BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00006230
         (346 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu...   159   3e-37
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]                       157   2e-36
ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocar...   150   1e-34
ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [A...   150   1e-34
ref|XP_002328352.1| predicted protein [Populus trichocarpa] gi|5...   150   1e-34
gb|ABK93399.1| unknown [Populus trichocarpa]                          150   1e-34
ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [A...   149   5e-34
gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao]               147   2e-33
gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indi...   145   4e-33
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ...   145   5e-33
ref|NP_001049289.1| Os03g0200500 [Oryza sativa Japonica Group] g...   144   9e-33
gb|ABR26074.1| 40S ribosomal protein S3a [Oryza sativa Indica Gr...   144   9e-33
ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [C...   144   2e-32
ref|NP_001066631.1| Os12g0406200 [Oryza sativa Japonica Group] g...   144   2e-32
gb|AFK33413.1| unknown [Lotus japonicus]                              143   2e-32
gb|EOY05762.1| Ribosomal protein S3Ae isoform 2 [Theobroma cacao]     143   3e-32
gb|EOY05761.1| Ribosomal protein S3Ae isoform 1 [Theobroma cacao]     143   3e-32
ref|XP_003610736.1| 40S ribosomal protein S3a-like protein [Medi...   143   3e-32
gb|EXB39197.1| 40S ribosomal protein S3a [Morus notabilis]            142   3e-32
gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japo...   142   3e-32

>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
          Length = 261

 Score =  159 bits (403), Expect = 3e-37
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLKDLVQKFIPEVIGKEIEKATTSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QAASCDLKDLVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           YKEDVGVK+DRPA+DV MEGE + V A
Sbjct: 235 YKEDVGVKIDRPADDVPMEGEPEVVGA 261


>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
          Length = 261

 Score =  157 bits (396), Expect = 2e-36
 Identities = 77/87 (88%), Positives = 82/87 (94%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LVQKFIPEVIGKEIEKATTSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           YKED GVKLDRP EDV +EGE++ V A
Sbjct: 235 YKEDFGVKLDRPGEDVPVEGEAEVVGA 261


>ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocarpa]
           gi|550338141|gb|ERP60570.1| 40S ribosomal protein S3A
           [Populus trichocarpa]
          Length = 261

 Score =  150 bits (380), Expect = 1e-34
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLKDLVQKFIPEVIGKEIEKATT I+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y +D+GVK+DRPA++   EGE++ V A
Sbjct: 235 YSQDIGVKIDRPADETVAEGETEVVGA 261


>ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [Amborella trichopoda]
           gi|548841496|gb|ERN01559.1| hypothetical protein
           AMTR_s00002p00271660 [Amborella trichopoda]
          Length = 265

 Score =  150 bits (380), Expect = 1e-34
 Identities = 72/86 (83%), Positives = 82/86 (95%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLK+LVQKFIPEVIGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 180 QATSCDLKELVQKFIPEVIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 239

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVA 260
           Y +DVGVK++RPAEDV M+GE++  A
Sbjct: 240 YSDDVGVKVERPAEDVAMDGETEVAA 265


>ref|XP_002328352.1| predicted protein [Populus trichocarpa]
           gi|566169607|ref|XP_006382772.1| hypothetical protein
           POPTR_0005s05280g [Populus trichocarpa]
           gi|550338140|gb|ERP60569.1| hypothetical protein
           POPTR_0005s05280g [Populus trichocarpa]
          Length = 265

 Score =  150 bits (380), Expect = 1e-34
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLKDLVQKFIPEVIGKEIEKATT I+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 179 QASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 238

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y +D+GVK+DRPA++   EGE++ V A
Sbjct: 239 YSQDIGVKIDRPADETVAEGETEVVGA 265


>gb|ABK93399.1| unknown [Populus trichocarpa]
          Length = 261

 Score =  150 bits (380), Expect = 1e-34
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLKDLVQKFIPEVIGKEIEKATT I+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y +D+GVK+DRPA++   EGE++ V A
Sbjct: 235 YSQDIGVKIDRPADETVAEGETEVVGA 261


>ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [Amborella trichopoda]
           gi|548852191|gb|ERN10339.1| hypothetical protein
           AMTR_s00026p00042160 [Amborella trichopoda]
          Length = 261

 Score =  149 bits (375), Expect = 5e-34
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLK+LVQKFIPEVIGKEIEK T SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKELVQKFIPEVIGKEIEKVTMSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y +DVGVK+DRPAEDV +EG ++ V A
Sbjct: 235 YSDDVGVKVDRPAEDVPLEGVTEVVGA 261


>gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao]
          Length = 261

 Score =  147 bits (370), Expect = 2e-33
 Identities = 71/87 (81%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV KFIPEVIG+EIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y EDVGVKL+RPA++   EGE++ V A
Sbjct: 235 YSEDVGVKLERPADETTAEGETEVVGA 261


>gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indica Group]
          Length = 818

 Score =  145 bits (367), Expect = 4e-33
 Identities = 71/85 (83%), Positives = 78/85 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV KFIPEVIGKEIEKAT+SIFPLQNVF+RKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAV 257
           YKEDVG KL+RPAED  +E +S  +
Sbjct: 235 YKEDVGTKLERPAEDEVVERDSSII 259


>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
           cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
          Length = 261

 Score =  145 bits (366), Expect = 5e-33
 Identities = 70/87 (80%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV KFIPE IG+EIEKAT+SIFPLQNVFIRKVKILKAPKFD+GKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y EDVGVKL+RP E+  +EGE++ V A
Sbjct: 235 YSEDVGVKLERPIEETMVEGETEVVGA 261


