BLASTX nr result
ID: Zingiber25_contig00006231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00006231
(346 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu... 162 4e-38
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 159 3e-37
ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocar... 153 2e-35
ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [A... 153 2e-35
ref|XP_002328352.1| predicted protein [Populus trichocarpa] gi|5... 153 2e-35
gb|ABK93399.1| unknown [Populus trichocarpa] 153 2e-35
ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [A... 151 8e-35
gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao] 149 3e-34
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ... 148 8e-34
gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indi... 147 1e-33
ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [C... 146 2e-33
gb|AFK33413.1| unknown [Lotus japonicus] 146 3e-33
gb|EOY05762.1| Ribosomal protein S3Ae isoform 2 [Theobroma cacao] 145 4e-33
gb|EOY05761.1| Ribosomal protein S3Ae isoform 1 [Theobroma cacao] 145 4e-33
ref|XP_003610736.1| 40S ribosomal protein S3a-like protein [Medi... 145 4e-33
gb|EXB39197.1| 40S ribosomal protein S3a [Morus notabilis] 145 7e-33
ref|XP_004241461.1| PREDICTED: 40S ribosomal protein S3a-like [S... 145 7e-33
ref|NP_001275123.1| cyc07-like protein [Solanum tuberosum] gi|82... 145 7e-33
gb|ABB72808.1| cyc07-like protein [Solanum tuberosum] 145 7e-33
gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB... 145 7e-33
>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 162 bits (410), Expect = 4e-38
Identities = 80/87 (91%), Positives = 84/87 (96%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLKDLVQKFIPEVIGKEIEKATTSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QAASCDLKDLVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
YKEDVGVK+DRPA+DV MEGE EVV A
Sbjct: 235 YKEDVGVKIDRPADDVPMEGEPEVVGA 261
>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 159 bits (403), Expect = 3e-37
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LVQKFIPEVIGKEIEKATTSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
YKED GVKLDRP EDV +EGE+EVV A
Sbjct: 235 YKEDFGVKLDRPGEDVPVEGEAEVVGA 261
>ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocarpa]
gi|550338141|gb|ERP60570.1| 40S ribosomal protein S3A
[Populus trichocarpa]
Length = 261
Score = 153 bits (387), Expect = 2e-35
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLKDLVQKFIPEVIGKEIEKATT I+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y +D+GVK+DRPA++ EGE+EVV A
Sbjct: 235 YSQDIGVKIDRPADETVAEGETEVVGA 261
>ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [Amborella trichopoda]
gi|548841496|gb|ERN01559.1| hypothetical protein
AMTR_s00002p00271660 [Amborella trichopoda]
Length = 265
Score = 153 bits (387), Expect = 2e-35
Identities = 74/86 (86%), Positives = 83/86 (96%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLK+LVQKFIPEVIGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 180 QATSCDLKELVQKFIPEVIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 239
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVA 87
Y +DVGVK++RPAEDV M+GE+EV A
Sbjct: 240 YSDDVGVKVERPAEDVAMDGETEVAA 265
>ref|XP_002328352.1| predicted protein [Populus trichocarpa]
gi|566169607|ref|XP_006382772.1| hypothetical protein
POPTR_0005s05280g [Populus trichocarpa]
gi|550338140|gb|ERP60569.1| hypothetical protein
POPTR_0005s05280g [Populus trichocarpa]
Length = 265
Score = 153 bits (387), Expect = 2e-35
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLKDLVQKFIPEVIGKEIEKATT I+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 179 QASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 238
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y +D+GVK+DRPA++ EGE+EVV A
Sbjct: 239 YSQDIGVKIDRPADETVAEGETEVVGA 265
>gb|ABK93399.1| unknown [Populus trichocarpa]
Length = 261
Score = 153 bits (387), Expect = 2e-35
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLKDLVQKFIPEVIGKEIEKATT I+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y +D+GVK+DRPA++ EGE+EVV A
Sbjct: 235 YSQDIGVKIDRPADETVAEGETEVVGA 261
>ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [Amborella trichopoda]
gi|548852191|gb|ERN10339.1| hypothetical protein
AMTR_s00026p00042160 [Amborella trichopoda]
Length = 261
Score = 151 bits (382), Expect = 8e-35
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLK+LVQKFIPEVIGKEIEK T SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKELVQKFIPEVIGKEIEKVTMSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y +DVGVK+DRPAEDV +EG +EVV A
Sbjct: 235 YSDDVGVKVDRPAEDVPLEGVTEVVGA 261
>gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao]
Length = 261
Score = 149 bits (377), Expect = 3e-34
Identities = 73/87 (83%), Positives = 81/87 (93%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV KFIPEVIG+EIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKL+RPA++ EGE+EVV A
