BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00004294
         (2940 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub...  1209   0.0  
ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I sub...  1160   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1157   0.0  
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1157   0.0  
ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [A...  1139   0.0  
gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triti...  1117   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1096   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1082   0.0  
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus...  1069   0.0  
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]  1057   0.0  
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...  1055   0.0  
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...  1054   0.0  
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...  1052   0.0  
gb|EMT12934.1| DNA-directed RNA polymerase I subunit RPA1 [Aegil...  1050   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1050   0.0  
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...  1049   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1048   0.0  
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...  1047   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...  1047   0.0  
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...  1043   0.0  

>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
            italica]
          Length = 1682

 Score = 1209 bits (3129), Expect = 0.0
 Identities = 617/943 (65%), Positives = 734/943 (77%), Gaps = 20/943 (2%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKES 181
            +MEHPQN LL+KVQ+AN+AL+  +  SN+ D+LRRWMDLQRSVNVLYDS+KG+ KSEK +
Sbjct: 370  IMEHPQNVLLSKVQEANLALQHNSASSNHMDVLRRWMDLQRSVNVLYDSSKGIVKSEKNA 429

Query: 182  NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 361
            +GIRQLLEKK GILRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP FA RLTYPE+VTP
Sbjct: 430  HGIRQLLEKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFATRLTYPEKVTP 489

Query: 362  WNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMGP 541
            WN KKL+ AV NGADIHPGATHY+D   +YKLQA+   R  I++ LP SR   +Q G  P
Sbjct: 490  WNAKKLQEAVRNGADIHPGATHYRDNSNIYKLQAAPAKRRAIAKMLPASRGSISQPGKDP 549

Query: 542  ESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNADF 721
              +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GEKTIRMHYANCSTYNADF
Sbjct: 550  NCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHYANCSTYNADF 609

Query: 722  DGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFLT 901
            DGDEMNVH PQDEISR+EA+NI +ANKQYI P SG  +RGLIQDHIV AVLLTK DT L+
Sbjct: 610  DGDEMNVHFPQDEISRAEAMNIVDANKQYIGPRSGDAVRGLIQDHIVGAVLLTKQDTLLS 669

Query: 902  REEYHQLIYVSCMPPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVITAIL 1081
            REEY QL+Y SC+ P+++   + G K S    ++ +  + PAI KP PLWTGKQVIT IL
Sbjct: 670  REEYSQLVYGSCV-PSNWGPRQPGIKVSAIKDDDALGFVLPAILKPKPLWTGKQVITTIL 728

Query: 1082 NYVTRGCLPFTIEKKGRIQKEYIGNDS------------AQLVLHIYNNELIHGMIDKAQ 1225
            N++T+G  PFT+E+KG+I +E++                ++LVL+I NNELI GMIDKAQ
Sbjct: 729  NHLTKGRSPFTVEQKGKISEEHLTPKKFEESESERKIAISELVLYIKNNELIKGMIDKAQ 788

Query: 1226 FGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRSSDMERDRIL 1405
            FG YG+VH VHELYG D AG LLS FSRLFT FLQ HGFTCGVDDLLL + +D  R  I+
Sbjct: 789  FGQYGIVHTVHELYGADTAGILLSTFSRLFTLFLQFHGFTCGVDDLLLCQKADEARRSII 848

Query: 1406 EKSEMLSEEVHRRFTRMKDDDKDPMKLQGEIEKVLRGHGESATALLDRMMSNAMNSLTSE 1585
             +S+  SE+ H  F +     KD  +LQ E+EKV+R  GESAT  +DR +SNA++++TS+
Sbjct: 849  SESDKYSEKAHGTFIK---TGKDGEELQMEVEKVIRRDGESATVNMDREISNALSNITSD 905

Query: 1586 INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTL 1765
            +N+ +FP GL K F  NCL+LMTATGAKGG VNM QISSLLGQQELEGKRVPRMVSGKTL
Sbjct: 906  VNKNVFPYGLQKPFPGNCLTLMTATGAKGGDVNMYQISSLLGQQELEGKRVPRMVSGKTL 965

Query: 1766 PCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKN 1945
            PCF PWD SSR+GGFISDRFLTGLRPQEYYFHCMAGR+GL DTA+KTSRSGYLQRCL+K 
Sbjct: 966  PCFLPWDTSSRAGGFISDRFLTGLRPQEYYFHCMAGREGLCDTAVKTSRSGYLQRCLIKC 1025

Query: 1946 LECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFNDQMVD 2125
            LE LKVSYD+TVRD DGS+VQF YGEDGVDVLK+S++++FK L+DN+KVVL K      +
Sbjct: 1026 LESLKVSYDHTVRDVDGSIVQFCYGEDGVDVLKTSFLNKFKELADNKKVVLDKIKGHKQN 1085

Query: 2126 ATLEKSNIFINKLPSSLKEGAIDFIS--KNQKRSPHQ------IXXXXXXXXXXXXYLTS 2281
              L K N +I  LP  L   A +F+   K +K S  +      I            YL S
Sbjct: 1086 QLLSKPNGYITTLPKKLVAEAKEFLKLLKEKKSSDIKKGLMCDIKKKGLMKLLKVKYLYS 1145

Query: 2282 LADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPL 2461
            L DPGE+VGV+AAQS+GEPSTQMTLNTFHLAG+G+MNVTLGIPRL+EILMTAS +I TP+
Sbjct: 1146 LVDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLKEILMTASANISTPI 1205

Query: 2462 MNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYKLKMTLYPS 2641
            M CPL    T+DDA R++AKLRRV VAD+VEK+EVCTVPF      ++T+YKL+M LYP 
Sbjct: 1206 MVCPLLEKWTRDDARRVAAKLRRVRVADIVEKIEVCTVPFYNTNGHVSTLYKLQMKLYPQ 1265

Query: 2642 KLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            K YP   +LT+++C   +RT FVDAME AI KHLD++H+I++I
Sbjct: 1266 KHYPPQSDLTVDECQTTLRTVFVDAMEHAIEKHLDLLHKINEI 1308


>ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
            [Brachypodium distachyon]
          Length = 1868

 Score = 1160 bits (3000), Expect = 0.0
 Identities = 588/940 (62%), Positives = 718/940 (76%), Gaps = 17/940 (1%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKES 181
            +MEHPQN LL KVQ+AN+A++      N+ DI+ RW DLQ SVN+ YDS+KG G  + + 
Sbjct: 567  IMEHPQNVLLGKVQEANLAVQHDKAHPNHMDIITRWRDLQTSVNLFYDSSKGFGNGDGDG 626

Query: 182  NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 361
            NGIRQLL+KK G++RQKMMGKRVN +CR+VISPDP+LAVNEIGIPP  AL++TYPE V P
Sbjct: 627  NGIRQLLDKKGGVIRQKMMGKRVNHSCRTVISPDPFLAVNEIGIPPQAALKMTYPENVMP 686

Query: 362  WNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMGP 541
             N KKL+ A+ NG  IHPGATHYK    MYKLQ  +  R  I++ LP SR   +Q G  P
Sbjct: 687  CNAKKLQEAINNGCGIHPGATHYKVNKNMYKLQDDRSKRRAIAKMLPASRGSISQPGKDP 746

Query: 542  ESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNADF 721
            + +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GEKTIRMHYANCSTYNADF
Sbjct: 747  KCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHYANCSTYNADF 806

Query: 722  DGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFLT 901
            DGDEMNVH PQDEISR+EA+NI +ANKQYI P SG  +RGLIQDHIVSAVLLTKLDTF++
Sbjct: 807  DGDEMNVHFPQDEISRAEAMNIVDANKQYIGPRSGDAVRGLIQDHIVSAVLLTKLDTFIS 866

Query: 902  REEYHQLIYVSCMPPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVITAIL 1081
            REEY QL+Y SC+  T  +  + G++ S+    + ++ LPPAI KP PLWTGKQVIT IL
Sbjct: 867  REEYSQLVYGSCVSSTR-SPCQSGKRVSVMKDGDILELLPPAILKPKPLWTGKQVITTIL 925

Query: 1082 NYVTRGCLPFTIEKKGRIQKEYI-----------GNDSAQLVLHIYNNELIHGMIDKAQF 1228
            N++T+G  PFT+EKKG+I  +Y+             DS Q VL+I++NELI GMIDK QF
Sbjct: 926  NHLTKGHPPFTVEKKGKIPVKYLIPKERHGDKDNAKDSEQ-VLYIHDNELIKGMIDKDQF 984

Query: 1229 GTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRSSDMERDRILE 1408
            G YG+VH V+ELYG + AG LLS+FSRLFT FLQ+HGFTCG+DDLLL + SD +R   L 
Sbjct: 985  GNYGIVHTVYELYGAETAGRLLSIFSRLFTLFLQLHGFTCGIDDLLLFQESDKQRTETLM 1044

Query: 1409 KSEMLSEEVHRRFTRMKDDDKDPMKLQGEIEKVLRGHGESATALLDRMMSNAMNSLTSEI 1588
             SE  SEEVHR+FT   D D+DP+KLQ E+EKV+R  GESAT  LD+MM +A+N L SE+
Sbjct: 1045 TSEKCSEEVHRKFTCAGDYDEDPLKLQMEVEKVVRRIGESATDTLDKMMLSALNGLQSEV 1104

Query: 1589 NQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLP 1768
            N+ LFP GL K F  NCL+LMTATGAKGG VNMTQI+SLLG Q+LEG RVPRM+SGK+LP
Sbjct: 1105 NRRLFPYGLQKPFPRNCLTLMTATGAKGGEVNMTQITSLLGSQDLEGARVPRMISGKSLP 1164

Query: 1769 CFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKNL 1948
            CFPPWD SSR+GGF+SDRFLTGLRPQEYYFHCMAGR+GL+DTA+KTSRSGYLQRCLVK+L
Sbjct: 1165 CFPPWDTSSRAGGFVSDRFLTGLRPQEYYFHCMAGRNGLIDTAVKTSRSGYLQRCLVKSL 1224

Query: 1949 ECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISE------FKMLSDNQKVVLQKFN 2110
            E L V+YD+TVR+ DGS+VQF YGEDGVDV KS+++ +      FK L+DN+K VL +  
Sbjct: 1225 ESLFVAYDHTVRNVDGSIVQFRYGEDGVDVHKSNFLDKFQDKDMFKELADNRKAVLDRLG 1284

Query: 2111 DQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQKRSPHQIXXXXXXXXXXXXYLTSLAD 2290
                D    +SN +I +LP +L + A  F+SK++ R  H I            YL SL D
Sbjct: 1285 RYTGDHMSLQSN-YITELPEALTDRATKFLSKDKGRCRHDIKEDELMNLLKAKYLASLVD 1343

Query: 2291 PGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPLMNC 2470
            PGE+VGVI AQS+GEPSTQMTLNTFH AG+ D+NVTLG+PR+QEILM AS +I TP+M C
Sbjct: 1344 PGEAVGVILAQSLGEPSTQMTLNTFHFAGRSDVNVTLGMPRIQEILMKASANIATPVMMC 1403

