFPPLDEGALFATQTAPMQLSK-XXXXXXXXXPSIQ 660
            AT AI E +PDS+N   +++EEGLP PPLDE A FA  +A ++LS+          P   
Sbjct: 215  ATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFAGPSAGIELSQFFDGMDDFGNPRNS 274

Query: 661  IYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXXXX 840
                K ++   K +   ++  + ++Q P     L +D++  + +                
Sbjct: 275  GEFIKNRESGRKPSVENQNIAKRKQQTPNEPNVLAKDNNSLQMK---------------- 318

Query: 841  XXXEKLRETFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNSALRRK 1020
                  R+  + + N+ +   K     SG G+P K    QK   E+KL++  D +A+ +K
Sbjct: 319  ------RQEAVVRPNKPS--NKPSSTNSGPGRPLKQNMGQKVDNESKLQQKSDKAAINKK 370

Query: 1021 SSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK-VVNK 1197
                  +K K S++  ++ KLE  KRKLQE YQ AENAKKQRTIQVMELHDLPK+ + N+
Sbjct: 371  PLNSQHNKLKSSDEDAVQVKLEATKRKLQESYQLAENAKKQRTIQVMELHDLPKQGLGNR 430

Query: 1198 PQFSKSKNKIKGWANGRR 1251
                +  N  + WANGRR
Sbjct: 431  NPQLRPGNYNRHWANGRR 448


>ref|XP_003521115.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26b-like isoform X1 [Glycine max]
          Length = 452

 Score =  254 bits (650), Expect = 6e-65
 Identities = 173/441 (39%), Positives = 230/441 (52%), Gaps = 25/441 (5%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAA------DGEEGDGS---VKRDDVV 138
            P EFR RR  +AE+LF+  L RC GC      VGA       DG++GD      +RD V 
Sbjct: 36   PKEFRVRRDWIAERLFSCRLTRCVGCDRVELAVGADSKKEKHDGDDGDNDKSGFERDGVE 95

Query: 139  KRSNDDYGPEDLNGIV----SNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESD 306
                       +NG      SNYS+                     RIK +L+N +DES+
Sbjct: 96   FEGAGASKESKVNGDANLGDSNYSFGEAEALSDEMEEESQYVAEILRIKDVLLNPEDESE 155

Query: 307  SVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVS 486
            +V+FESLRRLQLMEL+V+ L AT IG+AV+ +RKH SK IR LARTLI GWK + DEWV 
Sbjct: 156  AVIFESLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKDIRQLARTLINGWKEMVDEWVK 215

Query: 487  A--TPAIPENSPDSIN---LPMEDEEGLPFPPLDEGALFATQTAPMQLSKXXXXXXXXXP 651
            A  T AI E +PDS+N   +  ++EEGLP PPLDEGA F TQ   M+LS           
Sbjct: 216  ATTTTAITEGTPDSVNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSMELS----------- 264

Query: 652  SIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXX 831
              Q +D       P+  T P  K     + P        DS   E R L    D      
Sbjct: 265  --QFFDGMDDDGNPR-PTGPFSKNHENGRKPAF------DSHVLEMRKLQPSHDTVVINR 315

Query: 832  XXXXXXE-KLRETFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNSA 1008
                  + K  +  +        VT      SG G+P K   ++K++ E K+++  +N++
Sbjct: 316  DVKSQQQAKENKAAVMPVRPNKPVTAD----SGPGRPPKSNVQRKSNMEPKMQQKMENNS 371

Query: 1009 LRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKKV 1188
            + R+      DK+K S+D  ++ KLE  KRKLQE YQQAE AK+QRTIQVME++DLPK+ 
Sbjct: 372  ITRRPPTAQLDKSKRSDDDAVQVKLEATKRKLQESYQQAEKAKRQRTIQVMEINDLPKQG 431

Query: 1189 VNKPQFSKSKNKIKGWANGRR 1251
            +++    K     + WANGRR
Sbjct: 432  LHRNTHFKPGYHSRHWANGRR 452


>ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26b-like isoform X4 [Glycine max]
          Length = 453

 Score =  251 bits (640), Expect = 8e-64
 Identities = 171/442 (38%), Positives = 228/442 (51%), Gaps = 26/442 (5%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAA------DGEEGDGS---VKRDDVV 138
            P EFR RR  +AE+LF+  L RC GC      VGA       DG++GD      +RD V 
Sbjct: 36   PKEFRVRRDWIAERLFSCRLTRCVGCDRVELAVGADSKKEKHDGDDGDNDKSGFERDGVE 95

Query: 139  KRSNDDYGPEDLNGIV----SNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESD 306
                       +NG      SNYS+                     RIK +L+N +DES+
Sbjct: 96   FEGAGASKESKVNGDANLGDSNYSFGEAEALSDEMEEESQYVAEILRIKDVLLNPEDESE 155

Query: 307  SVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVS 486
            +V+FESLRRLQLMEL+V+ L AT IG+AV+ +RKH SK IR LARTLI GWK + DEWV 
Sbjct: 156  AVIFESLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKDIRQLARTLINGWKEMVDEWVK 215

Query: 487  ATPA---IPENSPDSIN---LPMEDEEGLPFPPLDEGALFATQTAPMQLSKXXXXXXXXX 648
            AT       E +PDS+N   +  ++EEGLP PPLDEGA F TQ   M+LS          
Sbjct: 216  ATTTTAITEEGTPDSVNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSMELS---------- 265

