BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00005966
         (745 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal doma...   320   2e-85
ref|XP_003566293.1| PREDICTED: RNA polymerase II C-terminal doma...   320   4e-85
ref|XP_006654357.1| PREDICTED: RNA polymerase II C-terminal doma...   317   2e-84
dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]    313   3e-83
ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [S...   313   3e-83
gb|EMS57931.1| RNA polymerase II C-terminal domain phosphatase-l...   311   1e-82
ref|NP_001055440.1| Os05g0390500 [Oryza sativa Japonica Group] g...   308   2e-81
gb|AFW77884.1| CPL3 [Zea mays]                                        308   2e-81
ref|XP_003579679.1| PREDICTED: RNA polymerase II C-terminal doma...   308   2e-81
gb|EEC79156.1| hypothetical protein OsI_19829 [Oryza sativa Indi...   308   2e-81
ref|NP_001152445.1| CPL3 [Zea mays] gi|195656359|gb|ACG47647.1| ...   308   2e-81
dbj|BAK07377.1| predicted protein [Hordeum vulgare subsp. vulgare]    305   8e-81
gb|EMT13574.1| RNA polymerase II C-terminal domain phosphatase-l...   297   3e-78
ref|XP_004242583.1| PREDICTED: RNA polymerase II C-terminal doma...   286   5e-75
ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal doma...   286   5e-75
ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal doma...   285   1e-74
ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   284   2e-74
ref|XP_006838087.1| hypothetical protein AMTR_s00106p00017820 [A...   283   4e-74
ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Popu...   283   6e-74
ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Popu...   283   6e-74

>ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Setaria italica]
          Length = 543

 Score =  320 bits (821), Expect = 2e-85
 Identities = 166/247 (67%), Positives = 188/247 (76%), Gaps = 5/247 (2%)
 Frame = +3

Query: 18  KNV---ICPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXX 182
           KNV   +CP HPG+F GLC RCG  Q EED SGVAFGYIHK LRLG  E+ RLRGAD   
Sbjct: 98  KNVQVEVCP-HPGYFGGLCFRCGKPQDEEDASGVAFGYIHKGLRLGTSEIDRLRGADLKN 156

Query: 183 XXXXXXXXXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKL 362
                             NST+L D+ S E  L  +   +KDDPDRS+F LDSM MLTKL
Sbjct: 157 LLRERKLVLILDLDHTLINSTKLQDISSAENELGIRTAALKDDPDRSIFSLDSMQMLTKL 216

Query: 363 RPFVNNFLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGL 542
           RPFV NFLKEAS++FEMYIYTM +++YAIEIAKLLDP  VYF SKVI+ +DCTQRHQKGL
Sbjct: 217 RPFVRNFLKEASNMFEMYIYTMGDKAYAIEIAKLLDPSNVYFPSKVISNSDCTQRHQKGL 276

Query: 543 DVVLGAESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERES 722
           DV+LGAES+ VILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF  KSLS+ M+DERES
Sbjct: 277 DVILGAESVAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFGVKSLSESMQDERES 336

Query: 723 DGALATV 743
           DGALATV
Sbjct: 337 DGALATV 343


>ref|XP_003566293.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Brachypodium distachyon]
          Length = 492

 Score =  320 bits (819), Expect = 4e-85
 Identities = 159/241 (65%), Positives = 187/241 (77%), Gaps = 2/241 (0%)
 Frame = +3

Query: 27  ICPPHPGFFKGLCIRCGQI--EEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXX 200
           ICPPHPGF +GLCI+CG+I  EED  GVA GYIH+ LRLG  E+ RLRG+D         
Sbjct: 105 ICPPHPGFLRGLCIKCGKIQDEEDVPGVACGYIHEGLRLGTSEIERLRGSDLKKLLRERK 164

Query: 201 XXXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNN 380
                       NSTRL D+ + E  L  Q   +KDDPDRSLF L+ MHMLTKLRPFV  
Sbjct: 165 LVLILDLDHTLINSTRLHDISAAEMDLGIQTAALKDDPDRSLFTLERMHMLTKLRPFVRR 224

