BLASTX nr result
ID: Zingiber25_contig00005922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00005922
(541 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004508746.1| PREDICTED: putative pentatricopeptide repeat... 96 4e-18
gb|EOY21824.1| Pentatricopeptide repeat (PPR) superfamily protei... 96 5e-18
gb|EXB44677.1| hypothetical protein L484_015934 [Morus notabilis] 95 1e-17
ref|XP_006827215.1| hypothetical protein AMTR_s00010p00259780 [A... 94 2e-17
gb|EMJ12481.1| hypothetical protein PRUPE_ppa002983mg [Prunus pe... 94 2e-17
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 94 2e-17
ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat... 94 2e-17
gb|ESW13452.1| hypothetical protein PHAVU_008G197400g [Phaseolus... 94 2e-17
ref|XP_002316516.1| hypothetical protein POPTR_0010s24080g [Popu... 93 3e-17
ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat... 93 5e-17
ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat... 92 6e-17
ref|XP_006476606.1| PREDICTED: putative pentatricopeptide repeat... 92 1e-16
ref|XP_006439598.1| hypothetical protein CICLE_v10018977mg [Citr... 92 1e-16
ref|XP_004301151.1| PREDICTED: putative pentatricopeptide repeat... 91 2e-16
ref|XP_006300775.1| hypothetical protein CARUB_v10019852mg [Caps... 88 1e-15
ref|XP_004252210.1| PREDICTED: putative pentatricopeptide repeat... 88 1e-15
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,... 88 1e-15
ref|XP_006362622.1| PREDICTED: putative pentatricopeptide repeat... 87 3e-15
ref|XP_002887547.1| pentatricopeptide repeat-containing protein ... 85 1e-14
ref|NP_177597.1| pentatricopeptide repeat-containing protein [Ar... 84 2e-14
>ref|XP_004508746.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cicer arietinum]
Length = 773
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R LLPKHV AV+K QKDPL+ALEMFNS+ ++GFKH LFTYKCM+ KLG HG+F ME++
Sbjct: 3 RVLLPKHVAAVVKVQKDPLKALEMFNSSKNEEGFKHTLFTYKCMLQKLGFHGEFNKMENL 62
Query: 535 IS 540
+S
Sbjct: 63 LS 64
>gb|EOY21824.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 759
Score = 95.9 bits (237), Expect = 5e-18
Identities = 40/60 (66%), Positives = 53/60 (88%)
Frame = +1
Query: 358 TLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
TLLPKHV AV+KYQKDPL+ALE+FN+ ++ GFKH L TYKCM++KLG HG+F+AME+++
Sbjct: 4 TLLPKHVAAVVKYQKDPLKALEIFNAVKKEVGFKHTLLTYKCMIEKLGCHGEFEAMENVL 63
>gb|EXB44677.1| hypothetical protein L484_015934 [Morus notabilis]
Length = 766
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = +1
Query: 370 KHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDIIS 540
KHVVAVIKYQKDPL+ALEMFNS ++DGF+HNL TYK MV+KLG HG+F+AME+++S
Sbjct: 8 KHVVAVIKYQKDPLKALEMFNSVKKEDGFRHNLLTYKSMVEKLGFHGEFEAMENLLS 64
>ref|XP_006827215.1| hypothetical protein AMTR_s00010p00259780 [Amborella trichopoda]
gi|548831644|gb|ERM94452.1| hypothetical protein
AMTR_s00010p00259780 [Amborella trichopoda]
Length = 762
Score = 94.4 bits (233), Expect = 2e-17
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = +1
Query: 358 TLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
TLLPKHV V+KYQ+DPLRALEMFNS ++DGF H L TYKCM++KLG H +F+AME+++
Sbjct: 4 TLLPKHVAVVVKYQRDPLRALEMFNSVKKEDGFTHTLLTYKCMIEKLGFHREFEAMENLL 63
>gb|EMJ12481.1| hypothetical protein PRUPE_ppa002983mg [Prunus persica]
Length = 615
Score = 94.4 bits (233), Expect = 2e-17
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R LLPKHV AVIK QKDPL+ALEMFNS ++DGFKH L TYKCM++KLG HG+F+ ME +
Sbjct: 3 RALLPKHVSAVIKCQKDPLKALEMFNSVNKEDGFKHTLQTYKCMIEKLGVHGEFEDMERV 62
Query: 535 IS 540
+S
Sbjct: 63 LS 64
>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 94.4 bits (233), Expect = 2e-17
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R L PKHV AVI+YQ DPL AL+MFN +DGFKH L TYKCM++KLG HGKF+AMED+
Sbjct: 3 RALQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDV 62
Query: 535 IS 540
++
Sbjct: 63 LA 64
>ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 94.4 bits (233), Expect = 2e-17
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R L PKHV AVI+YQ DPL AL+MFN +DGFKH L TYKCM++KLG HGKF+AMED+
Sbjct: 3 RALQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDV 62
Query: 535 IS 540
++
Sbjct: 63 LA 64
>gb|ESW13452.1| hypothetical protein PHAVU_008G197400g [Phaseolus vulgaris]
Length = 772
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R LLPKHV AV+K QKDPL+ALEMF SA ++ GFKH L TYKCMV KLG HG+F+ ME +
Sbjct: 3 RALLPKHVAAVVKAQKDPLKALEMFKSAKKESGFKHTLLTYKCMVQKLGHHGEFEEMEKV 62
Query: 535 IS 540
+S
Sbjct: 63 LS 64
>ref|XP_002316516.1| hypothetical protein POPTR_0010s24080g [Populus trichocarpa]
gi|566192485|ref|XP_006378798.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| hypothetical protein
POPTR_0010s24080g [Populus trichocarpa]
gi|550330488|gb|ERP56595.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 761
Score = 93.2 bits (230), Expect = 3e-17
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = +1
Query: 358 TLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
+LLPKHV AV+K QKDPL+ALEMFN R+DGFKH+L TYKC++ KLG HG F AME+++
Sbjct: 4 SLLPKHVAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVL 63
Query: 538 S 540
+
Sbjct: 64 A 64
>ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 1428
Score = 92.8 bits (229), Expect = 5e-17
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
RTLLPKHV AV+K Q DPL+ALEMFNSA +DGFKH TYKC+V KLG HG+F+ ME +
Sbjct: 3 RTLLPKHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKL 62
Query: 535 IS 540
+S
Sbjct: 63 LS 64
>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
unnamed protein product [Vitis vinifera]
Length = 764
Score = 92.4 bits (228), Expect = 6e-17
Identities = 39/60 (65%), Positives = 53/60 (88%)
Frame = +1
Query: 361 LLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDIIS 540
LLPKHV AV+KYQK+PL+ALE+FNS ++DGFKH L TYK M++KLG HG+F+AME++++
Sbjct: 5 LLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLA 64
>ref|XP_006476606.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like isoform X1 [Citrus sinensis]
Length = 759
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R++LPKHV AV+K+QK+PL ALEMFNS R+DGFKH L TYK M+DKLG HG F+ ME++
Sbjct: 3 RSVLPKHVAAVVKHQKNPLTALEMFNSVKREDGFKHTLLTYKYMIDKLGFHGNFEEMENL 62
Query: 535 I 537
+
Sbjct: 63 L 63
>ref|XP_006439598.1| hypothetical protein CICLE_v10018977mg [Citrus clementina]
gi|557541860|gb|ESR52838.1| hypothetical protein
CICLE_v10018977mg [Citrus clementina]
Length = 759
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R++LPKHV AV+K+QK+PL ALEMFNS R+DGFKH L TYK M+DKLG HG F+ ME++
Sbjct: 3 RSVLPKHVAAVVKHQKNPLMALEMFNSVKREDGFKHTLLTYKYMIDKLGFHGNFEEMENL 62
Query: 535 I 537
+
Sbjct: 63 L 63
>ref|XP_004301151.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Fragaria vesca subsp. vesca]
Length = 773
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = +1
Query: 355 RTLLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDI 534
R LLPKHV AV+ QKDP +ALEMFNS ++DGFKH L TYKCM++K G HG+F+AME +
Sbjct: 3 RPLLPKHVSAVVMCQKDPFKALEMFNSVKKEDGFKHTLSTYKCMIEKFGFHGEFEAMEHV 62
Query: 535 IS 540
++
Sbjct: 63 LA 64
>ref|XP_006300775.1| hypothetical protein CARUB_v10019852mg [Capsella rubella]
gi|482569485|gb|EOA33673.1| hypothetical protein
CARUB_v10019852mg [Capsella rubella]
Length = 760
Score = 88.2 bits (217), Expect = 1e-15
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +1
Query: 361 LLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
LLP+HV AVIK Q+DP++ALEMFNS ++DGFKH L TY+ +V+KLG HGKF+AME+++
Sbjct: 5 LLPRHVTAVIKCQRDPMKALEMFNSMKKEDGFKHTLSTYRSVVEKLGLHGKFEAMEEVL 63
>ref|XP_004252210.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Solanum lycopersicum]
Length = 796
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +1
Query: 361 LLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
LLPKHV AV+K QK+PLRALE+FNS ++ GF HNLFTYKC+V+KL +G+F AME +I
Sbjct: 5 LLPKHVAAVLKCQKNPLRALEIFNSVKKEHGFSHNLFTYKCIVEKLSYYGEFNAMESVI 63
>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 735
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +1
Query: 361 LLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
LLPKHV AV+KYQKDPL+AL +FNS ++DGFKH TYK M++KLG HG+F AME ++
Sbjct: 5 LLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVL 63
>ref|XP_006362622.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Solanum tuberosum]
Length = 768
Score = 87.0 bits (214), Expect = 3e-15
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +1
Query: 361 LLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
+LPKHV AV+K QK+PLRALE+FNS ++ GF HNLFTYKC+V+KL +G+F+AME +I
Sbjct: 5 VLPKHVAAVLKCQKNPLRALEIFNSVKKEHGFSHNLFTYKCIVEKLSYYGEFRAMEGVI 63
>ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333388|gb|EFH63806.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 763
Score = 85.1 bits (209), Expect = 1e-14
Identities = 36/59 (61%), Positives = 50/59 (84%)
Frame = +1
Query: 361 LLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
LLPKHV VI+ QKDP++ALEMFNS ++DGFKH L TY+ +++KLG +GKF+AME+++
Sbjct: 5 LLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVL 63
>ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g74580 gi|12324819|gb|AAG52381.1|AC011765_33
hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/59 (62%), Positives = 50/59 (84%)
Frame = +1
Query: 361 LLPKHVVAVIKYQKDPLRALEMFNSAARDDGFKHNLFTYKCMVDKLGSHGKFKAMEDII 537
LLPKHV AVIK QKDP++ALEMFNS ++ GFKH L TY+ +++KLG +GKF+AME+++
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63