BLASTX nr result

ID: Zingiber25_contig00005122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00005122
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus...    84   1e-14
ref|XP_002300372.1| hypothetical protein POPTR_0001s37430g [Popu...    83   3e-14
gb|ABK96376.1| unknown [Populus trichocarpa x Populus deltoides]       83   3e-14
ref|XP_004506689.1| PREDICTED: 30S ribosomal protein S10, chloro...    83   4e-14
emb|CBI39707.3| unnamed protein product [Vitis vinifera]               82   7e-14
ref|XP_002265045.1| PREDICTED: 30S ribosomal protein S10, chloro...    82   7e-14
emb|CAN74383.1| hypothetical protein VITISV_023801 [Vitis vinifera]    82   7e-14
ref|NP_187919.1| 30S ribosomal protein S10 [Arabidopsis thaliana...    82   1e-13
gb|ESW18611.1| hypothetical protein PHAVU_006G055300g [Phaseolus...    82   1e-13
ref|XP_006407260.1| hypothetical protein EUTSA_v10021566mg [Eutr...    82   1e-13
ref|XP_006298304.1| hypothetical protein CARUB_v10014368mg [Caps...    82   1e-13
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...    82   1e-13
gb|ABB97026.1| unknown [Brassica rapa]                                 82   1e-13
ref|XP_002884945.1| hypothetical protein ARALYDRAFT_478688 [Arab...    82   1e-13
gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]          82   1e-13
ref|XP_006377649.1| 30S ribosomal protein S10 [Populus trichocar...    81   2e-13
gb|EOY12071.1| Ribosomal protein S10p/S20e family protein isofor...    81   2e-13
gb|EOY12070.1| Ribosomal protein S10p/S20e family protein isofor...    81   2e-13
gb|ABK92860.1| unknown [Populus trichocarpa]                           81   2e-13
gb|AAW22623.1| 30S ribosomal protein S10-like [Brassica napus]         81   2e-13

>ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus communis]
           gi|223537962|gb|EEF39575.1| 30S ribosomal protein S10,
           putative [Ricinus communis]
          Length = 208

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = +2

Query: 269 PSFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           PS  + AD DK+APKQKIRIKLRSYWV LIEDSCKQI++AAR TNAKTM
Sbjct: 95  PSISIAADADKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTM 143


>ref|XP_002300372.1| hypothetical protein POPTR_0001s37430g [Populus trichocarpa]
           gi|566153282|ref|XP_006369998.1| 30S ribosomal protein
           S10 [Populus trichocarpa] gi|222847630|gb|EEE85177.1|
           hypothetical protein POPTR_0001s37430g [Populus
           trichocarpa] gi|550349096|gb|ERP66567.1| 30S ribosomal
           protein S10 [Populus trichocarpa]
          Length = 209

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  + AD DKMAPKQKIRIKLRS+WV LIEDSCKQI++AARTTNAKTM
Sbjct: 97  SVSIAADADKMAPKQKIRIKLRSFWVKLIEDSCKQIMDAARTTNAKTM 144


>gb|ABK96376.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 209

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  + AD DKMAPKQKIRIKLRS+WV LIEDSCKQI++AARTTNAKTM
Sbjct: 97  SVSITADADKMAPKQKIRIKLRSFWVKLIEDSCKQIMDAARTTNAKTM 144


>ref|XP_004506689.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Cicer
           arietinum]
          Length = 201

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/45 (86%), Positives = 41/45 (91%)
 Frame = +2

Query: 281 VEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           +EAD D MAPKQKIRIKLRSYW  LIEDSCKQIL+AARTTNAKTM
Sbjct: 92  IEADADMMAPKQKIRIKLRSYWADLIEDSCKQILDAARTTNAKTM 136


>emb|CBI39707.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = +2

Query: 290 DTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           D DKMAPKQKIRIKLRSYWV LIEDSCKQI+EAARTTNAKTM
Sbjct: 94  DADKMAPKQKIRIKLRSYWVPLIEDSCKQIMEAARTTNAKTM 135


>ref|XP_002265045.1| PREDICTED: 30S ribosomal protein S10, chloroplastic [Vitis
           vinifera]
          Length = 203

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = +2

Query: 290 DTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           D DKMAPKQKIRIKLRSYWV LIEDSCKQI+EAARTTNAKTM
Sbjct: 97  DADKMAPKQKIRIKLRSYWVPLIEDSCKQIMEAARTTNAKTM 138


>emb|CAN74383.1| hypothetical protein VITISV_023801 [Vitis vinifera]
          Length = 203

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = +2

Query: 290 DTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           D DKMAPKQKIRIKLRSYWV LIEDSCKQI+EAARTTNAKTM
Sbjct: 97  DADKMAPKQKIRIKLRSYWVPLIEDSCKQIMEAARTTNAKTM 138


