BLASTX nr result

ID: Zingiber25_contig00004638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00004638
         (1066 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT07395.1| hypothetical protein F775_05261 [Aegilops tauschii]     77   9e-12
gb|EMS67475.1| hypothetical protein TRIUR3_20224 [Triticum urartu]     77   9e-12
ref|XP_006367849.1| PREDICTED: protein SCAR2-like isoform X3 [So...    58   6e-06
ref|XP_006367848.1| PREDICTED: protein SCAR2-like isoform X2 [So...    58   6e-06
ref|XP_006367847.1| PREDICTED: protein SCAR2-like isoform X1 [So...    58   6e-06
ref|XP_002309170.1| hypothetical protein POPTR_0006s10650g [Popu...    58   7e-06

>gb|EMT07395.1| hypothetical protein F775_05261 [Aegilops tauschii]
          Length = 2273

 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +3

Query: 837  LIDAVVAHDRSKLRKVPEVASPSDEPKSDQMDTLLESNILQLR-KVSELARPSDKPKAEE 1013
            L+DAV AHDRS +RKV E+A P+D+P +D  +  LE    Q+R KV ELA  +DKP   +
Sbjct: 2152 LVDAVAAHDRSTMRKVSELAPPTDKPNTDDKNMWLE----QIRKKVGELAPTADKPNTND 2207

Query: 1014 KDALLEQIRNKSYNLKP 1064
            K+  LEQIRNK+++LKP
Sbjct: 2208 KNLWLEQIRNKTFDLKP 2224


>gb|EMS67475.1| hypothetical protein TRIUR3_20224 [Triticum urartu]
          Length = 2266

 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +3

Query: 837  LIDAVVAHDRSKLRKVPEVASPSDEPKSDQMDTLLESNILQLR-KVSELARPSDKPKAEE 1013
            L+DAV AHDRS +RKV E+A P+D+P +D  +  LE    Q+R KV ELA  +DKP   +
Sbjct: 2145 LVDAVAAHDRSTMRKVSELAPPTDKPNTDDKNLWLE----QIRNKVGELAPTADKPNTND 2200

Query: 1014 KDALLEQIRNKSYNLKP 1064
            K+  LEQIRNK+++LKP
Sbjct: 2201 KNLWLEQIRNKTFDLKP 2217


>ref|XP_006367849.1| PREDICTED: protein SCAR2-like isoform X3 [Solanum tuberosum]
          Length = 1798

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +3

Query: 870  KLRKVPEVASPSDEPKSDQMDTLLESNILQLRKVSELARPSDKPKAEEKDALLEQIRNKS 1049
            +LRKV E A P  + K D+ D+LL     QLRKV+E A P + PK +E+D+LLEQIR KS
Sbjct: 1695 QLRKVTERARPEIQ-KVDEKDSLL-----QLRKVTERAMP-EIPKVDERDSLLEQIRKKS 1747

Query: 1050 YNLKP 1064
            +NLKP
Sbjct: 1748 FNLKP 1752


>ref|XP_006367848.1| PREDICTED: protein SCAR2-like isoform X2 [Solanum tuberosum]
          Length = 1819

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +3

Query: 870  KLRKVPEVASPSDEPKSDQMDTLLESNILQLRKVSELARPSDKPKAEEKDALLEQIRNKS 1049
            +LRKV E A P  + K D+ D+LL     QLRKV+E A P + PK +E+D+LLEQIR KS
Sbjct: 1716 QLRKVTERARPEIQ-KVDEKDSLL-----QLRKVTERAMP-EIPKVDERDSLLEQIRKKS 1768

Query: 1050 YNLKP 1064
            +NLKP
Sbjct: 1769 FNLKP 1773


>ref|XP_006367847.1| PREDICTED: protein SCAR2-like isoform X1 [Solanum tuberosum]
          Length = 1821

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +3

Query: 870  KLRKVPEVASPSDEPKSDQMDTLLESNILQLRKVSELARPSDKPKAEEKDALLEQIRNKS 1049
            +LRKV E A P  + K D+ D+LL     QLRKV+E A P + PK +E+D+LLEQIR KS
Sbjct: 1718 QLRKVTERARPEIQ-KVDEKDSLL-----QLRKVTERAMP-EIPKVDERDSLLEQIRKKS 1770

Query: 1050 YNLKP 1064
            +NLKP
Sbjct: 1771 FNLKP 1775


>ref|XP_002309170.1| hypothetical protein POPTR_0006s10650g [Populus trichocarpa]
            gi|222855146|gb|EEE92693.1| hypothetical protein
            POPTR_0006s10650g [Populus trichocarpa]
          Length = 1465

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 35/76 (46%), Positives = 40/76 (52%)
 Frame = +3

Query: 837  LIDAVVAHDRSKLRKVPEVASPSDEPKSDQMDTLLESNILQLRKVSELARPSDKPKAEEK 1016
            LIDAV AHD+SKLRK                             V+EL RP   PK EE+
Sbjct: 1370 LIDAVAAHDKSKLRK-----------------------------VAELVRPQVGPKVEER 1400

Query: 1017 DALLEQIRNKSYNLKP 1064
            D+LLEQIR KS+NLKP
Sbjct: 1401 DSLLEQIRTKSFNLKP 1416


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