BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00005200
         (1533 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   591   e-166
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   587   e-165
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   583   e-164
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...   583   e-164
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...   574   e-161
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [...   573   e-161
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   573   e-161
tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   573   e-161
gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japo...   566   e-159
gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family ...   566   e-159
gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5...   566   e-159
ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA...   566   e-159
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub...   565   e-158
gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indi...   565   e-158
gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus pe...   565   e-158
ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymer...   563   e-158
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   563   e-158
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub...   563   e-158
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   563   e-158
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   562   e-157

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  591 bits (1524), Expect = e-166
 Identities = 297/422 (70%), Positives = 339/422 (80%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLA-KKHETDRIQEIFA 179
            TGTNAIVAVLAY+GYDMEDAMILNKSSVDRGL  G IYQTE+IDL+ + +++DR Q +F 
Sbjct: 721  TGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFR 780

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            RSN D++    IDSDGLPYVGQM++P EP  S +N +TS+T+ T LKGSE  I+DYV++D
Sbjct: 781  RSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALD 840

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
               +K + QKVNIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRPDLII
Sbjct: 841  AK-NKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLII 899

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSLHGKFVDATPF  S                   LG 
Sbjct: 900  NPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS-LRKANGEAGSESSSLVDELGS 958

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            MLT+YGFNYHGVEV++SG YGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQ
Sbjct: 959  MLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQ 1018

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGAAYLLHDRLH+CSD+HIADVCS CGS+L+ +IIQP
Sbjct: 1019 PIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQP 1078

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            QK++ REI GLPP R PK   C AC+TSKGMETV+MPY+F++LAAE  AMNIKM LQL +
Sbjct: 1079 QKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSN 1138

Query: 1260 QA 1265
             A
Sbjct: 1139 GA 1140


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  587 bits (1514), Expect = e-165
 Identities = 294/422 (69%), Positives = 335/422 (79%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFA 179
            TGTNAIVAVLAYTGYDMEDAMILNKSSV+RG+  G IYQTE+IDL+++   +DR Q +F 
Sbjct: 737  TGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFR 796

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            RSN D+++   IDSDGLPYVGQM+HP EP  S +N +T+TT+    KGS+  I+DYV++D
Sbjct: 797  RSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAID 856

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
             T +K +LQKVNIR R  R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRPDLII
Sbjct: 857  -TKNKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLII 915

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPF  S  N                LG 
Sbjct: 916  NPHAFPSRMTIAMLLESLAAKGGSLNGKFVDATPFTSSVKNVNGGEAKSESESLVDDLGN 975

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            ML ++GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ
Sbjct: 976  MLRSHGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 1035

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERDA+LAHGAAYLLHDRLH+CSDYHIADVCS CGS+L+ + IQ 
Sbjct: 1036 PIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQT 1095

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            QK+  R+I GLPP   PK   C +C+TSKGMETVAMPYVF+YLAAE  AMNIKM++QL  
Sbjct: 1096 QKRVVRDIGGLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLAAELAAMNIKMNVQLSG 1155

Query: 1260 QA 1265
             A
Sbjct: 1156 GA 1157


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  583 bits (1503), Expect = e-164
 Identities = 293/423 (69%), Positives = 329/423 (77%), Gaps = 1/423 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFA 179
            TGTNAIVAVLAYTGYDMEDAMILNKSSVDRG+  G IYQTE+IDL+   ++ DR Q++F 
Sbjct: 752  TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFR 811

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            R+   +++   IDSDGLPYVGQM+HP EP  S ++  T++ +    KGSE   +DYV+VD
Sbjct: 812  RNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVD 871

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
               SKN  QK NIR R TR PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRPDLII
Sbjct: 872  MKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLII 931

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSLHGKF+DATPF  S                   LG 
Sbjct: 932  NPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGE 991

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            ML   GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQITRQ
Sbjct: 992  MLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQ 1051

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGAAYLLHDRLH+CSDYH+ADVCS CGSVL+AT I P
Sbjct: 1052 PIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHP 1111

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            QK++ REI GLPPAR PK   C AC+TSKGMETVAMPYVF+YLAAE  AMNIK+ LQL  
Sbjct: 1112 QKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGD 1171

