BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00006155
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group] g...    72   1e-10
gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indi...    72   1e-10
ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968...    71   2e-10
ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [S...    67   2e-09
ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   4e-07
gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma...    57   3e-06
ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [A...    56   6e-06

>ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Oryza brachyantha]
          Length = 422

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -3

Query: 267 TVDKLARANRPDLVDRLLSPLLSDVKCPQ-SEGFIIRLISLYSSAGMLDHAKATFNRIPH 91
           +V +LA A R DLV  +LS  L+ +  P  SEGF+IRLISLYS+AGM DH+ +TF  I  
Sbjct: 83  SVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTFRII-- 140

Query: 90  LLGRSGSDKSLSALLFGYYRNRRFDLVIK 4
                 SD++LSALL  Y+ NR +D  I+
Sbjct: 141 ---SPPSDRALSALLSAYHDNRLYDRAIQ 166


>ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
           gi|48716331|dbj|BAD22943.1| membrane-associated
           salt-inducible protein-like [Oryza sativa Japonica
           Group] gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza
           sativa Japonica Group] gi|125584252|gb|EAZ25183.1|
           hypothetical protein OsJ_08983 [Oryza sativa Japonica
           Group] gi|215769058|dbj|BAH01287.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 423

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -3

Query: 267 TVDKLARANRPDLVDRLLSPLLSDVKCPQ-SEGFIIRLISLYSSAGMLDHAKATFNRIPH 91
           +V +LA A R DLV  +LS  L+ +  P  SEGF+IRLISLYS+AGM DH+ +TF  +  
Sbjct: 84  SVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTFRIV-- 141

Query: 90  LLGRSGSDKSLSALLFGYYRNRRFDLVIK 4
                 SD++LSALL  Y+ NR +D  I+
Sbjct: 142 ---TPPSDRALSALLSAYHDNRLYDRAIQ 167


>gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
          Length = 423

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -3

Query: 267 TVDKLARANRPDLVDRLLSPLLSDVKCPQ-SEGFIIRLISLYSSAGMLDHAKATFNRIPH 91
           +V +LA A R DLV  +LS  L+ +  P  SEGF+IRLISLYS+AGM DH+ +TF  +  
Sbjct: 84  SVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTFRIV-- 141

Query: 90  LLGRSGSDKSLSALLFGYYRNRRFDLVIK 4
                 SD++LSALL  Y+ NR +D  I+
Sbjct: 142 ---TPPSDRALSALLSAYHDNRLYDRAIQ 167


>ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968|gb|ACG38952.1|
           hypothetical protein [Zea mays]
           gi|413939592|gb|AFW74143.1| hypothetical protein
           ZEAMMB73_602318 [Zea mays]
          Length = 419

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -3

Query: 267 TVDKLARANRPDLVDRLLSPLLSDVKCPQ-SEGFIIRLISLYSSAGMLDHAKATFNRIPH 91
           +V +LA A R DLV  +LS  L+ +  P  SEGF++RLISLYS+AGM DH+ A F     
Sbjct: 83  SVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDHSLAVFR---- 138

Query: 90  LLGRSGSDKSLSALLFGYYRNRRFDLVIK 4
            L +  SD++LSALL  Y+ NR +D  ++
Sbjct: 139 -LVKPASDRALSALLSAYHDNRLYDRTVR 166


>ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
           gi|241934669|gb|EES07814.1| hypothetical protein
           SORBIDRAFT_04g038280 [Sorghum bicolor]
          Length = 419

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -3

Query: 267 TVDKLARANRPDLVDRLLSPLLSDVKCPQ-SEGFIIRLISLYSSAGMLDHAKATFNRIPH 91
           +V +LA A R DLV  +LS  L+ +  P  SEGF++RLISLYS+AGM DH+   F     
Sbjct: 83  SVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDHSLTVFR---- 138

Query: 90  LLGRSGSDKSLSALLFGYYRNRRFDLVIK 4
            L    SD++LSALL  Y+ NR +D  ++
Sbjct: 139 -LVNPPSDRALSALLSTYHDNRLYDRAVR 166


>ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Brachypodium distachyon]
          Length = 423

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = -3

Query: 264 VDKLARANRPDLVDRLLSPLLSDVKCPQ-SEGFIIRLISLYSSAGMLDHAKATFNRIPHL 88
           V +LA A R DLV  +LS  L+ +  P  SEGF+IRLISLY++AGM  H+ +TF      
Sbjct: 87  VTRLASAGRRDLVFSILSSSLTALPAPHPSEGFLIRLISLYAAAGMPQHSLSTFR----- 141

Query: 87  LGRSGSDKSLSALLFGYYRNRRFDLVI 7
           L +  +D+  SALL  Y+   + DL +
Sbjct: 142 LVKPATDRVFSALLAAYHDTAQHDLAV 168


>dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 422

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -3

Query: 264 VDKLARANRPDLVDRLLSPLLSDVKCPQ-SEGFIIRLISLYSSAGMLDHAKATFNRIPHL 88
           V +L  A RPDLV  +LS  L+ +  P  SEGF+IRLI+LY+ AGM  H+ +TF  +   
Sbjct: 86  VSRLTAAARPDLVSSVLSASLTALPAPHPSEGFLIRLIALYADAGMPTHSLSTFRLVV-- 143

Query: 87  LGRSGSDKSLSALLFGYY 34
                SD++LSALL  Y+
Sbjct: 144 ---PPSDRALSALLAAYH 158


>gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma cacao]
          Length = 395

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = -3

Query: 267 TVDKLARANRPDLVDRLLSPLL---SDVKCPQSEGFIIRLISLYSSAGMLDHAKATFNRI 97
           ++ KLARANR DLVD LL        +    +SEGF IRLI LYS+AGM+  A  T   +
Sbjct: 70  SIRKLARANRLDLVDSLLQAQKLHSQNASALKSEGFWIRLIMLYSNAGMVPQALQTLEDL 129

Query: 96  PHLLGRSGSDKSLSALLFGYYRNRRFDLVIKT 1
                   S+KSL A+L  Y  N  F+ + ++
Sbjct: 130 CQNRYSIVSEKSLCAILTVYLNNGMFEQIYES 161


>ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [Amborella trichopoda]
           gi|548851196|gb|ERN09472.1| hypothetical protein
           AMTR_s00029p00104100 [Amborella trichopoda]
          Length = 454

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = -3

Query: 264 VDKLARANRPDLVDRLLSPLLSDVKCPQS--EGFIIRLISLYSSAGMLDHAKATFNRIPH 91
           V KLA   R DL+++ L    S  K P S  EGFIIRLI LYS AGM+D A  TF  +  
Sbjct: 133 VQKLAGYERFDLIEQALE---SHKKPPFSLMEGFIIRLILLYSEAGMVDKALDTFYEMDE 189

Query: 90  LLGRSGSDKSLSALLFGYYRNRRFD 16
            L    S+KS SA L G   N+RFD
Sbjct: 190 -LECPRSEKSFSATLSGLLLNKRFD 213