BLASTX nr result
ID: Zingiber25_contig00004487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00004487
(718 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006430472.1| hypothetical protein CICLE_v10013047mg [Citr... 69 2e-09
ref|XP_006482011.1| PREDICTED: 50S ribosomal protein 5, chloropl... 67 8e-09
ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloropl... 67 8e-09
ref|NP_001235409.1| uncharacterized protein LOC100527134 [Glycin... 66 1e-08
emb|CBI32867.3| unnamed protein product [Vitis vinifera] 64 5e-08
ref|XP_004144312.1| PREDICTED: 50S ribosomal protein 5, chloropl... 64 6e-08
gb|ACU16054.1| unknown [Glycine max] 63 8e-08
ref|XP_002322592.2| ribosomal protein PsCL18 precursor [Populus ... 62 2e-07
ref|XP_006339242.1| PREDICTED: 50S ribosomal protein 5, chloropl... 62 2e-07
ref|XP_006854431.1| hypothetical protein AMTR_s00039p00213540 [A... 60 5e-07
ref|XP_004249337.1| PREDICTED: 50S ribosomal protein 5, chloropl... 59 2e-06
gb|EMJ19747.1| hypothetical protein PRUPE_ppa012848mg [Prunus pe... 57 5e-06
gb|EXC30756.1| hypothetical protein L484_027931 [Morus notabilis] 57 8e-06
>ref|XP_006430472.1| hypothetical protein CICLE_v10013047mg [Citrus clementina]
gi|557532529|gb|ESR43712.1| hypothetical protein
CICLE_v10013047mg [Citrus clementina]
Length = 145
Score = 68.6 bits (166), Expect = 2e-09
Identities = 47/140 (33%), Positives = 61/140 (43%)
Frame = +2
Query: 23 PCLSFGPSSPFASTHSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARAS 202
P +S PSS A + PV L + I P+S NGV +P R +I +AS
Sbjct: 9 PLMSLPPSSSSALAVAACPVSRLHFKA---IESHPKSSNGVWSCTPLVASKRGAVIVKAS 65
Query: 203 SETDGNEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXX 382
S+ DG + G+ P + ++E V V+ LPLES
Sbjct: 66 SDIDGTAPTDGGEPPSDSTKEVVPVDKLPLESKTQERLEQKMRMKLAKKIRLRRKRLVRK 125
Query: 383 XXXXXXGRWPPSKMKKLKNV 442
GRWPPSKMKKLKNV
Sbjct: 126 RRMRKKGRWPPSKMKKLKNV 145
>ref|XP_006482011.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Citrus
sinensis]
Length = 146
Score = 66.6 bits (161), Expect = 8e-09
Identities = 44/134 (32%), Positives = 59/134 (44%)
Frame = +2
Query: 41 PSSPFASTHSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARASSETDGN 220
PS S S++ P+ L + I P+S NGV +P R +I +ASS+ DG
Sbjct: 14 PSPSSLSALSVTACPVSRLHFKA-IESHPKSSNGVWSCTPLVASKRGAVIVKASSDIDGT 72
Query: 221 EGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 400
+ G+ P + ++E V V+ LPLES
Sbjct: 73 APTDGGEPPSDSTKEVVPVDKLPLESKTQERLEQKMRMKLAKKIRLRRKRLVRKRRMRKK 132
Query: 401 GRWPPSKMKKLKNV 442
GRWPPSKMKKLKNV
Sbjct: 133 GRWPPSKMKKLKNV 146
>ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Vitis
vinifera]
Length = 144
Score = 66.6 bits (161), Expect = 8e-09
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Frame = +2
Query: 29 LSFGPSSPFASTHSISPVPILVLRLQRHIIPQP----RSFNGVRVSSPSSLVDRRVLIAR 196
L + P + + + S+S + I + R ++ +SFNGVR+ +P ++ R +I +
Sbjct: 4 LQWSPLTSVSLSLSVSTMAITATPVSRFLVKPNDTHLKSFNGVRLHAPFTVKQRDGVIVK 63
Query: 197 ASSETDGNEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXX 376
ASS+ DG + G+T E ++ V VENLPLES
Sbjct: 64 ASSDVDG-VAPDGGETASEGEEDVVPVENLPLESKLQLKLEQKLRMKIAKKIRLRRKRLV 122
Query: 377 XXXXXXXXGRWPPSKMKKLKNV 442
GRWPPSKMKK KNV
Sbjct: 123 RKRRMRKKGRWPPSKMKKNKNV 144
>ref|NP_001235409.1| uncharacterized protein LOC100527134 [Glycine max]
gi|255631630|gb|ACU16182.1| unknown [Glycine max]
Length = 147