Sbjct: 235 YSEDVGVKLERPADETTAEGETEVVGA 261
>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 148 bits (373), Expect = 8e-34
Identities = 72/87 (82%), Positives = 80/87 (91%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV KFIPE IG+EIEKAT+SIFPLQNVFIRKVKILKAPKFD+GKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKL+RP E+ +EGE+EVV A
Sbjct: 235 YSEDVGVKLERPIEETMVEGETEVVGA 261
>gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indica Group]
Length = 818
Score = 147 bits (371), Expect = 1e-33
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV KFIPEVIGKEIEKAT+SIFPLQNVF+RKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVV 90
YKEDVG KL+RPAED +E +S ++
Sbjct: 235 YKEDVGTKLERPAEDEVVERDSSII 259
>ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449518719|ref|XP_004166384.1| PREDICTED: 40S
ribosomal protein S3a-like [Cucumis sativus]
Length = 261
Score = 146 bits (369), Expect = 2e-33
Identities = 71/87 (81%), Positives = 81/87 (93%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV+KFIPE IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVK++RPA++ +EG +EVV A
Sbjct: 235 YSEDVGVKVERPADETAVEGATEVVGA 261
>gb|AFK33413.1| unknown [Lotus japonicus]
Length = 261
Score = 146 bits (368), Expect = 3e-33
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLK+LV+KFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVG K+DRPA++ +EG +EVV A
Sbjct: 235 YSEDVGTKVDRPADETVVEGATEVVGA 261
>gb|EOY05762.1| Ribosomal protein S3Ae isoform 2 [Theobroma cacao]
Length = 246
Score = 145 bits (367), Expect = 4e-33
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLK+LVQKFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 160 QATSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 219
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKL+RPA++ E +EVV A
Sbjct: 220 YGEDVGVKLERPADETMAEATTEVVGA 246
>gb|EOY05761.1| Ribosomal protein S3Ae isoform 1 [Theobroma cacao]
Length = 262
Score = 145 bits (367), Expect = 4e-33
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLK+LVQKFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 176 QATSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 235
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKL+RPA++ E +EVV A
Sbjct: 236 YGEDVGVKLERPADETMAEATTEVVGA 262
>ref|XP_003610736.1| 40S ribosomal protein S3a-like protein [Medicago truncatula]
gi|355512071|gb|AES93694.1| 40S ribosomal protein
S3a-like protein [Medicago truncatula]
Length = 261
Score = 145 bits (367), Expect = 4e-33
Identities = 69/87 (79%), Positives = 80/87 (91%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLKDLV+KFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVG K++RPA++ +EG E+V A
Sbjct: 235 YSEDVGTKVERPADETMVEGTPEIVGA 261
>gb|EXB39197.1| 40S ribosomal protein S3a [Morus notabilis]
Length = 262
Score = 145 bits (365), Expect = 7e-33
Identities = 72/88 (81%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QA+SCDLKDLV KFIPE+IG+EIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKDLVNKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGE-SEVVAA 84
Y EDVGVK+DRPA++ +EGE +EVV A
Sbjct: 235 YSEDVGVKVDRPADETIVEGEVTEVVGA 262
>ref|XP_004241461.1| PREDICTED: 40S ribosomal protein S3a-like [Solanum lycopersicum]
Length = 261
Score = 145 bits (365), Expect = 7e-33
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV KFIPE IG+EIEKAT+SIFPLQNV+IRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKLDRPAE+ E E+EV A
Sbjct: 235 YSEDVGVKLDRPAEETVAEAETEVPGA 261
>ref|NP_001275123.1| cyc07-like protein [Solanum tuberosum] gi|82623437|gb|ABB87133.1|
40S ribosomal protein S3a-like [Solanum tuberosum]
Length = 261
Score = 145 bits (365), Expect = 7e-33
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV KFIPE IG+EIEKAT+SIFPLQNV+IRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKLDRPAE+ E E+EV A
Sbjct: 235 YSEDVGVKLDRPAEETVAEAEAEVPGA 261
>gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]
Length = 260
Score = 145 bits (365), Expect = 7e-33
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV KFIPE IG+EIEKAT+SIFPLQNV+IRKVKILKAPKFDLGKLMEVHGD
Sbjct: 174 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 233
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKLDRPAE+ E E+EV A
Sbjct: 234 YSEDVGVKLDRPAEETVAEAEAEVPGA 260
>gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB72815.1|
cyc07-like protein [Solanum tuberosum]
Length = 261
Score = 145 bits (365), Expect = 7e-33
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = -3
Query: 344 QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 165
QASSCDLK+LV KFIPE IG+EIEKAT+SIFPLQNV+IRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 234
Query: 164 YKEDVGVKLDRPAEDVQMEGESEVVAA 84
Y EDVGVKLDRPAE+ E E+EV A
Sbjct: 235 YSEDVGVKLDRPAEETVAEAEAEVPGA 261