BLASTX nr result
ID: Zingiber25_contig00006232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00006232
(1118 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN28868.1| unknown [Zea mays] 167 9e-39
gb|ACG40041.1| cell wall integrity protein scw1 [Zea mays] gi|19... 167 9e-39
ref|NP_001149394.1| LOC100283020 [Zea mays] gi|195626938|gb|ACG3... 167 9e-39
ref|XP_002445300.1| hypothetical protein SORBIDRAFT_07g008520 [S... 166 1e-38
ref|XP_006659971.1| PREDICTED: cell wall integrity protein scw1-... 162 2e-37
ref|XP_004973090.1| PREDICTED: cell wall integrity protein scw1-... 162 3e-37
ref|XP_003573610.1| PREDICTED: uncharacterized protein LOC100829... 159 1e-36
ref|XP_003531769.1| PREDICTED: U1 small nuclear ribonucleoprotei... 157 1e-35
ref|XP_003529515.1| PREDICTED: RNA-binding protein mde7-like [Gl... 157 1e-35
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei... 156 1e-35
ref|XP_002311913.2| hypothetical protein POPTR_0008s00980g [Popu... 155 2e-35
gb|EOY25714.1| RNA-binding family protein [Theobroma cacao] 155 2e-35
ref|XP_004507531.1| PREDICTED: RNA-binding protein with multiple... 155 3e-35
gb|AFW60943.1| hypothetical protein ZEAMMB73_771004 [Zea mays] 155 3e-35
gb|ACF88320.1| unknown [Zea mays] 155 3e-35
emb|CAD33925.1| proline rich protein 3 [Cicer arietinum] 155 3e-35
ref|XP_002525006.1| RNA-binding protein with multiple splicing, ... 155 4e-35
ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-... 154 8e-35
ref|XP_006378851.1| hypothetical protein POPTR_0010s25610g [Popu... 153 1e-34
ref|XP_006492013.1| PREDICTED: cell wall integrity protein scw1-... 152 2e-34
>gb|ACN28868.1| unknown [Zea mays]
Length = 234
Score = 167 bits (422), Expect = 9e-39
Identities = 80/105 (76%), Positives = 90/105 (85%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQNTKDNPPCNTLFIGNLG ++LFSVQ GFKQMK+LRQ+RNTVCFIEFED
Sbjct: 122 YAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFED 181
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V +A +VHQ LQGA++ SSGRGGMRIQFSKNPFGRRKDSA G ++
Sbjct: 182 VNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSAAGLAS 226
>gb|ACG40041.1| cell wall integrity protein scw1 [Zea mays]
gi|195642380|gb|ACG40658.1| cell wall integrity protein
scw1 [Zea mays]
Length = 321
Score = 167 bits (422), Expect = 9e-39
Identities = 80/105 (76%), Positives = 90/105 (85%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQNTKDNPPCNTLFIGNLG ++LFSVQ GFKQMK+LRQ+RNTVCFIEFED
Sbjct: 209 YAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFED 268
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V +A +VHQ LQGA++ SSGRGGMRIQFSKNPFGRRKDSA G ++
Sbjct: 269 VNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSAAGLAS 313
>ref|NP_001149394.1| LOC100283020 [Zea mays] gi|195626938|gb|ACG35299.1| cell wall
integrity protein scw1 [Zea mays]
gi|413921012|gb|AFW60944.1| cell wall integrity protein
scw1 [Zea mays]
Length = 321
Score = 167 bits (422), Expect = 9e-39
Identities = 80/105 (76%), Positives = 90/105 (85%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQNTKDNPPCNTLFIGNLG ++LFSVQ GFKQMK+LRQ+RNTVCFIEFED
Sbjct: 209 YAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFED 268
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V +A +VHQ LQGA++ SSGRGGMRIQFSKNPFGRRKDSA G ++
Sbjct: 269 VNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSAAGLAS 313
>ref|XP_002445300.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
gi|241941650|gb|EES14795.1| hypothetical protein
SORBIDRAFT_07g008520 [Sorghum bicolor]
Length = 320
Score = 166 bits (421), Expect = 1e-38
Identities = 79/105 (75%), Positives = 90/105 (85%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQNTKDNPPCNTLFIGNLG ++LFSVQ G+KQMK+LRQ+RNTVCFIEFED
Sbjct: 208 YAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFED 267
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V +A +VHQ LQGA++ SSGRGGMRIQFSKNPFGRRKDSA G ++
Sbjct: 268 VNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSAGGLAS 312
>ref|XP_006659971.1| PREDICTED: cell wall integrity protein scw1-like [Oryza
brachyantha]
Length = 319
Score = 162 bits (411), Expect = 2e-37