Query: 2471 PLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYKLKMTLYPSKLY 2650
            PL    T DDAERL+AKLR V + D+VE +EVCTVPF      ++++YKL++ L+P + Y
Sbjct: 1404 PLLEDVTWDDAERLAAKLRGVRLVDIVEGIEVCTVPFYNNNGYVSSLYKLQIKLFPPERY 1463

Query: 2651 PAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            P   ELT+++C   +RT FVD+ME AI KHL +++R+S I
Sbjct: 1464 PPQSELTVDECQTALRTVFVDSMEFAIEKHLKLLYRVSGI 1503


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1157 bits (2993), Expect = 0.0
 Identities = 594/954 (62%), Positives = 717/954 (75%), Gaps = 31/954 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ  LL KV QANIAL +    +S  + I+ RWMDLQ+S+NVL+D     G+ +++
Sbjct: 358  VMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRD 417

Query: 179  S-NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 355
            + +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE+V
Sbjct: 418  TGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKV 477

Query: 356  TPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGM 535
            TPWNV KLR A++NG +IHPGATHY D+    KL  +K MR  ISRKLP+SR V AQ G 
Sbjct: 478  TPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGR 537

Query: 536  GPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNA 715
              +++FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNA
Sbjct: 538  SSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNA 597

Query: 716  DFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTF 895
            DFDGDEMNVH PQDEISR+EA NI NAN QYIVP+ G PIRGLIQDHIVSAVLLTK DTF
Sbjct: 598  DFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTF 657

Query: 896  LTREEYHQLIYVSCMPPTSYAQ-NRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVIT 1072
            LTRE+Y+QL+Y S +   S +   + G+K S+  SE+E+QPL PAIWKP PLW+GKQVIT
Sbjct: 658  LTREQYNQLLYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVIT 717

Query: 1073 AILNYVTRGCLPFTIEKKGRIQKEYIGND-------------------------SAQLVL 1177
            A+LN++TRG  PFT EK G+I +EY G++                           +  L
Sbjct: 718  AVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKL 777

Query: 1178 HIYNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVD 1357
             I+ NEL+ G+IDKAQF  YGLVH V ELYG + AG LLSV SRLFT FLQMHGFTCGVD
Sbjct: 778  LIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVD 837

Query: 1358 DLLLKRSSDMERDRILEKSEMLSEEVHRRFTRMKDDDKDPMKLQGEIEKVLRGHGESATA 1537
            DLL+  + D+ R   L+KSE + E VH +F        DP+KLQ E+EK++  +GE+A  
Sbjct: 838  DLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAIT 897

Query: 1538 LLDRMMSNAMNSLTSEINQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQ 1717
             LDRMM N +N LTS++N+ L   GL K F  NCLSLMT TGAKG  VN +QISS LGQQ
Sbjct: 898  RLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQ 957

Query: 1718 ELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA 1897
            +LEGKRVPRMVSGKTLPCFPPWD ++R+GGFISDRFLTGL PQEYYFHCMAGR+GLVDTA
Sbjct: 958  DLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTA 1017

Query: 1898 IKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLS 2077
            +KTSRSGYLQRCL+KNLECLKV YDYTVRD+DGS+VQF YG+DGVDV ++S+I+EF+ L+
Sbjct: 1018 VKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALA 1077

Query: 2078 DNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFIS---KNQKRSPHQIXXXXX 2248
             N++VV +KF          K N +I KLP  L++    FI    + ++   +       
Sbjct: 1078 VNEEVVCEKFGQD------GKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDF 1131

Query: 2249 XXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEIL 2428
                   Y++SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G++NVTLGIPRLQEIL
Sbjct: 1132 VNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEIL 1191

Query: 2429 MTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIAT 2608
            MTA+ DI+TP+M CPL   ++KDDAERL+AKL++V VAD+ E MEV  VPF++  ++  +
Sbjct: 1192 MTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCS 1251

Query: 2609 IYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            IYKLKM LY   LYP    ++LEDC E +   FV  +E+AI  HL ++ +IS I
Sbjct: 1252 IYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGI 1305


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1157 bits (2993), Expect = 0.0
 Identities = 594/954 (62%), Positives = 717/954 (75%), Gaps = 31/954 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ  LL KV QANIAL +    +S  + I+ RWMDLQ+S+NVL+D     G+ +++
Sbjct: 429  VMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRD 488

Query: 179  S-NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 355
            + +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE+V
Sbjct: 489  TGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKV 548

Query: 356  TPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGM 535
            TPWNV KLR A++NG +IHPGATHY D+    KL  +K MR  ISRKLP+SR V AQ G 
Sbjct: 549  TPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGR 608

Query: 536  GPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNA 715
              +++FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNA
Sbjct: 609  SSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNA 668

Query: 716  DFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTF 895
            DFDGDEMNVH PQDEISR+EA NI NAN QYIVP+ G PIRGLIQDHIVSAVLLTK DTF
Sbjct: 669  DFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTF 728

Query: 896  LTREEYHQLIYVSCMPPTSYAQ-NRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVIT 1072
            LTRE+Y+QL+Y S +   S +   + G+K S+  SE+E+QPL PAIWKP PLW+GKQVIT
Sbjct: 729  LTREQYNQLLYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVIT 788

Query: 1073 AILNYVTRGCLPFTIEKKGRIQKEYIGND-------------------------SAQLVL 1177
            A+LN++TRG  PFT EK G+I +EY G++                           +  L
Sbjct: 789  AVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKL 848

Query: 1178 HIYNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVD 1357
             I+ NEL+ G+IDKAQF  YGLVH V ELYG + AG LLSV SRLFT FLQMHGFTCGVD
Sbjct: 849  LIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVD 908

Query: 1358 DLLLKRSSDMERDRILEKSEMLSEEVHRRFTRMKDDDKDPMKLQGEIEKVLRGHGESATA 1537
            DLL+  + D+ R   L+KSE + E VH +F        DP+KLQ E+EK++  +GE+A  
Sbjct: 909  DLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAIT 968

Query: 1538 LLDRMMSNAMNSLTSEINQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQ 1717
             LDRMM N +N LTS++N+ L   GL K F  NCLSLMT TGAKG  VN +QISS LGQQ
Sbjct: 969  RLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQ 1028

Query: 1718 ELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA 1897
            +LEGKRVPRMVSGKTLPCFPPWD ++R+GGFISDRFLTGL PQEYYFHCMAGR+GLVDTA
Sbjct: 1029 DLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTA 1088

Query: 1898 IKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLS 2077
            +KTSRSGYLQRCL+KNLECLKV YDYTVRD+DGS+VQF YG+DGVDV ++S+I+EF+ L+
Sbjct: 1089 VKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALA 1148

Query: 2078 DNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFIS---KNQKRSPHQIXXXXX 2248
             N++VV +KF          K N +I KLP  L++    FI    + ++   +       
Sbjct: 1149 VNEEVVCEKFGQD------GKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDF 1202

Query: 2249 XXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEIL 2428
                   Y++SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G++NVTLGIPRLQEIL
Sbjct: 1203 VNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEIL 1262

Query: 2429 MTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIAT 2608
            MTA+ DI+TP+M CPL   ++KDDAERL+AKL++V VAD+ E MEV  VPF++  ++  +
Sbjct: 1263 MTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCS 1322

Query: 2609 IYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            IYKLKM LY   LYP    ++LEDC E +   FV  +E+AI  HL ++ +IS I
Sbjct: 1323 IYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGI 1376


>ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
            gi|548853779|gb|ERN11762.1| hypothetical protein
            AMTR_s00022p00245030 [Amborella trichopoda]
          Length = 1600

 Score = 1139 bits (2947), Expect = 0.0
 Identities = 578/934 (61%), Positives = 721/934 (77%), Gaps = 21/934 (2%)
 Frame = +2

Query: 5    MEHPQNTLLNKVQQANIALKSC--TGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            +EH Q TLL +V +AN++L      GD  ++ I   W DLQ +V++L+DS K  GK  + 
Sbjct: 286  LEHTQTTLLRRVLEANLSLGDAIKAGDVVDSKINDSWRDLQTNVDLLFDSDKASGKKGEL 345

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
             +GIRQLLEKK G+ RQ MMGKRVNFACRSVISPDP+LAVNEIGIPPYFA +LTYPE+VT
Sbjct: 346  ESGIRQLLEKKEGLFRQNMMGKRVNFACRSVISPDPFLAVNEIGIPPYFAKKLTYPEKVT 405

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDR-----------DRMYKLQASKDMRNVISRKL-P 502
            PWN ++LR AV+NG +IHPGAT Y D            D  YK   +++ RN I++KL  
Sbjct: 406  PWNAERLRQAVLNGPEIHPGATLYHDEQGNTNLADNLNDSKYK---NENRRNSIAKKLLS 462

Query: 503  TSRAVTAQ-HGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTI 679
            T  AV+    G G  S+FEGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHV R+LKGEKT+
Sbjct: 463  TPGAVSTDVSGKGFNSNFEGKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVARILKGEKTL 522

Query: 680  RMHYANCSTYNADFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHI 859
            RMHYANCS+YNADFDGDEMNVH PQDEI+R+EA NI NAN+QYIVPTSG PIRGLIQDHI
Sbjct: 523  RMHYANCSSYNADFDGDEMNVHFPQDEIARAEAYNIVNANEQYIVPTSGEPIRGLIQDHI 582

Query: 860  VSAVLLTKLDTFLTREEYHQLIYVSCMPPTS--YAQNRYGEKASLSWSENEIQPLPPAIW 1033
            VSAVLLTK DTFLT+EEYH L+Y +C+   +  +      +K SL  S+ EI+PL PAIW
Sbjct: 583  VSAVLLTKKDTFLTQEEYHHLLYSACVSTVAPDFKHGNLSKKISLVKSDEEIRPLLPAIW 642

Query: 1034 KPIPLWTGKQVITAILNYVTRGCLPFTIEKKGRIQKEYIGNDSAQLVLHIYNNELIHGMI 1213
            KP PLWTGKQVI+ IL++VTRG  PFT+++ GRI   Y G  + +  + ++ NEL+HG+I
Sbjct: 643  KPKPLWTGKQVISTILDHVTRGQPPFTVKRAGRIPAGYFGKKNGEYKVLVHKNELVHGVI 702

Query: 1214 DKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRSSDMER 1393
            DKAQFG +GLVHAVHELYG   AG L SVF+RLFT++LQMHGFTCGVDDLL+++ ++M+R
Sbjct: 703  DKAQFGKFGLVHAVHELYGASAAGRLFSVFTRLFTAYLQMHGFTCGVDDLLVRQCAEMDR 762

Query: 1394 DRILEKSEMLSEEVHRRFTRMKDDDKDPMKLQGEIEKVLRGHGESATALLDRMMSNAMNS 1573
             R L++SE + + VH  F   KD + DP+++Q  IEK++RG GESA A LDRMMS+A+N 
Sbjct: 763  RRKLDESETIGDHVHSWFIGAKDAEMDPIRMQAAIEKLVRGKGESAIARLDRMMSSALNR 822

Query: 1574 LTSEINQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKRVPRMVS 1753
            LTSE+N +LFP GLSKSF +NCLSLMT++GAKGGLVN TQISSLLGQQELEGKRVPRMVS
Sbjct: 823  LTSEVNNSLFPEGLSKSFPSNCLSLMTSSGAKGGLVNFTQISSLLGQQELEGKRVPRMVS 882

