BLASTX nr result
ID: Zingiber25_contig00004468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00004468
(364 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004969006.1| PREDICTED: protein transport protein Sec61 s... 76 4e-12
gb|EAY74575.1| hypothetical protein OsI_02463 [Oryza sativa Indi... 75 9e-12
ref|NP_001043359.1| Os01g0565900 [Oryza sativa Japonica Group] g... 75 9e-12
ref|NP_001151680.1| protein transport protein Sec61 beta subunit... 74 2e-11
ref|NP_001151814.1| protein transport protein Sec61 beta subunit... 74 2e-11
gb|EMS54660.1| hypothetical protein TRIUR3_13287 [Triticum urart... 74 3e-11
ref|XP_003569225.1| PREDICTED: protein transport protein Sec61 s... 74 3e-11
dbj|BAK04550.1| predicted protein [Hordeum vulgare subsp. vulgare] 74 3e-11
gb|ACG36913.1| protein transport protein Sec61 beta subunit [Zea... 74 3e-11
gb|ACF80471.1| unknown [Zea mays] gi|195617778|gb|ACG30719.1| pr... 74 3e-11
gb|EMT14993.1| hypothetical protein F775_00583 [Aegilops tauschii] 73 3e-11
ref|XP_003572331.1| PREDICTED: protein transport protein Sec61 s... 73 3e-11
gb|ACG31189.1| protein transport protein Sec61 beta subunit [Zea... 73 3e-11
tpg|DAA58599.1| TPA: hypothetical protein ZEAMMB73_842470 [Zea m... 72 6e-11
ref|NP_001176812.1| Os12g0173366 [Oryza sativa Japonica Group] g... 72 8e-11
ref|XP_002511645.1| Protein transport protein Sec61 subunit beta... 72 8e-11
gb|ACG39122.1| protein transport protein Sec61 beta subunit [Zea... 72 8e-11
ref|XP_002302515.1| sec61beta family protein [Populus trichocarp... 72 8e-11
ref|XP_002326819.1| predicted protein [Populus trichocarpa] gi|5... 72 8e-11
ref|XP_004966286.1| PREDICTED: protein transport protein Sec61 s... 72 1e-10
>ref|XP_004969006.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Setaria italica]
Length = 81
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+A GAKMSPNTVL MSIGFIAVVA+LHVFGKLY
Sbjct: 37 SMLQFYTDEAAGAKMSPNTVLIMSIGFIAVVAMLHVFGKLY 77
>gb|EAY74575.1| hypothetical protein OsI_02463 [Oryza sativa Indica Group]
Length = 80
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYTD+A G KMSPN+VL MSIGFIAVVALLHVFGKLY
Sbjct: 36 TMLQFYTDEAAGRKMSPNSVLIMSIGFIAVVALLHVFGKLY 76
>ref|NP_001043359.1| Os01g0565900 [Oryza sativa Japonica Group]
gi|113532890|dbj|BAF05273.1| Os01g0565900 [Oryza sativa
Japonica Group] gi|125570852|gb|EAZ12367.1| hypothetical
protein OsJ_02256 [Oryza sativa Japonica Group]
gi|215686842|dbj|BAG89692.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 80
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYTD+A G KMSPN+VL MSIGFIAVVALLHVFGKLY
Sbjct: 36 TMLQFYTDEAAGRKMSPNSVLIMSIGFIAVVALLHVFGKLY 76
>ref|NP_001151680.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195648556|gb|ACG43746.1| protein transport protein
Sec61 beta subunit [Zea mays]
gi|195648765|gb|ACG43850.1| protein transport protein
Sec61 beta subunit [Zea mays]
gi|223948227|gb|ACN28197.1| unknown [Zea mays]
gi|414881461|tpg|DAA58592.1| TPA: protein transport
protein Sec61 beta subunit isoform 1 [Zea mays]
gi|414881462|tpg|DAA58593.1| TPA: protein transport
protein Sec61 beta subunit isoform 2 [Zea mays]
gi|414881463|tpg|DAA58594.1| TPA: protein transport
protein Sec61 beta subunit isoform 3 [Zea mays]
gi|414881464|tpg|DAA58595.1| TPA: protein transport
