BLASTX nr result

ID: Zingiber25_contig00004572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00004572
         (390 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW82730.1| SOC1-like protein [Musa acuminata]                      61   2e-07

>gb|ABW82730.1| SOC1-like protein [Musa acuminata]
          Length = 68

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -1

Query: 390 QLKDKVRVLQEENIKLRQENHNHADAEAKLQVTASRDADPIHNTNM---AVETDLIIGRP 220
           QLKDKVRVL EEN+KL +E H     E +LQ+ ++RD    ++ N     VET+L+IGRP
Sbjct: 6   QLKDKVRVLXEENVKLHRERH----IEPQLQLASTRDVGXKNHGNQEIXEVETELVIGRP 61

Query: 219 GTREAKE 199
           G RE  E
Sbjct: 62  GIREVNE 68