Query: 1754 GKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRC 1933
            GKTLPCF PWD ++R+GGFISDRFL GLRPQEYYFHCMAGR+GLVDTAIKT+RSGYLQR 
Sbjct: 883  GKTLPCFLPWDSAARAGGFISDRFLNGLRPQEYYFHCMAGREGLVDTAIKTARSGYLQRR 942

Query: 1934 LVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN- 2110
            L+KNLECL+V+YD+TVRD+DGS+++FIYGEDGVDV+K+S+++EFK L+ N+K +  +   
Sbjct: 943  LMKNLECLRVNYDHTVRDSDGSIIEFIYGEDGVDVVKTSWLTEFKFLAANKKTLSARLGV 1002

Query: 2111 DQMVDATLEKSNIFINKLPSSLKEGAIDFI---SKNQKRSPHQIXXXXXXXXXXXXYLTS 2281
             Q+ DA   + + +I  LP +L+E    FI   SK ++ S H              Y +S
Sbjct: 1003 HQLEDALPSEYDSYIKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSS 1062

Query: 2282 LADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPL 2461
            LA PGE+VGVIAAQS+GEPSTQMTLNTFH AG+G+MNVTLGIPRLQEIL  A+KDIRTP+
Sbjct: 1063 LAQPGEAVGVIAAQSIGEPSTQMTLNTFHFAGQGEMNVTLGIPRLQEIL-GAAKDIRTPV 1121

Query: 2462 MNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYKLKMTLYPS 2641
            M CPL   +T+DDAERL+AKL R+  ADV+E M+V  VPFS+   E  T+YKL+++LYP 
Sbjct: 1122 MTCPLLKQRTRDDAERLAAKLSRIKFADVIESMQVHVVPFSVKNGEACTVYKLRVSLYPP 1181

Query: 2642 KLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHL 2743
            +L+P   ++T  DC++  R+ F+  + + I K+L
Sbjct: 1182 ELFPEHSDITRADCVKAFRSQFLPKLSKVIEKYL 1215


>gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triticum urartu]
          Length = 1915

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 574/963 (59%), Positives = 710/963 (73%), Gaps = 40/963 (4%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKES 181
            +MEHPQN +L+KVQ+AN+AL+    + N+ DIL RW DLQ SVN+ YDS+KGL KS+K+ 
Sbjct: 579  IMEHPQNVMLSKVQEANLALQH--DNPNHMDILTRWRDLQTSVNLFYDSSKGLVKSDKDG 636

Query: 182  NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 361
            +G+RQL++KK+GI+RQK+MGKRVN +CR+VISPDP+LAVNEIGIPP  A +LTYPE+VTP
Sbjct: 637  HGVRQLVDKKTGIVRQKIMGKRVNHSCRTVISPDPFLAVNEIGIPPAAASKLTYPEKVTP 696

Query: 362  WNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMGP 541
            WN K LR A+ NGA+IHPGATHYK  + +YKLQA    R+  ++ L  SR   +Q G  P
Sbjct: 697  WNAKNLRGAIRNGAEIHPGATHYKVNNNLYKLQADHSKRHPTAKTLLASRGSISQPGKDP 756

Query: 542  ESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNADF 721
              +FE KVVYRH+QDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTIRMHYANCSTYNADF
Sbjct: 757  RCEFESKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVVRVLPGEKTIRMHYANCSTYNADF 816

Query: 722  DGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFLT 901
            DGDEMNVH PQDEISR+EA+NI +ANKQYI P SG  +RGLIQDHIV AVLLTK+DTFL+
Sbjct: 817  DGDEMNVHFPQDEISRAEAINIVDANKQYIGPRSGEAVRGLIQDHIVGAVLLTKVDTFLS 876

Query: 902  REEYHQLIYVSCMPPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVITAIL 1081
            REEY QL+Y SC+  T     + G++ S+   ++ ++ LPPA  KP   WTGKQVIT IL
Sbjct: 877  REEYSQLVYGSCVSSTR-GPCQSGKRVSIVNDDDTLELLPPAFVKP-ERWTGKQVITTIL 934

Query: 1082 NYVTRGCLPFTIEKKGRIQKEYIG------------NDSAQLVLHIYNNELIHGMIDKAQ 1225
            N++T+G  PFT+E KG+I  +Y+              D  +LVL+I +NEL+ GMIDK Q
Sbjct: 935  NHLTKGHPPFTVEMKGKISVQYLTAKVRHVAEGEKLRDPEELVLYIRHNELLKGMIDKNQ 994

Query: 1226 FGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRSSDMERDRIL 1405
            FG +G+VH VHELYG D AG LLS+FSRLFT FLQ HGFTCG+DDLLL + S+ ER   L
Sbjct: 995  FGNHGIVHTVHELYGADTAGRLLSIFSRLFTLFLQFHGFTCGIDDLLLSQESNNERTDFL 1054

Query: 1406 EKSEMLSEEVHRRFTRMKDDDKDPMKLQGEIEKVLRGHGESATALLDRMMSNAMNSLTSE 1585
             KSE  SEE H++F   KD D D ++LQ  IEKV+R  GESA   LD+ M + +N LT++
Sbjct: 1055 SKSEEHSEEAHKKFLCKKDVDTDLVELQMNIEKVVRRIGESANVALDKAMLSELNGLTTK 1114

Query: 1586 INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTL 1765
            +N+ +FP GL K F  NCL+LMTATGAKGG VNMTQISSLLG Q+LEG RVPRM+SGK+L
Sbjct: 1115 VNKNMFPYGLQKPFPKNCLTLMTATGAKGGDVNMTQISSLLGSQDLEGARVPRMISGKSL 1174

Query: 1766 PCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDG-------------LVDTAIKT 1906
            PCFPPWD SSR+GG++SDRFLTGLRPQEYYFHCMAGR+G             L+DTA+KT
Sbjct: 1175 PCFPPWDGSSRAGGYVSDRFLTGLRPQEYYFHCMAGRNGHTWLFVFVRSGDKLIDTAVKT 1234

Query: 1907 SRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQ 2086
            SRSGYLQRCL+K+LE L VSYD++VR+ DGS++QF YGEDGVDV KSS++ +FK L+DN+
Sbjct: 1235 SRSGYLQRCLIKSLESLFVSYDHSVRNVDGSIIQFCYGEDGVDVHKSSFLKKFKELADNR 1294

Query: 2087 KVVLQKFN------DQMVDATLEKSNIFINKLPSSLKEGAIDFISKN---------QKRS 2221
            K V  +        D      L   + +I KLP  L + A +F  +N         + R 
Sbjct: 1295 KAVSDRLARYKGELDIYNGDPLSFKSKYITKLPQELTKSATNFHKENKCCCRKLKKKCRC 1354

Query: 2222 PHQIXXXXXXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTL 2401
             + I            Y+ SL DPGE+VGVI AQS+GEPSTQMTLNTFHLAG+GDMNVTL
Sbjct: 1355 RYNIKEEELMKLLKVKYVASLVDPGEAVGVILAQSLGEPSTQMTLNTFHLAGRGDMNVTL 1414

Query: 2402 GIPRLQEILMTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPF 2581
            G+PR+QEILM AS +I TP M CP+H  K + DA RL+ KLR V +ADVVE +EVCTVPF
Sbjct: 1415 GMPRIQEILMKASANIGTPYMKCPVHEGKKRKDAARLAEKLRGVTLADVVEGIEVCTVPF 1474

Query: 2582 SIYGNEIATIYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRI 2761
                  I+++YKL + L+    YP   ELT+++C   +RT FVDAME AI KHL+++H++
Sbjct: 1475 HNSNGHISSLYKLHLKLFSPDCYPPESELTVDECQASLRTVFVDAMEYAIEKHLNLLHKV 1534

Query: 2762 SDI 2770
            S I
Sbjct: 1535 SGI 1537


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 572/955 (59%), Positives = 702/955 (73%), Gaps = 32/955 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE- 178
            VMEHPQ  LL+KV Q+NI+L     +  ++ I+RRW+DLQ+S+N L+DS    G  ++E 
Sbjct: 358  VMEHPQTVLLSKVLQSNISLGDAHINKEHSKIVRRWLDLQQSINTLFDSKTAKGPGQREG 417

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
            + GI QLLEKK G+ RQKMMGKRVN+ACRSVISPDPY+ VNEIGIPP FA++LTYPERVT
Sbjct: 418  APGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYPERVT 477

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMG 538
            PWN+ KLR AV+NG++ HPGATHY D+  + KL  ++  R  ISRKLP+SR    Q G G
Sbjct: 478  PWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTQAGKG 537

Query: 539  PESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS-TYNA 715
             E +FEGK+VYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCS TYNA
Sbjct: 538  SECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSITYNA 597

Query: 716  DFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTF 895
            DFDGDEMNVH PQDE+SR+EA NI NAN Q++ P++G P+RGLIQDHIVSAVLLTK DTF
Sbjct: 598  DFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLLTKKDTF 657

Query: 896  LTREEYHQLIY---VSCMPPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQV 1066
            L+++E++QL+Y   VS + P S+   R G+K   S SE+EIQ LPPAIWKP PLWTGKQV
Sbjct: 658  LSQDEFNQLLYSSGVSTVGPNSF-HGRPGQKVLWSRSEDEIQTLPPAIWKPKPLWTGKQV 716

Query: 1067 ITAILNYVTRGCLPFTIEKKGRI---------------QKEYIGNDSA------QLVLHI 1183
            ITAILN++T    PFT+EK  +I               Q+E    D+       +  + +
Sbjct: 717  ITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEKEPDEEKMLV 776

Query: 1184 YNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDL 1363
            Y NEL+ G+IDK QFG YGLVH VHEL G   AG LLSV SRLFT++LQMHGFTCGVDDL
Sbjct: 777  YKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMHGFTCGVDDL 836

Query: 1364 LLKRSSDMERDRILEKSEMLSEEVHRRFTRMKDD--DKDPMKLQGEIEKVLRGHGESATA 1537
            L+  + D ER + LE  E   E VHR F  +KD+    DP+ +Q  IEK +R  G+SA A
Sbjct: 837  LILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTIRSDGDSALA 896

Query: 1538 LLDRMMSNAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQ 1714
             LDR MSN +N+ TS  +   L   GL K    NC+SLMT +GAKG  VN  QISS LGQ
Sbjct: 897  YLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQ 956

Query: 1715 QELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDT 1894
            QELEGKRVPRMVSGKTLPCF PWD ++RSGG+I+DRFLTGLRPQEYYFHCMAGR+GLVDT
Sbjct: 957  QELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGREGLVDT 1016

Query: 1895 AIKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKML 2074
            A+KTSRSGYLQRCL+KNLECLK+ YD+TVRDADGSVVQF YGEDGVDV ++S+I++FK L
Sbjct: 1017 AVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKEL 1076

Query: 2075 SDNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGA---IDFISKNQKRSPHQIXXXX 2245
            + NQ ++ ++   Q     L   N +I++LP +LKE A   +D  S   + + + +    
Sbjct: 1077 ALNQDMIYKRSGGQ-----LGAFNSYISELPEALKEKADRFLDDFSIMGRIASNLVKRED 1131