Query: 381 FLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGA 560
           FLKEAS++FEMYIYTM +++Y+IE+AKLLDPG VYF SKVI+ +DCTQRHQKGLDVVLGA
Sbjct: 225 FLKEASNMFEMYIYTMGDKAYSIEVAKLLDPGNVYFGSKVISNSDCTQRHQKGLDVVLGA 284

Query: 561 ESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALAT 740
           ES+ VILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF+ +SLS+LM DERESDGAL+T
Sbjct: 285 ESIAVILDDTEDVWQKHKENLILMERYHYFASSCRQFGFSVRSLSELMVDERESDGALST 344

Query: 741 V 743
           +
Sbjct: 345 I 345


>ref|XP_006654357.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Oryza brachyantha]
          Length = 557

 Score =  317 bits (813), Expect = 2e-84
 Identities = 160/241 (66%), Positives = 184/241 (76%), Gaps = 2/241 (0%)
 Frame = +3

Query: 27  ICPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXX 200
           ICPPHPGFF GLC +CG  Q EED  GVAFGYIHK L LG  E+ RLRGAD         
Sbjct: 110 ICPPHPGFFGGLCFKCGKKQDEEDVPGVAFGYIHKGLTLGTSEIDRLRGADLKNLLRERR 169

Query: 201 XXXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNN 380
                       NST+L+D+ + E  L  Q    KDDP+RSLFRLD+M MLTKLRPFV  
Sbjct: 170 LVLILDLDHTLINSTKLLDLSAAENELGIQSAASKDDPNRSLFRLDAMQMLTKLRPFVRE 229

Query: 381 FLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGA 560
           FLKEAS++FEMYIYTM +++YAIEIAKLLDP  VYF S VI+ +DCTQRHQKGLDV+LGA
Sbjct: 230 FLKEASNMFEMYIYTMGDKAYAIEIAKLLDPENVYFGSNVISNSDCTQRHQKGLDVILGA 289

Query: 561 ESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALAT 740
           ESL VILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF+A+SLS+ M+DERE DGALAT
Sbjct: 290 ESLAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFSARSLSESMQDEREGDGALAT 349

Query: 741 V 743
           +
Sbjct: 350 I 350


>dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score =  313 bits (803), Expect = 3e-83
 Identities = 158/241 (65%), Positives = 183/241 (75%), Gaps = 2/241 (0%)
 Frame = +3

Query: 27  ICPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXX 200
           ICPPHPGFF GLC RCG  Q EED  GVAFGY+HK LRLG  E+ RLRG+D         
Sbjct: 105 ICPPHPGFFGGLCFRCGKRQDEEDVPGVAFGYVHKGLRLGTSEIDRLRGSDLKNLLRERK 164

Query: 201 XXXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNN 380
                       NST+L D+ + E  L  Q    KDDP+ SLF L+ M MLTKLRPFV  
Sbjct: 165 LILILDLDHTLINSTKLHDISAAENNLGIQAAASKDDPNGSLFTLEGMQMLTKLRPFVRK 224

Query: 381 FLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGA 560
           FLKEAS++FEMYIYTM +++YAIEIAKLLDP  VYF+SKVI+ +DCTQRHQKGLD+VLGA
Sbjct: 225 FLKEASNMFEMYIYTMGDKAYAIEIAKLLDPRNVYFNSKVISNSDCTQRHQKGLDMVLGA 284

Query: 561 ESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALAT 740
           ES+ VILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF+ KSLS+LM+DER SDGALAT
Sbjct: 285 ESVAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFSVKSLSELMQDERGSDGALAT 344

Query: 741 V 743
           +
Sbjct: 345 I 345


>ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [Sorghum bicolor]
           gi|241915584|gb|EER88728.1| hypothetical protein
           SORBIDRAFT_10g025580 [Sorghum bicolor]
          Length = 558

 Score =  313 bits (803), Expect = 3e-83
 Identities = 159/238 (66%), Positives = 182/238 (76%), Gaps = 2/238 (0%)
 Frame = +3

Query: 36  PHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXX 209
           PHPG+F GLC RCG  Q EE+ SGVAFGYIHK LRLG  E+ RLRGAD            
Sbjct: 108 PHPGYFGGLCFRCGKPQDEENVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVL 167