Query: 1260 QAS 1268
             A+
Sbjct: 1172 GAT 1174


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score =  583 bits (1503), Expect = e-164
 Identities = 293/423 (69%), Positives = 329/423 (77%), Gaps = 1/423 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFA 179
            TGTNAIVAVLAYTGYDMEDAMILNKSSVDRG+  G IYQTE+IDL+   ++ DR Q++F 
Sbjct: 659  TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFR 718

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            R+   +++   IDSDGLPYVGQM+HP EP  S ++  T++ +    KGSE   +DYV+VD
Sbjct: 719  RNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVD 778

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
               SKN  QK NIR R TR PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRPDLII
Sbjct: 779  MKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLII 838

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSLHGKF+DATPF  S                   LG 
Sbjct: 839  NPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGE 898

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            ML   GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQITRQ
Sbjct: 899  MLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQ 958

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGAAYLLHDRLH+CSDYH+ADVCS CGSVL+AT I P
Sbjct: 959  PIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHP 1018

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            QK++ REI GLPPAR PK   C AC+TSKGMETVAMPYVF+YLAAE  AMNIK+ LQL  
Sbjct: 1019 QKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGD 1078

Query: 1260 QAS 1268
             A+
Sbjct: 1079 GAT 1081


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  574 bits (1479), Expect = e-161
 Identities = 292/422 (69%), Positives = 330/422 (78%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAK-KHETDRIQEIFA 179
            +GTNAIVAVLAYTGYDMEDAMILNKSSV+RG+  G IYQTE+IDL   K ++DR Q IF 
Sbjct: 759  SGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLGDDKSKSDRGQRIFK 818

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            R ++DR++   +DSDGLP+VGQ++ P EP  ST N +T++ +    KGSE  I+DYV+VD
Sbjct: 819  REHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQVTNSKRLYNHKGSETVIVDYVAVD 878

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
             T SK +LQK NIR R  R P+IGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRPDLII
Sbjct: 879  -TKSKKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLII 937

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSLHGKFVDATPF  S                   LG 
Sbjct: 938  NPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS-VKEAKGKTEAESESLVDELGS 996

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            ML A GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDK+QVR+TG VDQITRQ
Sbjct: 997  MLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRATGQVDQITRQ 1056

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERDA+LAHGAAYLLHDRLH+CSDYHIADVCS CGS+L+ +I+QP
Sbjct: 1057 PIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSIVQP 1116

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
             K+  REI GLPPAR PK   C AC+TSKGMETVAMPYVF+YLAAE  AMNI M +QL S
Sbjct: 1117 PKRVVREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNITMTIQLNS 1176

Query: 1260 QA 1265
             A
Sbjct: 1177 GA 1178


>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1117

 Score =  573 bits (1478), Expect = e-161
 Identities = 293/422 (69%), Positives = 330/422 (78%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFA 179
            TGTNAIVAVLAYTGYDMEDAMILNKSSVDRG+  G IYQTE+IDL+ +   +DR    F 
Sbjct: 698  TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMFHGQIYQTETIDLSDEGSRSDRSHRRFR 757

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            RSNTDR+    IDSDGLPYVGQ+++P EP  S +N +T+T+KP   KGSE AI+DYV+VD
Sbjct: 758  RSNTDRSSHSLIDSDGLPYVGQIINPNEPYCSIYNDITNTSKPKYRKGSEPAIVDYVAVD 817

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
             T SK +LQKVNIR R  R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRPDLII
Sbjct: 818  -TKSKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLII 876

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSL+G FVDATPF  +                   LG 
Sbjct: 877  NPHAFPSRMTIAMLLESLAAKGGSLNGNFVDATPFASTVRASNAGEAKSEPESLVDELGK 936

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            ML + GFN+HGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTG VDQITRQ
Sbjct: 937  MLKSKGFNHHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGPVDQITRQ 996

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS CGS+L+ T  QP
Sbjct: 997  PIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSILT-THYQP 1055

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            Q++  R+I GLPP + PK  +C AC+TSKG+ETVAMPYVF+YLAAE  AMNIKM L L  
Sbjct: 1056 QRRIVRDIGGLPPVKAPKKVVCHACQTSKGIETVAMPYVFRYLAAELAAMNIKMTLHLND 1115