Query: 649  PSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXX 828
               Q +D       P+  T P  K     + P        DS   E R L    D     
Sbjct: 266  ---QFFDGMDDDGNPR-PTGPFSKNHENGRKPAF------DSHVLEMRKLQPSHDTVVIN 315

Query: 829  XXXXXXXE-KLRETFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNS 1005
                   + K  +  +        VT      SG G+P K   ++K++ E K+++  +N+
Sbjct: 316  RDVKSQQQAKENKAAVMPVRPNKPVTAD----SGPGRPPKSNVQRKSNMEPKMQQKMENN 371

Query: 1006 ALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK 1185
            ++ R+      DK+K S+D  ++ KLE  KRKLQE YQQAE AK+QRTIQVME++DLPK+
Sbjct: 372  SITRRPPTAQLDKSKRSDDDAVQVKLEATKRKLQESYQQAEKAKRQRTIQVMEINDLPKQ 431

Query: 1186 VVNKPQFSKSKNKIKGWANGRR 1251
             +++    K     + WANGRR
Sbjct: 432  GLHRNTHFKPGYHSRHWANGRR 453


>ref|XP_006576772.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26b-like isoform X2 [Glycine max]
            gi|571445333|ref|XP_006576773.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26b-like isoform X3 [Glycine max]
          Length = 455

 Score =  250 bits (638), Expect = 1e-63
 Identities = 171/444 (38%), Positives = 228/444 (51%), Gaps = 28/444 (6%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAA------DGEEGDGS---VKRDDVV 138
            P EFR RR  +AE+LF+  L RC GC      VGA       DG++GD      +RD V 
Sbjct: 36   PKEFRVRRDWIAERLFSCRLTRCVGCDRVELAVGADSKKEKHDGDDGDNDKSGFERDGVE 95

Query: 139  KRSNDDYGPEDLNGIV----SNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESD 306
                       +NG      SNYS+                     RIK +L+N +DES+
Sbjct: 96   FEGAGASKESKVNGDANLGDSNYSFGEAEALSDEMEEESQYVAEILRIKDVLLNPEDESE 155

Query: 307  SVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVS 486
            +V+FESLRRLQLMEL+V+ L AT IG+AV+ +RKH SK IR LARTLI GWK + DEWV 
Sbjct: 156  AVIFESLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKDIRQLARTLINGWKEMVDEWVK 215

Query: 487  ATPAI-----PENSPDSIN---LPMEDEEGLPFPPLDEGALFATQTAPMQLSKXXXXXXX 642
            AT         E +PDS+N   +  ++EEGLP PPLDEGA F TQ   M+LS        
Sbjct: 216  ATTTTAITGSEEGTPDSVNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSMELS-------- 267

Query: 643  XXPSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXX 822
                 Q +D       P+  T P  K     + P        DS   E R L    D   
Sbjct: 268  -----QFFDGMDDDGNPR-PTGPFSKNHENGRKPAF------DSHVLEMRKLQPSHDTVV 315

Query: 823  XXXXXXXXXE-KLRETFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQD 999
                     + K  +  +        VT      SG G+P K   ++K++ E K+++  +
Sbjct: 316  INRDVKSQQQAKENKAAVMPVRPNKPVTAD----SGPGRPPKSNVQRKSNMEPKMQQKME 371

Query: 1000 NSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLP 1179
            N+++ R+      DK+K S+D  ++ KLE  KRKLQE YQQAE AK+QRTIQVME++DLP
Sbjct: 372  NNSITRRPPTAQLDKSKRSDDDAVQVKLEATKRKLQESYQQAEKAKRQRTIQVMEINDLP 431

Query: 1180 KKVVNKPQFSKSKNKIKGWANGRR 1251
            K+ +++    K     + WANGRR
Sbjct: 432  KQGLHRNTHFKPGYHSRHWANGRR 455


>ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26b-like isoform X1 [Glycine max]
            gi|571556809|ref|XP_006604319.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26b-like isoform X2 [Glycine max]
          Length = 458

 Score =  249 bits (636), Expect = 2e-63
 Identities = 168/451 (37%), Positives = 234/451 (51%), Gaps = 35/451 (7%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAADGEEGDGS---------VKRDDVV 138
            P EFR RR  +AE+LF+  L RC GC      VGA   E+ DG           +RD V 
Sbjct: 36   PKEFRVRRDGIAERLFSCRLTRCVGCDRVELAVGADSKEKHDGDGDDDNDKSGYERDGVE 95

Query: 139  ---------KRSNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNY 291
                      + N D G  D+N   SNYS+                     RI+ +L+N 
Sbjct: 96   FEGAGASKESKVNGD-GGRDVNLGDSNYSFGEAEALSDEMEEESRYVAEILRIRDVLLNP 154

Query: 292  QDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLA 471
            +DES++VLF+SLRRLQLMEL+V+ L AT IG+AV+ +RKH SK IR L+RTLI+GWK + 
Sbjct: 155  EDESEAVLFDSLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKDIRQLSRTLIDGWKEMV 214

Query: 472  DEWVSATPAI-----PENSPDSIN---LPMEDEEGLPFPPLDEGALFATQTAPMQLSKXX 627
            DEWV AT         E +PDS+N   +  ++EEGLP PPLDEGA F TQ   M+LS   
Sbjct: 215  DEWVKATTTTAITGSEEGTPDSVNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSMELS--- 271

