BLASTX nr result

ID: Zingiber25_contig00004024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00004024
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [S...    64   3e-08
ref|XP_004962921.1| PREDICTED: upstream activation factor subuni...    63   4e-08
gb|EMT15267.1| hypothetical protein F775_31925 [Aegilops tauschii]     63   5e-08
ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea ma...    63   5e-08
ref|XP_006664582.1| PREDICTED: upstream activation factor subuni...    62   6e-08
emb|CBI22492.3| unnamed protein product [Vitis vinifera]               62   6e-08
gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indi...    62   6e-08
ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...    62   6e-08
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]    62   6e-08
ref|NP_001066846.1| Os12g0507500 [Oryza sativa Japonica Group] g...    62   6e-08
ref|XP_006847805.1| hypothetical protein AMTR_s00029p00035130 [A...    62   8e-08
gb|EMS50711.1| hypothetical protein TRIUR3_21019 [Triticum urartu]     61   1e-07
ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825...    60   3e-07
ref|XP_006366602.1| PREDICTED: uncharacterized protein LOC102593...    60   4e-07
ref|XP_006361626.1| PREDICTED: uncharacterized protein LOC102582...    60   4e-07
gb|EOX98412.1| SWIB/MDM2 domain superfamily protein [Theobroma c...    59   5e-07
ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus c...    59   7e-07
gb|EXB76660.1| Upstream activation factor subunit spp27 [Morus n...    58   1e-06
ref|XP_006829241.1| hypothetical protein AMTR_s00001p00272500 [A...    58   1e-06
ref|XP_006346331.1| PREDICTED: protein TRI1-like [Solanum tubero...    58   2e-06

>ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
           gi|241943937|gb|EES17082.1| hypothetical protein
           SORBIDRAFT_08g016260 [Sorghum bicolor]
          Length = 147

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/38 (76%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P+DK+II+CD+KL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 110 PNDKKIIICDDKLKKIFGGRDRVGFLEISGLLNPHFQK 147


>ref|XP_004962921.1| PREDICTED: upstream activation factor subunit spp27-like [Setaria
           italica]
          Length = 149

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/38 (76%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           PD+K+II+CD+KL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 112 PDNKKIIVCDDKLKKIFGGRDRVGFLEISGLLNPHFPK 149


>gb|EMT15267.1| hypothetical protein F775_31925 [Aegilops tauschii]
          Length = 78

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/38 (76%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 41  PENKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 78


>ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea mays]
           gi|195619068|gb|ACG31364.1| hypothetical protein [Zea
           mays] gi|223975083|gb|ACN31729.1| unknown [Zea mays]
           gi|413942035|gb|AFW74684.1| hypothetical protein
           ZEAMMB73_000211 [Zea mays]
          Length = 143

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/38 (76%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 106 PNNKKIIICDEKLKKIFGGRDRVGFLEISGLLNPHFQK 143


>ref|XP_006664582.1| PREDICTED: upstream activation factor subunit UAF30-like [Oryza
           brachyantha]
          Length = 155

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/38 (76%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 118 PNNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 155


>emb|CBI22492.3| unnamed protein product [Vitis vinifera]
          Length = 68

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/38 (73%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIF-GKDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL++IF GKDRVGFLEI+GL+NPHF K
Sbjct: 31  PENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 68


>gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indica Group]
           gi|222617148|gb|EEE53280.1| hypothetical protein
           OsJ_36231 [Oryza sativa Japonica Group]
          Length = 78

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/38 (76%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 41  PNNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 78


>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/38 (73%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIF-GKDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL++IF GKDRVGFLEI+GL+NPHF K
Sbjct: 108 PENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 145


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/38 (73%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIF-GKDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL++IF GKDRVGFLEI+GL+NPHF K
Sbjct: 108 PENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 145


