BLASTX nr result
ID: Zingiber25_contig00005352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00005352
(355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003563014.1| PREDICTED: uncharacterized protein LOC100845... 93 4e-17
ref|XP_006657769.1| PREDICTED: uncharacterized protein LOC102706... 89 5e-16
gb|EEC82160.1| hypothetical protein OsI_26228 [Oryza sativa Indi... 89 5e-16
ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [S... 87 2e-15
ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group] g... 87 2e-15
ref|XP_003563128.1| PREDICTED: uncharacterized protein LOC100828... 87 3e-15
ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group] g... 86 5e-15
gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indi... 86 5e-15
ref|XP_004975037.1| PREDICTED: uncharacterized protein LOC101765... 86 7e-15
gb|AFW68520.1| succinate dehydrogenase subunit 3 [Zea mays] 85 9e-15
ref|NP_001149724.1| succinate dehydrogenase subunit 3 [Zea mays]... 85 9e-15
gb|AAP80640.1|AF475119_1 succinate dehydrogenase subunit 3, part... 84 2e-14
ref|XP_004957880.1| PREDICTED: uncharacterized protein LOC101764... 83 4e-14
ref|XP_004957879.1| PREDICTED: uncharacterized protein LOC101764... 83 4e-14
dbj|BAK00145.1| predicted protein [Hordeum vulgare subsp. vulgare] 83 4e-14
dbj|BAJ84798.1| predicted protein [Hordeum vulgare subsp. vulgare] 83 4e-14
ref|XP_006646804.1| PREDICTED: uncharacterized protein LOC102712... 82 6e-14
ref|NP_001147745.1| LOC100281355 [Zea mays] gi|195605110|gb|ACG2... 79 6e-13
>ref|XP_003563014.1| PREDICTED: uncharacterized protein LOC100845567 [Brachypodium
distachyon]
Length = 129
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
QP IS G RS+H +R L+ +NRPLSPHLPLKKPQL ATFSISHRIFG +L +A
Sbjct: 58 QPKISQSGSRSLHTSRPLAAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGVALGAA 113
Query: 269 ILLIPIAWKFSLLLDV 316
I+ IP+A KFSL+ DV
Sbjct: 114 IISIPLATKFSLMFDV 129
>ref|XP_006657769.1| PREDICTED: uncharacterized protein LOC102706021 [Oryza brachyantha]
Length = 129
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P +S G R +H +R LS +NRPLSPHLPLKKPQL ATFSISHRIFGA+L +
Sbjct: 58 RPKMSPSGTRPLHTSRPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAV 113
Query: 269 ILLIPIAWKFSLLLDV 316
I+ IP+A KFSL+ DV
Sbjct: 114 IISIPLATKFSLMFDV 129
>gb|EEC82160.1| hypothetical protein OsI_26228 [Oryza sativa Indica Group]
Length = 129
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P +S G R +H +R LS +NRPLSPHLPLKKPQL ATFSISHRIFGA+L +
Sbjct: 58 RPKMSPSGNRLLHTSRPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAV 113
Query: 269 ILLIPIAWKFSLLLDV 316
I+ IP+A KFSL+ DV
Sbjct: 114 IISIPLATKFSLMFDV 129
>ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [Sorghum bicolor]
gi|241938637|gb|EES11782.1| hypothetical protein
SORBIDRAFT_06g001280 [Sorghum bicolor]
Length = 117
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +2
Query: 62 HGSSFMVEPQPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHR 241
+ SS + +P IS G R +H +R LS +NRPLSPHLPLKKPQ ATFSISHR
Sbjct: 37 YASSPLAAQRPKISAPGSRPLHTSRPLSSPV----ANRPLSPHLPLKKPQFSATFSISHR 92
Query: 242 IFGASLTSAILLIPIAWKFSLLLDV 316
IFG +L AI+ +P+A KFSL+ V
Sbjct: 93 IFGVALGVAIISVPLATKFSLMFGV 117
>ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group]
gi|14861490|gb|AAK73695.1|AF362742_1 succinate
dehydrogenase subunit 3 [Oryza sativa]
gi|34393293|dbj|BAC83222.1| succinate dehydrogenase
subunit 3 [Oryza sativa Japonica Group]
gi|113611342|dbj|BAF21720.1| Os07g0521000 [Oryza sativa
Japonica Group] gi|125600467|gb|EAZ40043.1| hypothetical
protein OsJ_24481 [Oryza sativa Japonica Group]
gi|215765011|dbj|BAG86708.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 129