Query: 2246 XXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEI 2425
                    +L SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEI
Sbjct: 1132 LYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEI 1191

Query: 2426 LMTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIA 2605
            LMTAS DI+TP+M CPL   +T +DA+ L+ KLR+V VAD+VE MEV  VPF+I    + 
Sbjct: 1192 LMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVC 1251

Query: 2606 TIYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
             IYKLKM LY    YP +  +++ED  E +   F+  +E+AI  H+ ++ RIS I
Sbjct: 1252 RIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGI 1306


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1082 bits (2799), Expect = 0.0
 Identities = 563/945 (59%), Positives = 695/945 (73%), Gaps = 22/945 (2%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ  LL KV Q NI+L       S+ + +L RWMDLQ+SVN+L+D+    GK +  
Sbjct: 349  VMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTASGKRDV- 407

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
            + GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVT
Sbjct: 408  ATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVT 467

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMG 538
            PWNV KLR A++NG + HPGATHY D+  + KL     + ++ SRKLPTSR V    G  
Sbjct: 468  PWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKI 527

Query: 539  PESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNAD 718
             + +FEGKVVYRHL+DGD+VLVNRQPTLHKPS+MAH+VRVLKGEKT+RMHYANCSTYNAD
Sbjct: 528  SDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNAD 587

Query: 719  FDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFL 898
            FDGDE+NVH PQDEISR+EA NI NAN QY+ PTSG PIR LIQDHIVSA LLTK DTFL
Sbjct: 588  FDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFL 647

Query: 899  TREEYHQLIYVS--CMPPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVIT 1072
            + EE++QL+Y S   M        ++G+K  +S SE+E+   PPAIWKP PLWTGKQVI+
Sbjct: 648  SYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPLWTGKQVIS 707

Query: 1073 AILNYVTRGCLPFTIEKKGRIQ-----------KEYIGNDSAQL------VLHIYNNELI 1201
            A+L Y+TRG  PFT EK  +I            K Y  + S +        L IY N+L+
Sbjct: 708  ALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKLLIYKNDLV 767

Query: 1202 HGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRSS 1381
             G++DKAQFG YG++H V ELYG +VAG LLS  SRLFT+FLQMHGFTCGVDDL+L    
Sbjct: 768  RGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGK 827

Query: 1382 DMERDRILEKSEMLSEEVHRRFTRMKDDDK-DPMKLQGEIEKVLRGHGESATALLDRMMS 1558
            D+ER   L+  E++ + VHR F  +K+ D  DP+ LQ  IEK +R +GE+A   LDR M+
Sbjct: 828  DVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGEAALT-LDRKMT 886

Query: 1559 NAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKR 1735
            + +NS TS  I + L   G+ K    NC+SLMT +GAKG +VN  QISS LGQQELEGKR
Sbjct: 887  SNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKR 946

Query: 1736 VPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRS 1915
            VPRMVSGKTLPCFPPWD S R+GGFI DRFLT L PQEYYFHCMAGR+GLVDTA+KTSRS
Sbjct: 947  VPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRS 1006

Query: 1916 GYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVV 2095
            GYLQRCL+KNLECLKV YD+TVRDADGS++QF YGEDGVDV ++S+I+EF  LS N+++V
Sbjct: 1007 GYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELV 1066

Query: 2096 LQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQKRSPHQIXXXXXXXXXXXXYL 2275
               +  Q     L++S+ +INKLP +L EG  +  SK  +R+   +            Y+
Sbjct: 1067 FSNYCRQ-----LDRSSPYINKLPEAL-EGKAEKFSK--QRNLGSMEQADFLRLMEHKYV 1118

Query: 2276 TSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRT 2455
            + LA PGE VGV+A+QSVGEP+TQMTLNTFHLAG+G+MNVTLGIPRLQEILM A++DI+T
Sbjct: 1119 SCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKT 1178

Query: 2456 PLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYKLKMTLY 2635
            P M CPL   K+  DA  L+ KL+++ VAD+++ M+V  VP ++ G ++ +IYKL M LY
Sbjct: 1179 PFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLY 1238

Query: 2636 PSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
             SK YP + ++TL+D  E +R  FV  +E+AI  H+ ++ +IS I
Sbjct: 1239 KSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGI 1283


>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score = 1069 bits (2764), Expect = 0.0
 Identities = 562/951 (59%), Positives = 693/951 (72%), Gaps = 28/951 (2%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSCTGDS--NNTD---ILRRWMDLQRSVNVLYDSTKGLGK 166
            VMEHPQ  LL KV Q NI+L    GD+  N  D   +L RWMDLQ+SVN+L+D+ K  G+
Sbjct: 338  VMEHPQTVLLTKVLQGNISL----GDAHINKLDPSKVLSRWMDLQQSVNLLFDN-KTSGQ 392

Query: 167  SEKESNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYP 346
             E  + GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YP
Sbjct: 393  GEVAA-GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYP 451

Query: 347  ERVTPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQ 526
            ERVTPWNV  LR A++NG   HPGATHY D+    KL  +  + + ISRKLP+SR V   
Sbjct: 452  ERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRKLPSSRGVILD 511

Query: 527  HGMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCST 706
            HG   + +FEGK+VYRHL+DGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCST
Sbjct: 512  HGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCST 571

Query: 707  YNADFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKL 886
            YNADFDGDE+NVH PQDEISR+EA NI NAN QY+ PTSG PIR LIQDHIVSA LLTK 
Sbjct: 572  YNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKK 631

Query: 887  DTFLTREEYHQLIYVSCMPPTSYA--QNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGK 1060
            DTF+T E + QL+Y S +  T       ++G+K  ++ SE E+   PPAIWKP PLWTGK
Sbjct: 632  DTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAIWKPEPLWTGK 691

Query: 1061 QVITAILNYVTRGCLPFTIEKKGRIQ-----------KEYIGNDSAQLV-------LHIY 1186
            QVI+A+L Y+TR   PFT+EK  +I            K +  + S   V       L IY
Sbjct: 692  QVISALLYYITRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNKVEPDDEDKLLIY 751

Query: 1187 NNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLL 1366
             N+L+ G++DKAQFG YG++H V ELYG  VAG LLS  SRLFT+FLQMHGFTCGVDDL+
Sbjct: 752  KNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQMHGFTCGVDDLM 811

Query: 1367 LKRSSDMERDRILEKSEMLSEEVHRRFTR-MKDDDKDPMKLQGEIEKVLRGHGESATALL 1543
            +    D+ER   L   E + + VHR F   M  D  DP+ LQ  IEK +R +GE+A   L
Sbjct: 812  ITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKKIRSNGEAALTYL 871

Query: 1544 DRMMSNAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQE 1720
            DR M++ +NS TS  I + L   G+ K    NC+SLMT +GAKG +VN  QISS LGQQE
Sbjct: 872  DRKMTSNLNSRTSSGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQE 931

Query: 1721 LEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAI 1900
            LEGKRVPRMVSGKTLPCF PWD S R+GGFI DRFLTGL PQEYYFHCMAGR+GLVDTA+
Sbjct: 932  LEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAV 991

Query: 1901 KTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSD 2080
            KTSRSGYLQRCL+KNLECLKV YD+TVRDADGS++QF YGEDGVDV  +S+I++F+ LS 
Sbjct: 992  KTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHHTSFINKFEALST 1051

Query: 2081 NQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQK-RSPHQIXXXXXXXX 2257
            N+++V      Q     L++S+ +INKLP +LKE A +F   + K R+   +        
Sbjct: 1052 NKELVYGNCCRQ-----LDRSSPYINKLPDALKEKAENFFRDSLKQRNLGSLKRAEFLKL 1106

Query: 2258 XXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTA 2437
                Y++ LA PGESVGV+A+QSVGEP+TQMTLNTFHLAG+G+MNVTLGIPRLQEI+M A
Sbjct: 1107 MEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAA 1166

Query: 2438 SKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYK 2617
            ++DI+TP M CPL + K+ ++A  L+ KL+++ VAD+++ M+V  VP S+ G ++ +IYK
Sbjct: 1167 ARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPVSVLGGQVCSIYK 1226

Query: 2618 LKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            L M LY  K YP + ++TLED  + +R +FV  +E+AI  H+ ++ +IS I
Sbjct: 1227 LVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKISGI 1277


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score = 1057 bits (2733), Expect = 0.0
 Identities = 549/880 (62%), Positives = 654/880 (74%), Gaps = 49/880 (5%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ  LL KV QANIAL +    +S  + I+ RWMDLQ+S+NVL+D     G+ +++
Sbjct: 477  VMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRD 536

Query: 179  S-NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 355
            + +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE+V
Sbjct: 537  TGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKV 596

Query: 356  TPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGM 535
            TPWNV KLR A++NG +IHPGATHY D+    KL  +K MR  ISRKLP+SR V AQ G 
Sbjct: 597  TPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGR 656

Query: 536  GPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANC----- 700
              +++FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANC     
Sbjct: 657  SSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCRVESE 716

Query: 701  -------------STYNADFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRG 841
                         STYNADFDGDEMNVH PQDEISR+EA NI NAN QYIVP+ G PIRG
Sbjct: 717  HISMLDLDDCSDSSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRG 776

Query: 842  LIQDHIVSAVLLTKLDTFLTREEYHQLIYVSCMPPTSYAQ-NRYGEKASLSWSENEIQPL 1018
            LIQDHIVSAVLLTK DTFLTRE+Y+QL+Y S +   S +   + G+K S+  SE+E+QPL
Sbjct: 777  LIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPL 836

Query: 1019 PPAIWKPIPLWTGKQVITAILNYVTRGCLPFTIEKKGRIQKEYIGND------------- 1159
             PAIWKP PLW+GKQVITA+LN++TRG  PFT EK G+I +EY G++             
Sbjct: 837  LPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPG 896

Query: 1160 ------------SAQLVLHIYNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVF 1303
                          +  L I+ NEL+ G+IDKAQF  YGLVH V ELYG + AG LLSV 
Sbjct: 897  SDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVL 956

Query: 1304 SRLFTSFLQMHGFTCGVDDLLLKRSSDMERDRILEKSEMLSEEVHRRFTRMKDDDKDPMK 1483
            SRLFT FLQMHGFTCGVDDLL+  + D+ R   L+KSE + E VH +F        DP+K
Sbjct: 957  SRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVK 1016

Query: 1484 LQGEIEKVLRGHGESATALLDRMMSNAMNSLTSEINQTLFPSGLSKSFLTNCLSLMTATG 1663
            LQ E+EK++  +GE+A   LDRMM N +N LTS++N+ L   GL K F  NCLSLMT TG
Sbjct: 1017 LQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTG 1076

Query: 1664 AKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRP 1843
            AKG  VN +QISS LGQQ+LEGKRVPRMVSGKTLPCFPPWD ++R+GGFISDRFLTGL P
Sbjct: 1077 AKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHP 1136

Query: 1844 QEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGE 2023
            QEYYFHCMAGR+GLVDTA+KTSRSGYLQRCL+KNLECLKV YDYTVRD+DGS+VQF YG+
Sbjct: 1137 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGD 1196

