BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00005650
         (2055 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]              1052   0.0  
sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A gi|2664190|em...  1040   0.0  
gb|AEK26583.1| phytochrome A [Populus tremula]                       1040   0.0  
gb|AEA50880.1| phyA [Populus tremula]                                1040   0.0  
ref|XP_002318913.1| phytochrome A family protein [Populus tricho...  1038   0.0  
gb|EXB57569.1| Phytochrome type A [Morus notabilis]                  1035   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1029   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1028   0.0  
ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citr...  1026   0.0  
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...  1026   0.0  
sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a gi|1800215|gb...  1023   0.0  
ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [S...  1023   0.0  
gb|AAR30887.1| phytochrome A [Sorghum bicolor]                       1023   0.0  
gb|AAR30893.1| phytochrome A [Sorghum arundinaceum] gi|39777249|...  1023   0.0  
gb|AAR30888.1| phytochrome A [Sorghum bicolor] gi|39777253|gb|AA...  1023   0.0  
gb|AAR30889.1| phytochrome A [Sorghum bicolor] gi|39777245|gb|AA...  1023   0.0  
gb|AAR30890.1| phytochrome A [Sorghum arundinaceum]                  1023   0.0  
gb|AAR30895.1| phytochrome A [Sorghum arundinaceum]                  1023   0.0  
gb|AAR30891.1| phytochrome A [Sorghum arundinaceum]                  1023   0.0  
gb|AAR30884.1| phytochrome A [Sorghum bicolor]                       1023   0.0  

>gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
          Length = 1118

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 527/683 (77%), Positives = 591/683 (86%), Gaps = 3/683 (0%)
 Frame = -3

Query: 2050 SARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVTAYLQHIQKGKLI 1871
            SARI+AQTTVDAKLDAEF+  G  FDYSQS+ A    P +E+RSEKVTAYLQHIQ+GKLI
Sbjct: 19   SARIIAQTTVDAKLDAEFDAMGTCFDYSQSIRA----PPDEQRSEKVTAYLQHIQRGKLI 74

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK FKV+A+SENAPEMLTMVS TVPSVGDHPT+ IGTDVR+LFTSPSTAA
Sbjct: 75   QPFGCLLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAA 134

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF EVSLLNPILVHCK+SG+PFYAIVHRVTGCLI+DFEPVKP++VPMTAAGALQS
Sbjct: 135  LQKALGFAEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQS 194

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+KLQSLP G+M++LCNTVIEEVF+LTGYDRVMVYKFH+DDHGEVFAEITKPG
Sbjct: 195  YKLAAKAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPG 254

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            LE Y GLHYPATDIPQAARFLFMKNKVR+ICDC AK VK+YQD KLPFDI+FCGSTLRAP
Sbjct: 255  LESYFGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAP 314

Query: 1150 HSCHLQYMENMNSIASLVMAVAVN---ESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            HSCHLQYMENMNSIASLVMAV VN   E G NE EE         RLWGLVVCHNESPRF
Sbjct: 315  HSCHLQYMENMNSIASLVMAVVVNEGEEDGGNEAEEN-SPPHRRKRLWGLVVCHNESPRF 373

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFLMQVFAIHV+KEFELEN ++EK I+RTQT+LCDMLL+E  P+GI+TQTP
Sbjct: 374  VPFPLRYACEFLMQVFAIHVNKEFELENLVKEKKIMRTQTMLCDMLLREFVPLGIITQTP 433

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NIMDLVKCDGAA LYQ+KIWRLG+ P+E QI DI +WL+  HM           +AGYPG
Sbjct: 434  NIMDLVKCDGAAFLYQDKIWRLGVTPSEPQIYDIVHWLSACHMDSTGLSTDNLHEAGYPG 493

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
             S+LGD  CGMA ARITSKD+LFWFRS  A+ +RWGGAKHD ADKDDGRRMHPRSSFKAF
Sbjct: 494  ISSLGDVVCGMAVARITSKDMLFWFRSPAAASIRWGGAKHDAADKDDGRRMHPRSSFKAF 553

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAV 260
            LEV K++S  W D+EM+AIHSLQLILR TLN    +  +  +D ++N+LKLEG+VE+  V
Sbjct: 554  LEVAKVRSLPWGDHEMNAIHSLQLILRDTLN---GIENKAIIDPQLNELKLEGMVEV--V 608

Query: 259  TNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVR 80
            TNEMVRLIETAT PILAVD DG++NGWN+KIA+LTGLS D+A GKHLL +VE+ S+D V+
Sbjct: 609  TNEMVRLIETATVPILAVDADGLINGWNMKIAQLTGLSDDEARGKHLLTIVEDSSIDVVK 668

Query: 79   RMLHLALQGKEEQNVQFQMKTYG 11
            RML LALQG EEQNVQFQ+KT G
Sbjct: 669  RMLLLALQGIEEQNVQFQVKTSG 691


>sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A gi|2664190|emb|CAA04679.1| phytochrome A
            [Populus tremula x Populus tremuloides]
          Length = 1125

 Score = 1040 bits (2690), Expect = 0.0
 Identities = 512/686 (74%), Positives = 589/686 (85%), Gaps = 3/686 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 1880
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKG 77

Query: 1879 KLIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 1700
            KLIQPFGCLLALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 1699 TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 1520
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 1519 LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1340
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1339 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1160
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1159 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D           RLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRF 377

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+P
Sbjct: 378  VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSP 436

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NIMDLVKCDGA L Y+NKIWRLG+ P++ Q++DIA+WL+E HM           DAGYPG
Sbjct: 437  NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
            A ALGD  CGMAA RITSKD+LFWFRS TA+E+RWGGAKH+P +KDDGRRMHPRSSFKAF
Sbjct: 497  ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLN-KQETLDSKINDLKLEGLVELQA 263
            LEVVK +S  W DYEMDAIHSLQLILR T  +   ++   +T+ ++++DLK+EG+ EL+A
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616

Query: 262  VTNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAV 83
            VT+EMVRLIETAT PILAVD+DG+VNGWN KI+ELTGL VDKAIGKHLL LVE+ SVD V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676

Query: 82   RRMLHLALQGKEEQNVQFQMKTYGPK 5
            +RML LALQGKEEQN+QF++KT+G K
Sbjct: 677  KRMLFLALQGKEEQNIQFEIKTHGSK 702


>gb|AEK26583.1| phytochrome A [Populus tremula]
          Length = 1109

 Score = 1040 bits (2690), Expect = 0.0
 Identities = 512/686 (74%), Positives = 589/686 (85%), Gaps = 3/686 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 1880
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKG 77

Query: 1879 KLIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 1700
            KLIQPFGCLLALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 1699 TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 1520
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 1519 LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1340
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1339 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1160
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1159 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D           RLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRF 377

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+P
Sbjct: 378  VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSP 436

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NIMDLVKCDGA L Y+NKIWRLG+ P++ Q++DIA+WL+E HM           DAGYPG
Sbjct: 437  NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
            A ALGD  CGMAA RITSKD+LFWFRS TA+E+RWGGAKH+P +KDDGRRMHPRSSFKAF
Sbjct: 497  ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLN-KQETLDSKINDLKLEGLVELQA 263
            LEVVK +S  W DYEMDAIHSLQLILR T  +   ++   +T+ ++++DLK+EG+ EL+A
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616

Query: 262  VTNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAV 83
            VT+EMVRLIETAT PILAVD+DG+VNGWN KI+ELTGL VDKAIGKHLL LVE+ SVD V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676

Query: 82   RRMLHLALQGKEEQNVQFQMKTYGPK 5
            +RML LALQGKEEQN+QF++KT+G K
Sbjct: 677  KRMLFLALQGKEEQNIQFEIKTHGSK 702


>gb|AEA50880.1| phyA [Populus tremula]
          Length = 958

 Score = 1040 bits (2690), Expect = 0.0
 Identities = 512/686 (74%), Positives = 589/686 (85%), Gaps = 3/686 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 1880
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKG 77

Query: 1879 KLIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 1700
            KLIQPFGCLLALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 1699 TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 1520
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 1519 LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1340
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1339 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1160
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1159 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D           RLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRF 377

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+P
Sbjct: 378  VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSP 436

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NIMDLVKCDGA L Y+NKIWRLG+ P++ Q++DIA+WL+E HM           DAGYPG
Sbjct: 437  NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
            A ALGD  CGMAA RITSKD+LFWFRS TA+E+RWGGAKH+P +KDDGRRMHPRSSFKAF
Sbjct: 497  ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLN-KQETLDSKINDLKLEGLVELQA 263
            LEVVK +S  W DYEMDAIHSLQLILR T  +   ++   +T+ ++++DLK+EG+ EL+A
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616

Query: 262  VTNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAV 83
            VT+EMVRLIETAT PILAVD+DG+VNGWN KI+ELTGL VDKAIGKHLL LVE+ SVD V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676

Query: 82   RRMLHLALQGKEEQNVQFQMKTYGPK 5
            +RML LALQGKEEQN+QF++KT+G K
Sbjct: 677  KRMLFLALQGKEEQNIQFEIKTHGSK 702


>ref|XP_002318913.1| phytochrome A family protein [Populus trichocarpa]
            gi|222857289|gb|EEE94836.1| phytochrome A family protein
            [Populus trichocarpa]
          Length = 1126

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 511/686 (74%), Positives = 587/686 (85%), Gaps = 3/686 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTA-YLQHIQKG 1880
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT  YL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKG 77

Query: 1879 KLIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 1700
            KLIQPFGCLLALDEK FKV+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 1699 TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 1520
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 1519 LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1340
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1339 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1160
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1159 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D           RLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRF 377

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+P
Sbjct: 378  VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSP 436

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NIMDLVKCDGA L Y+NKIWRLG+ P++ Q++DIA+WL+E HM           DAGYPG
Sbjct: 437  NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
            A ALGD  CGMAA RITSKD+LFWFRS TA+E+RWGGAKH+P +KDDGRRMHPRSSFKAF
Sbjct: 497  ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLN-KQETLDSKINDLKLEGLVELQA 263
            LEVVK +S  W DYEMDAIHSLQLILR    +   ++   +T+ ++++DLK+EG+ EL+A
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616

Query: 262  VTNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAV 83
            VT+EMVRLIETAT PILAVD+DG+VNGWN KI+ELTGL VDKAIGKHLL LVE+ SVD V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676

Query: 82   RRMLHLALQGKEEQNVQFQMKTYGPK 5
            +RML LALQGKEEQN+QF++KT+G K
Sbjct: 677  KRMLFLALQGKEEQNIQFEIKTHGSK 702


>gb|EXB57569.1| Phytochrome type A [Morus notabilis]
          Length = 1130

 Score = 1035 bits (2676), Expect = 0.0
 Identities = 510/686 (74%), Positives = 587/686 (85%), Gaps = 3/686 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 1880
            HSARIVAQTTVDAKL AEFEE G SFDYS S+     T  +++ RS+KVT AYL HIQKG
Sbjct: 18   HSARIVAQTTVDAKLHAEFEETGSSFDYSSSIRVSNSTSADQQPRSDKVTTAYLHHIQKG 77

Query: 1879 KLIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 1700
            KLIQPFGCLLALDEK  KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTLKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTAPS 137

Query: 1699 TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 1520
             +ALQKALGF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 1519 LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1340
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFH+DDHGEV +EIT
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVVSEIT 257

Query: 1339 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1160
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+I DC AK VK++QD+KLPFD+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVFQDEKLPFDLTLCGSTL 317

Query: 1159 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            RAPHSCHLQYM+NMNSIASLVMAV VNE  +++D           RLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMDNMNSIASLVMAVVVNEGDDDDDSPNSSQPQKRKRLWGLVVCHNTSPRF 377

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIV+Q+P
Sbjct: 378  VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVSQSP 436

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NIMDLVKCDGAALLY+NK+WRLG+ P++SQ+ DI  WL+E+HM           DAGYPG
Sbjct: 437  NIMDLVKCDGAALLYRNKVWRLGIAPSDSQLHDIVLWLSEHHMDSTGLSTDSLYDAGYPG 496

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
            A AL D  CGMAA RITSKD++FWFRSHTA+E++WGGAKH+P +KDDGR+MHPRSSFKAF
Sbjct: 497  AHALDDVICGMAAVRITSKDMIFWFRSHTAAEIQWGGAKHEPGEKDDGRKMHPRSSFKAF 556

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQE-TLDSKINDLKLEGLVELQA 263
            LEVVK +S  W DYEMDAIHSLQLILR    +   L+    T+++++ DLK EG+ EL+A
Sbjct: 557  LEVVKTRSFPWKDYEMDAIHSLQLILRNAFKDTEALDSNTMTINTRLTDLKFEGMQELEA 616

Query: 262  VTNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAV 83
            VT+EMVRLIETAT PILAVDIDG+VNGWN KI++LTGL V++AIG HLL LVE+ S + V
Sbjct: 617  VTSEMVRLIETATVPILAVDIDGVVNGWNTKISDLTGLPVEQAIGAHLLTLVEDSSTEVV 676

Query: 82   RRMLHLALQGKEEQNVQFQMKTYGPK 5
            R ML LALQGKEE+N+QF++KT+G +
Sbjct: 677  RVMLELALQGKEERNIQFEIKTHGSR 702


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1029 bits (2660), Expect = 0.0
 Identities = 505/685 (73%), Positives = 582/685 (84%), Gaps = 2/685 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGK 1877
            HSARI+AQTTVDAKL A+FEE G SFDYS SV        ++ RS+KVT AYL HIQKGK
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGK 77

Query: 1876 LIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPST 1697
            LIQPFG LLALDEK FKVIAYSENAPEMLTMVSH VPSVG+HP LGIGTDVR++F+ PS 
Sbjct: 78   LIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSA 137

Query: 1696 AALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGAL 1517
            +AL KALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGAL
Sbjct: 138  SALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGAL 197

Query: 1516 QSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITK 1337
            QSYKLAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITK
Sbjct: 198  QSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITK 257

Query: 1336 PGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLR 1157
            PGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK +++ QD+KLPFD+T CGSTLR
Sbjct: 258  PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLR 317

Query: 1156 APHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRFV 977
            APHSCH+QYMENMNSIASLVMAV VN+  E  +           RLWGLVVCH+ +PRFV
Sbjct: 318  APHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFV 377

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFAIHV+KE ELE+QI EKNILRTQTLLCDML+++ +P+GIV+Q+PN
Sbjct: 378  PFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRD-APLGIVSQSPN 436

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            +MDLVKCDGAALLY+NK+WRLG+ P++ Q+ DI  WL+E HM           DAGYPGA
Sbjct: 437  VMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGA 496

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
             ALGD  CGMAA +ITSKD LFWFRSHTA+EVRWGGAKH+P +KDDGR+MHPRSSFKAFL
Sbjct: 497  LALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFL 556

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLN-KQETLDSKINDLKLEGLVELQAV 260
            EVVK +S  W DYEMDAIHSLQLILR    ++  ++     + +K+NDLK+EG+ EL+AV
Sbjct: 557  EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAV 616

Query: 259  TNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVR 80
            T+EMVRLIETA+ PILAVD+DG+VNGWN KI+ELT L VDKAIG HLL LVE+ S D V+
Sbjct: 617  TSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVK 676

Query: 79   RMLHLALQGKEEQNVQFQMKTYGPK 5
            +MLHLALQG+EEQNVQF++KT+G K
Sbjct: 677  KMLHLALQGQEEQNVQFEIKTHGSK 701


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1028 bits (2657), Expect = 0.0
 Identities = 504/685 (73%), Positives = 582/685 (84%), Gaps = 2/685 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGK 1877
            HSARI+AQTTVDAKL A+FEE G SFDYS SV        ++ RS+KVT AYL HIQKGK
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGK 77

Query: 1876 LIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPST 1697
            LIQPFG LLALD+K FKVIAYSENAPEMLTMVSH VPSVG+HP LGIGTDVR++F+ PS 
Sbjct: 78   LIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSA 137

Query: 1696 AALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGAL 1517
            +AL KALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGAL
Sbjct: 138  SALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGAL 197

Query: 1516 QSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITK 1337
            QSYKLAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITK
Sbjct: 198  QSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITK 257

Query: 1336 PGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLR 1157
            PGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK +++ QD+KLPFD+T CGSTLR
Sbjct: 258  PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLR 317

Query: 1156 APHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRFV 977
            APHSCH+QYMENMNSIASLVMAV VN+  E  +           RLWGLVVCH+ +PRFV
Sbjct: 318  APHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFV 377

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFAIHV+KE ELE+QI EKNILRTQTLLCDML+++ +P+GIV+Q+PN
Sbjct: 378  PFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRD-APLGIVSQSPN 436

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            +MDLVKCDGAALLY+NK+WRLG+ P++ Q+ DI  WL+E HM           DAGYPGA
Sbjct: 437  VMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGA 496

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
             ALGD  CGMAA +ITSKD LFWFRSHTA+EVRWGGAKH+P +KDDGR+MHPRSSFKAFL
Sbjct: 497  LALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFL 556

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLN-KQETLDSKINDLKLEGLVELQAV 260
            EVVK +S  W DYEMDAIHSLQLILR    ++  ++     + +K+NDLK+EG+ EL+AV
Sbjct: 557  EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAV 616

Query: 259  TNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVR 80
            T+EMVRLIETA+ PILAVD+DG+VNGWN KI+ELT L VDKAIG HLL LVE+ S D V+
Sbjct: 617  TSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVK 676

Query: 79   RMLHLALQGKEEQNVQFQMKTYGPK 5
            +MLHLALQG+EEQNVQF++KT+G K
Sbjct: 677  KMLHLALQGQEEQNVQFEIKTHGSK 701


>ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citrus clementina]
            gi|568853345|ref|XP_006480323.1| PREDICTED: phytochrome
            A-like [Citrus sinensis] gi|557525879|gb|ESR37185.1|
            hypothetical protein CICLE_v10027712mg [Citrus
            clementina]
          Length = 1117

 Score = 1026 bits (2654), Expect = 0.0
 Identities = 511/686 (74%), Positives = 586/686 (85%), Gaps = 3/686 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 1880
            HSAR++AQTT+DAKL A+FE  G SFDYS SV       G+++ RS++VT AYL HIQKG
Sbjct: 18   HSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKG 77

Query: 1879 KLIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 1700
            KLIQPFGCLLALDEK FKVIAYSENAPE+LTMV+H VPSVGDHP LGIG+D++++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPS 137

Query: 1699 TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 1520
             +ALQKALGF EVSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 1519 LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1340
            LQSYKLAAKAI +LQSLP G+M+RLC+T+I+EVF+LTGYDRVM YKFH+DDHGEV +EIT
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEIT 257

Query: 1339 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1160
            K GLEPYLGLHYPATDIPQAARFLFMKNKVR+I DCRA+ VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTL 317

Query: 1159 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            RAPHSCHLQYMENMNSIASLVMAV VN   + E+E          RLWGLVVCHN +PRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFL QVFAIHV+KE ELE QI EKNILRTQTLLCDML+++ +P+GIVTQ+P
Sbjct: 375  VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD-APLGIVTQSP 433

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NIMDLVKCDGAALLY+NKIWRLG+ P + Q+ DI  WL+E HM           DAGYPG
Sbjct: 434  NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYPG 493

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
            A ALGD  CGMAA RI+ KD++FWFRS TASEVRWGGAKH+P +KDDGR+MHPRSSFKAF
Sbjct: 494  ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLN-KQETLDSKINDLKLEGLVELQA 263
            LEVVK +S  W DYEMDAIHSLQLILR    + G L+   +++ SK+ DLK+EG+ EL+A
Sbjct: 554  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613

Query: 262  VTNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAV 83
            VT+EMVRLIETAT PILAVD+DG+VNGWN KIAELTGLSVDKAIGKH L LVE+ S+D V
Sbjct: 614  VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673

Query: 82   RRMLHLALQGKEEQNVQFQMKTYGPK 5
            +RML+LALQG+EEQN+QF++KT+G K
Sbjct: 674  KRMLYLALQGQEEQNIQFEIKTHGSK 699


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score = 1026 bits (2652), Expect = 0.0
 Identities = 509/686 (74%), Positives = 584/686 (85%), Gaps = 3/686 (0%)
 Frame = -3

Query: 2053 HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 1880
            HSARI++QT VDAKL A+FEE G SFDYS SV     T  +   RS+KVT AYL HIQKG
Sbjct: 18   HSARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKG 77

Query: 1879 KLIQPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 1700
            KLIQPFGCLLALDEK +KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPS 137

Query: 1699 TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 1520
             +ALQKALGF +VSLLNPILVHCKTSGKPFYAIVHRVTG  IIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGA 197

Query: 1519 LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1340
            LQSYKLAAKAI++LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVT 257

Query: 1339 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1160
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+I DCRAK VK+ QD+KLP ++T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTL 317

Query: 1159 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDEETXXXXXXXXRLWGLVVCHNESPRF 980
            RAPHSCHLQYMENM+S+ASLVMAV VNE  E++D  T        RLWGLVVCHN +PRF
Sbjct: 318  RAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRF 377

Query: 979  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 800
            VPFPLRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDMLL++ +P+GI+TQ+P
Sbjct: 378  VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRD-APLGILTQSP 436

Query: 799  NIMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 620
            NI DLVKCDGAALLY+NKIWRLG+ P++ QIRDIA WL+E HM           DAGY  
Sbjct: 437  NITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSA 496

Query: 619  ASALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAF 440
            A +L D  CGMAA RITSKD+LFWFR+ TA+E+RWGGAKH+P +KDDGR+MHPRSSFKAF
Sbjct: 497  ALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAF 556

Query: 439  LEVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQ-ETLDSKINDLKLEGLVELQA 263
            LEVVK +S  W DYEMDAIHSLQLILR    +A  ++   + + S+++DLK+EG+ EL+A
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELEA 616

Query: 262  VTNEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAV 83
            VT+EMVRLIETAT PILAVD+DG+VNGWN KIAELTGL VDKAIGKHLL LVE+ S+D V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLV 676

Query: 82   RRMLHLALQGKEEQNVQFQMKTYGPK 5
            + ML  ALQGKEEQN+QF++KT+G K
Sbjct: 677  KNMLFSALQGKEEQNIQFEIKTHGSK 702


>sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a gi|1800215|gb|AAB41397.1| phytochrome A
            [Sorghum bicolor] gi|39777227|gb|AAR30883.1| phytochrome
            A [Sorghum bicolor]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
            gi|241917829|gb|EER90973.1| hypothetical protein
            SORBIDRAFT_01g009930 [Sorghum bicolor]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30887.1| phytochrome A [Sorghum bicolor]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30893.1| phytochrome A [Sorghum arundinaceum] gi|39777249|gb|AAR30894.1|
            phytochrome A [Sorghum arundinaceum]
            gi|39777257|gb|AAR30898.1| phytochrome A [Sorghum x
            drummondii]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30888.1| phytochrome A [Sorghum bicolor] gi|39777253|gb|AAR30896.1|
            phytochrome A [Sorghum arundinaceum]
            gi|39777255|gb|AAR30897.1| phytochrome A [Sorghum
            arundinaceum]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30889.1| phytochrome A [Sorghum bicolor] gi|39777245|gb|AAR30892.1|
            phytochrome A [Sorghum arundinaceum]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30890.1| phytochrome A [Sorghum arundinaceum]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30895.1| phytochrome A [Sorghum arundinaceum]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30891.1| phytochrome A [Sorghum arundinaceum]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705


>gb|AAR30884.1| phytochrome A [Sorghum bicolor]
          Length = 1131

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 506/684 (73%), Positives = 586/684 (85%), Gaps = 3/684 (0%)
 Frame = -3

Query: 2047 ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 1871
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81

Query: 1870 QPFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 1691
            QPFGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 1690 LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 1511
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 1510 YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1331
            YKLAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1330 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1151
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1150 HSCHLQYMENMNSIASLVMAVAVNESGENEDE--ETXXXXXXXXRLWGLVVCHNESPRFV 977
            HSCHLQYMENMNSIASLVMAV VNE+ E+++   E         RLWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381

Query: 976  PFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPN 797
            PFPLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PN
Sbjct: 382  PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441

Query: 796  IMDLVKCDGAALLYQNKIWRLGLVPTESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGA 617
            IMDLVKCDGAALLY +K+WRL   PTESQIRDIA+WL+E H            DAGYPGA
Sbjct: 442  IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501

Query: 616  SALGDDACGMAAARITSKDVLFWFRSHTASEVRWGGAKHDPADKDDGRRMHPRSSFKAFL 437
            ++LGD  CGMA A+ITSKD+LFWFRSHTA+E++WGGAKHDP+DKDD RRMHPR SFKAFL
Sbjct: 502  ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561

Query: 436  EVVKMKSSSWMDYEMDAIHSLQLILRGTLNEAGNLNKQETLDSKINDLKLEGLVELQAVT 257
            EVVKMKS  W DYEMDAIHSLQLILRGTLN+A    +   LD++I DLKL+GL ELQAVT
Sbjct: 562  EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621

Query: 256  NEMVRLIETATAPILAVDIDGIVNGWNLKIAELTGLSVDKAIGKHLLGLVEECSVDAVRR 77
            +EMVRL+ETAT PILAVD +G+VNGWN K+AEL+GL VD+AIG+H+L LVE+ SV  V+R
Sbjct: 622  SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681

Query: 76   MLHLALQGKEEQNVQFQMKTYGPK 5
            ML+LALQGKEE+ V+F++KT+G K
Sbjct: 682  MLYLALQGKEEKEVRFELKTHGSK 705