protein Sec61 beta subunit isoform 4 [Zea mays]
Length = 81
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+A G KMSPNTVL MSIGFIAVVA+LHVFGKLY
Sbjct: 37 SMLQFYTDEAAGRKMSPNTVLIMSIGFIAVVAMLHVFGKLY 77
>ref|NP_001151814.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|242053325|ref|XP_002455808.1| hypothetical protein
SORBIDRAFT_03g025540 [Sorghum bicolor]
gi|195616442|gb|ACG30051.1| protein transport protein
Sec61 beta subunit [Zea mays]
gi|195649877|gb|ACG44406.1| protein transport protein
Sec61 beta subunit [Zea mays]
gi|241927783|gb|EES00928.1| hypothetical protein
SORBIDRAFT_03g025540 [Sorghum bicolor]
Length = 81
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+A G KMSPNTVL MSIGFIAVVA+LHVFGKLY
Sbjct: 37 SMLQFYTDEAAGRKMSPNTVLIMSIGFIAVVAMLHVFGKLY 77
>gb|EMS54660.1| hypothetical protein TRIUR3_13287 [Triticum urartu]
gi|475446258|gb|EMT01562.1| hypothetical protein
F775_32909 [Aegilops tauschii]
Length = 83
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYTD+A G KMSPN VL MSIGFIAVVA+LHVFGKLY
Sbjct: 39 TMLQFYTDEAAGRKMSPNAVLIMSIGFIAVVAVLHVFGKLY 79
>ref|XP_003569225.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform 1 [Brachypodium distachyon]
gi|357135254|ref|XP_003569226.1| PREDICTED: protein
transport protein Sec61 subunit beta-like isoform 2
[Brachypodium distachyon]
Length = 83
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYTD+A G KMSPN VL MSIGFIAVVA+LHVFGKLY
Sbjct: 39 TMLQFYTDEAAGRKMSPNAVLIMSIGFIAVVAVLHVFGKLY 79
>dbj|BAK04550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 83
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYTD+A G KMSPN VL MSIGFIAVVA+LHVFGKLY
Sbjct: 39 TMLQFYTDEAAGRKMSPNAVLIMSIGFIAVVAVLHVFGKLY 79
>gb|ACG36913.1| protein transport protein Sec61 beta subunit [Zea mays]
Length = 81
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+A G KMSPNTVL MSIGF+AVVA+LHVFGKLY
Sbjct: 37 SMLQFYTDEAAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLY 77
>gb|ACF80471.1| unknown [Zea mays] gi|195617778|gb|ACG30719.1| protein transport
protein Sec61 beta subunit [Zea mays]
gi|413950400|gb|AFW83049.1| hypothetical protein
ZEAMMB73_850057 [Zea mays]
Length = 81
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+A G KMSPNTVL MSIGF+AVVA+LHVFGKLY
Sbjct: 37 SMLQFYTDEAAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLY 77
>gb|EMT14993.1| hypothetical protein F775_00583 [Aegilops tauschii]
Length = 146
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYTD+A G KMSPN VL MSIGF+AVVA+LHVFGKLY
Sbjct: 105 TMLQFYTDEAAGRKMSPNAVLIMSIGFVAVVAVLHVFGKLY 145
>ref|XP_003572331.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Brachypodium distachyon]
Length = 81
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYTD+A G KMSPN VL MS+GFIAVVA+LHVFGKLY
Sbjct: 37 TMLQFYTDEAAGRKMSPNAVLIMSVGFIAVVAVLHVFGKLY 77
>gb|ACG31189.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195637892|gb|ACG38414.1| protein transport protein
Sec61 beta subunit [Zea mays]
Length = 44
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2
Query: 200 MLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
MLQFYTD+A G KMSPNTVL MSIGF+AVVA+LHVFGKLY
Sbjct: 1 MLQFYTDEAAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLY 40