Query: 210 XXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLK 389
                    NST+L D+ S E+ L  Q    KDDP+RS+F LDSM MLTKLRPFV  FLK
Sbjct: 168 ILDLDHTLINSTKLQDISSAEKDLGIQTAASKDDPNRSIFSLDSMQMLTKLRPFVREFLK 227

Query: 390 EASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESL 569
           EAS++FEMYIYTM +++YAIEIAKLLDP  +YF SKVI+ +DCTQRHQKGLDV+LGAES+
Sbjct: 228 EASNMFEMYIYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESV 287

Query: 570 VVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
            VILDDTE VWQ+HK+NLI MERYHFFASSCRQFGF  +SLS+ M+DERESDGALATV
Sbjct: 288 AVILDDTEYVWQKHKENLILMERYHFFASSCRQFGFGVRSLSESMQDERESDGALATV 345


>gb|EMS57931.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Triticum
           urartu]
          Length = 589

 Score =  311 bits (798), Expect = 1e-82
 Identities = 156/241 (64%), Positives = 182/241 (75%), Gaps = 2/241 (0%)
 Frame = +3

Query: 27  ICPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXX 200
           ICPPHPG+F GLC RCG  Q EED  GVAFGY+HK LRLG  E+ RLRG+D         
Sbjct: 154 ICPPHPGYFGGLCFRCGKRQDEEDVPGVAFGYVHKGLRLGTTEIDRLRGSDLKNLLRERK 213

Query: 201 XXXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNN 380
                       NST+L D+ + E  L  Q    KDDP+ SLF L+ M MLTKLRPFV  
Sbjct: 214 LILILDLDHTLINSTKLHDISAAENNLGIQTAASKDDPNGSLFTLEGMQMLTKLRPFVRK 273

Query: 381 FLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGA 560
           FLKEAS++FEMYIYTM +++YAIEIAKLLDP  VYF+SKVI+ +DCTQRHQKGLD+VLGA
Sbjct: 274 FLKEASNMFEMYIYTMGDKAYAIEIAKLLDPRNVYFNSKVISNSDCTQRHQKGLDMVLGA 333

Query: 561 ESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALAT 740
           ES+ VILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF+ KSLS+ M+DER SDGALAT
Sbjct: 334 ESVAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFSVKSLSEFMQDERGSDGALAT 393

Query: 741 V 743
           +
Sbjct: 394 I 394


>ref|NP_001055440.1| Os05g0390500 [Oryza sativa Japonica Group]
           gi|57863785|gb|AAS86390.2| unknown protein [Oryza sativa
           Japonica Group] gi|113578991|dbj|BAF17354.1|
           Os05g0390500 [Oryza sativa Japonica Group]
           gi|215695102|dbj|BAG90293.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222631469|gb|EEE63601.1| hypothetical protein
           OsJ_18418 [Oryza sativa Japonica Group]
          Length = 536

 Score =  308 bits (788), Expect = 2e-81
 Identities = 157/240 (65%), Positives = 179/240 (74%), Gaps = 2/240 (0%)
 Frame = +3

Query: 30  CPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXX 203
           CPPHPGFF GLC RCG  Q EED  GVAFGYIHK LRLG  E+ RLRGAD          
Sbjct: 112 CPPHPGFFGGLCYRCGKRQDEEDVPGVAFGYIHKGLRLGTTEIDRLRGADLKNLLRERKL 171

Query: 204 XXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNF 383
                      NST+L D+ + E  L  Q    +  PDRSLF L++M MLTKLRPFV  F
Sbjct: 172 VLILDLDHTLINSTKLFDLSAAENELGIQSAAKEVVPDRSLFTLETMQMLTKLRPFVRRF 231

Query: 384 LKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAE 563
           LKEAS +FEMYIYTM +++YAIEIAKLLDP  VYF SKVI+ +DCTQRHQKGLDVVLG E
Sbjct: 232 LKEASDMFEMYIYTMGDKAYAIEIAKLLDPDNVYFGSKVISNSDCTQRHQKGLDVVLGDE 291