Query: 1260 QA 1265
             A
Sbjct: 1116 GA 1117


>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1162

 Score =  573 bits (1477), Expect = e-161
 Identities = 289/423 (68%), Positives = 333/423 (78%), Gaps = 2/423 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+V+RG+ RGHIYQTE IDL+ K   D + E FA+
Sbjct: 739  SGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTECIDLSTKSR-DNVPETFAK 797

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            S   R+    IDSDGLP +GQ VHP E  YS HN+LT+  +P  LKG+E A IDYV+V+G
Sbjct: 798  SILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVHNSLTNVIRPVKLKGTEPAFIDYVAVNG 857

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            TGSK  LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 858  TGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 917

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLES+AAK GSLHGKF+DATPF  S                   LGPM
Sbjct: 918  PHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANS---LKKDKDSDKPNSIVDELGPM 974

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHG EV++SGV+GTE+ CEIFIGPVYYQRLRHMVSDKFQVR+TG +DQITRQP
Sbjct: 975  LASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQITRQP 1034

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQ-- 1076
                         EMERDA+LAHG++YLLHDRLHSCSDYHIADVCS+CGS+L+AT+I+  
Sbjct: 1035 IGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSFCGSLLTATMIKSD 1094

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             QKK   E+ GLP  R  K++ CQACKTSKGMETVAMPYVF+YLAAE  AMNIK++L+L 
Sbjct: 1095 TQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVAMPYVFRYLAAELAAMNIKLELRLS 1154

Query: 1257 SQA 1265
            +++
Sbjct: 1155 NKS 1157


>tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1128

 Score =  573 bits (1477), Expect = e-161
 Identities = 289/423 (68%), Positives = 333/423 (78%), Gaps = 2/423 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+V+RG+ RGHIYQTE IDL+ K   D + E FA+
Sbjct: 705  SGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTECIDLSTKSR-DNVPETFAK 763

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            S   R+    IDSDGLP +GQ VHP E  YS HN+LT+  +P  LKG+E A IDYV+V+G
Sbjct: 764  SILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVHNSLTNVIRPVKLKGTEPAFIDYVAVNG 823

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            TGSK  LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 824  TGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 883

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLES+AAK GSLHGKF+DATPF  S                   LGPM
Sbjct: 884  PHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANS---LKKDKDSDKPNSIVDELGPM 940

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHG EV++SGV+GTE+ CEIFIGPVYYQRLRHMVSDKFQVR+TG +DQITRQP
Sbjct: 941  LASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQITRQP 1000

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQ-- 1076
                         EMERDA+LAHG++YLLHDRLHSCSDYHIADVCS+CGS+L+AT+I+  
Sbjct: 1001 IGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSFCGSLLTATMIKSD 1060

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             QKK   E+ GLP  R  K++ CQACKTSKGMETVAMPYVF+YLAAE  AMNIK++L+L 
Sbjct: 1061 TQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVAMPYVFRYLAAELAAMNIKLELRLS 1120

Query: 1257 SQA 1265
            +++
Sbjct: 1121 NKS 1123


>gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group]
          Length = 1150

 Score =  567 bits (1460), Expect = e-159
 Identities = 282/422 (66%), Positives = 330/422 (78%), Gaps = 2/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+VDRG+ RGHI+QTE IDL+ K   D + E F +
Sbjct: 727  SGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKSR-DNVTEFFCK 785

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            SN  R+   +I+SDGLP +G+ + P E  YS  N LT T +P  LKGSE A IDYV+V+G
Sbjct: 786  SNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNG 845

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            T  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 846  TNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 905

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S                   LGPM
Sbjct: 906  PHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKERSNSIVDELGPM 957

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQITRQP
Sbjct: 958  LASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQP 1017

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATII--Q 1076
                         EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS CGS+L+AT+I  +
Sbjct: 1018 IGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSE 1077

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             QKK+ R++ GLP  + PK++ CQACKTSKGMETVAMPYVF+YLA+E  AMNIK++L+L 
Sbjct: 1078 SQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAMNIKLELRLS 1137