Query: 628  XXXXXXXPSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNP 807
                      Q +D       P+  T P  K     + P   + + E    Q        
Sbjct: 272  ----------QFFDGMDDDGNPR-PTGPFSKNRENGRKPVFDSHVVEKRKSQ-------- 312

Query: 808  EDXXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPV---SGSGKPSKLISEQKASTEA 978
                            ++    ++ N+     +   PV   SG G+P K   ++K++ E 
Sbjct: 313  -----ASHDTAIIDRDVKSQQQAKKNEAVVPERPNKPVTADSGPGRPPKSNMQRKSNMEP 367

Query: 979  KLKRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQV 1158
            K+++  +N+++ R+      DK+K S+D+ ++ KLE  KRKLQE YQQAENAK+QRTIQV
Sbjct: 368  KMQQKMENNSITRRPPTGQLDKSKRSDDSAVQVKLEATKRKLQESYQQAENAKRQRTIQV 427

Query: 1159 MELHDLPKKVVNKPQFSKSKNKIKGWANGRR 1251
            ME++DLPK+ +++    K     + WANGRR
Sbjct: 428  MEINDLPKQGLHRNTHFKPGYHNRHWANGRR 458


>gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]
          Length = 464

 Score =  248 bits (633), Expect = 5e-63
 Identities = 168/458 (36%), Positives = 235/458 (51%), Gaps = 42/458 (9%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGCVGA-----------------------ADGEEGD- 111
            P EFR RR ++AEKLF+  L +C GC                           DG+ GD 
Sbjct: 38   PKEFRLRRDRIAEKLFSCRLRKCCGCERVELSVPWDDDDNGGDDDDCDGNDDGDGDSGDR 97

Query: 112  --------GSVKRDDVVKRSNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSR 267
                    G+ K        +DD   E++N  VSN+SY                     R
Sbjct: 98   DRSGEFEAGASKESKANSSRDDDRAEEEMNH-VSNFSYLDAEALTDEIEEESQIRGEVLR 156

Query: 268  IKQILVNYQDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTL 447
            IK+IL N ++ES+SVLF  LRRLQ M L+V+ L  T IG+AV+  RKH SK+IRHLARTL
Sbjct: 157  IKEILQNREEESESVLFGELRRLQFMALTVDTLKETEIGKAVNRFRKHGSKEIRHLARTL 216

Query: 448  IEGWKVLADEWVSATPAI-----PENSPDSIN-LPMEDEEGLPFPPLDEGALFATQTAPM 609
            I+GWK + DEWV+ T AI      E +PDSIN   +++EEGLP PPLDEGA FAT+   M
Sbjct: 217  IDGWKDMVDEWVNTTAAIATMNSTEGTPDSINPSVLDEEEGLPSPPLDEGAFFATEPTSM 276

Query: 610  QLSKXXXXXXXXXPSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEW 789
            +LS+              +D       P+ +        T+ +  G    ++  +  ++ 
Sbjct: 277  ELSR-------------FFDGMDDDGNPRNS-----GAFTKNRDNGRKPSIENQNVPKQK 318

Query: 790  RCLSNPEDXXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPVS---GSGKPSKLISEQ 960
            + LS   +               +E  + Q  ++  V K   P +   G G+P ++ +EQ
Sbjct: 319  QKLSTEANVL------------TKEHKVQQQKKQEGVMKTTRPTNTDFGPGRPPRISTEQ 366

Query: 961  KASTEAKLKRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKK 1140
            K ++  K ++  D  AL+R+     QDK K S++  ++ KLE  KRKLQE YQQAENAK+
Sbjct: 367  KLNSAMKSQQKPDRPALQRRPLSVPQDKLKSSDEVAVQVKLEATKRKLQERYQQAENAKR 426

Query: 1141 QRTIQVMELHDLPKK-VVNKPQFSKSKNKIKGWANGRR 1251
            QRTIQVMELHDLPK+ + ++    K  N  + W +GRR
Sbjct: 427  QRTIQVMELHDLPKQGLGHRNPHMKPGNHNRHWGHGRR 464


>gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris]
          Length = 457

 Score =  248 bits (632), Expect = 7e-63
 Identities = 169/450 (37%), Positives = 230/450 (51%), Gaps = 34/450 (7%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGCVGAA-------DGEEGDGSVK------------- 123
            P+EFR RR  +AE+LF+  L RC GC           DG EG G  K             
Sbjct: 39   PEEFRMRRDGIAERLFSCRLSRCLGCERVELAVSVDDDGGEGGGGCKSGVDGAGAEFESE 98

Query: 124  ----RDDVVKRSNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNY 291
                ++  V  + DD   E     VSNYSY                     RIK +L+NY
Sbjct: 99   AGASKESKVNSARDDDPGEMNTNRVSNYSYGEAEALTDEIEEESQYVEEVFRIKDVLLNY 158

Query: 292  QDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLA 471
            ++ SDSVLF+SLRRLQLMEL+V++L AT IG+AV+ +RKH S  I  LARTLI+GWK + 
Sbjct: 159  EEASDSVLFDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSSDICRLARTLIDGWKEMV 218

Query: 472  DEWVSATPAI--PENSPDSIN---LPMEDEEGLPFPPLDEGALFATQTAPMQLSKXXXXX 636
            D WV AT A    E +PDS+N   +  EDEEGLP PP+DEGALFA  T  M+LS      
Sbjct: 219  DTWVKATTAFAGSEGTPDSVNPSVVEDEDEEGLPSPPMDEGALFAAPTGSMELS------ 272

Query: 637  XXXXPSIQIYDPKQKQQLPKQATIPKDKGE-TRRQAPGIAADLKEDSSRQEWRCLSNPED 813
                   Q +D       P+ +      GE  R +  G +  L   ++ +     SN  +
Sbjct: 273  -------QFFDGMDDDGNPRHS------GEFIRNRDHGRSPTLNSKNTAKRKPQASNEAN 319

Query: 814  XXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPV---SGSGKPSKLISEQKASTEAKL 984
                           +++   QA +  A  +   PV   SG G+P K   ++K+  E ++
Sbjct: 320  II------------AKDSKGQQAKKNEAAVRPNQPVIGDSGPGRPPKSTMQKKSHIEPQV 367

Query: 985  KRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVME 1164
            ++    S + +       DK + S+D  ++ KLE +KRKLQE YQQ ENAK+QRT+QVME
Sbjct: 368  QQNTVKSTIPKNPYVRQLDKPRCSDDASVQVKLEASKRKLQERYQQVENAKRQRTVQVME 427

Query: 1165 LHDLPKKVV-NKPQFSKSKNKIKGWANGRR 1251
            LHDLPK+ + ++    K  N+ K W  GRR
Sbjct: 428  LHDLPKQSIGHRNPHVKPGNQRKQWGQGRR 457


>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
            gi|222867860|gb|EEF04991.1| hypothetical protein
            POPTR_0016s03310g [Populus trichocarpa]
          Length = 474

 Score =  245 bits (626), Expect = 3e-62
 Identities = 187/484 (38%), Positives = 237/484 (48%), Gaps = 68/484 (14%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAADGEE------------GDGSVKRD 129
            P EF+ RR ++AE+LF+  L +C GC      V   D +E            GD S   D
Sbjct: 36   PKEFKLRRDRIAERLFSCRLIKCSGCNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDD 95

Query: 130  DVVK--------------------------RSND-DYGPEDLNG-IVSNYSYDXXXXXXX 225
            D  +                          R ND D G  ++N  +VSN+S+        
Sbjct: 96   DEEEVDIDIDDGGFEYEGGGSKESKVNSSNRDNDFDNGEVNVNDQLVSNFSFGEAEALTD 155

Query: 226  XXXXXXXXXXXXSRIKQILVNYQDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVR 405
                         RIK IL N QDESDSVL ESLR+L+LM L+V+ L AT IG+AV+G+R
Sbjct: 156  EIEEVSQTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLR 215

Query: 406  KHNSKQIRHLARTLIEGWKVLADEWVSATPAI--PENSPDSIN-LPMEDEEGLPFPPLDE 576
            KH SKQIRHLARTLIE WKVL DEW SA   I   E +PDS+N   +++EEGLP PPLDE
Sbjct: 216  KHGSKQIRHLARTLIEDWKVLVDEWYSAANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDE 275

Query: 577  GALFATQTAPMQLSK-----------------XXXXXXXXXPSIQIYD-PKQKQQLPKQA 702
            GA FATQ   M+LS+                          PS +  +  KQKQQ PK A
Sbjct: 276  GAFFATQPTSMELSQFFDGMDDDGNPRNNGEFIKNHVSRRRPSAENQNISKQKQQTPKGA 335

Query: 703  TIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXXXXXXXEKLRETFISQA 882
             +P    E+++              +QE                     + ++ +  S A
Sbjct: 336  NMPSKDNESQQM------------RKQE---------------------DVVKASKPSNA 362

Query: 883  NQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNSALRRKSSGPMQDKTKHSED 1062
            N            SG G+P K   EQK + E  L R  D    +RK     QDK K S++
Sbjct: 363  N------------SGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDKLKSSDE 410

Query: 1063 TLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK-VVNKPQFSKSKNKIKGWA 1239
              ++ KLE  KRKLQE YQQAE AK+QRTIQVMELHDLPK+  V K Q  +  N  + WA
Sbjct: 411  VAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLGNHNRHWA 470

Query: 1240 NGRR 1251
            +GRR
Sbjct: 471  HGRR 474


>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26b-like isoform X1 [Glycine max]
            gi|571440343|ref|XP_006575125.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26b-like isoform X2 [Glycine max]
          Length = 453

 Score =  245 bits (625), Expect = 4e-62
 Identities = 171/452 (37%), Positives = 230/452 (50%), Gaps = 36/452 (7%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGCV-----------------GAADGEEGDGS----- 117
            P EFR RR  +AE+LF+  L RC GC                  G   G +GDG      
Sbjct: 38   PKEFRLRRDGIAERLFSCRLSRCLGCERVELAVPVDDDDDGGGEGCKSGFDGDGDEFKFE 97

Query: 118  --VKRDDVVKRSNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNY 291
                ++  V  + D  G  + N  VSNYSY                     RIK I +NY
Sbjct: 98   AGASKESKVNSARDYPGEMNTNQ-VSNYSYGEAEALTDEIEKESQYVEEVFRIKDIFLNY 156