Query: 564 SLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           S+ VILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF A+SLS+ M+DERE+DGALAT+
Sbjct: 292 SVAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFGARSLSETMQDERENDGALATI 351


>gb|AFW77884.1| CPL3 [Zea mays]
          Length = 533

 Score =  308 bits (788), Expect = 2e-81
 Identities = 158/238 (66%), Positives = 180/238 (75%), Gaps = 2/238 (0%)
 Frame = +3

Query: 36  PHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXX 209
           PHPG F GLCI CG  Q EED SGVAFGYIHK LRLG  E+ RLRGAD            
Sbjct: 106 PHPGHFGGLCIICGKPQDEEDVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVL 165

Query: 210 XXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLK 389
                    NST+L D+ S E+ L  Q    KDDP+RS+F LD M MLTKLRPFV  FLK
Sbjct: 166 ILDLDHTLINSTKLQDISSAEKDLGIQSAASKDDPNRSIFALDLMPMLTKLRPFVREFLK 225

Query: 390 EASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESL 569
           EAS++FEMYIYTM +++YAIEIAKLLDP  +YF SKVI+ +DCTQRHQKGLDV+LGAES+
Sbjct: 226 EASNMFEMYIYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESV 285

Query: 570 VVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
            VILDDTE VWQ+HK+NLI MERYHFFASSCRQFGF  +SLS+ ++DERESDGALATV
Sbjct: 286 AVILDDTEYVWQKHKENLILMERYHFFASSCRQFGFGVRSLSESLQDERESDGALATV 343


>ref|XP_003579679.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Brachypodium distachyon]
          Length = 493

 Score =  308 bits (788), Expect = 2e-81
 Identities = 155/240 (64%), Positives = 183/240 (76%), Gaps = 2/240 (0%)
 Frame = +3

Query: 27  ICPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXX 200
           ICPPHPGFF GLC RCG  Q EED  GVAFGYIHK LRLG  E+ RLRG++         
Sbjct: 104 ICPPHPGFFGGLCFRCGKRQDEEDVPGVAFGYIHKGLRLGTSEIDRLRGSNVKSLLRERK 163

Query: 201 XXXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNN 380
                       NST+L D+ + E  L  Q    +D P++SLF L++M MLTKLRPFV  
Sbjct: 164 LVLILDLDHTLINSTKLHDISAAERDLGIQTFASEDAPEKSLFTLEAMQMLTKLRPFVCK 223

Query: 381 FLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGA 560
           FLKEAS++FEMYIYTM +++YAIEIAKLLDPG VYF SKVI+ +DCTQRHQKGLDVVLGA
Sbjct: 224 FLKEASNMFEMYIYTMGDKAYAIEIAKLLDPGNVYFGSKVISNSDCTQRHQKGLDVVLGA 283

Query: 561 ESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALAT 740
           E++ +ILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF+ K+LS+ M+DERESDGALAT
Sbjct: 284 ENVAIILDDTEYVWQKHKENLILMERYHYFASSCRQFGFSVKALSESMQDERESDGALAT 343


>gb|EEC79156.1| hypothetical protein OsI_19829 [Oryza sativa Indica Group]
          Length = 574

 Score =  308 bits (788), Expect = 2e-81
 Identities = 157/240 (65%), Positives = 179/240 (74%), Gaps = 2/240 (0%)
 Frame = +3

Query: 30  CPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXX 203
           CPPHPGFF GLC RCG  Q EED  GVAFGYIHK LRLG  E+ RLRGAD          
Sbjct: 138 CPPHPGFFGGLCYRCGKRQDEEDVPGVAFGYIHKGLRLGTTEIDRLRGADLKNLLRERKL 197

Query: 204 XXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNF 383
                      NST+L D+ + E  L  Q    +  PDRSLF L++M MLTKLRPFV  F
Sbjct: 198 VLILDLDHTLINSTKLFDLSAAENELGIQSAAKEVVPDRSLFTLETMQMLTKLRPFVRRF 257