Identities = 77/102 (75%), Positives = 86/102 (84%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQNTKDNPPCNTLFIGNLG ++LFSVQ G+KQMK+LRQ+RNTVCFIEFED
Sbjct: 207 YAPVQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFED 266
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANG 382
V +A VH NLQGA++ SSGRGGMRIQFSKNP+GRRKDS G
Sbjct: 267 VNAASAVHHNLQGAVIPSSGRGGMRIQFSKNPYGRRKDSIGG 308
>ref|XP_004973090.1| PREDICTED: cell wall integrity protein scw1-like [Setaria italica]
Length = 322
Score = 162 bits (409), Expect = 3e-37
Identities = 77/104 (74%), Positives = 86/104 (82%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQNTKDNPPCNTLFIGNLG ++LFSVQ G+KQMK+LRQ+RNTVCFIEFED
Sbjct: 210 YAPVQNTKDNPPCNTLFIGNLGETVVEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFED 269
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGAS 388
V +A VH LQGA++ SSGRGGMRIQFSKNPFGRRKDS G +
Sbjct: 270 VNAATAVHHTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSVGGVA 313
>ref|XP_003573610.1| PREDICTED: uncharacterized protein LOC100829014 [Brachypodium
distachyon]
Length = 317
Score = 159 bits (403), Expect = 1e-36
Identities = 76/102 (74%), Positives = 83/102 (81%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMK+LRQ+RNTVCFIEF+D
Sbjct: 205 YAPVQNTKDNPPCNTLFIGNLGETVVEEELRGLFSVQPGFKQMKVLRQDRNTVCFIEFDD 264
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANG 382
V +A VH LQGA++ SSGRGGMRIQFSKNPFGRRKD G
Sbjct: 265 VSAASAVHHTLQGAVIPSSGRGGMRIQFSKNPFGRRKDLVGG 306
>ref|XP_003531769.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Glycine max]
Length = 318
Score = 157 bits (396), Expect = 1e-35
Identities = 80/110 (72%), Positives = 86/110 (78%), Gaps = 7/110 (6%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 202 YVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFED 261
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKD-------SANGA 385
V SA NVH NLQGA++ SSG GMRIQ+SKNPFG+RKD SANGA
Sbjct: 262 VNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDNLPVAVPSANGA 311
>ref|XP_003529515.1| PREDICTED: RNA-binding protein mde7-like [Glycine max]
Length = 320
Score = 157 bits (396), Expect = 1e-35
Identities = 80/110 (72%), Positives = 86/110 (78%), Gaps = 7/110 (6%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 204 YVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFED 263
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKD-------SANGA 385
V SA NVH NLQGA++ SSG GMRIQ+SKNPFG+RKD SANGA
Sbjct: 264 VNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDNLPIAVPSANGA 313
>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
small nuclear ribonucleoprotein A-like [Cucumis sativus]
Length = 335
Score = 156 bits (395), Expect = 1e-35
Identities = 77/105 (73%), Positives = 85/105 (80%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 218 YVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFED 277
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V +A NVH +LQGA++ SSG GMRIQFSKNPFG+RKD+A SA
Sbjct: 278 VNNATNVHHSLQGAVIPSSGSVGMRIQFSKNPFGKRKDAAYPVSA 322
>ref|XP_002311913.2| hypothetical protein POPTR_0008s00980g [Populus trichocarpa]
gi|550332106|gb|EEE89280.2| hypothetical protein
POPTR_0008s00980g [Populus trichocarpa]
Length = 331
Score = 155 bits (393), Expect = 2e-35
Identities = 79/112 (70%), Positives = 87/112 (77%), Gaps = 8/112 (7%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y P+QNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 214 YVPIQNTKDNPPCNTLFIGNLGQNINEDELRGLFSVQPGFKQMKILRQERHTVCFIEFED 273
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKD--------SANGAS 388
+ SA NVH +LQGA++ SSG GMRIQ+SKNPFGRRKD SANGAS
Sbjct: 274 LNSATNVHHSLQGAVIPSSGSIGMRIQYSKNPFGRRKDGIHHVASHSANGAS 325
>gb|EOY25714.1| RNA-binding family protein [Theobroma cacao]
Length = 328
Score = 155 bits (393), Expect = 2e-35
Identities = 75/101 (74%), Positives = 83/101 (82%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 211 YVPVQNTKDNPPCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFED 270
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSAN 379
V +A NVH NLQGA++ SSG GMRIQ+SKNPFG+RKDS +
Sbjct: 271 VNTATNVHHNLQGAVIPSSGSVGMRIQYSKNPFGKRKDSGH 311
>ref|XP_004507531.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
isoform X1 [Cicer arietinum]