Query: 292  QDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLA 471
            ++ESDSVLF+SLRRLQLMEL+V++L AT IG+AV+ +RKH S+ I  LARTLI+GWK + 
Sbjct: 157  EEESDSVLFDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSRDICQLARTLIDGWKQMV 216

Query: 472  DEWVSATPAI--PENSPDSIN-LPMEDEEGLPFPPLDEGALFATQTAPMQLSK------X 624
            DEWV  T AI   E +PDS+N   ++DEEGLP PP+DEGALFA  T  M+LS+       
Sbjct: 217  DEWVKDTTAIAGSEGTPDSVNPSVVDDEEGLPSPPMDEGALFAAPTGSMELSQFFDGMDD 276

Query: 625  XXXXXXXXPSIQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSN 804
                      I+ ++  ++  L  Q T  K K +   +A  IA D K   +++       
Sbjct: 277  DGNPQHSGEFIKNHEHGRRPSLNSQNT-AKRKPQASNEANIIAKDSKGQQAKK------- 328

Query: 805  PEDXXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPVSGSG--KPSKLISEQKASTEA 978
                                        EAAV   +  ++ SG  +P K   ++K + E 
Sbjct: 329  ---------------------------NEAAVRPNKSVIADSGPSRPPKSTMQKKGNIEP 361

Query: 979  KLKRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQV 1158
            K+++    SA+ R       DK K S+D  +  KLE  KRKLQE YQQAE AK+QRT+QV
Sbjct: 362  KMQQNIVKSAIPRNPHIHQLDKPKCSDDAAVHVKLEATKRKLQERYQQAEKAKRQRTVQV 421

Query: 1159 MELHDLPKK-VVNKPQFSKSKNKIKGWANGRR 1251
            MELHDLPK+ + ++    K  N  + W +GRR
Sbjct: 422  MELHDLPKQGIGHRNPHVKPGNHKRQWGHGRR 453


>ref|XP_006836259.1| hypothetical protein AMTR_s00101p00137160 [Amborella trichopoda]
            gi|548838759|gb|ERM99112.1| hypothetical protein
            AMTR_s00101p00137160 [Amborella trichopoda]
          Length = 454

 Score =  245 bits (625), Expect = 4e-62
 Identities = 176/433 (40%), Positives = 225/433 (51%), Gaps = 17/433 (3%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGCVG---AADGEEGD-----GSVKRDDVVKRSNDDY 159
            P EFR RR ++AE+L+   L RC  C     A  GEE +     GS  ++  V  S+DD 
Sbjct: 36   PKEFRLRRDKIAERLYACKLIRCGECDNVTVAMPGEERESGFEGGSGGKESKVNSSSDDV 95

Query: 160  GPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESDSVLFESLRRLQ 339
               D N I SNYSYD                    RIK++L N  DES  +L+ESLRRLQ
Sbjct: 96   ---DRNRI-SNYSYDEAEALTEEIEEESEIVREVCRIKEVLSN-SDESHGLLYESLRRLQ 150

Query: 340  LMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVSATPAIPENSPD 519
            LM+LSVE L AT IG+AV+ +RKH SKQIRH+ + LI GWK L DEWV+   A+   SPD
Sbjct: 151  LMQLSVETLKATEIGKAVNALRKHQSKQIRHIVKMLINGWKDLVDEWVNTATAMTGGSPD 210

Query: 520  SINLPM---EDEEGLPFPPLDEGALFATQTAPMQLSKXXXXXXXXXPSIQIYDPKQKQQL 690
            S+   +   E+EEGLP PPLDEGA  ATQT  ++LS+               +P+   +L
Sbjct: 211  SVKPAVAEEEEEEGLPSPPLDEGAFLATQTTSIELSQFFDGMDDDG------NPRSSMEL 264

Query: 691  PKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXXXXXXXEKLRETF 870
             K     + K  +  + P       + +S+  +     PE              K  +  
Sbjct: 265  GKNPEAQR-KPNSNLRKPQEEERKPDSNSKVNYDLGRKPELVKLSKRKEEENLGKKEDHS 323

Query: 871  ISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNSALRRKSSGPMQ---D 1041
              +  +   V+KQ  P SG G+P KL  E K +    L  +Q  S        P+    D
Sbjct: 324  QIRKLEPVDVSKQNGP-SGPGRPPKLNPESKPN--GVLPMLQQRSNALGSQMRPLPNSLD 380

Query: 1042 KTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK---VVNKPQFSK 1212
            K KHSED  +R K E AKRKLQEGYQQAENAKKQRTIQVMELHDLPK    +  K    K
Sbjct: 381  KPKHSEDVSVRLKFEEAKRKLQEGYQQAENAKKQRTIQVMELHDLPKPKQGMHQKHPPPK 440

Query: 1213 SKNKIKGWANGRR 1251
            S +  + W +G R
Sbjct: 441  SGSHNRHWNSGWR 453


>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
            gi|550320725|gb|EEF04988.2| hypothetical protein
            POPTR_0016s03310g [Populus trichocarpa]
          Length = 480

 Score =  243 bits (620), Expect = 2e-61
 Identities = 187/490 (38%), Positives = 237/490 (48%), Gaps = 74/490 (15%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC------VGAADGEE------------GDGSVKRD 129
            P EF+ RR ++AE+LF+  L +C GC      V   D +E            GD S   D
Sbjct: 36   PKEFKLRRDRIAERLFSCRLIKCSGCNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDD 95