Query: 384 LKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAE 563
           LKEAS +FEMYIYTM +++YAIEIAKLLDP  VYF SKVI+ +DCTQRHQKGLDVVLG E
Sbjct: 258 LKEASDMFEMYIYTMGDKAYAIEIAKLLDPDNVYFGSKVISNSDCTQRHQKGLDVVLGDE 317

Query: 564 SLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           S+ VILDDTE VWQ+HK+NLI MERYH+FASSCRQFGF A+SLS+ M+DERE+DGALAT+
Sbjct: 318 SVAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFGARSLSETMQDERENDGALATI 377


>ref|NP_001152445.1| CPL3 [Zea mays] gi|195656359|gb|ACG47647.1| CPL3 [Zea mays]
          Length = 531

 Score =  308 bits (788), Expect = 2e-81
 Identities = 158/238 (66%), Positives = 180/238 (75%), Gaps = 2/238 (0%)
 Frame = +3

Query: 36  PHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXX 209
           PHPG F GLCI CG  Q EED SGVAFGYIHK LRLG  E+ RLRGAD            
Sbjct: 104 PHPGHFGGLCIICGKPQDEEDVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVL 163

Query: 210 XXXXXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLK 389
                    NST+L D+ S E+ L  Q    KDDP+RS+F LD M MLTKLRPFV  FLK
Sbjct: 164 ILDLDHTLINSTKLQDISSAEKDLGIQSAASKDDPNRSIFALDLMPMLTKLRPFVREFLK 223

Query: 390 EASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESL 569
           EAS++FEMYIYTM +++YAIEIAKLLDP  +YF SKVI+ +DCTQRHQKGLDV+LGAES+
Sbjct: 224 EASNMFEMYIYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESV 283

Query: 570 VVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
            VILDDTE VWQ+HK+NLI MERYHFFASSCRQFGF  +SLS+ ++DERESDGALATV
Sbjct: 284 AVILDDTEYVWQKHKENLILMERYHFFASSCRQFGFGVRSLSESLQDERESDGALATV 341


>dbj|BAK07377.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 488

 Score =  305 bits (782), Expect = 8e-81
 Identities = 156/242 (64%), Positives = 182/242 (75%), Gaps = 4/242 (1%)
 Frame = +3

Query: 30  CPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXX 203
           CPPHPGFF GLCI CG  Q EED  GVAFGYIHK LRLG  EM RLR ++          
Sbjct: 104 CPPHPGFFGGLCINCGKSQDEEDVPGVAFGYIHKGLRLGTSEMDRLRESEVKNLLRERKL 163

Query: 204 XXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMK--DDPDRSLFRLDSMHMLTKLRPFVN 377
                      NSTRL D+ + E  L  Q    K  DDP+RSLF L  MHMLTKLRPFV 
Sbjct: 164 VLILDLDHTLINSTRLHDISAAEMDLGIQTAASKNADDPERSLFTLQGMHMLTKLRPFVR 223

Query: 378 NFLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLG 557
            FL+EAS++F+MYIYTM +++YAIEIAKLLDPG VYFDSKVI+ +DCTQRHQKGLDVVLG
Sbjct: 224 KFLEEASNMFDMYIYTMGDKAYAIEIAKLLDPGNVYFDSKVISNSDCTQRHQKGLDVVLG 283

Query: 558 AESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALA 737
            + + VI+DDTE VWQ+HK+NLI MERYH+FA+SCRQFGF+ +SLS+LM+DERESDGALA
Sbjct: 284 DDKVAVIIDDTEHVWQKHKENLILMERYHYFAASCRQFGFSDQSLSELMQDERESDGALA 343

Query: 738 TV 743
           T+
Sbjct: 344 TI 345


>gb|EMT13574.1| RNA polymerase II C-terminal domain phosphatase-like protein 4
           [Aegilops tauschii]
          Length = 632

 Score =  297 bits (760), Expect = 3e-78
 Identities = 158/277 (57%), Positives = 184/277 (66%), Gaps = 38/277 (13%)
 Frame = +3

Query: 27  ICPPHPGFFKGLCIRCG--QIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXX 200
           ICPPHPG+F GLC RCG  Q EED  GVAFGY+HK LRLG  E+ RLRG+D         
Sbjct: 159 ICPPHPGYFGGLCFRCGKRQDEEDVPGVAFGYVHKGLRLGTTEIDRLRGSDLKNLLREKK 218