Score = 65.9 bits (159), Expect = 1e-08
Identities = 44/133 (33%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Frame = +2
Query: 47 SPFASTHSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARASSETDGNEG 226
SP + S +P I+P P+ NGVR+S+P + ++ A A + EG
Sbjct: 16 SPLLPSSSTFALPTTSASRTNVILP-PKPLNGVRISTPKRRTESVIVSAAAEDASSAVEG 74
Query: 227 GEPGDTPPEQSQEA-VSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 403
G P P E +E+ SVE LPLES G
Sbjct: 75 GSPPPPPAESEKESGASVEKLPLESKVKEREEQKLRMKLAKKIRLRRKRLLRKRKLRKKG 134
Query: 404 RWPPSKMKKLKNV 442
RWPPSKMKKLKNV
Sbjct: 135 RWPPSKMKKLKNV 147
>emb|CBI32867.3| unnamed protein product [Vitis vinifera]
Length = 124
Score = 63.9 bits (154), Expect = 5e-08
Identities = 39/105 (37%), Positives = 51/105 (48%)
Frame = +2
Query: 128 RSFNGVRVSSPSSLVDRRVLIARASSETDGNEGGEPGDTPPEQSQEAVSVENLPLESXXX 307
+SFNGVR+ +P ++ R +I +ASS+ DG + G+T E ++ V VENLPLES
Sbjct: 21 KSFNGVRLHAPFTVKQRDGVIVKASSDVDG-VAPDGGETASEGEEDVVPVENLPLESKLQ 79
Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 442
GRWPPSKMKK KNV
Sbjct: 80 LKLEQKLRMKIAKKIRLRRKRLVRKRRMRKKGRWPPSKMKKNKNV 124
>ref|XP_004144312.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Cucumis
sativus]
Length = 153
Score = 63.5 bits (153), Expect = 6e-08
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +2
Query: 74 SPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARASSETDGNEGGEPGDTPP- 250
S +P +L L + I QP+ FNGVR+ + S + + L+ +A+SETD + D P
Sbjct: 30 SAIPSSML-LMKPIGFQPKHFNGVRLRNHSFVENTASLVVKAASETDATGETDSSDVQPA 88
Query: 251 -EQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMK 427
E +E V V+ LPLES GRWPPSKMK
Sbjct: 89 AEAKKEDVPVDKLPLESKLQERLEQKARMKLAKKIRLRRKRLVQKRHLRKKGRWPPSKMK 148
Query: 428 KLKNV 442
KLKNV
Sbjct: 149 KLKNV 153
>gb|ACU16054.1| unknown [Glycine max]
Length = 183
Score = 63.2 bits (152), Expect = 8e-08
Identities = 54/171 (31%), Positives = 67/171 (39%), Gaps = 4/171 (2%)
Frame = +2
Query: 47 SPFASTHSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARASSETDGNEG 226
SP S+ S +P + H+I P+ NGVR S+P D V+ A A
Sbjct: 11 SPLFSSSSTFALPTTAAS-RVHVILPPKPLNGVRFSAPKRRTDAVVVSAAAEDSIS---- 65
Query: 227 GEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGR 406
P P E +E VSVE LPLES GR
Sbjct: 66 --PPVPPAESEKENVSVEKLPLESKLKEREEQKLRMKLAKKIRLRRKRLLRKRRLRKKGR 123
Query: 407 WPPSKMKKLKNV*SVMV*ISGWSSLAVLHFIFLYFVMVKVCL----NLIAF 547
WPPSKMKKLKNV V + LH F F+ +C+ N +AF
Sbjct: 124 WPPSKMKKLKNVWIVNFNFCRFK----LHCSFSNFIFQLMCMVYFDNFVAF 170
>ref|XP_002322592.2| ribosomal protein PsCL18 precursor [Populus trichocarpa]
gi|550320685|gb|EEF04353.2| ribosomal protein PsCL18
precursor [Populus trichocarpa]
Length = 147
Score = 62.0 bits (149), Expect = 2e-07
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Frame = +2
Query: 23 PCLSFGPSSPFAS-THSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARA 199
P S PF+S T + P+ L ++ + + +++NGVR +P +I RA
Sbjct: 8 PLTSLSSLPPFSSPTLAFIATPVSRLDVKAFEL-KFKTWNGVRFQNPIRGNRIGAVIVRA 66
Query: 200 SSETDGNEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXX 379
SS+ DG E + P E +E V+V+ LPLES
Sbjct: 67 SSDIDGTAPTETSEPPVESKEEVVAVDKLPLESKLQEREEQKMKMKLARKIRLRRNRLVR 126
Query: 380 XXXXXXXGRWPPSKMKKLKNV 442
GRWPPSKMKKLKNV
Sbjct: 127 KRRMRKKGRWPPSKMKKLKNV 147
>ref|XP_006339242.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Solanum
tuberosum]
Length = 149