Query: 130  DVVK--------------------------RSND-DYGPEDLNG-IVSNYSYDXXXXXXX 225
            D  +                          R ND D G  ++N  +VSN+S+        
Sbjct: 96   DEEEVDIDIDDGGFEYEGGGSKESKVNSSNRDNDFDNGEVNVNDQLVSNFSFGEAEALTD 155

Query: 226  XXXXXXXXXXXXSRIKQILVNYQDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVR 405
                         RIK IL N QDESDSVL ESLR+L+LM L+V+ L AT IG+AV+G+R
Sbjct: 156  EIEEVSQTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLR 215

Query: 406  KHNSKQIRHLARTLIEGWKVLADEWVSATPAI--------PENSPDSIN-LPMEDEEGLP 558
            KH SKQIRHLARTLIE WKVL DEW SA   I         E +PDS+N   +++EEGLP
Sbjct: 216  KHGSKQIRHLARTLIEDWKVLVDEWYSAANVIRGRNLLASNEGTPDSVNPSVVDEEEGLP 275

Query: 559  FPPLDEGALFATQTAPMQLSK-----------------XXXXXXXXXPSIQIYD-PKQKQ 684
             PPLDEGA FATQ   M+LS+                          PS +  +  KQKQ
Sbjct: 276  SPPLDEGAFFATQPTSMELSQFFDGMDDDGNPRNNGEFIKNHVSRRRPSAENQNISKQKQ 335

Query: 685  QLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXXXXXXXEKLRE 864
            Q PK A +P    E+++              +QE                     + ++ 
Sbjct: 336  QTPKGANMPSKDNESQQM------------RKQE---------------------DVVKA 362

Query: 865  TFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLKRIQDNSALRRKSSGPMQDK 1044
            +  S AN            SG G+P K   EQK + E  L R  D    +RK     QDK
Sbjct: 363  SKPSNAN------------SGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDK 410

Query: 1045 TKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK-VVNKPQFSKSKN 1221
             K S++  ++ KLE  KRKLQE YQQAE AK+QRTIQVMELHDLPK+  V K Q  +  N
Sbjct: 411  LKSSDEVAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLGN 470

Query: 1222 KIKGWANGRR 1251
              + WA+GRR
Sbjct: 471  HNRHWAHGRR 480


>gb|AFK48326.1| unknown [Medicago truncatula]
          Length = 451

 Score =  243 bits (620), Expect = 2e-61
 Identities = 169/441 (38%), Positives = 230/441 (52%), Gaps = 25/441 (5%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC----VGAADGEEGDGSVKRDDV---------VKR 144
            P EF+SRR  +AE+LF+ +L RC GC    +   D + GD   KR  V         V  
Sbjct: 39   PKEFKSRRDGIAERLFSVMLNRCKGCEKVELSVPDDDNGDELCKRSSVREGASKESKVDC 98

Query: 145  SNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESDSVLFES 324
            S ++ G  D N I SNYS+                    +RIK+IL N++DESDSVLFES
Sbjct: 99   SREENGVMDANPI-SNYSFGEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFES 157

Query: 325  LRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVSATPAIP 504
            LRRLQLM+L V++L +T IG+AV+ +RKH SK IR LARTLI+GWK L + WV AT   P
Sbjct: 158  LRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTP 217

Query: 505  -----ENSPDSINLPM-----EDEEGLPFPPLDEGALFATQTAPMQLSKXXXXXXXXXPS 654
                 E +PDS N  +     E+E GLP PPLDEGA F   T  ++LS+           
Sbjct: 218  VAASEEGTPDSRNPSVVENEEEEEGGLPSPPLDEGAFFVAPTGTIELSQ---------DD 268

Query: 655  IQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXX 834
            ++ +D               D G  R+ AP    +   D+ R+        +        
Sbjct: 269  VKFFDGMD------------DDGNIRKSAP---FNKNRDNGRKPALGTQTKDKRNFPASN 313

Query: 835  XXXXXEKLRETFISQANQEAAVTKQRMPV-SGSGKPSKLISEQKASTEAKLKRIQDNSAL 1011
                  K  ++   + N+ AA   + M   +G  +P     ++KA+ E K+    +NS +
Sbjct: 314  ETAVTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKANVEPKMPPKIENSTV 373

Query: 1012 RRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK-V 1188
             ++     QDK+K S+D    AKLE  KR+LQE YQQAENAK+QRTIQVME++DLPK+  
Sbjct: 374  PKRPLNAQQDKSKCSDDL---AKLEATKRRLQESYQQAENAKRQRTIQVMEINDLPKQGS 430

Query: 1189 VNKPQFSKSKNKIKGWANGRR 1251
            V +    K  N  + W NGRR
Sbjct: 431  VQRNTHFKPGNHNRQWGNGRR 451


>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
            trichocarpa] gi|550335369|gb|EEE92397.2| transcription
            elongation factor-related family protein [Populus
            trichocarpa]
          Length = 483

 Score =  242 bits (618), Expect = 3e-61
 Identities = 178/475 (37%), Positives = 236/475 (49%), Gaps = 59/475 (12%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC--------------------------------VG 87
            P EF+ RR ++AE+LF+  L +C GC                                VG
Sbjct: 36   PKEFKFRRDRIAERLFSCRLIKCSGCNRVELAVPGHDEGVSDDGGCCSKRRDGDNSGGVG 95