Query: 2024 DGVDVLKSSYISEFKMLSDNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFIS 2203
            DGVDV ++S+I+EF+ L+ NQ+VV +KF          K N +I KLP  L++    FI 
Sbjct: 1197 DGVDVHQTSFITEFEALAVNQEVVCEKFGQD------GKFNGYIQKLPKELRKKTKKFIE 1250

Query: 2204 ---KNQKRSPHQIXXXXXXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLA 2374
               + ++   +              Y++SLA PGE VGV+AAQSVGEPSTQMTLNTFHLA
Sbjct: 1251 GFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLA 1310

Query: 2375 GKGDMNVTLGIPRLQEILMTASKDIRTPLMNCPLHAWKTK 2494
            G+G++NVTLGIPRLQEILMTA+ DI+TP+M CPL   ++K
Sbjct: 1311 GRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSK 1350


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score = 1055 bits (2729), Expect = 0.0
 Identities = 548/952 (57%), Positives = 691/952 (72%), Gaps = 23/952 (2%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSCTGDSNNTD-ILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            V EHPQ  LL+KV ++NI+L       ++   ILRRW DLQ SVN+L+D+   L +S+K+
Sbjct: 332  VAEHPQTVLLSKVLESNISLADAHRTKSDAYYILRRWQDLQGSVNLLFDNKTSL-RSQKD 390

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
            ++GI QLL+KK GI RQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT
Sbjct: 391  ASGICQLLDKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 450

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMG 538
            PWN  KL  A++NG D HPGA  Y D+    +LQ  K +R+  SR+L +SR V   HG  
Sbjct: 451  PWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSRRLQSSRGVIMHHGKI 510

Query: 539  PESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNAD 718
             E +FEGKVVYRHL+DGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNAD
Sbjct: 511  HEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNAD 570

Query: 719  FDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFL 898
            FDGDE+NVH PQDEISR+EA NI NAN QY+ PTSG PIR LIQDHIVSA LLTK DTFL
Sbjct: 571  FDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFL 630

Query: 899  TREEYHQLIYVSCMPPTSYA--QNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVIT 1072
            + +E++QL+Y S +  T       + G+K  +S SE+E+   PPAI+KP PLWTGKQVI+
Sbjct: 631  SCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPAIFKPEPLWTGKQVIS 690

Query: 1073 AILNYVTRGCLPFTIEKKGRIQKEYIGNDSAQLVLH----------------IYNNELIH 1204
            A+L Y+T+G  PFT+EK  +I   +    + ++  H                IY N+L+ 
Sbjct: 691  ALLCYITKGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRKKDELEDKLLIYRNDLVR 750

Query: 1205 GMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRSSD 1384
            G++DKAQFG YG+VH V E YG + AG LLS  SRLFT+FLQMHGFTCGVDDLL+K   D
Sbjct: 751  GVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQMHGFTCGVDDLLIKVGKD 810

Query: 1385 MERDRILEKSEMLSEEVHRRFTR-MKDDDKDPMKLQGEIEKVLRGHGESATALLDRMMSN 1561
             ER   LE  E + + VHR F   M+ ++ DP+ +Q  +EK +R +GE+A   LDR M +
Sbjct: 811  SERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKIRSNGEAAITYLDRKMIS 870

Query: 1562 AMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKRV 1738
             +NS TS  + + L   G  K    N +SLMT +GAKG +VN  QISS LGQQELEGKRV
Sbjct: 871  NLNSRTSSGVLKELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRV 930

Query: 1739 PRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSG 1918
            PRMVSGKTLPCFP WD S R+GGFI DRFLT LRPQEYYFHCMAGR+GLVDTA+KTSRSG
Sbjct: 931  PRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSG 990

Query: 1919 YLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVL 2098
            YLQRCL+KNLE LKV YD+TVRD+DGS++QF YGEDGVDV ++S+I++F+ LS N++++ 
Sbjct: 991  YLQRCLMKNLESLKVCYDHTVRDSDGSIIQFHYGEDGVDVHQTSFINKFEALSINKELIY 1050

Query: 2099 QKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFIS--KNQKRSPHQIXXXXXXXXXXXXY 2272
                 Q     L++S+ +INKLP +LK  A +FI    +++R+   +            Y
Sbjct: 1051 SNCCRQ-----LDRSSPYINKLPDALKGKAENFIRDFSSKQRNSSSMKEADFLQVMEHKY 1105

Query: 2273 LTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIR 2452
            ++SLA PGE VGV+A+QSVGEP+TQMTLNTFHLAG+G+MNVTLGIPRL EI++ ASK+I+
Sbjct: 1106 VSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLHEIVVAASKNIK 1165

Query: 2453 TPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYKLKMTL 2632
            TP M CPL   K+ +DA RL+ K++++ VAD++E M+V  VP ++    I +IYKL M L
Sbjct: 1166 TPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVAVKEGRICSIYKLTMKL 1225

Query: 2633 YPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDINVASGK 2788
            +  K YP + ++TLED  E +R  FV  +E+AI  H+ ++ RIS I    GK
Sbjct: 1226 HKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENHISLLARISGIKDFQGK 1277


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
            gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
            190K chain-like protein [Arabidopsis thaliana]
            gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
            [Arabidopsis thaliana]
          Length = 1670

 Score = 1054 bits (2725), Expect = 0.0
 Identities = 546/956 (57%), Positives = 694/956 (72%), Gaps = 32/956 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIAL-KSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ   LNKV ++N  L  +CT   + + ++ RW +LQ SVNVL+DS     +S+++
Sbjct: 363  VMEHPQTVGLNKVIESNNILGNACTNKLDQSKVIFRWRNLQESVNVLFDSKTATVQSQRD 422

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
            S+GI QLLEKK G+ RQKMMGKRVN ACRSVISPDPY+AVN+IGIPP FAL+LTYPERVT
Sbjct: 423  SSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVT 482

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMG 538
            PWNV+KLR A++NG DIHPGATHY D+    KL +++  R  I+RKL +SR  T + G  
Sbjct: 483  PWNVEKLREAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSSRGATTELGKT 542

Query: 539  PESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNAD 718
             + +FEGK V+RH++DGDIVLVNRQPTLHKPS+MAH VRVLKGEKT+R+HYANCSTYNAD
Sbjct: 543  CDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYNAD 602

Query: 719  FDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFL 898
            FDGDEMNVH PQDEISR+EA NI NAN QY  P++G P+R LIQDHIVS+VLLTK DTFL
Sbjct: 603  FDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDTFL 662

Query: 899  TREEYHQLIYVSCMPP--TSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVIT 1072
             ++ ++QL++ S +     S    R G+K  +S S+ E+  + PAI KP+PLWTGKQVIT
Sbjct: 663  DKDHFNQLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQVIT 722

Query: 1073 AILNYVTRGCLPFTIEKKGRIQKEYIGNDSAQL------------------------VLH 1180
            A+LN +T+G  PFT+EK  ++  ++    S ++                         LH
Sbjct: 723  AVLNQITKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKEIDESWKQNLNEDKLH 782

Query: 1181 IYNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDD 1360
            I  NE + G+IDKAQF  YGLVH VHELYG + AG LLSVFSRLFT FLQ HGFTCGVDD
Sbjct: 783  IRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQTHGFTCGVDD 842

Query: 1361 LLLKRSSDMERDRILEKSEMLSEEVHRR-FTRMKDDDKDPMKLQGEIEKVLRGHGESATA 1537
            L++ +  D ER + L++ E + E V R+ F    D   DP  ++  IE++L   GESA A
Sbjct: 843  LIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALA 902

Query: 1538 LLDRMMSNAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQ 1714
             LDR + N +N  +S+ +   L   GL K+   NC+SLMT +GAKG  VN  QISS LGQ
Sbjct: 903  SLDRSIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQ 962

Query: 1715 QELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDT 1894
            Q+LEGKRVPRMVSGKTLPCF PWD S R+GGFISDRFL+GLRPQEYYFHCMAGR+GLVDT
Sbjct: 963  QDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDT 1022

Query: 1895 AIKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKML 2074
            A+KTSRSGYLQRCL+KNLE LKV+YD TVRDADGS++QF YGEDGVDV +SS+I +FK L
Sbjct: 1023 AVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKEL 1082

Query: 2075 SDNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFIS---KNQKRSPHQIXXXX 2245
            + NQ +VLQK ++ M    L  ++ +I+ LP SLK+GA  F+     N++ +   +    
Sbjct: 1083 TINQDMVLQKCSEDM----LSGASSYISDLPISLKKGAEKFVEAMPMNERIASKFVRQEE 1138

Query: 2246 XXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEI 2425
                    +  SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEI
Sbjct: 1139 LLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEI 1198

Query: 2426 LMTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIA 2605
            LMTA+ +I+TP+M CPL   KTK+DA  ++ +LR++ VAD+++ ME+  VP+++Y NE+ 
Sbjct: 1199 LMTAAANIKTPIMTCPLLKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVC 1258

Query: 2606 TIYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDIN 2773
            +I+KLK+ LY  + YP   ++T ED  E +R  F+  +E+AI  H+ M+HRI  I+
Sbjct: 1259 SIHKLKINLYKPEHYPKHTDITEEDWEETMRAVFLRKLEDAIETHMKMLHRIRGIH 1314


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 545/956 (57%), Positives = 696/956 (72%), Gaps = 33/956 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIAL-KSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ   LNKV  +NI L  +CT   + + I+ RWM+LQ SVNVL+DS     +S++E
Sbjct: 365  VMEHPQTVGLNKVLGSNIQLGNACTNKLDQSKIISRWMNLQESVNVLFDSKTATVQSQRE 424

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
             +GI QLLEKK G+ RQKMMGKRVN ACRSVISPDPY+AVN+IGIPP FAL+LTYPERVT
Sbjct: 425  GSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVT 484

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMG 538
            PWNV+KLR A++NG DIHPGATHY D+    KL +++  R  I+RKL +SR  T + G  
Sbjct: 485  PWNVEKLREAIINGPDIHPGATHYSDKLSTVKLPSTEKARRAIARKLLSSRGATTELGKT 544

Query: 539  PESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNAD 718
             + +FEGK V+RH++DGD+VLVNRQPTLHKPS+MAH+VRVL+GEKT+R+HYANCSTYNAD
Sbjct: 545  CDINFEGKTVHRHMRDGDVVLVNRQPTLHKPSLMAHIVRVLRGEKTLRLHYANCSTYNAD 604

Query: 719  FDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFL 898
            FDGDEMNVH PQDEISR+EA NI NAN QY  P++G P+R LIQDHIVS+VLLTK DTFL
Sbjct: 605  FDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSSVLLTKRDTFL 664

Query: 899  TREEYHQLIY---VSCMPPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVI 1069
             ++ ++QL++   V+ M  +S++  R G+K  +S S+ E+  + PAI KP+PLWTGKQVI
Sbjct: 665  DKDHFNQLLFSSGVTDMVLSSFS-GRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQVI 723

Query: 1070 TAILNYVTRGCLPFTIEKKGRIQKEYIGNDSAQL------------------------VL 1177
            TA+LN +T+G  PFT+EK  ++  ++    S ++                         L
Sbjct: 724  TAVLNQITKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKKIDESWKQNLNEDKL 783

Query: 1178 HIYNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVD 1357
             I  NE + G+IDKAQF  YGLVH VHELYG + AG LLSVFSRLFT FLQ+HGFTCGVD
Sbjct: 784  LIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQIHGFTCGVD 843

Query: 1358 DLLLKRSSDMERDRILEKSEMLSEEVHRR-FTRMKDDDKDPMKLQGEIEKVLRGHGESAT 1534
            DL++ +  D ER + L++ E + E V R+ F    D   DP  ++  IE++L   GESA 
Sbjct: 844  DLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESAL 903

Query: 1535 ALLDRMMSNAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLG 1711
            A LDR + N +N  +S+ +   L   GL K+   NC+SLMT +GAKG  VN  QISS LG
Sbjct: 904  ASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGMNCISLMTISGAKGSKVNFQQISSHLG 963

Query: 1712 QQELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVD 1891
            QQ+LEGKRVPRMVSGKTLPCF PWD S R+GGFISDRFL+GLRPQEYYFHCMAGR+GLVD
Sbjct: 964  QQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVD 1023

Query: 1892 TAIKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKM 2071
            TA+KTSRSGYLQRCL+KNLE LK++YD TVRDADGS++QF YGEDGVDV +SS+I +FK 
Sbjct: 1024 TAVKTSRSGYLQRCLMKNLESLKINYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKE 1083

Query: 2072 LSDNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFIS---KNQKRSPHQIXXX 2242
            L+ NQ +VLQ+ ++ M    L  +N +I+ LP SLK GA  F+     N++ +   +   
Sbjct: 1084 LAINQDMVLQRCSEDM----LSGANSYISDLPISLKNGAEKFVEAMPMNERIASKFVRQE 1139

Query: 2243 XXXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQE 2422
                     +  SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQE
Sbjct: 1140 ELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQE 1199

Query: 2423 ILMTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEI 2602
            ILMTA+ DI+TP+M CPL   KTK+DA  ++ KLR++ VAD+++ M++  VP+++Y NE+
Sbjct: 1200 ILMTAAADIKTPIMTCPLLKGKTKEDANDITGKLRKITVADIIKSMDLSVVPYTVYKNEV 1259

Query: 2603 ATIYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
             +I+KLK+ LY  + YP   ++T +D  E +   F+  +E+AI  H+ M+HRI  I
Sbjct: 1260 CSIHKLKINLYKPEHYPKHTDITEKDWEETMTVVFLRKLEDAIEIHMKMLHRIRGI 1315


>gb|EMT12934.1| DNA-directed RNA polymerase I subunit RPA1 [Aegilops tauschii]
          Length = 1717

 Score = 1050 bits (2715), Expect = 0.0
 Identities = 556/1012 (54%), Positives = 700/1012 (69%), Gaps = 89/1012 (8%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKES 181
            +MEHPQN +L+KVQ+AN+AL+  +   N+ D+L RW DLQ SVN+ YDS+KGLGKS K+ 
Sbjct: 279  IMEHPQNVMLSKVQEANLALQHDSAHPNHMDVLTRWRDLQTSVNLFYDSSKGLGKSGKDG 338

Query: 182  NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 361
            +G+RQL++KK+GI+RQK+MGKRVN +CR+VISPDP+LAVNEIGIPP  AL+LTYPE+VTP
Sbjct: 339  HGVRQLVDKKTGIVRQKIMGKRVNHSCRTVISPDPFLAVNEIGIPPAAALKLTYPEKVTP 398

Query: 362  WNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMGP 541
            WN KKL+ A+ NG++IHPGATH K  ++ YKLQ  +  R  I++ L  SR   +Q G  P
Sbjct: 399  WNAKKLQGAISNGSEIHPGATHLKVNNQKYKLQDERTKRRGIAKMLAASRGSISQPGKDP 458

Query: 542  ESDFEGKVVYRHLQDGDIVLVNRQ------------------------------PTLHKP 631
            + +FE KVVYRH+QDGDIVLVNRQ                              PTLHKP
Sbjct: 459  KCEFESKVVYRHIQDGDIVLVNRQSSTYKSIVGLLRYMQNIFFISWFHLNVKTMPTLHKP 518

Query: 632  SMMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHLPQDEISRSEALNIANANKQYI 811
            SMMAHVVRVL GEKTIRMHYANCSTYNADFDGDEMNVH PQDEISR+EA+NI +ANKQYI
Sbjct: 519  SMMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYI 578

Query: 812  VPTSGSPIRGLIQDHIVSAVLLTKLDTFLTREEYHQLIYVSCMPPTSYAQNRYGEKASLS 991
             P SG  +RGLIQDHIV AVLLTK+DTFL+REEY QL+Y SC+  +S    + G++ S+ 
Sbjct: 579  GPRSGEAVRGLIQDHIVGAVLLTKVDTFLSREEYSQLVYGSCVS-SSRGPCQSGKRVSIV 637

Query: 992  WSENEIQPLPPAIWKPIPLWTGKQVITAILNYVTRGCLPFTIEKKGRIQKEYIG------ 1153
              ++ ++ LPPA  KP   WTGKQVIT ILN++T+G  PFT+E KG+I  +Y+       
Sbjct: 638  KDDDTLELLPPAFVKP-ERWTGKQVITTILNHLTKGHPPFTVEMKGKISVQYLTAKVRHV 696

Query: 1154 ------NDSAQLVLHIYNNELIHGMIDKAQFGTYGLVH--------AVHELYGPDVAGTL 1291
                   D  +LVL+I +NEL+ GMIDK QFG +G++         A        + G  
Sbjct: 697  AEGEKLRDPEELVLYIRHNELLKGMIDKNQFGNHGIIQLEDCSRFSAACLHCSCSIGGVS 756

Query: 1292 LSVFSRLFTS-------FLQMHGFTCGVDDLLLKRSSDMERDRILEKSEMLSEEVHRRFT 1450
               FS  + +       FLQ HGFTCG+DDLLL + S+ ER   L +SE  SEE H++F 
Sbjct: 757  DCTFSCNYVTVGLRYIKFLQFHGFTCGIDDLLLSQESNNERTDFLSRSEEHSEEAHKKFL 816

Query: 1451 RMKDDDKDPMKLQGEIEKVLRGHGESATALLDRMMSNAMNSLTSEINQTLFPSGLSKSFL 1630
              KD D D ++LQ  +EKV+R  GESA   LD+ M + +N LT+++N+ +FP GL K F 
Sbjct: 817  CKKDVDTDRVELQMNVEKVVRRIGESANVALDKAMLSELNGLTTKVNKNMFPYGLQKPFP 876

Query: 1631 TNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDVSSRSGGF 1810
             NCL+LMTATGAKGG VNMTQISSLLG Q+LEG RVPRM+SGK+LPCFPPWD SSR+GG+
Sbjct: 877  KNCLTLMTATGAKGGDVNMTQISSLLGSQDLEGARVPRMISGKSLPCFPPWDSSSRAGGY 936

Query: 1811 ISDRFLTGLRPQEYYFHCMAGRDG-------------LVDTAIKTSRSGYLQRCLVKNLE 1951
            +SDRFLTGLRPQEYYFHCMAGR+G             L+DTA+KTSRSGYLQRCL+K+LE
Sbjct: 937  VSDRFLTGLRPQEYYFHCMAGRNGHTWLFVFVRSGDKLIDTAVKTSRSGYLQRCLIKSLE 996

Query: 1952 CLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVV----------LQ 2101
             L VSYD++VR+ DGS++QF YGEDGVDV KSS++ +FK L+DN+K V          L+
Sbjct: 997  SLFVSYDHSVRNVDGSIIQFCYGEDGVDVHKSSFLKKFKELADNRKAVSDRLAGYKGELE 1056

Query: 2102 KFNDQMVDATLEKSNIFINKLPSSLKEGAIDFISKN---------QKRSPHQIXXXXXXX 2254
             +N       L   + +I KLP  L E A  F  +N         + R  + I       
Sbjct: 1057 MYNGD----PLSFKSKYITKLPQGLTESATGFHKENKCCCRKLKKKCRCRYNINEEELMK 1112

Query: 2255 XXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMT 2434
                 Y+ SL DPGE+VGVI AQS+GEPSTQMTLNTFHLAG+GDMNVTLG+PR+QEILM 
Sbjct: 1113 LLKVKYVASLVDPGEAVGVILAQSLGEPSTQMTLNTFHLAGRGDMNVTLGMPRIQEILMK 1172

Query: 2435 ASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIY 2614
            AS +I TP M CP+H  K + DA  L+ KLR V +ADVVE +EVCTVPF      I+++Y
Sbjct: 1173 ASANIGTPYMKCPVHKGKKRKDAACLAEKLRGVTLADVVEGIEVCTVPFHNSNGHISSLY 1232

Query: 2615 KLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            KL + L+    YP   ELT+++C   +RT FVDAME AI KHL+++H++S I
Sbjct: 1233 KLHLKLFSPDCYPPESELTVDECQASLRTVFVDAMEYAIEKHLNLLHKVSGI 1284


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 1050 bits (2715), Expect = 0.0
 Identities = 557/953 (58%), Positives = 696/953 (73%), Gaps = 30/953 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIAL-KSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ  LLNKV Q+NI+L       S ++ I+R WMDLQ+S+N+L+DS    G  + +
Sbjct: 341  VMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKND 400

Query: 179  SN-GIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 355
            ++ GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV
Sbjct: 401  ASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 460

Query: 356  TPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKL--QASKDMRNVISRKLPTSRAVTAQH 529
            T WNV+KLR A++NG + HPGATHY D+    KL  + S+  R  ISRKLP+SR V    
Sbjct: 461  TAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQ 520

Query: 530  GMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS-T 706
            G   + +FEGK+V RHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTIRMHYANCS T
Sbjct: 521  GCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSIT 579

Query: 707  YNADFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKL 886
            YNADFDGDEMNVH PQDEISR+EA NI NAN QY+ PTSG PIR LIQDHI+SAVLLTK 
Sbjct: 580  YNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKK 639

Query: 887  DTFLTREEYHQLIYVSCMPPTSY--AQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGK 1060
            DTFL  +E+ QL+Y S +  +    +  + G+K      + E+ P+ PA+WKP PLWTGK
Sbjct: 640  DTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTGK 699

Query: 1061 QVITAILNYVTRGCLPFTIEKKGRIQKEYI----GND------------SAQL---VLHI 1183
            QV+TA+L+++T+G  PF +EK  +I + ++    GN             +A+L    L I
Sbjct: 700  QVVTALLDHITQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAARLDDDSLLI 759

Query: 1184 YNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDL 1363
            + NEL+ G+IDKAQFG YGLVH V ELYG + AG LLSV SRLFT FLQ HGFTCGVDDL
Sbjct: 760  FKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCGVDDL 819

Query: 1364 LLKRSSDMERDRILEKSEMLSEEVHRRFTRMKDDDK-DPMKLQGEIEKVLRGHGESATAL 1540
            LL    D ER++ L+  E + E+VH  F ++KD +K DPM LQ  IEK +  +GE+A   
Sbjct: 820  LLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALTS 879

Query: 1541 LDRMMSNAMNSLT--SEINQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQ 1714
            LDR M++ +N  T  S++ + L   GL K  + NC+SLMT +GAKGG  N  QISS LGQ
Sbjct: 880  LDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQ 939