Query: 201 XXXXXXXXXXXXNSTRLVDVISDEEYLLRQIDGMK------------------------- 305
                       NST+L D+ + E  L  QI   K                         
Sbjct: 219 LILILDLDHTLINSTKLHDISAAENNLGIQIAASKGCRISYSSPETSVVHGYFLPPSVSR 278

Query: 306 -----------DDPDRSLFRLDSMHMLTKLRPFVNNFLKEASSLFEMYIYTMAERSYAIE 452
                      DDP+ SLF L+ M MLTKLRPFV  FLKEAS++FEMYIYTM +++YAIE
Sbjct: 279 LLQLTTNMPYADDPNGSLFTLEGMQMLTKLRPFVRKFLKEASNMFEMYIYTMGDKAYAIE 338

Query: 453 IAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESLVVILDDTEVVWQRHKDNLIQM 632
           IAKLLDP  VYF+SKVI+ +DCTQRHQKGLD+VLGAES+ VILDDTE VWQ+HK+NLI M
Sbjct: 339 IAKLLDPRNVYFNSKVISNSDCTQRHQKGLDMVLGAESVAVILDDTEYVWQKHKENLILM 398

Query: 633 ERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           ERYH+FASSCRQFGF+ KSLS+LM+DER SDGALAT+
Sbjct: 399 ERYHYFASSCRQFGFSVKSLSELMQDERGSDGALATI 435


>ref|XP_004242583.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Solanum lycopersicum]
          Length = 472

 Score =  286 bits (732), Expect = 5e-75
 Identities = 144/235 (61%), Positives = 173/235 (73%)
 Frame = +3

Query: 39  HPGFFKGLCIRCGQIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXXXXX 218
           HPG   G+CIRCGQ  EDESGVAFGYIHK+LRL + E+ARLR  D               
Sbjct: 112 HPGVMGGMCIRCGQKVEDESGVAFGYIHKNLRLADDEVARLREKDLKNLLRHRKLILVLD 171

Query: 219 XXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLKEAS 398
                 NSTRL D+ ++E YL  Q + + D    +LF+LD +HM+TKLRPFV+ FLKEAS
Sbjct: 172 LDHTLLNSTRLADISAEESYLKDQREVLPDALRSNLFKLDWIHMMTKLRPFVHTFLKEAS 231

Query: 399 SLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESLVVI 578
           SLFEMYIYTM ER YA+E+AKLLDPG +YF S+VI Q+D T+RHQKGLDVVLG ES V+I
Sbjct: 232 SLFEMYIYTMGERPYALEMAKLLDPGGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLI 291

Query: 579 LDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           LDDTEVVW +H++NLI M+RYHFF SSCRQFG   KSLS+   DE E++GALA+V
Sbjct: 292 LDDTEVVWGKHRENLILMDRYHFFTSSCRQFGLKCKSLSEQKSDENEAEGALASV 346


>ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Solanum lycopersicum]
          Length = 512

 Score =  286 bits (732), Expect = 5e-75
 Identities = 144/235 (61%), Positives = 173/235 (73%)
 Frame = +3

Query: 39  HPGFFKGLCIRCGQIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXXXXX 218
           HPG   G+CIRCGQ  EDESGVAFGYIHK+LRL + E+ARLR  D               
Sbjct: 152 HPGVMGGMCIRCGQKVEDESGVAFGYIHKNLRLADDEVARLREKDLKNLLRHRKLILVLD 211

Query: 219 XXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLKEAS 398
                 NSTRL D+ ++E YL  Q + + D    +LF+LD +HM+TKLRPFV+ FLKEAS
Sbjct: 212 LDHTLLNSTRLADISAEESYLKDQREVLPDALRSNLFKLDWIHMMTKLRPFVHTFLKEAS 271

Query: 399 SLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESLVVI 578
           SLFEMYIYTM ER YA+E+AKLLDPG +YF S+VI Q+D T+RHQKGLDVVLG ES V+I
Sbjct: 272 SLFEMYIYTMGERPYALEMAKLLDPGGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLI 331

