BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00006156
         (378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma...    68   1e-09
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07

>gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma cacao]
          Length = 395

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 42/58 (72%)
 Frame = -1

Query: 201 TISAVKRAILSESDPDRIADLFQSAAHLPRFYAHRPIFSLTVDKLARAKRPDLVDRLL 28
           +  A K AI+SE +P+++A++FQ   HLP F  HRPI+ L++ KLARA R DLVD LL
Sbjct: 30  SFKAAKSAIISEKNPEKLAEIFQQCLHLPTFLRHRPIYHLSIRKLARANRLDLVDSLL 87


>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449494815|ref|XP_004159654.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = -1

Query: 201 TISAVKRAILSESDPDRIADLFQSAAHLPRFYAHRPIFSLTVDKLARAKRPDLVDRLL 28
           ++ A K AILS+SDPD++A  F  A+ LP F  +RPI+  ++ KLARA+R DL+D ++
Sbjct: 39  SLRAAKSAILSQSDPDKLAQSFIQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVII 96