Score = 61.6 bits (148), Expect = 2e-07
Identities = 47/140 (33%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Frame = +2
Query: 29 LSFGPSSPFASTHSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARASSE 208
LS PSS S S P + HI P+S+ + +P R LIA A+++
Sbjct: 15 LSSHPSS--TSQASAFPASLSSRFCNNHITLTPKSYANGNIQAPFIFKRRGALIATAAAD 72
Query: 209 TD--GNEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXX 382
D G++ EP PE+++E+V VENLPLES
Sbjct: 73 IDSVGSDNPEPS---PEKNEESVPVENLPLESKLQEKLEQKMKMKLAKKIRLRRKRLVRK 129
Query: 383 XXXXXXGRWPPSKMKKLKNV 442
GRWPPSKMKK KNV
Sbjct: 130 RHLRKKGRWPPSKMKKNKNV 149
>ref|XP_006854431.1| hypothetical protein AMTR_s00039p00213540 [Amborella trichopoda]
gi|548858107|gb|ERN15898.1| hypothetical protein
AMTR_s00039p00213540 [Amborella trichopoda]
Length = 149
Score = 60.5 bits (145), Expect = 5e-07
Identities = 50/135 (37%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +2
Query: 41 PSSPFASTHSISPVPILVLRLQ-RHIIPQPRSFNGVRVSSPSSLVDRRVLIARASSETDG 217
PSS +S+ ++ + R Q R Q + NGV +S P R L RASS DG
Sbjct: 21 PSSFLSSSRAVPFTFLSASRFQGREPNLQFQVVNGVGISRPF-----RSLEVRASSGLDG 75
Query: 218 NEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 397
E E + P + S+E+VSVENLPLES
Sbjct: 76 -EVSEGDNEPEKSSEESVSVENLPLESKLQEKLAAKLRMKLAKKIRLRRKRLLRKRRLRK 134
Query: 398 XGRWPPSKMKKLKNV 442
GRWPPSKMKKLKNV
Sbjct: 135 KGRWPPSKMKKLKNV 149
>ref|XP_004249337.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Solanum
lycopersicum]
Length = 149
Score = 58.5 bits (140), Expect = 2e-06
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Frame = +2
Query: 23 PCLSFGPSSPFASTHSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARAS 202
P + S S S P + H P+S+ + +P R LIA A+
Sbjct: 11 PSVLLSSQSSSTSQASAFPASLSSRFCNNHFTLTPKSYANGYIQAPFIFQRRGALIATAA 70
Query: 203 SETD--GNEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXX 376
++ D G++ EP PE+ +E+V VENLPLES
Sbjct: 71 ADIDSVGSDNPEPS---PEKKEESVPVENLPLESKLQEKLEQKMKMKLAKKLRLRRKRLV 127
Query: 377 XXXXXXXXGRWPPSKMKKLKNV 442
GRWPPSKMKK KNV
Sbjct: 128 RKRHLRKKGRWPPSKMKKNKNV 149
>gb|EMJ19747.1| hypothetical protein PRUPE_ppa012848mg [Prunus persica]
Length = 152
Score = 57.4 bits (137), Expect = 5e-06
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Frame = +2
Query: 44 SSPFASTHSISPVPILVLRLQ-RHIIPQPRSFNGVRVSSPSSLVDR-RVLIARASSETDG 217
SSPF ++ S + + RL+ + P+SF+GV + P+ V R ++ +ASS+ DG
Sbjct: 20 SSPFPTSSSSTAATAIFSRLRLKPTDAHPKSFSGVCLRMPA--VKRFPSVVGKASSDIDG 77
Query: 218 NEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 397
+ + + +E V V+ LPLES
Sbjct: 78 TSPTQSSEPVSDTKKEVVPVDKLPLESKLQERLEQKAKMQLAKKIRLRRKRLVRKRKLRK 137
Query: 398 XGRWPPSKMKKLKNV 442
GRWPPSKMKKLKNV
Sbjct: 138 KGRWPPSKMKKLKNV 152
>gb|EXC30756.1| hypothetical protein L484_027931 [Morus notabilis]
Length = 144
Score = 56.6 bits (135), Expect = 8e-06
Identities = 43/138 (31%), Positives = 59/138 (42%)
Frame = +2
Query: 29 LSFGPSSPFASTHSISPVPILVLRLQRHIIPQPRSFNGVRVSSPSSLVDRRVLIARASSE 208
LS SS +S S + +P + + I P SF+GVR+ P + ++ +ASSE
Sbjct: 15 LSASSSSSSSSFLSATAIPTISRLQIKPIDLHPNSFSGVRLQMPFVVSRSCSVVVKASSE 74
Query: 209 TDGNEGGEPGDTPPEQSQEAVSVENLPLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 388
+ + + +EAVSV+ LPLES
Sbjct: 75 SS--------EALSDGKEEAVSVDKLPLESKLQERLEQKLKMKLAKKIRLRRKRLVRKRR 126
Query: 389 XXXXGRWPPSKMKKLKNV 442
GRWPPSKMKKLKNV
Sbjct: 127 LRKKGRWPPSKMKKLKNV 144