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P + G R +H +R LS +NRPLSPHLPLKKPQL ATFSISHRIFGA+L +
Sbjct: 58 RPKMFPSGNRLLHTSRPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAV 113
Query: 269 ILLIPIAWKFSLLLDV 316
I+ IP+A KFSL+ DV
Sbjct: 114 IISIPLATKFSLMFDV 129
>ref|XP_003563128.1| PREDICTED: uncharacterized protein LOC100828671 [Brachypodium
distachyon]
Length = 129
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +2
Query: 98 ISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSAILL 277
+S RS+H +R+LS G +NRPLSPHLPLKKPQL ATFSISHRIFG +L +AI+
Sbjct: 61 VSPSESRSLHASRSLS----GPVANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIIS 116
Query: 278 IPIAWKFSLLLDV 316
+P A +FSL+ DV
Sbjct: 117 VPFATEFSLMFDV 129
>ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group]
gi|14861488|gb|AAK73694.1| succinate dehydrogenase
subunit 3 [Oryza sativa] gi|41052751|dbj|BAD07607.1|
succinate dehydrogenase subunit 3 [Oryza sativa Japonica
Group] gi|113535252|dbj|BAF07635.1| Os02g0121800 [Oryza
sativa Japonica Group] gi|215737053|dbj|BAG95982.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222622073|gb|EEE56205.1| hypothetical protein
OsJ_05172 [Oryza sativa Japonica Group]
Length = 129
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P + G R +H + LS +NRPLSPHLPLKKPQL ATFSISHRIFGA+L +A
Sbjct: 58 RPKMLPSGCRPLHTSHPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAA 113
Query: 269 ILLIPIAWKFSLLLDV 316
I+ IP+A KFSL+ DV
Sbjct: 114 IISIPLATKFSLMFDV 129
>gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indica Group]
Length = 168
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P + G R +H + LS +NRPLSPHLPLKKPQL ATFSISHRIFGA+L +A
Sbjct: 97 RPKMLPSGCRPLHTSHPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAA 152
Query: 269 ILLIPIAWKFSLLLDV 316
I+ IP+A KFSL+ DV
Sbjct: 153 IISIPLATKFSLMFDV 168
>ref|XP_004975037.1| PREDICTED: uncharacterized protein LOC101765081 [Setaria italica]
Length = 117
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +2
Query: 68 SSFMVEPQPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIF 247
SS + +P +S G RS+H +R L+ +NRPLSPHLPLKKPQ ATFSISHRIF
Sbjct: 39 SSPLAALRPNMSAPGSRSLHTSRPLAAPV----ANRPLSPHLPLKKPQFSATFSISHRIF 94
Query: 248 GASLTSAILLIPIAWKFSLLLDV 316
G +L AI+ +P+A KFSL+ V
Sbjct: 95 GVALGVAIISVPLATKFSLMFGV 117
>gb|AFW68520.1| succinate dehydrogenase subunit 3 [Zea mays]
Length = 117
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +2
Query: 68 SSFMVEPQPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIF 247
SS + +P +ST G R +H + LS A +NRPLSPHLPLKKPQ ATFSISHRIF
Sbjct: 39 SSPVAALRPKMSTPGNRLLHTSCPLSSAV----ANRPLSPHLPLKKPQFSATFSISHRIF 94
Query: 248 GASLTSAILLIPIAWKFSLLLDV 316
G +L AI+ +P+A KFSL+ V
Sbjct: 95 GVALGVAIISVPLATKFSLMFGV 117
>ref|NP_001149724.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195605954|gb|ACG24807.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|195629790|gb|ACG36536.1|
succinate dehydrogenase subunit 3 [Zea mays]
Length = 117
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +2
Query: 68 SSFMVEPQPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIF 247
SS + +P +ST G R +H + LS A +NRPLSPHLPLKKPQ ATFSISHRIF
Sbjct: 39 SSPVAALRPKMSTPGNRLLHTSCPLSSAV----ANRPLSPHLPLKKPQFSATFSISHRIF 94
Query: 248 GASLTSAILLIPIAWKFSLLLDV 316
G +L AI+ +P+A KFSL+ V
Sbjct: 95 GVALGVAIISVPLATKFSLMFGV 117
>gb|AAP80640.1|AF475119_1 succinate dehydrogenase subunit 3, partial [Triticum aestivum]
Length = 132
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = +2
Query: 110 GRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSAILLIPIA 289