>ref|NP_187919.1| 30S ribosomal protein S10 [Arabidopsis thaliana]
           gi|334185302|ref|NP_001189875.1| 30S ribosomal protein
           S10 [Arabidopsis thaliana]
           gi|75311242|sp|Q9LK61.1|RR10_ARATH RecName: Full=30S
           ribosomal protein S10, chloroplastic; Flags: Precursor
           gi|14326495|gb|AAK60293.1|AF385700_1 AT3g13120/MJG19_6
           [Arabidopsis thaliana]
           gi|16226587|gb|AAL16207.1|AF428438_1 AT3g13120/MJG19_6
           [Arabidopsis thaliana] gi|10172599|dbj|BAB01403.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|19548033|gb|AAL87380.1| AT3g13120/MJG19_6
           [Arabidopsis thaliana] gi|332641777|gb|AEE75298.1| 30S
           ribosomal protein S10 [Arabidopsis thaliana]
           gi|332641778|gb|AEE75299.1| 30S ribosomal protein S10
           [Arabidopsis thaliana]
          Length = 191

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  +  D DKMAPKQKIRIKLRSYWV LIEDSCKQIL+AAR TNAKTM
Sbjct: 79  SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTM 126


>gb|ESW18611.1| hypothetical protein PHAVU_006G055300g [Phaseolus vulgaris]
          Length = 205

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           +  + AD D MAPKQKIRIKLRSYWV LIEDSCKQIL+AARTTNAKTM
Sbjct: 93  AISIGADADAMAPKQKIRIKLRSYWVPLIEDSCKQILDAARTTNAKTM 140


>ref|XP_006407260.1| hypothetical protein EUTSA_v10021566mg [Eutrema salsugineum]
           gi|557108406|gb|ESQ48713.1| hypothetical protein
           EUTSA_v10021566mg [Eutrema salsugineum]
          Length = 194

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  +  D DKMAPKQKIRIKLRSYWV LIEDSCKQIL+AAR TNAKTM
Sbjct: 82  SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTM 129


>ref|XP_006298304.1| hypothetical protein CARUB_v10014368mg [Capsella rubella]
           gi|482567013|gb|EOA31202.1| hypothetical protein
           CARUB_v10014368mg [Capsella rubella]
          Length = 274

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  +  D DKMAPKQKIRIKLRSYWV LIEDSCKQIL+AAR TNAKTM
Sbjct: 162 SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTM 209


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +2

Query: 281 VEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           + AD+D+MAPKQKIRIKLRSYWV LIEDSCKQI++AARTTNAKTM
Sbjct: 88  IGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTM 132


>gb|ABB97026.1| unknown [Brassica rapa]
          Length = 190

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  +  D DKMAPKQKIRIKLRSYWV LIEDSCKQIL+AAR TNAKTM
Sbjct: 78  SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTM 125


>ref|XP_002884945.1| hypothetical protein ARALYDRAFT_478688 [Arabidopsis lyrata subsp.
           lyrata] gi|297330785|gb|EFH61204.1| hypothetical protein
           ARALYDRAFT_478688 [Arabidopsis lyrata subsp. lyrata]
          Length = 191

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  +  D DKMAPKQKIRIKLRSYWV LIEDSCKQIL+AAR TNAKTM
Sbjct: 79  SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTM 126


>gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]
          Length = 193

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  +  D DKMAPKQKIRIKLRSYWV LIEDSCKQIL+AAR TNAKTM
Sbjct: 81  SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTM 128


>ref|XP_006377649.1| 30S ribosomal protein S10 [Populus trichocarpa]
           gi|566194598|ref|XP_002317356.2| hypothetical protein
           POPTR_0011s09530g [Populus trichocarpa]
           gi|550328007|gb|ERP55446.1| 30S ribosomal protein S10
           [Populus trichocarpa] gi|550328008|gb|EEE97968.2|
           hypothetical protein POPTR_0011s09530g [Populus
           trichocarpa]
          Length = 206

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  + AD D MAPKQKIRIKLRS+WV LIEDSCKQI++AARTTNAKTM
Sbjct: 94  SVSIAADADMMAPKQKIRIKLRSFWVKLIEDSCKQIMDAARTTNAKTM 141


>gb|EOY12071.1| Ribosomal protein S10p/S20e family protein isoform 2, partial
           [Theobroma cacao]
          Length = 177

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  V A+ DK APKQKIRIKLRSYWV LIEDSCKQI++AARTTNAKTM
Sbjct: 65  SSSVSAEADKTAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTM 112


>gb|EOY12070.1| Ribosomal protein S10p/S20e family protein isoform 1 [Theobroma
           cacao]
          Length = 253

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  V A+ DK APKQKIRIKLRSYWV LIEDSCKQI++AARTTNAKTM
Sbjct: 141 SSSVSAEADKTAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTM 188


>gb|ABK92860.1| unknown [Populus trichocarpa]
          Length = 177

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = +2

Query: 272 SFDVEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           S  + AD D MAPKQKIRIKLRS+WV LIEDSCKQI++AARTTNAKTM
Sbjct: 94  SVSIAADADMMAPKQKIRIKLRSFWVKLIEDSCKQIMDAARTTNAKTM 141


>gb|AAW22623.1| 30S ribosomal protein S10-like [Brassica napus]
          Length = 196

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/45 (84%), Positives = 40/45 (88%)
 Frame = +2

Query: 281 VEADTDKMAPKQKIRIKLRSYWVSLIEDSCKQILEAARTTNAKTM 415
           +  D DKMAPKQKIRIKLRSYWV LIEDSCKQIL+AAR TNAKTM
Sbjct: 87  ISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTM 131


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