Query: 88   AADGEEGDGSVKRD------------------DVVKRSND-DYGPEDLNG-IVSNYSYDX 207
              D ++ D  V  D                  +   R ND D G  ++N  +V N+SY  
Sbjct: 96   GGDDDDDDDDVDIDIDDGGFEYEGGGSKGSKVNSSNRDNDIDNGEVNVNDQLVYNFSYGD 155

Query: 208  XXXXXXXXXXXXXXXXXXSRIKQILVNYQDESDSVLFESLRRLQLMELSVEVLMATAIGR 387
                               RIK IL N QDESDSVL ESLR+L+LM L+V+ L AT IG+
Sbjct: 156  AEALTDEIEEVSQTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGK 215

Query: 388  AVSGVRKHNSKQIRHLARTLIEGWKVLADEWVSATPAI--PENSPDSIN-LPMEDEEGLP 558
            AV+ +RKH SKQIR+LARTLIE WKVL DEW S   AI   E +PDS+N   +++EEGLP
Sbjct: 216  AVNVLRKHGSKQIRYLARTLIEDWKVLVDEWYSTANAIRGDEGTPDSVNPSVVDEEEGLP 275

Query: 559  FPPLDEGALFATQTAPMQLSKXXXXXXXXXPSIQIYDPKQKQQLPKQATIPKDK-GETRR 735
             PPLDEGA FATQ   M+LS+               +  + ++  ++ ++ K    + ++
Sbjct: 276  SPPLDEGAFFATQPTSMELSQFFDGMDDDGNPRNGGEFIKNRESGQRPSVEKQNFAKQKQ 335

Query: 736  QAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXXXXXXXEKLRETFISQANQEAAV--TKQ 909
              P  A  L +D+  Q+ R                               QEA V  +K 
Sbjct: 336  HTPNGANVLSKDNKSQQMR------------------------------RQEAIVKASKP 365

Query: 910  RMPVSGSGKPSKLISEQKASTEAKLKRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEI 1089
                SG G+P     EQK + E +L R  D    +RK     QDK K+S++  ++ KLE 
Sbjct: 366  SNANSGPGRPLMQNVEQKMNQEPQLIRKTDKITSQRKPPTGQQDKLKNSDEVDVQMKLEA 425

Query: 1090 AKRKLQEGYQQAENAKKQRTIQVMELHDLPKK-VVNKPQFSKSKNKIKGWANGRR 1251
             KRKLQE YQQAENAK+QRTIQVMELHDLPK+  V K Q  +  N+ + WA+GRR
Sbjct: 426  TKRKLQERYQQAENAKRQRTIQVMELHDLPKQGYVQKNQPIRPGNQNRHWAHGRR 480


>gb|EOY08735.1| Transcription elongation factor family protein, putative isoform 2
            [Theobroma cacao]
          Length = 324

 Score =  242 bits (617), Expect = 4e-61
 Identities = 158/349 (45%), Positives = 198/349 (56%), Gaps = 20/349 (5%)
 Frame = +1

Query: 265  RIKQILVNYQDESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLART 444
            RIK+IL N QDESDSVLF+SLRRLQLM L+V++L AT IG+AV+ VRKH+SKQIRHLA+T
Sbjct: 8    RIKEILHNSQDESDSVLFDSLRRLQLMALTVDILKATGIGKAVNRVRKHSSKQIRHLAQT 67

Query: 445  LIEGWKVLADEWVSATPAIPENSPDSINLPM-------------EDEEGLPFPPLDEGAL 585
            LI+GWK L DEWV+A  AI E +P+S+N  +             E+EEGLP PPLD GA 
Sbjct: 68   LIDGWKELVDEWVNAAKAIAEGTPESVNPSVLDNEEEKEEEEEEEEEEGLPSPPLDVGAF 127

Query: 586  FATQTAPMQLSK------XXXXXXXXXPSIQIYDPKQKQQLPKQATIPKDKGETRRQAPG 747
            FATQ   M+LS+                 I+  D ++K     Q  + K K +T  +A  
Sbjct: 128  FATQPTSMELSQFFDGMDDDGNPRNSGEFIKNLDNRRKPSQENQ-NVSKRKQQTSSEAVL 186

Query: 748  IAADLKEDSSRQEWRCLSNPEDXXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPVSG 927
            +    K+D SRQ  R    P D                              K +    G
Sbjct: 187  LT---KDDKSRQMKR--QEPVDNPN--------------------------NKPQRKNMG 215

Query: 928  SGKPSKLISEQKASTEAKLKRIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQ 1107
            SG+P K   EQKA+ E+KL    D  A+ +K     QDK K S+D  ++ KLE  KRKLQ
Sbjct: 216  SGRPPKHDMEQKANFESKLLLKSDKMAVPKKPLSSQQDKFKTSDDIAVQRKLEATKRKLQ 275

Query: 1108 EGYQQAENAKKQRTIQVMELHDLPKK-VVNKPQFSKSKNKIKGWANGRR 1251
            E YQQAENAK++RTIQVMELHDLPK+  V K  + K  N  + W NGRR
Sbjct: 276  ERYQQAENAKRKRTIQVMELHDLPKQGSVPKNAYMKPGNHNRQWVNGRR 324


>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26b-like [Cucumis sativus]
          Length = 452