>ref|NP_001066846.1| Os12g0507500 [Oryza sativa Japonica Group]
           gi|113649353|dbj|BAF29865.1| Os12g0507500 [Oryza sativa
           Japonica Group]
          Length = 55

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/38 (76%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 18  PNNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 55


>ref|XP_006847805.1| hypothetical protein AMTR_s00029p00035130 [Amborella trichopoda]
           gi|548851110|gb|ERN09386.1| hypothetical protein
           AMTR_s00029p00035130 [Amborella trichopoda]
          Length = 130

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/38 (73%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG +DRVGFLEISGL+NPHF K
Sbjct: 90  PENKKIIVCDEKLKTIFGGRDRVGFLEISGLINPHFLK 127


>gb|EMS50711.1| hypothetical protein TRIUR3_21019 [Triticum urartu]
          Length = 236

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG ++RVGFLEISGLLNPHF K
Sbjct: 199 PENKKIIVCDEKLKKIFGGRERVGFLEISGLLNPHFQK 236


>ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825851 [Brachypodium
           distachyon]
          Length = 153

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P +K+II+CD+KL+ IFG +DRVGFLEISGLLNPHF K
Sbjct: 116 PANKKIIVCDDKLKKIFGGRDRVGFLEISGLLNPHFQK 153


>ref|XP_006366602.1| PREDICTED: uncharacterized protein LOC102593466 [Solanum tuberosum]
          Length = 137

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P+DK++I+CD+KL+ IFG +DRVGFLEI+GL++PHF K
Sbjct: 100 PEDKKVIICDDKLKKIFGGRDRVGFLEIAGLISPHFLK 137


>ref|XP_006361626.1| PREDICTED: uncharacterized protein LOC102582026 [Solanum tuberosum]
          Length = 138

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P+DK++I+CD+KL+ IFG +DRVGFLEI+GL++PHF K
Sbjct: 101 PEDKKVIICDDKLKKIFGGRDRVGFLEIAGLISPHFLK 138


>gb|EOX98412.1| SWIB/MDM2 domain superfamily protein [Theobroma cacao]
          Length = 136

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/36 (69%), Positives = 34/36 (94%), Gaps = 1/36 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHF 106
           P++KR+I+CDEKL+ IFG KDRVGFLE++GL++PHF
Sbjct: 100 PENKRVIICDEKLKKIFGGKDRVGFLEVAGLISPHF 135


>ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223542031|gb|EEF43575.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 141

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/38 (65%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL+ IFG +DRVGFLE++GL++PHF K
Sbjct: 104 PENKKIIICDEKLKKIFGGRDRVGFLEVAGLISPHFLK 141


>gb|EXB76660.1| Upstream activation factor subunit spp27 [Morus notabilis]
          Length = 137

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 33/36 (91%), Gaps = 1/36 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIF-GKDRVGFLEISGLLNPHF 106
           P++KRII+CDEKL+ IF G+DRVGFLE++GL+ PHF
Sbjct: 101 PENKRIIICDEKLKKIFKGRDRVGFLEVAGLITPHF 136


>ref|XP_006829241.1| hypothetical protein AMTR_s00001p00272500 [Amborella trichopoda]
           gi|548834220|gb|ERM96657.1| hypothetical protein
           AMTR_s00001p00272500 [Amborella trichopoda]
          Length = 129

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/38 (65%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P++K+II+CDEKL++IFG +DRVGFLE++ L+NPHF K
Sbjct: 92  PENKKIIVCDEKLKSIFGGRDRVGFLEVTKLINPHFAK 129


>ref|XP_006346331.1| PREDICTED: protein TRI1-like [Solanum tuberosum]
          Length = 145

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   PDDKRIILCDEKLQNIFG-KDRVGFLEISGLLNPHFTK 112
           P +K++I+CDEKL+ IFG K+RVGFLEI+GL++PHF K
Sbjct: 108 PQNKKVIICDEKLKTIFGGKERVGFLEIAGLISPHFLK 145


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