>tpg|DAA58599.1| TPA: hypothetical protein ZEAMMB73_842470 [Zea mays]
Length = 81
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+A G KMSPNTVL M IGFIA+VA+LHVFGKLY
Sbjct: 37 SMLQFYTDEAAGRKMSPNTVLIMGIGFIAIVAMLHVFGKLY 77
>ref|NP_001176812.1| Os12g0173366 [Oryza sativa Japonica Group]
gi|77553785|gb|ABA96581.1| Sec61beta family protein,
expressed [Oryza sativa Japonica Group]
gi|125535942|gb|EAY82430.1| hypothetical protein
OsI_37643 [Oryza sativa Indica Group]
gi|125578660|gb|EAZ19806.1| hypothetical protein
OsJ_35385 [Oryza sativa Japonica Group]
gi|215768668|dbj|BAH00897.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255670093|dbj|BAH95540.1| Os12g0173366 [Oryza sativa
Japonica Group]
Length = 83
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
TMLQFYT++A G KMSPN VL MSIGF AVVALLHVFGKLY
Sbjct: 38 TMLQFYTEEAAGCKMSPNAVLIMSIGFFAVVALLHVFGKLY 78
>ref|XP_002511645.1| Protein transport protein Sec61 subunit beta, putative [Ricinus
communis] gi|223548825|gb|EEF50314.1| Protein transport
protein Sec61 subunit beta, putative [Ricinus communis]
Length = 82
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLYLAR 328
TMLQFYTDD++G K+SPN VL MSIGFIA VA+LHV GKLYL R
Sbjct: 36 TMLQFYTDDSSGLKISPNVVLIMSIGFIAFVAILHVVGKLYLVR 79
>gb|ACG39122.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195657837|gb|ACG48386.1| protein transport protein
Sec61 beta subunit [Zea mays]
Length = 81
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+ G KMSPNTVL MSIGF+AVVA+LHVFGKLY
Sbjct: 37 SMLQFYTDETAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLY 77
>ref|XP_002302515.1| sec61beta family protein [Populus trichocarpa]
gi|566158011|ref|XP_006386558.1| hypothetical protein
POPTR_0002s14410g [Populus trichocarpa]
gi|118481855|gb|ABK92864.1| unknown [Populus
trichocarpa] gi|222844241|gb|EEE81788.1| sec61beta
family protein [Populus trichocarpa]
gi|550345009|gb|ERP64355.1| hypothetical protein
POPTR_0002s14410g [Populus trichocarpa]
Length = 84
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLYLAR 328
TMLQFYTDDA G K+SPN VL MSIGFIA VA+LHV GKLYL R
Sbjct: 38 TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLYLVR 81
>ref|XP_002326819.1| predicted protein [Populus trichocarpa]
gi|566202809|ref|XP_006375273.1| Protein transport
protein SEC61 beta subunit [Populus trichocarpa]
gi|566202811|ref|XP_006375274.1| hypothetical protein
POPTR_0014s05810g [Populus trichocarpa]
gi|118486407|gb|ABK95043.1| unknown [Populus
trichocarpa] gi|550323592|gb|ERP53070.1| Protein
transport protein SEC61 beta subunit [Populus
trichocarpa] gi|550323593|gb|ERP53071.1| hypothetical
protein POPTR_0014s05810g [Populus trichocarpa]
Length = 82
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLYLAR 328
TMLQFYTDDA G K+SPN VL MSIGFIA VA+LHV GKLYL R
Sbjct: 36 TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLYLVR 79
>ref|XP_004966286.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform X1 [Setaria italica]
gi|514767617|ref|XP_004966287.1| PREDICTED: protein
transport protein Sec61 subunit beta-like isoform X2
[Setaria italica]
Length = 81
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2
Query: 197 TMLQFYTDDATGAKMSPNTVLFMSIGFIAVVALLHVFGKLY 319
+MLQFYTD+A G KMSPNTVL MSIG +AVVA+LHVFGKLY
Sbjct: 37 SMLQFYTDEAAGRKMSPNTVLIMSIGIVAVVAMLHVFGKLY 77