BLASTX nr result

ID: Zingiber25_contig00004203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00004203
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB60668.1| SKP1-like protein 1B [Morus notabilis]                  68   1e-09
ref|NP_568603.1| SKP1-like protein 1B [Arabidopsis thaliana] gi|...    68   1e-09
ref|XP_006661910.1| PREDICTED: SKP1-like protein 1B-like [Oryza ...    68   1e-09
ref|XP_006646753.1| PREDICTED: SKP1-like protein 1B-like [Oryza ...    68   1e-09
gb|ESW28184.1| hypothetical protein PHAVU_003G265900g [Phaseolus...    68   1e-09
ref|XP_006435227.1| hypothetical protein CICLE_v10002751mg [Citr...    68   1e-09
ref|XP_006425391.1| hypothetical protein CICLE_v10026642mg [Citr...    68   1e-09
ref|XP_006383061.1| hypothetical protein POPTR_0005s11180g, part...    68   1e-09
ref|XP_006847969.1| hypothetical protein AMTR_s00029p00153350 [A...    68   1e-09
gb|AGV54260.1| SKP1-like protein [Phaseolus vulgaris] gi|5610312...    68   1e-09
ref|XP_004979241.1| PREDICTED: SKP1-like protein 1B-like [Setari...    68   1e-09
ref|XP_004957494.1| PREDICTED: SKP1-like protein 1B-like [Setari...    68   1e-09
ref|XP_004951176.1| PREDICTED: SKP1-like protein 1B-like [Setari...    68   1e-09
gb|EOX90784.1| S phase kinase-associated protein 1 [Theobroma ca...    68   1e-09
ref|XP_004512165.1| PREDICTED: SKP1-like protein 1A-like [Cicer ...    68   1e-09
ref|XP_004512164.1| PREDICTED: SKP1-like protein 1A-like [Cicer ...    68   1e-09
ref|XP_006281119.1| hypothetical protein CARUB_v10027150mg [Caps...    68   1e-09
gb|EMT23721.1| SKP1-like protein 1A [Aegilops tauschii]                68   1e-09
gb|EMT23720.1| SKP1-like protein 1A [Aegilops tauschii]                68   1e-09
gb|EMT19091.1| SKP1-like protein 4 [Aegilops tauschii]                 68   1e-09

>gb|EXB60668.1| SKP1-like protein 1B [Morus notabilis]
          Length = 157

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 117 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|NP_568603.1| SKP1-like protein 1B [Arabidopsis thaliana]
           gi|71153765|sp|Q9FHW7.1|SKP1B_ARATH RecName:
           Full=SKP1-like protein 1B; AltName: Full=SKP1-like 2;
           AltName: Full=UFO-binding protein 2
           gi|3068809|gb|AAC14445.1| Skp1 homolog [Arabidopsis
           thaliana] gi|9757964|dbj|BAB08452.1| UIP2 [Arabidopsis
           thaliana] gi|28466911|gb|AAO44064.1| At5g42190
           [Arabidopsis thaliana] gi|110743841|dbj|BAE99755.1| UIP2
           [Arabidopsis thaliana] gi|332007394|gb|AED94777.1|
           S-phase kinase-associated protein 1 [Arabidopsis
           thaliana]
          Length = 171

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 131 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171


>ref|XP_006661910.1| PREDICTED: SKP1-like protein 1B-like [Oryza brachyantha]
          Length = 169

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 129 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 169


>ref|XP_006646753.1| PREDICTED: SKP1-like protein 1B-like [Oryza brachyantha]
           gi|573918226|ref|XP_006646755.1| PREDICTED: SKP1-like
           protein 1B-like [Oryza brachyantha]
          Length = 167

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 127 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 167


>gb|ESW28184.1| hypothetical protein PHAVU_003G265900g [Phaseolus vulgaris]
          Length = 155

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 115 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>ref|XP_006435227.1| hypothetical protein CICLE_v10002751mg [Citrus clementina]
           gi|568839457|ref|XP_006473700.1| PREDICTED: SKP1-like
           protein 1B-like [Citrus sinensis]
           gi|557537349|gb|ESR48467.1| hypothetical protein
           CICLE_v10002751mg [Citrus clementina]
          Length = 158

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 118 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158


>ref|XP_006425391.1| hypothetical protein CICLE_v10026642mg [Citrus clementina]
           gi|568825262|ref|XP_006467001.1| PREDICTED: SKP1-like
           protein 1B-like [Citrus sinensis]
           gi|557527381|gb|ESR38631.1| hypothetical protein
           CICLE_v10026642mg [Citrus clementina]
          Length = 168

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 128 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 168


>ref|XP_006383061.1| hypothetical protein POPTR_0005s11180g, partial [Populus
           trichocarpa] gi|550338638|gb|ERP60858.1| hypothetical
           protein POPTR_0005s11180g, partial [Populus trichocarpa]
          Length = 92

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 52  TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 92


>ref|XP_006847969.1| hypothetical protein AMTR_s00029p00153350 [Amborella trichopoda]
           gi|548851274|gb|ERN09550.1| hypothetical protein
           AMTR_s00029p00153350 [Amborella trichopoda]
          Length = 157

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 117 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>gb|AGV54260.1| SKP1-like protein [Phaseolus vulgaris] gi|561031299|gb|ESW29878.1|
           hypothetical protein PHAVU_002G106100g [Phaseolus
           vulgaris]
          Length = 155

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 115 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>ref|XP_004979241.1| PREDICTED: SKP1-like protein 1B-like [Setaria italica]
          Length = 187

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 147 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 187


>ref|XP_004957494.1| PREDICTED: SKP1-like protein 1B-like [Setaria italica]
          Length = 174

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 134 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 174


>ref|XP_004951176.1| PREDICTED: SKP1-like protein 1B-like [Setaria italica]
          Length = 168

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 128 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 168


>gb|EOX90784.1| S phase kinase-associated protein 1 [Theobroma cacao]
          Length = 156

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 116 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>ref|XP_004512165.1| PREDICTED: SKP1-like protein 1A-like [Cicer arietinum]
          Length = 155

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 115 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>ref|XP_004512164.1| PREDICTED: SKP1-like protein 1A-like [Cicer arietinum]
          Length = 155

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 115 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>ref|XP_006281119.1| hypothetical protein CARUB_v10027150mg [Capsella rubella]
           gi|482549823|gb|EOA14017.1| hypothetical protein
           CARUB_v10027150mg [Capsella rubella]
          Length = 204

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 164 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 204


>gb|EMT23721.1| SKP1-like protein 1A [Aegilops tauschii]
          Length = 164

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 124 TVADMIKGKTPEEIRKTFNIKNDFTPEEEAEIRRENQWAFE 164


>gb|EMT23720.1| SKP1-like protein 1A [Aegilops tauschii]
          Length = 128

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 88  TVADMIKGKTPEEIRKTFNIKNDFTPEEEAEIRRENQWAFE 128


>gb|EMT19091.1| SKP1-like protein 4 [Aegilops tauschii]
          Length = 160

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 32/41 (78%)
 Frame = +3

Query: 3   TVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 125
           TVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 120 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 160


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