G RS+H +R LS +NRPLSPHLPLKKPQL ATFSISHRIFGA+L +AI+ IP+A
Sbjct: 68 GNRSLHTSRPLSTPV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPLA 123
Query: 290 WKFSLLLDV 316
+F ++ +V
Sbjct: 124 TRFGVMFEV 132
>ref|XP_004957880.1| PREDICTED: uncharacterized protein LOC101764948 isoform X2 [Setaria
italica]
Length = 117
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P + GRR +H + LS +NRPLSPHLPLKKPQL ATFSISHRIFG +L A
Sbjct: 46 RPKVPPSGRRPLHTSGPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGVALGVA 101
Query: 269 ILLIPIAWKFSLLLDV 316
I+ +P+A KFS++ V
Sbjct: 102 IISVPLATKFSIMFGV 117
>ref|XP_004957879.1| PREDICTED: uncharacterized protein LOC101764948 isoform X1 [Setaria
italica]
Length = 119
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P + GRR +H + LS +NRPLSPHLPLKKPQL ATFSISHRIFG +L A
Sbjct: 48 RPKVPPSGRRPLHTSGPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGVALGVA 103
Query: 269 ILLIPIAWKFSLLLDV 316
I+ +P+A KFS++ V
Sbjct: 104 IISVPLATKFSIMFGV 119
>dbj|BAK00145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +2
Query: 110 GRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSAILLIPIA 289
G RS+H +R LS +NRPLSPHLPLKKPQL ATFSISHRIFG +L +AI+ IP+A
Sbjct: 54 GNRSLHTSRPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISIPLA 109
Query: 290 WKFSLLLDV 316
+F ++ +V
Sbjct: 110 TRFGVMFEV 118
>dbj|BAJ84798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 129
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +2
Query: 110 GRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSAILLIPIA 289
G RS+H +R LS +NRPLSPHLPLKKPQL ATFSISHRIFG +L +AI+ IP+A
Sbjct: 65 GNRSLHTSRPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISIPLA 120
Query: 290 WKFSLLLDV 316
+F ++ +V
Sbjct: 121 TRFGVMFEV 129
>ref|XP_006646804.1| PREDICTED: uncharacterized protein LOC102712499 [Oryza brachyantha]
Length = 129
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = +2
Query: 89 QPTISTYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSA 268
+P + G R++H +R LS +NRPLSPHLPLKKPQ+ AT SISHRI GA+L +A
Sbjct: 58 RPKMLPSGCRTLHTSRPLSAPV----ANRPLSPHLPLKKPQMSATLSISHRIVGAALGAA 113
Query: 269 ILLIPIAWKFSLLLDV 316
I+ IP+A KFSL+ DV
Sbjct: 114 IVSIPLATKFSLMFDV 129
>ref|NP_001147745.1| LOC100281355 [Zea mays] gi|195605110|gb|ACG24385.1| succinate
dehydrogenase subunit 3 [Zea mays]
gi|195605432|gb|ACG24546.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|195613432|gb|ACG28546.1|
succinate dehydrogenase subunit 3 [Zea mays]
gi|195618284|gb|ACG30972.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|195619232|gb|ACG31446.1|
succinate dehydrogenase subunit 3 [Zea mays]
gi|195641204|gb|ACG40070.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|224032159|gb|ACN35155.1| unknown
[Zea mays] gi|414870914|tpg|DAA49471.1| TPA: Succinate
dehydrogenase subunit 3 isoform 1 [Zea mays]
gi|414870915|tpg|DAA49472.1| TPA: Succinate
dehydrogenase subunit 3 isoform 2 [Zea mays]
gi|414870916|tpg|DAA49473.1| TPA: Succinate
dehydrogenase subunit 3 isoform 3 [Zea mays]
gi|414870917|tpg|DAA49474.1| TPA: Succinate
dehydrogenase subunit 3 isoform 4 [Zea mays]
gi|414870918|tpg|DAA49475.1| TPA: Succinate
dehydrogenase subunit 3 isoform 5 [Zea mays]
gi|414870919|tpg|DAA49476.1| TPA: Succinate
dehydrogenase subunit 3 isoform 6 [Zea mays]
Length = 118
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/72 (58%), Positives = 50/72 (69%)
Frame = +2
Query: 101 STYGRRSIHVTRTLSEATRGVASNRPLSPHLPLKKPQLRATFSISHRIFGASLTSAILLI 280
ST G R +H + LS +NRPLSPHLPLKKPQ ATFSISHRIFG +L AI+ +
Sbjct: 51 STTGNRLLHSSCPLSSPV----ANRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIVSV 106
Query: 281 PIAWKFSLLLDV 316
P+A KFSL+ V
Sbjct: 107 PLATKFSLMFGV 118