Query: 1257 SQ 1262
            ++
Sbjct: 1138 NR 1139


>gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1044

 Score =  567 bits (1460), Expect = e-159
 Identities = 282/422 (66%), Positives = 330/422 (78%), Gaps = 2/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+VDRG+ RGHI+QTE IDL+ K   D + E F +
Sbjct: 621  SGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKSR-DNVTEFFCK 679

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            SN  R+   +I+SDGLP +G+ + P E  YS  N LT T +P  LKGSE A IDYV+V+G
Sbjct: 680  SNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNG 739

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            T  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 740  TNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 799

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S                   LGPM
Sbjct: 800  PHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKERSNSIVDELGPM 851

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQITRQP
Sbjct: 852  LASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQP 911

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATII--Q 1076
                         EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS CGS+L+AT+I  +
Sbjct: 912  IGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSE 971

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             QKK+ R++ GLP  + PK++ CQACKTSKGMETVAMPYVF+YLA+E  AMNIK++L+L 
Sbjct: 972  SQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAMNIKLELRLS 1031

Query: 1257 SQ 1262
            ++
Sbjct: 1032 NR 1033


>gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5'-partial [Oryza
            sativa Japonica Group]
          Length = 855

 Score =  567 bits (1460), Expect = e-159
 Identities = 282/422 (66%), Positives = 330/422 (78%), Gaps = 2/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+VDRG+ RGHI+QTE IDL+ K   D + E F +
Sbjct: 432  SGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKSR-DNVTEFFCK 490

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            SN  R+   +I+SDGLP +G+ + P E  YS  N LT T +P  LKGSE A IDYV+V+G
Sbjct: 491  SNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNG 550

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            T  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 551  TNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 610

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S                   LGPM
Sbjct: 611  PHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKERSNSIVDELGPM 662

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQITRQP
Sbjct: 663  LASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQP 722

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATII--Q 1076
                         EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS CGS+L+AT+I  +
Sbjct: 723  IGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSE 782

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             QKK+ R++ GLP  + PK++ CQACKTSKGMETVAMPYVF+YLA+E  AMNIK++L+L 
Sbjct: 783  SQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAMNIKLELRLS 842

Query: 1257 SQ 1262
            ++
Sbjct: 843  NR 844


>ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA-directed RNA polymerase
            I subunit RPA2-like [Setaria italica]
          Length = 1172

 Score =  566 bits (1459), Expect = e-159
 Identities = 288/431 (66%), Positives = 333/431 (77%), Gaps = 10/431 (2%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVLAYTGYDMEDAMILNKS+VDRG+ RGHIYQTE IDL+KK+  + + EIFA+
Sbjct: 738  SGTNAIVAVLAYTGYDMEDAMILNKSAVDRGMFRGHIYQTECIDLSKKNR-ENVPEIFAK 796

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            S   R+   +IDSDGLP +GQ VHP E  YS +N LT   +P  LKG+E A IDYV+V+G
Sbjct: 797  SVLSRDTSTAIDSDGLPRLGQTVHPNEQYYSVYNRLTGAIRPVRLKGTEPAFIDYVAVNG 856

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
              SK   QK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 857  ASSKGDFQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 916

Query: 543  PHAFPSRMTIGMLLESIAAK--------GGSLHGKFVDATPFPRSNCNXXXXXXXXXXXX 698
            PHAFPSRMTI MLLES+AAK         GSLHGKF+DATPF  S               
Sbjct: 917  PHAFPSRMTIAMLLESMAAKVQIFTSLIAGSLHGKFMDATPFASS---VKKEGGSPXPDS 973

Query: 699  XXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT 878
                LGPML +YGFNYHG E ++SG +GTE+ CEIFIGPVYYQRLRHMVSDKFQVR+TG 
Sbjct: 974  IVDELGPMLASYGFNYHGTETLYSGFFGTEMDCEIFIGPVYYQRLRHMVSDKFQVRTTGR 1033

Query: 879  VDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVL 1058
            +DQITRQP             EMERDA+LAHG++YLLHDRLHSCSDYHIADVCS+CGS+L
Sbjct: 1034 IDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSFCGSLL 1093

Query: 1059 SATIIQ--PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMN 1232
            +AT+I+   QKK+ RE+ GLP  R  K++ CQACKTSKGMETVAMPYVF+YLAAE  AMN
Sbjct: 1094 TATVIKSDTQKKAKREMLGLPTVRPQKNFACQACKTSKGMETVAMPYVFRYLAAELAAMN 1153