 Score =  242 bits (617), Expect = 4e-61
 Identities = 173/449 (38%), Positives = 232/449 (51%), Gaps = 33/449 (7%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC-------VGAADGEEGDGSVKRDDV--------- 135
            P EFR RR ++AE+LF+  L RC GC        G  DG++G+   K D V         
Sbjct: 38   PKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAG 97

Query: 136  ------VKRSNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQD 297
                  V  S DD G  + N  VSN+S+                     RIK+IL N++D
Sbjct: 98   GSKESKVYSSRDDIGEMNCNR-VSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFED 156

Query: 298  ESDSVLFESLRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADE 477
            ESD VLFESLRRL+LM LSV+ L AT IG+AV+ +RKH SK+IRHLAR LI  WK + D 
Sbjct: 157  ESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDL 216

Query: 478  WVSATPAI--PENSPDSIN----LPMED---EEGLPFPPLDEGALFATQTAPMQLSKXXX 630
            WV AT A+   E +PDS N    +  ED   EEGLP PPLDE A F TQ   M+LS    
Sbjct: 217  WVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELS---- 272

Query: 631  XXXXXXPSIQIYDPKQKQQLPKQA-TIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNP 807
                     Q +D       P+ +    K++   R+ + G         ++   RC  N 
Sbjct: 273  ---------QFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG---------NQNPTRC--NQ 312

Query: 808  EDXXXXXXXXXXXXEKLRETFISQANQEAAVTKQRMPVSGSGKPSKLISEQKASTEAKLK 987
            +              +++E  +   N+ ++ T      SG  +  KL +EQK + E   +
Sbjct: 313  QTTREVNVLSKENKTQMKEQVVKPNNKPSSNTN-----SGLLRAQKLSTEQKDNHEKFQR 367

Query: 988  RIQDNSALRRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMEL 1167
            +++  +  +R      QD  K S++  ++ KLE  KRKLQE YQQAENAKKQRTIQVMEL
Sbjct: 368  KLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMEL 423

Query: 1168 HDLPKK-VVNKPQFSKSKNKIKGWANGRR 1251
            HDLPK+ + ++    KS    + WANGRR
Sbjct: 424  HDLPKQGIGHRNPHLKSGGFNRNWANGRR 452


>ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
            gi|355499945|gb|AES81148.1| hypothetical protein
            MTR_7g089140 [Medicago truncatula]
          Length = 444

 Score =  242 bits (617), Expect = 4e-61
 Identities = 170/441 (38%), Positives = 228/441 (51%), Gaps = 25/441 (5%)
 Frame = +1

Query: 4    PDEFRSRRAQLAEKLFTALLPRCFGC----VGAADGEEGDGSVKRDDV---------VKR 144
            P EF+SRR  +AE+LF+ +L RC GC    +   D + GD   KR  V         V  
Sbjct: 36   PKEFKSRRDGIAERLFSVMLNRCKGCEKVELSVPDDDNGDELCKRSSVREGASKESKVDC 95

Query: 145  SNDDYGPEDLNGIVSNYSYDXXXXXXXXXXXXXXXXXXXSRIKQILVNYQDESDSVLFES 324
            S ++ G  D N I SNYS+                    +RIK+IL N++DESDSVLFES
Sbjct: 96   SREENGVMDANPI-SNYSFGEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFES 154

Query: 325  LRRLQLMELSVEVLMATAIGRAVSGVRKHNSKQIRHLARTLIEGWKVLADEWVSATPAIP 504
            LRRLQLM+L V++L +T IG+AV+ +RKH SK IR LARTLI+GWK L + WV AT   P
Sbjct: 155  LRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTP 214

Query: 505  -----ENSPDSINLPM-----EDEEGLPFPPLDEGALFATQTAPMQLSKXXXXXXXXXPS 654
                 E +PDS N  +     E+E GLP PPLDEGA F   T  ++LS            
Sbjct: 215  VAASEEGTPDSRNPSVVENEEEEEGGLPSPPLDEGAFFVAPTGTIELS------------ 262

Query: 655  IQIYDPKQKQQLPKQATIPKDKGETRRQAPGIAADLKEDSSRQEWRCLSNPEDXXXXXXX 834
             Q +D               D G  R+ AP    +   D+ R+        +        
Sbjct: 263  -QFFDGMD------------DDGNIRKSAP---FNKNRDNGRKPALGTQTKDKRNFPASN 306

Query: 835  XXXXXEKLRETFISQANQEAAVTKQRMPV-SGSGKPSKLISEQKASTEAKLKRIQDNSAL 1011
                  K  ++   + N+ AA   + M   +G  +P     ++KA+ E K+    +NS +
Sbjct: 307  ETAVTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKANVEPKMPPKIENSTV 366

Query: 1012 RRKSSGPMQDKTKHSEDTLIRAKLEIAKRKLQEGYQQAENAKKQRTIQVMELHDLPKK-V 1188
             ++     QDK+K S+D    AKLE  KR+LQE YQQAENAK+QRTIQVME++DLPK+  
Sbjct: 367  PKRPLNAQQDKSKCSDDL---AKLEATKRRLQESYQQAENAKRQRTIQVMEINDLPKQGS 423

Query: 1189 VNKPQFSKSKNKIKGWANGRR 1251
            V +    K  N  + W NGRR
Sbjct: 424  VQRNTHFKPGNHNRQWGNGRR 444