Query: 579 LDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           LDDTEVVW +H++NLI M+RYHFF SSCRQFG   KSLS+   DE E++GALA+V
Sbjct: 332 LDDTEVVWGKHRENLILMDRYHFFTSSCRQFGLKCKSLSEQKSDENEAEGALASV 386


>ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Solanum tuberosum]
          Length = 478

 Score =  285 bits (729), Expect = 1e-74
 Identities = 143/235 (60%), Positives = 172/235 (73%)
 Frame = +3

Query: 39  HPGFFKGLCIRCGQIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXXXXX 218
           HPG   G+CIRCGQ  EDESGVAFGYIHK+LRL + E+ARLR  D               
Sbjct: 118 HPGVMGGMCIRCGQKVEDESGVAFGYIHKNLRLADDEVARLRDKDLKNLLRHKKLILVLD 177

Query: 219 XXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLKEAS 398
                 NSTRL D+ ++E YL  Q + + D    +LF+LD +HM+TKLRPFV+ FLKEAS
Sbjct: 178 LDHTLLNSTRLADISAEESYLKDQREVLPDALRNNLFKLDWIHMMTKLRPFVHTFLKEAS 237

Query: 399 SLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESLVVI 578
           SLFEMYIYTM ER YA+E+A LLDPG +YF S+VI Q+D T+RHQKGLDVVLG ES V+I
Sbjct: 238 SLFEMYIYTMGERPYALEMASLLDPGGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLI 297

Query: 579 LDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           LDDTEVVW +H++NLI M+RYHFF SSCRQFG   KSLS+   DE E++GALA+V
Sbjct: 298 LDDTEVVWGKHRENLILMDRYHFFTSSCRQFGLKCKSLSEQKSDENEAEGALASV 352


>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  284 bits (727), Expect = 2e-74
 Identities = 141/235 (60%), Positives = 171/235 (72%)
 Frame = +3

Query: 39  HPGFFKGLCIRCGQIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXXXXX 218
           HPG F  +CI CG+   +E+GV FGYIHK LRL N E+ RLR  D               
Sbjct: 113 HPGSFGDMCILCGERLIEETGVTFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLD 172

Query: 219 XXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLKEAS 398
                 NST+L+ + ++EEYL  QID M+D  + SLF +D MHM+TKLRPF+  FLKEAS
Sbjct: 173 LDHTLLNSTQLMHLTAEEEYLKSQIDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEAS 232

Query: 399 SLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESLVVI 578
            +FEMYIYTM +R+YA+E+AK LDPG+ YF+++VI++ D TQRHQKGLD+VLG ES V+I
Sbjct: 233 QMFEMYIYTMGDRAYALEMAKFLDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLI 292

Query: 579 LDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           LDDTE  W +HKDNLI MERYHFFASSCRQFGF  KSLSQL  DE ESDGALA+V
Sbjct: 293 LDDTENAWTKHKDNLILMERYHFFASSCRQFGFECKSLSQLKSDENESDGALASV 347


>ref|XP_006838087.1| hypothetical protein AMTR_s00106p00017820 [Amborella trichopoda]
           gi|548840545|gb|ERN00656.1| hypothetical protein
           AMTR_s00106p00017820 [Amborella trichopoda]
          Length = 486

 Score =  283 bits (724), Expect = 4e-74
 Identities = 142/251 (56%), Positives = 177/251 (70%), Gaps = 12/251 (4%)
 Frame = +3

Query: 27  ICPPHPGFFKGLCIRCGQIEEDES------GVAFGYIHKDLRLGNVEMARLRGADXXXXX 188
           +CPPHPGF+K +CIRCG+ ++DE+       VAF YIHKDL+LG  E+ARLR  D     
Sbjct: 104 VCPPHPGFYKDMCIRCGEQKDDETVARKETAVAFNYIHKDLKLGAEEVARLRATDLKNLY 163