>ref|NP_001049289.1| Os03g0200500 [Oryza sativa Japonica Group]
           gi|1350986|sp|P49397.2|RS3A_ORYSJ RecName: Full=40S
           ribosomal protein S3a; AltName: Full=CYC07 protein
           gi|582044884|pdb|3J60|B Chain B, Localization Of The
           Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
           Map Of Triticum Aestivum Translating 80s Ribosome
           gi|483431|dbj|BAA05059.1| cyc07 [Oryza sativa]
           gi|108706696|gb|ABF94491.1| 40S ribosomal protein S3a,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113547760|dbj|BAF11203.1| Os03g0200500 [Oryza sativa
           Japonica Group] gi|125542785|gb|EAY88924.1| hypothetical
           protein OsI_10409 [Oryza sativa Indica Group]
           gi|125585284|gb|EAZ25948.1| hypothetical protein
           OsJ_09804 [Oryza sativa Japonica Group]
           gi|215697346|dbj|BAG91340.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737408|dbj|BAG96538.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 262

 Score =  144 bits (364), Expect = 9e-33
 Identities = 73/87 (83%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV KFIPEVIGKEIEKAT+SIFPLQNVF+RKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 Y-KEDVGVKLDRPAEDVQMEGESDAVA 260
           Y KED+G KLDRPAED  M G+  A A
Sbjct: 235 YAKEDIGTKLDRPAEDEAMAGQEVAAA 261


>gb|ABR26074.1| 40S ribosomal protein S3a [Oryza sativa Indica Group]
          Length = 88

 Score =  144 bits (364), Expect = 9e-33
 Identities = 73/87 (83%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV KFIPEVIGKEIEKAT+SIFPLQNVF+RKVKILKAPKFDLGKLMEVHGD
Sbjct: 1   QASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 60

Query: 183 Y-KEDVGVKLDRPAEDVQMEGESDAVA 260
           Y KED+G KLDRPAED  M G+  A A
Sbjct: 61  YAKEDIGTKLDRPAEDEAMAGQEVAAA 87


>ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
           gi|449518719|ref|XP_004166384.1| PREDICTED: 40S
           ribosomal protein S3a-like [Cucumis sativus]
          Length = 261

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/87 (79%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV+KFIPE IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y EDVGVK++RPA++  +EG ++ V A
Sbjct: 235 YSEDVGVKVERPADETAVEGATEVVGA 261


>ref|NP_001066631.1| Os12g0406200 [Oryza sativa Japonica Group]
           gi|108862547|gb|ABG21991.1| 40S ribosomal protein S3a,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649138|dbj|BAF29650.1| Os12g0406200 [Oryza sativa
           Japonica Group]
          Length = 260

 Score =  144 bits (362), Expect = 2e-32
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV KFIPEVIGKEIEKAT+SIFPLQNVF+RKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGE 245
           YKEDVG KL+RPAED  + G+
Sbjct: 235 YKEDVGTKLERPAEDEVVVGQ 255


>gb|AFK33413.1| unknown [Lotus japonicus]
          Length = 261

 Score =  143 bits (361), Expect = 2e-32
 Identities = 68/87 (78%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLK+LV+KFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y EDVG K+DRPA++  +EG ++ V A
Sbjct: 235 YSEDVGTKVDRPADETVVEGATEVVGA 261


>gb|EOY05762.1| Ribosomal protein S3Ae isoform 2 [Theobroma cacao]
          Length = 246

 Score =  143 bits (360), Expect = 3e-32
 Identities = 69/87 (79%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLK+LVQKFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 160 QATSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 219

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y EDVGVKL+RPA++   E  ++ V A
Sbjct: 220 YGEDVGVKLERPADETMAEATTEVVGA 246


>gb|EOY05761.1| Ribosomal protein S3Ae isoform 1 [Theobroma cacao]
          Length = 262

 Score =  143 bits (360), Expect = 3e-32
 Identities = 69/87 (79%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLK+LVQKFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 176 QATSCDLKELVQKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 235

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y EDVGVKL+RPA++   E  ++ V A
Sbjct: 236 YGEDVGVKLERPADETMAEATTEVVGA 262


>ref|XP_003610736.1| 40S ribosomal protein S3a-like protein [Medicago truncatula]
           gi|355512071|gb|AES93694.1| 40S ribosomal protein
           S3a-like protein [Medicago truncatula]
          Length = 261

 Score =  143 bits (360), Expect = 3e-32
 Identities = 68/87 (78%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLKDLV+KFIPE+IGKEIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGESDAVAA 263
           Y EDVG K++RPA++  +EG  + V A
Sbjct: 235 YSEDVGTKVERPADETMVEGTPEIVGA 261


>gb|EXB39197.1| 40S ribosomal protein S3a [Morus notabilis]
          Length = 262

 Score =  142 bits (359), Expect = 3e-32
 Identities = 68/81 (83%), Positives = 77/81 (95%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QA+SCDLKDLV KFIPE+IG+EIEKAT+SI+PLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QATSCDLKDLVNKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAEDVQMEGE 245
           Y EDVGVK+DRPA++  +EGE
Sbjct: 235 YSEDVGVKVDRPADETIVEGE 255


>gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
          Length = 764

 Score =  142 bits (359), Expect = 3e-32
 Identities = 69/75 (92%), Positives = 73/75 (97%)
 Frame = +3

Query: 3   QASSCDLKDLVQKFIPEVIGKEIEKATTSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
           QASSCDLK+LV KFIPEVIGKEIEKAT+SIFPLQNVF+RKVKILKAPKFDLGKLMEVHGD
Sbjct: 175 QASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 234

Query: 183 YKEDVGVKLDRPAED 227
           YKEDVG KL+RPAED
Sbjct: 235 YKEDVGTKLERPAED 249