Query: 1233 IKMDLQLRSQA 1265
            IK++L+L +++
Sbjct: 1154 IKLELRLSNKS 1164


>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
            distachyon]
          Length = 1181

 Score =  565 bits (1457), Expect = e-158
 Identities = 286/422 (67%), Positives = 330/422 (78%), Gaps = 2/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+VDRG+ RG IYQTE IDL+       + EIFA+
Sbjct: 756  SGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIYQTECIDLSTTRRGS-VAEIFAK 814

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            S+  R+    IDSDGLP VG+ + P E  YST+NTLT   +PT LKG+E A IDYV+V+G
Sbjct: 815  SSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTYNTLTGAIRPTRLKGTEPAAIDYVAVNG 874

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            T SK  LQKVNIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 875  TNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 934

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLESIAAK GSLHG FVDATPF  S                   +GPM
Sbjct: 935  PHAFPSRMTIAMLLESIAAKAGSLHGNFVDATPFASS--VKEGDGNPWKPKSIVDEMGPM 992

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHGVEV++SG++GTELTCEIFIGPVYYQRLRHMVSDKFQVR+TG +DQ+TRQP
Sbjct: 993  LASYGFNYHGVEVLYSGLFGTELTCEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQVTRQP 1052

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATII--Q 1076
                         EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS CGS+L+AT+I  +
Sbjct: 1053 IGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSLCGSLLTATVIKSE 1112

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             Q KS R + G+   + PK+  CQAC+T+KGMETVAMPYVF+YLAAE  AMN+K+DL+L 
Sbjct: 1113 TQMKSKRNMLGVQTVKPPKNLACQACQTNKGMETVAMPYVFRYLAAELAAMNVKLDLRLS 1172

Query: 1257 SQ 1262
            ++
Sbjct: 1173 NR 1174


>gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indica Group]
          Length = 1086

 Score =  565 bits (1457), Expect = e-158
 Identities = 281/422 (66%), Positives = 330/422 (78%), Gaps = 2/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+VDRG+ RGHI+QTE IDL+ K   D + E F +
Sbjct: 663  SGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKSR-DNVTEFFCK 721

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            SN  R+   +I+SDGLP +G+ + P E  YS  N LT T +P  LKGSE A IDYV+V+G
Sbjct: 722  SNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNG 781

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            T  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 782  TNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 841

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S                   LGPM
Sbjct: 842  PHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKERSNSIVDELGPM 893

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQITRQP
Sbjct: 894  LASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQP 953

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATII--Q 1076
                         EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS CGS+L+AT+I  +
Sbjct: 954  IGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSE 1013

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             QKK+ R++ GLP  + PK++ CQACKTS+GMETVAMPYVF+YLA+E  AMNIK++L+L 
Sbjct: 1014 SQKKAKRDMLGLPTVKPPKNFACQACKTSRGMETVAMPYVFRYLASELAAMNIKLELRLS 1073

Query: 1257 SQ 1262
            ++
Sbjct: 1074 NR 1075


>gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus persica]
          Length = 1037

 Score =  565 bits (1456), Expect = e-158
 Identities = 284/422 (67%), Positives = 327/422 (77%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLA-KKHETDRIQEIFA 179
            TGTNAIVAVL+YTGYDMEDAMILNKSSVDRG+  G IYQTE+IDL+ +K  +DR ++ F 
Sbjct: 623  TGTNAIVAVLSYTGYDMEDAMILNKSSVDRGMFHGLIYQTETIDLSDQKSRSDRSRKFFR 682

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            RSN ++N   SIDSDGLPYVGQ + P E LYS HN +T+ ++    KGSE  I+DYV++D
Sbjct: 683  RSNINKNS--SIDSDGLPYVGQTIKPNEELYSIHNEVTNESRSIKHKGSEPVIVDYVAID 740

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
            G   K  LQK +IR R  R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRPDLII
Sbjct: 741  G---KKLLQKASIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLII 797

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSLHGK+VDATPF  +N                  LG 
Sbjct: 798  NPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPF--ANSKNVNEETPPQSKTLVDELGE 855

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            ML   GFNYHG EVM+SGVYGTELTCEIF+GPVYYQRLRHMVSDK+QVRSTGT+DQIT Q
Sbjct: 856  MLKVKGFNYHGTEVMYSGVYGTELTCEIFMGPVYYQRLRHMVSDKYQVRSTGTIDQITHQ 915

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS CGS+L+ + ++P
Sbjct: 916  PIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSILTTSFVKP 975

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            +++  R + GLPP R  K  IC AC+TS+GMETVAMPYVFKYLAAE  AMNIK+ LQL +
Sbjct: 976  ERRVGRAVKGLPPIRASKKVICHACQTSRGMETVAMPYVFKYLAAELAAMNIKLTLQLNN 1035

Query: 1260 QA 1265
             A
Sbjct: 1036 AA 1037


>ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Oryza brachyantha]
          Length = 1057

 Score =  563 bits (1452), Expect = e-158
 Identities = 284/422 (67%), Positives = 328/422 (77%), Gaps = 2/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFAR 182
            +GTNAIVAVL+YTGYDMEDAMILNKS+VDRG+ RGHIYQTE IDL++K   D   E F +
Sbjct: 630  SGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIYQTECIDLSEKSR-DNAVEFFCK 688

Query: 183  SNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVDG 362
            SN  R+    IDSDGLP +G+ + P E  YS  N LT   +P  LKGSE A IDYV+V+G
Sbjct: 689  SNLLRDTTAVIDSDGLPCIGEKIFPNEQYYSVCNNLTGVVRPVKLKGSEPAAIDYVAVNG 748

Query: 363  TGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIIN 542
            T  KN LQK N+R RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRPDLIIN
Sbjct: 749  TNFKNRLQKANVRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIIN 808

Query: 543  PHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGPM 722
            PHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S+                  LGPM
Sbjct: 809  PHAFPSRMTIAMLLESIAAKAGSLTGKFMDATPF--SSSVEKRDENSCTSNSIVDELGPM 866

Query: 723  LTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQP 902
            L +YGFNYHG EV++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQITRQP
Sbjct: 867  LASYGFNYHGTEVLYSGVFGTEMNCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQP 926

Query: 903  XXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATII--Q 1076
                         EMERDAVLAHGA+YLLHDRLHSCSDYHIADVCS CGS+L+AT+I  +
Sbjct: 927  VGGRKFGGGIRFGEMERDAVLAHGASYLLHDRLHSCSDYHIADVCSLCGSLLTATVIKSE 986

Query: 1077 PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLR 1256
             QKK+ +++ GLP  R  K++ CQACKT+KGMETVAMPYVF+YLAAE  AMNIK++L+L 
Sbjct: 987  SQKKAKQDMLGLPTVRPAKNFACQACKTTKGMETVAMPYVFRYLAAELAAMNIKLELRLS 1046

Query: 1257 SQ 1262
            ++
Sbjct: 1047 NR 1048


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score =  563 bits (1452), Expect = e-158
 Identities = 286/422 (67%), Positives = 325/422 (77%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKH-ETDRIQEIFA 179
            TGTNAIVAVLAYTGYDMEDAMILNKSSV+RG+  G IYQTE+IDL ++   +DR   +F 
Sbjct: 752  TGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFR 811

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            +SN +++   SIDSDGLP+VGQM+ P EP  S +N +TS+      KGSE   +DYV+ D
Sbjct: 812  KSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAAD 871

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
               +K +LQKVNIR R  R P+IGDKFSSRHGQKGVCSQLWPDVDMPFS  TGMRPDLII
Sbjct: 872  -VKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLII 930

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF RS+                  LG 
Sbjct: 931  NPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF-RSSVTKDSGESDSKSGSLVDDLGL 989

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            +L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQ
Sbjct: 990  LLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQ 1049

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS CGS+L+ T IQP
Sbjct: 1050 PIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQP 1109

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            QK+  REI GLPP R PK   C AC+TSKGMETVAMPYVF+YLAAE  AMNIKM L+L  
Sbjct: 1110 QKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSD 1169