Query: 189 XXXXXXXXXXXXXXXXNSTRLVDVISDEE------YLLRQIDGMKDDPDRSLFRLDSMHM 350
                           NSTRLVDV  +EE      YL ++      D   +LF+L+ +HM
Sbjct: 164 RRRKLYLVLDLDHTLLNSTRLVDVSPEEEAYLNATYLNKETSSSNGDTSGTLFKLEPLHM 223

Query: 351 LTKLRPFVNNFLKEASSLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRH 530
           LTKLRPFV  FLKEA+++FEMY+YTM ER+YA+E+AKLLDP  VYF S+VI+Q D T RH
Sbjct: 224 LTKLRPFVRTFLKEANTMFEMYVYTMGERAYALEMAKLLDPSGVYFGSRVISQGDSTVRH 283

Query: 531 QKGLDVVLGAESLVVILDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKD 710
           QKGLDVVLG+E  VVILDDTE VW +HK+NL+ MERYHFF+SSCRQF  + KSLS+L +D
Sbjct: 284 QKGLDVVLGSECAVVILDDTEHVWHKHKENLVLMERYHFFSSSCRQFNVHYKSLSELKRD 343

Query: 711 ERESDGALATV 743
           E ESDG LA++
Sbjct: 344 ESESDGMLASI 354


>ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
           gi|550318538|gb|EEF03112.2| hypothetical protein
           POPTR_0018s11760g [Populus trichocarpa]
          Length = 472

 Score =  283 bits (723), Expect = 6e-74
 Identities = 143/235 (60%), Positives = 169/235 (71%)
 Frame = +3

Query: 39  HPGFFKGLCIRCGQIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXXXXX 218
           HPG F  +CI CGQ+ + ESGV FGYIHK LRLGN E+ RLR  D               
Sbjct: 110 HPGSFGTMCIVCGQLLDGESGVTFGYIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILD 169

Query: 219 XXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLKEAS 398
                 NST+L+ +  DEEYL  Q D ++D    SLF L SM M+TKLRPFV  FLKEAS
Sbjct: 170 LDHTLLNSTQLMHMTLDEEYLNGQTDSLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEAS 229

Query: 399 SLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESLVVI 578
            +FEMYIYTM +R+YA+E+AKLLDPG+ YF++KVI++ D TQRHQKGLDVVLG ES V+I
Sbjct: 230 QMFEMYIYTMGDRAYALEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLI 289

Query: 579 LDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           LDDTE  W +HKDNLI MERYHFFASSC QFGFN KSLS+   DE ES+GALA++
Sbjct: 290 LDDTENAWMKHKDNLILMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASI 344


>ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
           gi|550318537|gb|EEF03111.2| hypothetical protein
           POPTR_0018s11760g [Populus trichocarpa]
          Length = 468

 Score =  283 bits (723), Expect = 6e-74
 Identities = 143/235 (60%), Positives = 169/235 (71%)
 Frame = +3

Query: 39  HPGFFKGLCIRCGQIEEDESGVAFGYIHKDLRLGNVEMARLRGADXXXXXXXXXXXXXXX 218
           HPG F  +CI CGQ+ + ESGV FGYIHK LRLGN E+ RLR  D               
Sbjct: 110 HPGSFGTMCIVCGQLLDGESGVTFGYIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILD 169

Query: 219 XXXXXXNSTRLVDVISDEEYLLRQIDGMKDDPDRSLFRLDSMHMLTKLRPFVNNFLKEAS 398
                 NST+L+ +  DEEYL  Q D ++D    SLF L SM M+TKLRPFV  FLKEAS
Sbjct: 170 LDHTLLNSTQLMHMTLDEEYLNGQTDSLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEAS 229

Query: 399 SLFEMYIYTMAERSYAIEIAKLLDPGKVYFDSKVITQADCTQRHQKGLDVVLGAESLVVI 578
            +FEMYIYTM +R+YA+E+AKLLDPG+ YF++KVI++ D TQRHQKGLDVVLG ES V+I
Sbjct: 230 QMFEMYIYTMGDRAYALEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLI 289

Query: 579 LDDTEVVWQRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATV 743
           LDDTE  W +HKDNLI MERYHFFASSC QFGFN KSLS+   DE ES+GALA++
Sbjct: 290 LDDTENAWMKHKDNLILMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASI 344