BLASTX nr result

ID: Zingiber25_contig00004119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00004119
         (578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320018.2| hypothetical protein POPTR_0014s01340g [Popu...    57   3e-06

>ref|XP_002320018.2| hypothetical protein POPTR_0014s01340g [Populus trichocarpa]
           gi|550323101|gb|EEE98333.2| hypothetical protein
           POPTR_0014s01340g [Populus trichocarpa]
          Length = 144

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
 Frame = +1

Query: 43  GSIPFSWENKPGVSSTTEEMTGASPEQSFTVL---PATRKVAGHGLNNNIVPLPPCRSIL 213
           G++PFSWE KPG S  T      S E S   L   P   + +    ++ I+PLPPC    
Sbjct: 12  GNVPFSWEKKPGESKVTSHHDYLSRETSVVKLQPPPCPVESSRISTHDIIIPLPPCTFQA 71

Query: 214 ETSVXXXXXXXXXXXXXENKEWEDPFLAAYLKCTAAEASVWTQGXXXXXXXXXDAVLEAL 393
             +              +    +DPFLAAY +CT  +  V   G          A+ +  
Sbjct: 72  PGAPLRSSSRRGLKKDID----DDPFLAAYKECTKKDKPV---GKDFGSGRRKRAIFDFS 124

Query: 394 SCKATTGTRENAVVKLSE 447
           SCK +   R++ +V++S+
Sbjct: 125 SCKQSCSVRDDNLVRVSQ 142


Top