Length = 315
Score = 155 bits (392), Expect = 3e-35
Identities = 79/111 (71%), Positives = 85/111 (76%), Gaps = 8/111 (7%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 198 YVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFED 257
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKD--------SANGA 385
V SA NVH NLQGA++ SSG GMRIQ+SKNPFG+RKD ANGA
Sbjct: 258 VNSATNVHHNLQGAVIPSSGSVGMRIQYSKNPFGKRKDGNFPMAVPGANGA 308
>gb|AFW60943.1| hypothetical protein ZEAMMB73_771004 [Zea mays]
Length = 318
Score = 155 bits (392), Expect = 3e-35
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQ DNPPCNTLFIGNLG ++LFSVQ GFKQMK+LRQ+RNTVCFIEFED
Sbjct: 209 YAPVQ---DNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFED 265
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V +A +VHQ LQGA++ SSGRGGMRIQFSKNPFGRRKDSA G ++
Sbjct: 266 VNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSAAGLAS 310
>gb|ACF88320.1| unknown [Zea mays]
Length = 231
Score = 155 bits (392), Expect = 3e-35
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
YAPVQ DNPPCNTLFIGNLG ++LFSVQ GFKQMK+LRQ+RNTVCFIEFED
Sbjct: 122 YAPVQ---DNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFED 178
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V +A +VHQ LQGA++ SSGRGGMRIQFSKNPFGRRKDSA G ++
Sbjct: 179 VNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSAAGLAS 223
>emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 155 bits (392), Expect = 3e-35
Identities = 79/111 (71%), Positives = 85/111 (76%), Gaps = 8/111 (7%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 167 YVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFED 226
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKD--------SANGA 385
V SA NVH NLQGA++ SSG GMRIQ+SKNPFG+RKD ANGA
Sbjct: 227 VNSATNVHHNLQGAVIPSSGSVGMRIQYSKNPFGKRKDGNFPMAVPGANGA 277
>ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis] gi|223535714|gb|EEF37378.1| RNA-binding
protein with multiple splicing, putative [Ricinus
communis]
Length = 337
Score = 155 bits (391), Expect = 4e-35
Identities = 78/111 (70%), Positives = 87/111 (78%), Gaps = 8/111 (7%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMK+LRQER+TVCFIEFED
Sbjct: 220 YLPVQNTKDNPPCNTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFED 279
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKD--------SANGA 385
V SA NVH++LQGA++ SSG GMRIQ+SKNPFG+RKD SANGA
Sbjct: 280 VNSASNVHRSLQGAVIPSSGSVGMRIQYSKNPFGKRKDGSHSVASPSANGA 330
>ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 154 bits (388), Expect = 8e-35
Identities = 78/113 (69%), Positives = 87/113 (76%), Gaps = 8/113 (7%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMKILRQER+TVCFIEFED
Sbjct: 211 YVPVQNTKDNPPCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFED 270
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDS--------ANGASA 391
+ +A NVH +LQGA++ SSG GMRIQ+SKNPFG+RKDS ANGA A
Sbjct: 271 MNTATNVHHSLQGAVIPSSGSVGMRIQYSKNPFGKRKDSGHPVAVAGANGAPA 323
>ref|XP_006378851.1| hypothetical protein POPTR_0010s25610g [Populus trichocarpa]
gi|550330598|gb|ERP56648.1| hypothetical protein
POPTR_0010s25610g [Populus trichocarpa]
Length = 334
Score = 153 bits (386), Expect = 1e-34
Identities = 77/111 (69%), Positives = 85/111 (76%), Gaps = 8/111 (7%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFSVQ GFKQMK+LRQER+TVCFIEFED
Sbjct: 217 YVPVQNTKDNPPCNTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFED 276
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKD--------SANGA 385
+ SA NVH LQGA++ SSG GMRIQ+SKNPFG+RKD SANGA
Sbjct: 277 LNSATNVHHTLQGAVIPSSGSVGMRIQYSKNPFGKRKDGIHHVASPSANGA 327
>ref|XP_006492013.1| PREDICTED: cell wall integrity protein scw1-like [Citrus sinensis]
Length = 328
Score = 152 bits (385), Expect = 2e-34
Identities = 72/105 (68%), Positives = 84/105 (80%)
Frame = +2
Query: 77 YAPVQNTKDNPPCNTLFIGNLGXXXXXXXXKALFSVQSGFKQMKILRQERNTVCFIEFED 256
Y PVQNTKDNPPCNTLFIGNLG + LFS Q GFKQMK+LRQER+TVCFIEFED
Sbjct: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
Query: 257 VVSAKNVHQNLQGALLASSGRGGMRIQFSKNPFGRRKDSANGASA 391
V SA +VH NLQGA++ SSG GMRIQ+SKNPFG+RKD ++ ++
Sbjct: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQYSKNPFGKRKDGSHAIAS 315