BLASTX nr result
ID: Zingiber25_contig00004850
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00004850
(1380 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 520 e-145
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 519 e-144
ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [S... 513 e-143
ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea ma... 511 e-142
ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I an... 507 e-141
ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I an... 505 e-140
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 502 e-139
ref|XP_006654023.1| PREDICTED: DNA-directed RNA polymerases I an... 500 e-139
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 500 e-139
ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I an... 498 e-138
ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group] g... 498 e-138
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 497 e-138
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 491 e-136
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 489 e-136
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 472 e-130
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 471 e-130
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 470 e-130
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ... 468 e-129
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 468 e-129
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 467 e-129
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 520 bits (1339), Expect = e-145
Identities = 255/361 (70%), Positives = 303/361 (83%), Gaps = 5/361 (1%)
Frame = -2
Query: 1250 ALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNF 1071
ALDMPDVP GQLP H+ QRTRV CN DAP HT+ V YSGAYS MGVDNS+ +++F NF
Sbjct: 6 ALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNF 65
Query: 1070 KVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHR 891
+VE++RLSED++EFDMIGID S+ANAFRRILIAE+PTMAIEKVL+ NNTS++ DEVL+HR
Sbjct: 66 RVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHR 125
Query: 890 LGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSELE 711
LGLIP++ADPRLF+ LSEND PNE+NTIV+ L V C++ PR TVK+++LKWLP+GSE
Sbjct: 126 LGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEFP 185
Query: 710 MA----TLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAV 543
+A T ++K K+YTSFSCSQDSLPE S K +G KH DIIIAKLGPGQ IELEAHAV
Sbjct: 186 LATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHAV 245
Query: 542 KGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAI 363
KG+GK HAKWSPVA+AWYRMLPEVVLL E++ + AE+LV KCPVNVFDIED+ G KKA
Sbjct: 246 KGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKAT 305
Query: 362 VANPRACTLCRECIRGVN-EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCD 186
VA PRACTLCRECIRG + ++ V + RVK+HFIFTIESTGAL PE LF EAVK+LE+KC+
Sbjct: 306 VARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKCE 365
Query: 185 R 183
R
Sbjct: 366 R 366
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 519 bits (1336), Expect = e-144
Identities = 258/369 (69%), Positives = 302/369 (81%), Gaps = 5/369 (1%)
Frame = -2
Query: 1274 GEMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMG 1095
GE KK S D+PDVP GQLP HL QRTRV CN DAPIHT++V YSGAY+ MGVDNS+
Sbjct: 9 GEEKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLR 68
Query: 1094 LEKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLI 915
L+ F NF+VE+VRL+E+++EFDMIGIDA++ANAFRRILIAE+PTMAIEKVL+ NNTS++
Sbjct: 69 LDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVV 128
Query: 914 ADEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKW 735
DEVL+HRLGLIP+ DPRLFEY+SEND PNE+NTIV+KL V CK+ SPR TVK+ +LKW
Sbjct: 129 QDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKW 188
Query: 734 LPNGSEL----EMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQA 567
LPNGSEL D ++K ++YTSFSCSQD+LPE + P+ K+ DIII+KLGPGQ
Sbjct: 189 LPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGPGQE 248
Query: 566 IELEAHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDL 387
IELEAHAVKG+GK HAKWSPVA+AWYRMLPEVVLL EV+ AE L +KCPVNVFDIEDL
Sbjct: 249 IELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDIEDL 308
Query: 386 GHGDKKAIVANPRACTLCRECIRGVN-EELVELGRVKHHFIFTIESTGALSPEELFIEAV 210
G G K+A VA PRACTLCRECIR E+ V + RVK HFIFTIESTGAL PE LF EAV
Sbjct: 309 GKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFTEAV 368
Query: 209 KILEEKCDR 183
KILE+KC+R
Sbjct: 369 KILEDKCER 377
>ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [Sorghum bicolor]
gi|241933300|gb|EES06445.1| hypothetical protein
SORBIDRAFT_04g006420 [Sorghum bicolor]
Length = 370
Score = 513 bits (1321), Expect = e-143
Identities = 259/365 (70%), Positives = 304/365 (83%), Gaps = 1/365 (0%)
Frame = -2
Query: 1274 GEMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMG 1095
G SK+V + P+ +LP++L QRTRV CNADAPIHT YSG ++ MGVDNS+
Sbjct: 5 GTKSKEVD--NAPNQQENKLPDYLEVQRTRVVCNADAPIHTQGYQYSGTFAAMGVDNSVS 62
Query: 1094 LEKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLI 915
+EKF KNFK+EI RL+ED++EFDMIGIDAS+ANAFRRILIAE+PTMAIEK+ MV+NTS+I
Sbjct: 63 VEKFCKNFKIEINRLTEDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVI 122
Query: 914 ADEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKW 735
ADEVLSHRLGLIPL ADPRLF+Y+SENDVPNERNT+VYKL VSC K S R TVK+S+L+W
Sbjct: 123 ADEVLSHRLGLIPLRADPRLFDYISENDVPNERNTVVYKLHVSCPKGSQRITVKSSELEW 182
Query: 734 LPNGSELEMATLDKSA-KVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIEL 558
LP GS+L MA +S K K++TSFS SQ EI ++PLGVK DI IA+LGPGQAIEL
Sbjct: 183 LPEGSQLSMAAPAQSGDKQKTFTSFSQSQ---KEILEEPLGVKFKDITIARLGPGQAIEL 239
Query: 557 EAHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHG 378
EAHAVKG+GKVHAKWSPVA+AWYRMLPEVV+L +++G DAE+LV KCPVNVFDIEDLG+G
Sbjct: 240 EAHAVKGVGKVHAKWSPVATAWYRMLPEVVILKDIEGDDAEELVKKCPVNVFDIEDLGNG 299
Query: 377 DKKAIVANPRACTLCRECIRGVNEELVELGRVKHHFIFTIESTGALSPEELFIEAVKILE 198
K+A+VA PRACTLCREC+ G N VEL RV+ HFIFTIESTGAL PE LF EAVKILE
Sbjct: 300 GKRAVVAKPRACTLCRECVMGPNGNQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILE 359
Query: 197 EKCDR 183
EKC+R
Sbjct: 360 EKCER 364
>ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea mays]
gi|194690246|gb|ACF79207.1| unknown [Zea mays]
gi|413926820|gb|AFW66752.1| hypothetical protein
ZEAMMB73_992882 [Zea mays]
Length = 372
Score = 511 bits (1317), Expect = e-142
Identities = 258/365 (70%), Positives = 302/365 (82%), Gaps = 1/365 (0%)
Frame = -2
Query: 1274 GEMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMG 1095
G SKK D+P+ +LP++L QRTRV CNADAPIHT YSGA++ MG+DNS+
Sbjct: 5 GTKSKKEKVDDVPNEQENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGIDNSVS 64
Query: 1094 LEKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLI 915
++KF KNFK+EI RL+ED +EFDMIGIDAS+ANAFRRILI+E+PTMAIEKV M +N S+I
Sbjct: 65 VDKFCKNFKIEINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNSVI 124
Query: 914 ADEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKW 735
ADEVLSHRLGLIPLDADPRLFEY+SENDVPNERNTIVYKL VSC K+S R TVK+S+L+W
Sbjct: 125 ADEVLSHRLGLIPLDADPRLFEYISENDVPNERNTIVYKLHVSCPKNSQRITVKSSELEW 184
Query: 734 LPNGSELEMATLDKSA-KVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIEL 558
LP GS+L M+ +S K K++TSFS SQ EI +KPLGVK+ DI IA+LGPGQAIEL
Sbjct: 185 LPEGSQLSMSAPAQSGDKQKTFTSFSQSQ---KEILEKPLGVKYKDITIARLGPGQAIEL 241
Query: 557 EAHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHG 378
EAHAVKG G VHAKWSPVA+AWYRMLPEVV+L EV+G AE+LVNKC VNVFDIEDL +G
Sbjct: 242 EAHAVKGTGNVHAKWSPVATAWYRMLPEVVILKEVEGPQAEELVNKCRVNVFDIEDLANG 301
Query: 377 DKKAIVANPRACTLCRECIRGVNEELVELGRVKHHFIFTIESTGALSPEELFIEAVKILE 198
K+A+VA PRACTLCREC+ G NE+ VEL RV+ HFIFTIESTG++ PE LF EAVKILE
Sbjct: 302 GKRAVVARPRACTLCRECVMGPNEKQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKILE 361
Query: 197 EKCDR 183
EKC R
Sbjct: 362 EKCAR 366
>ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like
[Brachypodium distachyon]
Length = 360
Score = 507 bits (1305), Expect = e-141
Identities = 256/358 (71%), Positives = 300/358 (83%), Gaps = 3/358 (0%)
Frame = -2
Query: 1247 LDMPDVPMGQ---LPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSK 1077
+DM DVP Q LP+HL RQRTRVTC ADAP HT YSGA++ MGVDNS+ +EKF
Sbjct: 1 MDMDDVPTQQRNKLPDHLERQRTRVTCKADAPTHTQGFQYSGAFAAMGVDNSVSVEKFCN 60
Query: 1076 NFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLS 897
+FK++I RL+ED++EFDMIG+DAS+ANAFRRILIAE+PTMAIEKV MV+NTS+IADEVLS
Sbjct: 61 SFKIKINRLTEDDMEFDMIGVDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVLS 120
Query: 896 HRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSE 717
HRLGLIPLDADPRLF+++S+ DVPNERNTIVYKL VSC+K S R TVK+ QL+WLP GS+
Sbjct: 121 HRLGLIPLDADPRLFDHISD-DVPNERNTIVYKLHVSCEKGSQRLTVKSGQLEWLPEGSQ 179
Query: 716 LEMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKG 537
L MA+ + K K+YTSF SQ + IS + +GVK+ DI IA+LGPGQAIELEAHAVKG
Sbjct: 180 LLMASAAQGEKQKTYTSFGQSQKN---ISGRSIGVKYKDITIARLGPGQAIELEAHAVKG 236
Query: 536 IGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVA 357
+GKVHAKWSPVA+AWYRMLPEVVLL E+K +AE+LV KCPVNVFDIEDLG+G K+A+VA
Sbjct: 237 VGKVHAKWSPVATAWYRMLPEVVLLKEIKDGEAEELVKKCPVNVFDIEDLGNGAKRAVVA 296
Query: 356 NPRACTLCRECIRGVNEELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCDR 183
PRACTLCREC+ G E VEL RV+ HFIFTIESTGAL PE LF EAVKILEEKC+R
Sbjct: 297 RPRACTLCRECVMGPTGEQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCER 354
>ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like
[Setaria italica]
Length = 372
Score = 505 bits (1300), Expect = e-140
Identities = 254/366 (69%), Positives = 305/366 (83%), Gaps = 2/366 (0%)
Frame = -2
Query: 1274 GEMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMG 1095
G SKK D+ D +LP+HL QRTRV CNADAPIHT YSGA+++MGVDNS+
Sbjct: 5 GTKSKK-QVDDVLDQQENKLPDHLELQRTRVVCNADAPIHTQGYQYSGAFTVMGVDNSVS 63
Query: 1094 LEKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLI 915
+EKF KNFK++I RL+ED++EFDMIG+DAS+ANAFRRILI+E+PTMAIEK+ M +NTS+I
Sbjct: 64 VEKFCKNFKIDIKRLTEDDMEFDMIGVDASIANAFRRILISEVPTMAIEKIFMADNTSVI 123
Query: 914 ADEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSC-KKDSPRNTVKTSQLK 738
ADEVLSHRLGLIPLDADPRLF+Y+SENDVPNERNTIVYKL VSC KK SPR TVK+ +L+
Sbjct: 124 ADEVLSHRLGLIPLDADPRLFDYISENDVPNERNTIVYKLHVSCPKKGSPRITVKSGELE 183
Query: 737 WLPNGSELEMATLDKSA-KVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIE 561
WLP GS+L MA+ +S K K++TSFS SQ +I +KPLGVK DI IA+LGPGQAIE
Sbjct: 184 WLPEGSQLSMASPGQSGDKPKTFTSFSQSQ---KDILQKPLGVKFKDITIARLGPGQAIE 240
Query: 560 LEAHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGH 381
LEAHAVKG+GKVHAKWSPVA+AWYRMLPEV +L +++ +AE+LV KCPVNVFDIEDLG
Sbjct: 241 LEAHAVKGVGKVHAKWSPVATAWYRMLPEVEILKQIEDVNAEELVKKCPVNVFDIEDLGD 300
Query: 380 GDKKAIVANPRACTLCRECIRGVNEELVELGRVKHHFIFTIESTGALSPEELFIEAVKIL 201
G K+A+VA PRACTLCREC+ G + + ++L RV+ HFIFTIESTGAL PE LF EAVKIL
Sbjct: 301 GRKRAVVAKPRACTLCRECVMGPSGDKIQLRRVRDHFIFTIESTGALPPEVLFTEAVKIL 360
Query: 200 EEKCDR 183
EEKC++
Sbjct: 361 EEKCEK 366
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 502 bits (1293), Expect = e-139
Identities = 254/368 (69%), Positives = 293/368 (79%), Gaps = 5/368 (1%)
Frame = -2
Query: 1271 EMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGL 1092
E KVS D+PD+P G+LP H+ QRTRV C + AP +T+ V+YSGAY+ MGVDNS+
Sbjct: 20 ETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRF 79
Query: 1091 EKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIA 912
E+F NFKVEIVRL EDE+EFDMIGID SLANAFRRILIAE+PTMAIEKVL+ NNTS+I
Sbjct: 80 EQFRNNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQ 139
Query: 911 DEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWL 732
DEVL+HRLGLIP++ DPRLFEY+SENDVPNE+NTIV+KL C K S R V +S+LKWL
Sbjct: 140 DEVLAHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCTKGSDRLRVLSSELKWL 199
Query: 731 PNGSEL----EMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAI 564
PNGSEL E + SAK K+YTSFSCSQD+LPE S P+ K DII+AKLGPGQ I
Sbjct: 200 PNGSELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSNDPIAPKDADIIVAKLGPGQEI 259
Query: 563 ELEAHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLG 384
ELEAHAVKG+GK HAKWSPVA+AWYRMLPEVVLL +++ +AE LV KCPV VFDIED+G
Sbjct: 260 ELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIEDDEAEALVKKCPVKVFDIEDIG 319
Query: 383 HGDKKAIVANPRACTLCRECIRGVN-EELVELGRVKHHFIFTIESTGALSPEELFIEAVK 207
G K+A VA PR CTLCRECIR ++ V L RV HFIFTIESTGAL PE LF EAVK
Sbjct: 320 KGKKRATVARPRICTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVK 379
Query: 206 ILEEKCDR 183
ILEEKC+R
Sbjct: 380 ILEEKCER 387
>ref|XP_006654023.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like
[Oryza brachyantha]
Length = 374
Score = 500 bits (1288), Expect = e-139
Identities = 250/347 (72%), Positives = 292/347 (84%), Gaps = 1/347 (0%)
Frame = -2
Query: 1220 QLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNFKVEIVRLSED 1041
+LPEHL QRTRV C D P++T+ Y GA+S MG+DNS+ ++KF K+FKVEI RL+ED
Sbjct: 25 KLPEHLELQRTRVVCKFDGPVNTEGFQYGGAFSAMGIDNSVSVDKFCKDFKVEIKRLTED 84
Query: 1040 EIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHRLGLIPLDADP 861
++EFDMIGIDAS+ANAFRRILIAE+PTMAIEKVL+ +N+S+IADEVL+HRLGLIPLDADP
Sbjct: 85 DVEFDMIGIDASVANAFRRILIAEVPTMAIEKVLIADNSSVIADEVLAHRLGLIPLDADP 144
Query: 860 RLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSELEMATLDKSA-K 684
RLFEY+SEND PNERNTIVYKL VSCKK SPR TVK+ L+WLP GS+L +A+ +S K
Sbjct: 145 RLFEYISENDAPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQLPLASPAQSRDK 204
Query: 683 VKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKGIGKVHAKWSPV 504
K+YTSFS SQ +I +KPLGVK DI IA+LGPGQAIELE HAVKGIGKVHAKWSPV
Sbjct: 205 KKTYTSFSQSQ---KDILEKPLGVKLKDITIARLGPGQAIELEVHAVKGIGKVHAKWSPV 261
Query: 503 ASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVANPRACTLCREC 324
A+AWYRMLPEVVL E KG DAE+LV KCPVNVFDIEDLG+G+K+A VA PRACTLCR+C
Sbjct: 262 ATAWYRMLPEVVLSEEFKGDDAEELVKKCPVNVFDIEDLGNGEKRAFVAKPRACTLCRQC 321
Query: 323 IRGVNEELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCDR 183
+ G + E V L RV+ HFIFTIESTGAL PE LF EAV+ILEEKC+R
Sbjct: 322 VTGPSGEHVHLRRVRDHFIFTIESTGALPPETLFTEAVRILEEKCER 368
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 500 bits (1287), Expect = e-139
Identities = 253/368 (68%), Positives = 294/368 (79%), Gaps = 5/368 (1%)
Frame = -2
Query: 1271 EMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGL 1092
E KVS D+PD+P G+LP H+ QRTRV C + AP +T+ V+YSGAY+ MGVDNS+
Sbjct: 20 ETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRF 79
Query: 1091 EKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIA 912
E+F NFKVEIVRL EDE+EFDMIGID SLANAFRRILIAE+PTMAIEKVL+ NNTS+I
Sbjct: 80 EQFRDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQ 139
Query: 911 DEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWL 732
DEVL+HRLGLIP+ DPRLFEY+SENDVPNE+NTIV+KL V C K S R V +S+LKWL
Sbjct: 140 DEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCTKGSDRLRVLSSELKWL 199
Query: 731 PNGSEL----EMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAI 564
PNGSEL E + SAK K+YTSFSCSQD+ PE S +P+ K DII+AKLGPGQ I
Sbjct: 200 PNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEPIAPKDADIIVAKLGPGQEI 259
Query: 563 ELEAHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLG 384
ELEAHAVKG+GK HAKWSPVA+AWYRMLPEV+LL +++ +AE LV KCP+ VFDIED+G
Sbjct: 260 ELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDEAEALVKKCPLKVFDIEDIG 319
Query: 383 HGDKKAIVANPRACTLCRECIRGVN-EELVELGRVKHHFIFTIESTGALSPEELFIEAVK 207
G K+A VA PRACTLCRECIR ++ V L RV HFIFTIESTGAL PE LF EAVK
Sbjct: 320 KGKKRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVK 379
Query: 206 ILEEKCDR 183
ILEEKC+R
Sbjct: 380 ILEEKCER 387
>ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Setaria italica]
Length = 372
Score = 498 bits (1282), Expect = e-138
Identities = 248/356 (69%), Positives = 296/356 (83%), Gaps = 2/356 (0%)
Frame = -2
Query: 1244 DMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNFKV 1065
D+PD +LP+HL QRTRV CNADAPIHT YSG Y+ GVDNS+ +EKF KNFK+
Sbjct: 14 DVPDQQENKLPDHLELQRTRVVCNADAPIHTQGFQYSGTYAATGVDNSVSVEKFCKNFKI 73
Query: 1064 EIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHRLG 885
+I L+ED++EFDMIG+DAS+ANAFRRILI+E+PTMAIEK+ M +NTS+IADEVLSHRLG
Sbjct: 74 DIKHLTEDDMEFDMIGVDASIANAFRRILISEVPTMAIEKIFMADNTSVIADEVLSHRLG 133
Query: 884 LIPLDADPRLFEYLSENDVPNERNTIVYKLEVSC-KKDSPRNTVKTSQLKWLPNGSELEM 708
LIPLDADPRLF+Y+SENDVPNERNTIVYKL VSC KK S R TVK+ +L+WLP GS+L M
Sbjct: 134 LIPLDADPRLFDYISENDVPNERNTIVYKLHVSCPKKGSQRITVKSGELEWLPEGSQLSM 193
Query: 707 ATLDKSA-KVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKGIG 531
A+ +S K K++TSFS SQ +I +KPLGVK DI IA+LG GQAIELEAHAVKG+G
Sbjct: 194 ASPGQSGDKQKTFTSFSQSQ---KDILQKPLGVKFKDITIARLGAGQAIELEAHAVKGVG 250
Query: 530 KVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVANP 351
KVHAKWSPVA+AWYRMLPEV +L +++G DAE+LV KCPVNVFDIEDLG G K+AIVA P
Sbjct: 251 KVHAKWSPVATAWYRMLPEVEILKQIEGVDAEELVKKCPVNVFDIEDLGDGRKRAIVAKP 310
Query: 350 RACTLCRECIRGVNEELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCDR 183
RACTLCR+C+ G + + ++L RV+ HFIFTIESTGAL PE LF EAVKILE KC++
Sbjct: 311 RACTLCRQCVMGPSGDKIQLRRVRDHFIFTIESTGALPPEVLFTEAVKILEGKCEK 366
>ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group]
gi|108707636|gb|ABF95431.1| RNA polymerase Rpb3/Rpb11
dimerisation domain containing protein, expressed [Oryza
sativa Japonica Group] gi|113548294|dbj|BAF11737.1|
Os03g0295400 [Oryza sativa Japonica Group]
gi|222624742|gb|EEE58874.1| hypothetical protein
OsJ_10475 [Oryza sativa Japonica Group]
Length = 379
Score = 498 bits (1282), Expect = e-138
Identities = 255/372 (68%), Positives = 299/372 (80%), Gaps = 8/372 (2%)
Frame = -2
Query: 1274 GEMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMG 1095
G S+K + + +LPEHL QRTRV C DAP++T+ Y+GA++ MG+DNS+
Sbjct: 5 GTKSRKGTDDEPKQEEKNKLPEHLEVQRTRVVCKGDAPVNTEGFQYAGAFAAMGIDNSVS 64
Query: 1094 LEKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLI 915
+KF KNFKV + RL+ED++EFDMIGIDAS+ANAFRRILIAE+PTMAIEKVLM +NTS+I
Sbjct: 65 ADKFCKNFKVVVNRLTEDDMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVI 124
Query: 914 ADEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKW 735
ADEVLSHRLGLIPLDADPRLFEY+SENDVP ERNTIVYKL VSCKK SPR TVK+ L+W
Sbjct: 125 ADEVLSHRLGLIPLDADPRLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEW 184
Query: 734 LPNGSELEMATLDKSA-KVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIEL 558
LP GS+L +A+ +S K K+YTSFS SQ +I +KPLGVK DI IA+LGPGQAIEL
Sbjct: 185 LPEGSQLPLASPAQSGDKQKTYTSFSQSQ---KDILEKPLGVKFKDITIARLGPGQAIEL 241
Query: 557 EAHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHG 378
E HAVKGIGKVHAKWSPVA+AWYRMLPEVVL E+K DAE LV KCPVNVFDIEDLG+G
Sbjct: 242 EVHAVKGIGKVHAKWSPVATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNG 301
Query: 377 DKKAIVANPRACTLCRECIRGVNEEL-------VELGRVKHHFIFTIESTGALSPEELFI 219
+K+A+VA PRACTLCR+C+ G E+ VEL RV+ HFIFTIESTGAL PE LF
Sbjct: 302 EKRAVVARPRACTLCRQCVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEMLFT 361
Query: 218 EAVKILEEKCDR 183
EAV+ILEEKC+R
Sbjct: 362 EAVRILEEKCER 373
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 497 bits (1279), Expect = e-138
Identities = 244/364 (67%), Positives = 295/364 (81%), Gaps = 1/364 (0%)
Frame = -2
Query: 1271 EMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGL 1092
E +KK S D+PDVPMGQLP HL QRTRV C +DAPIHTD + YSGAY+ +GVDNS+ L
Sbjct: 9 EKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQL 68
Query: 1091 EKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIA 912
+ F NFKVE+++L++D++EFDMIGIDA++ANAFRRILI+E+PTMAIEKVL+ NNTSLI
Sbjct: 69 DCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQ 128
Query: 911 DEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWL 732
DEVL+HRLGLIP++ADPRLFEYLS ND PNE+NTIV+KL SCK+ PR TV + +LKWL
Sbjct: 129 DEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSEELKWL 188
Query: 731 PNGSELEMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEA 552
P GS+L + +K +YTSF+ QD +P KP+ D II+AKLGPGQ IELEA
Sbjct: 189 PGGSQLLKESEKADSKPSTYTSFTDKQDFIP----KPVSPSEDKIIVAKLGPGQEIELEA 244
Query: 551 HAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDK 372
HAVKG+GK HAKWSPVA+AWYRMLPEVVLL +++ + AE+L KCPVNVFDIED+G+G K
Sbjct: 245 HAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIEDIGNGKK 304
Query: 371 KAIVANPRACTLCRECIRGVN-EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEE 195
+A VA PRACTLCRECIRG ++ V L RVK HFIFTIESTGAL PE LF EAVK+LE+
Sbjct: 305 RATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAVKVLED 364
Query: 194 KCDR 183
KC+R
Sbjct: 365 KCER 368
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 491 bits (1263), Expect = e-136
Identities = 248/362 (68%), Positives = 295/362 (81%), Gaps = 5/362 (1%)
Frame = -2
Query: 1253 SALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKN 1074
S D+PDVP +LP H+ QRTRV CN DAPIHT+ V YSGAY+ MGVDNS+ L+ F N
Sbjct: 17 SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 75
Query: 1073 FKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSH 894
F+VE++RL++D++EFD+IGIDA++ANAFRRILIAE+PTMAIEKVL+ NNTS+I DEVL+H
Sbjct: 76 FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 135
Query: 893 RLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSEL 714
RLGLIP+ DPRLFEY+SEND NE+NTIV+KL V C++ PR TVKT++LKWLPNGSEL
Sbjct: 136 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSEL 195
Query: 713 EMATLDKS---AKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAV 543
+ T S +K ++YTSFS SQDSLPE S P+ DI IA+LGPGQ IELEAHAV
Sbjct: 196 PLETKPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIRPML-DITIARLGPGQEIELEAHAV 254
Query: 542 KGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAI 363
KGIGK HAKWSPVA+AWYRMLPE+VLL +V+ +DAEKLV CPVNVFDIED+G G K+A
Sbjct: 255 KGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRAT 314
Query: 362 VANPRACTLCRECIRGVN--EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKC 189
VA PRACTLCREC+R E+ V + RVK HFIFTIESTGALSPE LF EAVKILE+KC
Sbjct: 315 VAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDKC 374
Query: 188 DR 183
+R
Sbjct: 375 ER 376
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 489 bits (1260), Expect = e-136
Identities = 247/366 (67%), Positives = 297/366 (81%), Gaps = 5/366 (1%)
Frame = -2
Query: 1265 SKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEK 1086
++ S D+PDVP +LP H+ QRTRV CN DAPIHT+ V YSGAY+ MGVDNS+ L+
Sbjct: 52 AESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDH 110
Query: 1085 FSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADE 906
F NF+VE++RL++D++EFD+IGIDA++ANAFRRILIAE+PTMAIEKVL+ NNTS+I DE
Sbjct: 111 FCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDE 170
Query: 905 VLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPN 726
VL+HRLGLIP+ DPRLFEY+SEND NE+NTIV+KL V C++ PR TVKT++LKWLPN
Sbjct: 171 VLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPN 230
Query: 725 GSELEMAT---LDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELE 555
GSEL + T + S+K ++YTSFS SQD LPE S P+ DI IA+LGPGQ IELE
Sbjct: 231 GSELPLETKPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPML-DITIARLGPGQEIELE 289
Query: 554 AHAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGD 375
AHAVKGIGK HAKWSPVA+AWYRMLPE+VLL +V+ +DAEKLV CPVNVFDIED+G G
Sbjct: 290 AHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGK 349
Query: 374 KKAIVANPRACTLCRECIRGVN--EELVELGRVKHHFIFTIESTGALSPEELFIEAVKIL 201
K+A VA PRACTLCREC+R E+ V + RVK HFIFTIESTGALSPE LF EAVKIL
Sbjct: 350 KRATVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKIL 409
Query: 200 EEKCDR 183
E+KC+R
Sbjct: 410 EDKCER 415
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 472 bits (1215), Expect = e-130
Identities = 231/358 (64%), Positives = 285/358 (79%), Gaps = 5/358 (1%)
Frame = -2
Query: 1244 DMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNFKV 1065
D+PDVP G+LP HL QRTRV C ++AP +T+ + YSGAY+LMGVDNS+ + F +NF+V
Sbjct: 3 DLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENFRV 62
Query: 1064 EIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHRLG 885
EIV + E +IEFD+IGIDA++ANAFRRILIAE+PTMAIEKVL+ NNTS+I DEVLSHRLG
Sbjct: 63 EIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHRLG 122
Query: 884 LIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSELEMA 705
LIPL DPR F ++SE+D PNE+NT+V+KL VSC++ R TVKT +LKWLPNGSEL +
Sbjct: 123 LIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKTVKTDELKWLPNGSELRLE 182
Query: 704 T----LDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKG 537
T ++ ++K+++YTSF+CSQDS+PE S L D+I IA+LGPGQ IELEAHAVKG
Sbjct: 183 TERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSDEITIARLGPGQEIELEAHAVKG 242
Query: 536 IGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVA 357
+GK HAKWSPVA+AWYR+LPE+ LL E+K + A++LV KCP VFDIED G +A VA
Sbjct: 243 MGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVKKCPQKVFDIEDAGGDGIRATVA 302
Query: 356 NPRACTLCRECIRGVN-EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCD 186
PR C+LCRECIR E+LV + RVK HFIF IESTGAL PE LF EAVKILEEKC+
Sbjct: 303 RPRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTGALPPEVLFTEAVKILEEKCE 360
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 471 bits (1212), Expect = e-130
Identities = 239/360 (66%), Positives = 287/360 (79%), Gaps = 5/360 (1%)
Frame = -2
Query: 1247 LDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNFK 1068
L + +VP +LP HL +TRV CN DAP+HTD V YSGAY+++GVDNS+ L+ F +NFK
Sbjct: 24 LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCENFK 82
Query: 1067 VEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHRL 888
VE+ RL++ +IEFDMIGID ++ANAFRRILIAE+PTMAIE+V + NNTS++ DEVLSHRL
Sbjct: 83 VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 142
Query: 887 GLIPLDADPRLFEYLSE-NDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSELE 711
GLIP+ ADPRLFEY D NE+NTIV+KL V C+ PR TVK+ +LKWLPNGSEL
Sbjct: 143 GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELP 202
Query: 710 MATLDKSA--KVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKG 537
+ +A K K++TSF+CSQDSLPE S +G+ + DII+AKLGPGQ IELEAHAVKG
Sbjct: 203 CEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKG 262
Query: 536 IGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVA 357
IGK HAKWSPVA+AWYRMLPEVVLL V+ + AE+L NKCPVNVFDIED+G G ++A VA
Sbjct: 263 IGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVA 322
Query: 356 NPRACTLCRECIRGVN--EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCDR 183
PR CTLCRECIRG E+ V L RVK+HFIFTIESTGAL PE LF EAVKILE+KC+R
Sbjct: 323 RPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 382
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 470 bits (1210), Expect = e-130
Identities = 238/360 (66%), Positives = 286/360 (79%), Gaps = 5/360 (1%)
Frame = -2
Query: 1247 LDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNFK 1068
L + +VP +LP HL +TRV CN DAP+HTD V YSGAY++MGVDNS+ L+ F +NFK
Sbjct: 29 LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENFK 87
Query: 1067 VEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHRL 888
VE+ RL++ +IEFDMIGID ++ANAFRRILIAE+PTMAIE+V + NNTS++ DEVLSHRL
Sbjct: 88 VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 147
Query: 887 GLIPLDADPRLFEYLSE-NDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSELE 711
GLIP+ ADPRLFEY D NE+NTIV+KL V C+ PR TVK+ +LKWLPNGSEL
Sbjct: 148 GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELP 207
Query: 710 MATLDKSA--KVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKG 537
+ +A K K++TSF+CSQDSLPE S +G+ + DII+AKLGPGQ IELEAHAVKG
Sbjct: 208 CEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKG 267
Query: 536 IGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVA 357
GK HAKWSPVA+ WYRMLPEVVLL +V+ + AE+L NKCPVNVFDIED+G G ++A VA
Sbjct: 268 TGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVA 327
Query: 356 NPRACTLCRECIRGVN--EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCDR 183
PR CTLCRECIRG E+ V L RVK+HFIFTIESTGAL PE LF EAVKILE+KC+R
Sbjct: 328 RPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 387
>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
subsp. lyrata]
Length = 385
Score = 468 bits (1205), Expect = e-129
Identities = 237/365 (64%), Positives = 284/365 (77%), Gaps = 2/365 (0%)
Frame = -2
Query: 1271 EMSKKVSALDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGL 1092
+ +K + D+PDVP G LP HL QRTR C DAPIH +V YSGAY+ MGVDNS+ L
Sbjct: 16 QFAKNFNIFDLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRL 74