Query: 1260 QA 1265
             A
Sbjct: 1170 GA 1171


>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 719

 Score =  563 bits (1451), Expect = e-158
 Identities = 285/423 (67%), Positives = 328/423 (77%), Gaps = 1/423 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFA 179
            TGTNAIVAVLAYTGYDMEDAMILNKSSV+RG+  G IYQTE+IDL+ + + + R Q++F 
Sbjct: 298  TGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFR 357

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            RSN D ++   ID+DGLPYVGQM+ P EP  S ++ +  TT+   LKGSE  I+DYVSVD
Sbjct: 358  RSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVD 417

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
               +KN  QKVNIR RR R P+IGDKFSSRHGQKGVCSQLWPDVDMPF   TGMRPDLII
Sbjct: 418  -VKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLII 476

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI ML+ES+AAKGG L+G+FV+ATPF  S                   LG 
Sbjct: 477  NPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVDELGS 536

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
             L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDK+QVRSTGTVDQ+TRQ
Sbjct: 537  TLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQ 596

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGA+YLLHDRLH+CSD+HIADVCS CGSVL+++ +QP
Sbjct: 597  PIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSSFVQP 656

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
             K++ REI GLPP + PK   C ACKTSKGMETVAMPYVFKYLAAE  AMNIKM LQL S
Sbjct: 657  PKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLSS 716

Query: 1260 QAS 1268
             A+
Sbjct: 717  GAA 719


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  563 bits (1451), Expect = e-158
 Identities = 285/423 (67%), Positives = 328/423 (77%), Gaps = 1/423 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFA 179
            TGTNAIVAVLAYTGYDMEDAMILNKSSV+RG+  G IYQTE+IDL+ + + + R Q++F 
Sbjct: 752  TGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFR 811

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            RSN D ++   ID+DGLPYVGQM+ P EP  S ++ +  TT+   LKGSE  I+DYVSVD
Sbjct: 812  RSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVD 871

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
               +KN  QKVNIR RR R P+IGDKFSSRHGQKGVCSQLWPDVDMPF   TGMRPDLII
Sbjct: 872  -VKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLII 930

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI ML+ES+AAKGG L+G+FV+ATPF  S                   LG 
Sbjct: 931  NPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVDELGS 990

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
             L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDK+QVRSTGTVDQ+TRQ
Sbjct: 991  TLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQ 1050

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGA+YLLHDRLH+CSD+HIADVCS CGSVL+++ +QP
Sbjct: 1051 PIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSSFVQP 1110

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
             K++ REI GLPP + PK   C ACKTSKGMETVAMPYVFKYLAAE  AMNIKM LQL S
Sbjct: 1111 PKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLSS 1170

Query: 1260 QAS 1268
             A+
Sbjct: 1171 GAA 1173


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score =  562 bits (1448), Expect = e-157
 Identities = 285/422 (67%), Positives = 325/422 (77%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    TGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKH-ETDRIQEIFA 179
            +GTNAIVAVLAYTGYDMEDAMILNKSSV+RG+  G IYQTE+IDL ++   +DR   +F 
Sbjct: 728  SGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFR 787

Query: 180  RSNTDRNMMFSIDSDGLPYVGQMVHPREPLYSTHNTLTSTTKPTCLKGSEDAIIDYVSVD 359
            +SN +++   SIDSDGLP+VGQM+ P EP  S +N +TS+      KGSE   +DYV+ D
Sbjct: 788  KSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAAD 847

Query: 360  GTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLII 539
               +K +LQKVNIR R  R P+IGDKFSSRHGQKGVCSQLWPDVDMPFS  TGMRPDLII
Sbjct: 848  -VKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLII 906

Query: 540  NPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXXXXXXXXXXLGP 719
            NPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF RS+                  LG 
Sbjct: 907  NPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF-RSSVTKDSGESDSKSGSLVDDLGL 965

Query: 720  MLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQ 899
            +L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQ
Sbjct: 966  LLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQ 1025

Query: 900  PXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLSATIIQP 1079
            P             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS CGS+L+ T IQP
Sbjct: 1026 PIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQP 1085

Query: 1080 QKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTAMNIKMDLQLRS 1259
            QK+  REI GLPP R PK   C AC+TSKGMETVAMPYVF+YLAAE  AMNIKM L+L  
Sbjct: 1086 QKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSD 1145

Query: 1260 QA 1265
             A
Sbjct: 1146 GA 1147