Query: 1715 QELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDT 1894
            Q+LEGKRVPRMVSGKTLPCFPPWD +SR+GGFI DRFLTGLRPQEYYFHCMAGR+GLVDT
Sbjct: 940  QQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDT 999

Query: 1895 AIKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKML 2074
            A+KTSRSGYLQRCL+KNLE LK+ YD+TVRDADGSV+QF YGEDGVDV K+++I++F+ L
Sbjct: 1000 AVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEAL 1059

Query: 2075 SDNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKE-GAIDFISKNQKRSPHQIXXXXXX 2251
            + NQ ++ +  + Q     L K N+FIN+LPS+L+E G   + S ++ + P  +      
Sbjct: 1060 AANQDMLYENSHHQ-----LGKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKEDFI 1114

Query: 2252 XXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILM 2431
                  YL+SLA PGE VGV+AAQS+GEPSTQMTLNTFH AG+G+MNVTLGIPRLQEILM
Sbjct: 1115 RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILM 1174

Query: 2432 TASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATI 2611
            TAS+DI+TP+M CPL    + D A+ L+ KL+++ VAD++E M V  VPFS    EI +I
Sbjct: 1175 TASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSI 1234

Query: 2612 YKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            YKL++  YP +       ++ ED    + T F++ +E  I + + ++ +I+ I
Sbjct: 1235 YKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGI 1287


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score = 1049 bits (2712), Expect = 0.0
 Identities = 546/948 (57%), Positives = 692/948 (72%), Gaps = 25/948 (2%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIAL-KSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            V EH Q  LL +V ++NI+L ++    S+ + +LRRWMDLQRSVN+L+D+    G+S+K+
Sbjct: 342  VSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGESQKD 401

Query: 179  S-NGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 355
               GI QLLEKK GI RQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERV
Sbjct: 402  LVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 461

Query: 356  TPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGM 535
            TPWNV +LR A++NG + HPGAT Y D+    KL   +  R++ SR+L +SR V   +G 
Sbjct: 462  TPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRRLQSSRGVIMHNGK 521

Query: 536  GPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNA 715
              +++FEGKVVYRHL+DGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNA
Sbjct: 522  IHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNA 581

Query: 716  DFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTF 895
            DFDGDE+NVH PQDEISR+EA NI NAN QY+ PTSG PIR LIQDHIVSA LLTK DTF
Sbjct: 582  DFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTF 641

Query: 896  LTREEYHQLIYVSCMPPTSYA--QNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVI 1069
            L+ EE++QL+Y S +  T       + G+K  +S S++E+   PPAI+KP PLWTGKQVI
Sbjct: 642  LSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFKPEPLWTGKQVI 701

Query: 1070 TAILNYVTRGCLPFTIEKKGRIQKEYI-----------------GNDSAQLVLHIYNNEL 1198
            +A+L Y+T+G  PFT+EK  +I   +                   ++  +  L IY N+L
Sbjct: 702  SALLYYITKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDEPDEDKLLIYKNDL 761

Query: 1199 IHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRS 1378
            + G++DKAQFG YG+VH V E YG + AG LLS  SRLFT+FLQMHGFTCGVDDLLL   
Sbjct: 762  VRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNFLQMHGFTCGVDDLLLTEG 821

Query: 1379 SDMERDRILEKSEMLSEEVHRRFTR-MKDDDKDPMKLQGEIEKVLRGHGESATALLDRMM 1555
             D ER   LE  E + + VHR F   M+ D+ DP+ +Q  +EK +R +GE+A   LDR M
Sbjct: 822  KDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRSNGEAAITYLDRKM 881

Query: 1556 SNAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGK 1732
             + +NS TS  + + L   G+ K    N +SLMT +GAKG +VN  QISS LGQQELEGK
Sbjct: 882  ISNLNSRTSSGVLKELLSEGILKPSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGK 941

Query: 1733 RVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSR 1912
            RVPRMVSGKTLPCF  WD S R+GGFI DRFLT LRPQEYYFHCMAGR+GLVDTA+KTSR
Sbjct: 942  RVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSR 1001

Query: 1913 SGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKV 2092
            SGYLQRCL+KNLECLKV YD+TVRDADGS++QF YGEDGVDV ++S+I++F+ LS N+++
Sbjct: 1002 SGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFINKFEALSTNKEL 1061

Query: 2093 VLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFI--SKNQKRSPHQIXXXXXXXXXXX 2266
            V      +     L++S+ +INKLP +LK  A  FI  S +++R+   +           
Sbjct: 1062 VYSNCCRE-----LDESSPYINKLPDALKGKAEKFIRDSSSKQRNSGSMTHTNFLQLMEH 1116

Query: 2267 XYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKD 2446
             Y++SLA PGE VGV+A+QSVGEP+TQMTLNTFHLAG+G+MNVTLGIPRLQEIL  AS  
Sbjct: 1117 KYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAH 1176

Query: 2447 IRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYKLKM 2626
            I+TP M CPL   K+ +DA RL+ K++++ VAD++E M+V  VP ++    I +IYKL M
Sbjct: 1177 IKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMM 1236

Query: 2627 TLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
             L+  K YP + ++TL+D  E +R +FV  +E+AI  ++ ++ +IS I
Sbjct: 1237 KLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGI 1284


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1048 bits (2709), Expect = 0.0
 Identities = 546/960 (56%), Positives = 677/960 (70%), Gaps = 37/960 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIALKSC-TGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            +MEHP   LL KV QANIAL +     +  + I+ R MDLQ+SVNVL+DS    G  +K+
Sbjct: 365  IMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSKTASGPGQKD 424

Query: 179  -SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 355
              +GI Q+LEKK GI RQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPER+
Sbjct: 425  VGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERL 484

Query: 356  TPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGM 535
            TPWN  K+R AV+NG + HPGA  + DR    KL ++K MR  ISRKLP+SR    Q G 
Sbjct: 485  TPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSSRGAVTQSGR 544

Query: 536  GPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNA 715
              E +FEGKVVYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNA
Sbjct: 545  NNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNA 604

Query: 716  DFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTF 895
            DFDGDEMNVH PQDEISR+EA NI NAN+QYIVPT G  +RGLIQDHIV AV+LT  +TF
Sbjct: 605  DFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGAVILTMKNTF 664

Query: 896  LTREEYHQLIYVSCM-----PPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGK 1060
            LT  E++QL+Y S +      PTS     +  K S+   E  +Q + PA+WKP PLWTGK
Sbjct: 665  LTLHEFNQLLYGSGVFAAGPAPTS---GNHSNKVSVVDFEGVVQTVLPAVWKPKPLWTGK 721

Query: 1061 QVITAILNYVTRGCLPFTIEKKGRIQKEYIGNDS---------------AQLVLHIYNNE 1195
            QVITA+LN++T+GC P T++ KG+I   Y  ++S               A+    I+ NE
Sbjct: 722  QVITALLNHLTKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAENEFLIWKNE 781

Query: 1196 LIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKR 1375
            L+ G+IDKAQFG +GLVH + ELYG + AG LLS  SRLFT FLQ+HGFTCGVDDL++  
Sbjct: 782  LVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCGVDDLVILP 841

Query: 1376 SSDMERDRILEKSEMLSEEVHRRFTRMKDDDKDPMKLQGEIEKVLRGHGESATALLDRMM 1555
              D+ R   LE  + + EE H  F + K  +  P++LQ EIEK +  + E+ATA LD  M
Sbjct: 842  HYDIRRKEELEGDD-VGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAATAALDMKM 900

Query: 1556 SNAMNSLTSEINQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKR 1735
             N + +  S+ N+ L   GL K F  NC++LMT TGAKG  VN  QISS LGQQELEGKR
Sbjct: 901  KNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLGQQELEGKR 960

Query: 1736 VPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRS 1915
            VPRMVSGKTLPCFPPWD +SR+GG++SDRFL+GLRPQEYYFHCMAGR+GLVDTA+KTSRS
Sbjct: 961  VPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRS 1020

Query: 1916 GYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVV 2095
            GYLQRCL+KNLE LKV YDYTVRDADGS++QF YGEDGVDV ++S++  FK L +NQ+ +
Sbjct: 1021 GYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALKNNQETI 1080

Query: 2096 LQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQKRSPHQI-------------- 2233
             QK           K N +I KLP  L+E    F  K  K+   ++              
Sbjct: 1081 CQKLRHG------RKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKKLGKLVKKEEMVKQLK 1134

Query: 2234 -XXXXXXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIP 2410
                         Y +SLAD GE VGV+A QSVGEPSTQMTLNTFHLAG+G+MNVTLGIP
Sbjct: 1135 EEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIP 1194

Query: 2411 RLQEILMTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIY 2590
            RLQEILMTAS+ I+TP++ CP   W++K+DA+ L AK++++ VAD++E MEV  +P SIY
Sbjct: 1195 RLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIY 1254

Query: 2591 GNEIATIYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
             ++++ +YKL + L           ++ EDC   ++  F+  +E+AI  HL ++ +I+ I
Sbjct: 1255 NHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESHLALLSKINGI 1308


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 546/947 (57%), Positives = 690/947 (72%), Gaps = 24/947 (2%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIAL-KSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            V EH Q  LL +V ++NI+L ++    S+ + +LRRWMDLQRSVN+L+D+    G+ +  
Sbjct: 340  VSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGQKDLV 399

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
            + GI QLLEKK GI RQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT
Sbjct: 400  T-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 458

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMG 538
            PWNV +LR A++NG + HPGAT Y D+    KL   +  R++ SRKL +SR V   +G  
Sbjct: 459  PWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRKLQSSRGVIMHNGKI 518

Query: 539  PESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNAD 718
             +++FEGKVVYRHL+DGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNAD
Sbjct: 519  HDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNAD 578

Query: 719  FDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFL 898
            FDGDE+NVH PQDEISR+EA NI NAN QY+ PTSG PIR LIQDHIVSA LLTK DTFL
Sbjct: 579  FDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFL 638

Query: 899  TREEYHQLIYVSCMPPTSYA--QNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVIT 1072
            + EE++QL+Y S +  T       + G+K  +S S++E+   PPAI+KP PLWTGKQVI+
Sbjct: 639  SCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFKPEPLWTGKQVIS 698

Query: 1073 AILNYVTRGCLPFTIEKKGRIQKEYI-----------------GNDSAQLVLHIYNNELI 1201
            A+L Y+T+G  PFT+EK  +I   +                   ++  +  L IY N+L+
Sbjct: 699  ALLYYITKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDEPDEDKLLIYRNDLV 758

Query: 1202 HGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVDDLLLKRSS 1381
             G++DKAQFG YG+VH V E YG + AG LLS  SRLFT+FLQMHGFTCGVDDLLL    
Sbjct: 759  RGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFLQMHGFTCGVDDLLLTEGK 818

Query: 1382 DMERDRILEKSEMLSEEVHRRFTR-MKDDDKDPMKLQGEIEKVLRGHGESATALLDRMMS 1558
            D ER   LE  E + + VHR F   M+ D+ DP+ +Q  +EK +R +GE+A   LDR M 
Sbjct: 819  DSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRSNGEAAITYLDRKMI 878

Query: 1559 NAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLGQQELEGKR 1735
            + +NS TS  + + L   G+ K    N +SLMT +GAKG +VN  QISS LGQQELEGKR
Sbjct: 879  SNLNSRTSTGVLKVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKR 938

Query: 1736 VPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRS 1915
            VPRMVSGKTLPCF  WD S R+GGFI DRFLT LRPQEYYFHCMAGR+GLVDTA+KTSRS
Sbjct: 939  VPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRS 998

Query: 1916 GYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVV 2095
            GYLQRCL+KNLECLKV YD+TVRDADGS++QF YGEDGVDV ++S+I++F+ LS N+++V
Sbjct: 999  GYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFINKFEALSTNKELV 1058

Query: 2096 LQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFI--SKNQKRSPHQIXXXXXXXXXXXX 2269
                  +     L+KS+ +INKLP +LK  A  FI  S +++R+   +            
Sbjct: 1059 YSNCCRE-----LDKSSPYINKLPDALKGKAEKFILDSSSKQRNSGSMTHTNFLHLMEHK 1113

Query: 2270 YLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDI 2449
            Y++SLA PGE VGV+A+QSVGEP+TQMTLNTFHLAG+G+MNVTLGIPRLQEIL  AS  I
Sbjct: 1114 YVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHI 1173

Query: 2450 RTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEIATIYKLKMT 2629
            +TP M CPL   K+ +DA RL+ K++++ VAD++E M+V  VP ++    I +IYKL M 
Sbjct: 1174 KTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMK 1233

Query: 2630 LYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
            L+  K YP + ++TL+D  E +R +FV  +E+AI  ++ ++ +IS I
Sbjct: 1234 LHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGI 1280


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 1047 bits (2707), Expect = 0.0
 Identities = 554/956 (57%), Positives = 694/956 (72%), Gaps = 33/956 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIAL-KSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ  LLNKV Q+NI+L       S ++ I+R WMDLQ+S+N+L+DS    G  + +
Sbjct: 335  VMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKND 394

Query: 179  SN-GIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 355
            ++ GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV
Sbjct: 395  ASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 454

Query: 356  TPWNVKKLRLAVMNGADIHPGATHYKDRDRMYKL--QASKDMRNVISRKLPTSRAVTAQH 529
            T WNV+KLR A++NG + HPGATHY D+    KL  + S+  R  ISRKLP+SR V    
Sbjct: 455  TAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQ 514

Query: 530  GMGPESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCS-T 706
            G   + +FEGK+V RHLQDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTIRMHYANCS T
Sbjct: 515  GCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSIT 573

Query: 707  YNADFDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKL 886
            YNADFDGDEMNVH PQDEISR+EA NI NAN QY+ PTSG PIR LIQDHI+SAVLLTK 
Sbjct: 574  YNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKK 633

Query: 887  DTFLTREEYHQLIYVSCMPPTSY--AQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGK 1060
            DTFL  +E+ QL+Y S +  +    +  + G+K      + E+ P+ PA+WKP PLWTGK
Sbjct: 634  DTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTGK 693

Query: 1061 QVITAILNYVTRGCLPFTIEKKGRIQKEY-----IGNDSAQLVLH--------------- 1180
            QV+TA+L+++T+G  PF +EK  +I + +     +GN+S++   H               
Sbjct: 694  QVVTALLDHITQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHTKVDKLKAARLDDDS 753

Query: 1181 --IYNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGV 1354
              I+ NEL+ G+IDKAQFG YGLVH V ELYG + AG LLSV SRLFT FLQ HGFTCGV
Sbjct: 754  LLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCGV 813

Query: 1355 DDLLLKRSSDMERDRILEKSEMLSEEVHRRFTRMKDDDK-DPMKLQGEIEKVLRGHGESA 1531
            DDLLL    D ER++ L+  E + E+VH  F ++KD +K DPM LQ  IEK +  +GE+A
Sbjct: 814  DDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAA 873

Query: 1532 TALLDRMMSNAMNSLT--SEINQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSL 1705
               LDR M++ +N  T  S++ + L   GL K  + NC+SLMT +GAKGG  N  QISS 
Sbjct: 874  LTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSH 933

Query: 1706 LGQQELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGL 1885
            LGQQ+LEGKRVPRMVSGKTLPCFPPWD +SR+GGFI DRFLTGLRPQEYYFHCMAGR+GL
Sbjct: 934  LGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGL 993

Query: 1886 VDTAIKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEF 2065
            VDTA+KTSRSGYLQRCL+KNLE LK+ YD+TVRDADGSV+QF YGEDGVDV K+++I++F
Sbjct: 994  VDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKF 1053

Query: 2066 KMLSDNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKE-GAIDFISKNQKRSPHQIXXX 2242
            + L+ NQ ++ +  + Q     L K N+FIN+LPS+L+E G   + S ++ + P  +   
Sbjct: 1054 EALAANQDMLYENSHHQ-----LGKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKE 1108

Query: 2243 XXXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQE 2422
                     YL+SLA PGE VGV+AAQS+GEPSTQMTLNTFH  G+G+MNVTLGI RLQE
Sbjct: 1109 DFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGRGEMNVTLGILRLQE 1168

Query: 2423 ILMTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEI 2602
            ILMTAS+DI+TP+M CPL    + D A+ L+ KL+++ VAD++E M V  VPFS    EI
Sbjct: 1169 ILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREI 1228

Query: 2603 ATIYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
             +IYKL++  YP +       ++ ED    + T F++ +E  I + + ++ +I+ I
Sbjct: 1229 CSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGI 1284


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 1043 bits (2696), Expect = 0.0
 Identities = 543/956 (56%), Positives = 695/956 (72%), Gaps = 33/956 (3%)
 Frame = +2

Query: 2    VMEHPQNTLLNKVQQANIAL-KSCTGDSNNTDILRRWMDLQRSVNVLYDSTKGLGKSEKE 178
            VMEHPQ   LNKV  +NI L  +CT   + + ++ RWM+LQ SVNVL+DS     +S+K+
Sbjct: 351  VMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNLQESVNVLFDSKAASVQSQKD 410

Query: 179  SNGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 358
             +GI QLLEKK G+ RQKMMGKRVN ACRSVISPDPY+AVNEIGIPP FAL+L YPERVT
Sbjct: 411  GSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPPCFALKLIYPERVT 470

Query: 359  PWNVKKLRLAVMNGADIHPGATHYKDRDRMYKLQASKDMRNVISRKLPTSRAVTAQHGMG 538
            PWNV+KLR A++NG D+HPGATHY D+    KL +S   R  I+ KL +SR  T + G  
Sbjct: 471  PWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKERTAIANKLLSSRGATTELGKT 530

Query: 539  PESDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTIRMHYANCSTYNAD 718
             + +FEGKVVYR ++DGD+VLVNRQPTLHKPS+MAH+VRVLKGEKT+R+HYANCSTYNAD
Sbjct: 531  CDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTLRLHYANCSTYNAD 590

Query: 719  FDGDEMNVHLPQDEISRSEALNIANANKQYIVPTSGSPIRGLIQDHIVSAVLLTKLDTFL 898
            FDGDEMNVH PQDEISR+EA NI NAN QY  P++G P+R LIQDHIVS+VLLTK DTFL
Sbjct: 591  FDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSSVLLTKRDTFL 650

Query: 899  TREEYHQLIY---VSCMPPTSYAQNRYGEKASLSWSENEIQPLPPAIWKPIPLWTGKQVI 1069
             ++ ++QL++   V+ M  +S++  + G+K ++S S+ E+  + PAI KP+PLWTGKQVI
Sbjct: 651  DKDLFNQLLFSSGVTDMVLSSFS-GKSGKKVTISASDAELLTVMPAILKPVPLWTGKQVI 709

Query: 1070 TAILNYVTRGCLPFTIEKKGRIQKEYIGNDSAQL------------------------VL 1177
            T +LN +T+G  PFT+EK  ++  ++    S ++                         L
Sbjct: 710  TTVLNLITKGHPPFTVEKATKLPVDFFKCRSREVKPNTGDLTKKKDIDESWKQDLNEDKL 769

Query: 1178 HIYNNELIHGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQMHGFTCGVD 1357
             I  NE + G+IDKAQF  +G+VH VHELYG + AG LLSVFSRLFT+FLQ+HGFTCGVD
Sbjct: 770  LIRKNEFVCGVIDKAQFADFGMVHTVHELYGSNAAGNLLSVFSRLFTAFLQIHGFTCGVD 829

Query: 1358 DLLLKRSSDMERDRILEKSEMLSEEVHRR-FTRMKDDDKDPMKLQGEIEKVLRGHGESAT 1534
            DL++ +  D ER + L++ E + E V R+ F    D   DP  ++  IE++L   GESA 
Sbjct: 830  DLIILKDMDEERTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRSRIERILYEDGESAL 889

Query: 1535 ALLDRMMSNAMNSLTSE-INQTLFPSGLSKSFLTNCLSLMTATGAKGGLVNMTQISSLLG 1711
            A LDR + N +N  +S+ +   L   GL K+   NC+SLMT +GAKG  VN  QISS LG
Sbjct: 890  ASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGKNCISLMTISGAKGSKVNFQQISSHLG 949

Query: 1712 QQELEGKRVPRMVSGKTLPCFPPWDVSSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVD 1891
            QQ+LEGKRVPRMVSGKTLPCF PWD S R+GGFISDRFL+GLRPQEYYFHCMAGR+GLVD
Sbjct: 950  QQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVD 1009

Query: 1892 TAIKTSRSGYLQRCLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKM 2071
            TA+KTSRSGYLQRCL+KNLE LKV+YD TVRDADGS++QF YGEDGVDV +SS+I +FK 
Sbjct: 1010 TAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFKE 1069

Query: 2072 LSDNQKVVLQKFNDQMVDATLEKSNIFINKLPSSLKEGAIDFIS---KNQKRSPHQIXXX 2242
            L+ NQ +VLQ+ ++ M    L  S+ +I+ LP SLK+ A  F+     N++ +   +   
Sbjct: 1070 LTVNQDMVLQRCSEDM----LSGSSSYISDLPISLKKDAEKFVEAMPMNERIASKFVRQE 1125

Query: 2243 XXXXXXXXXYLTSLADPGESVGVIAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQE 2422
                     Y  SLA PGE VGV+AAQSVGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQE
Sbjct: 1126 ELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQE 1185

Query: 2423 ILMTASKDIRTPLMNCPLHAWKTKDDAERLSAKLRRVYVADVVEKMEVCTVPFSIYGNEI 2602
            ILMTA+ DI+TP+M CPL   KTK+DA  ++ KLR++ VAD+++ ME+  VP++I+ N+I
Sbjct: 1186 ILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKITVADIIKDMELSVVPYTIHKNDI 1245

Query: 2603 ATIYKLKMTLYPSKLYPAFYELTLEDCMEVIRTTFVDAMEEAITKHLDMIHRISDI 2770
             +I+KLK+ LY  + YP   ++T ED  E ++  F+  +E+AI  H+ M+HR+  I
Sbjct: 1246 CSIHKLKINLYKPEHYPKNTDITEEDWEETMKVVFLRKLEDAIEIHMKMLHRMRGI 1301