Query: 1091 EKFSKNFKVEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIA 912
E FS++FKV+++ L+E + FDMIG+ A +ANAFRRIL+AE+P+MAIEKV + NNTS+I
Sbjct: 75 ENFSEDFKVDVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQ 134
Query: 911 DEVLSHRLGLIPLDADPRLFEYLSENDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWL 732
DEVL+HRLGLIP+ ADPRLFEYLSEND PNE+NTIV+KL V C K PR V TS+LKWL
Sbjct: 135 DEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWL 194
Query: 731 PNGSELEMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEA 552
PNGSEL + + K K+YTSFS SQDS P +K P+ DI+IAKLGPGQ IELEA
Sbjct: 195 PNGSELVKESGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEA 254
Query: 551 HAVKGIGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDK 372
HAVKGIGK HAKWSPVA+AWYRMLPEV+LL E +G+ AE+LV CP VFDIED+G G K
Sbjct: 255 HAVKGIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIEDMGQGRK 314
Query: 371 KAIVANPRACTLCRECIR-GVN-EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILE 198
+A VA PR C+LCRECIR GV + V+L RVK+HFIFTIESTG+ P+ LF EAVKILE
Sbjct: 315 RATVARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILE 374
Query: 197 EKCDR 183
+KC+R
Sbjct: 375 DKCER 379
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 468 bits (1203), Expect = e-129
Identities = 236/360 (65%), Positives = 286/360 (79%), Gaps = 5/360 (1%)
Frame = -2
Query: 1247 LDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNFK 1068
+++ DVP +L HL +TRV C+ DAP HTD ++YSGAY+ +GVDNS+ L+ F +NFK
Sbjct: 24 MNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCQNFK 82
Query: 1067 VEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHRL 888
VE+ +L++D+IEFDMIGID SLANAFRRILIAE+PTMAIE+V + NNTS+I DEVLSHRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 887 GLIPLDADPRLFEYLSE-NDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSEL- 714
GLIP++ADP LFEY NE+NTIV+KL V C+K PR TVK+ +LKWLPNGS+L
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRITVKSDELKWLPNGSDLI 202
Query: 713 -EMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKG 537
+ + +K K++TSFSCSQDSLPE SKKPLG + DII+AKLGPGQ IELE HAVKG
Sbjct: 203 ADDTKPNAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDIILAKLGPGQEIELEVHAVKG 262
Query: 536 IGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVA 357
+GK HAKWSPVA+AWYRMLPEVVL +V + A++LV KCPVNVFDIED+G G K+A V
Sbjct: 263 VGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCPVNVFDIEDIGKGRKRATVV 322
Query: 356 NPRACTLCRECIRGVN--EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCDR 183
PRACTLCRECIRG E+ V L RVK HFIFTIESTGA+ PE LF +AVKILE+KC+R
Sbjct: 323 KPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPEVLFTQAVKILEDKCER 382
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 467 bits (1202), Expect = e-129
Identities = 234/360 (65%), Positives = 287/360 (79%), Gaps = 5/360 (1%)
Frame = -2
Query: 1247 LDMPDVPMGQLPEHLNRQRTRVTCNADAPIHTDAVHYSGAYSLMGVDNSMGLEKFSKNFK 1068
+++ DVP +L HL +TRV C+ DAP HTD ++YSGAY+ +GVDNS+ L+ F +NFK
Sbjct: 24 MNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCRNFK 82
Query: 1067 VEIVRLSEDEIEFDMIGIDASLANAFRRILIAEIPTMAIEKVLMVNNTSLIADEVLSHRL 888
VE+ +L++D+IEFDMIGID SLANAFRRILIAE+PTMAIE+V + NNTS+I DEVLSHRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 887 GLIPLDADPRLFEYLSE-NDVPNERNTIVYKLEVSCKKDSPRNTVKTSQLKWLPNGSEL- 714
GLIP++ADP LFEY NE+NTIV+KL V C+K PR VK+ +LKWLPNGS+L
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRIIVKSDELKWLPNGSDLI 202
Query: 713 -EMATLDKSAKVKSYTSFSCSQDSLPEISKKPLGVKHDDIIIAKLGPGQAIELEAHAVKG 537
+ + +K K++TSFSCSQDSLPE SK+PLG + DII+AKLGPGQ IELE HAVKG
Sbjct: 203 ADDTKPNAGSKPKTFTSFSCSQDSLPEFSKRPLGPTYPDIILAKLGPGQEIELEVHAVKG 262
Query: 536 IGKVHAKWSPVASAWYRMLPEVVLLTEVKGQDAEKLVNKCPVNVFDIEDLGHGDKKAIVA 357
+GK HAKWSPVA+AWYRMLPEVVL+ +VK + A++LV KCPVNVFDIED+G G K+A V
Sbjct: 263 VGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADELVTKCPVNVFDIEDIGKGRKRATVV 322
Query: 356 NPRACTLCRECIRGVN--EELVELGRVKHHFIFTIESTGALSPEELFIEAVKILEEKCDR 183
PRACTLCRECIRG E+ V L RVK HFIFTIESTGA+ P+ LF +AVKILE+KC+R
Sbjct: 323 KPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCER 382