BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00003932
         (1719 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              425   e-116
ref|XP_003569562.1| PREDICTED: DNA-directed RNA polymerase III s...   410   e-112
ref|XP_004969534.1| PREDICTED: DNA-directed RNA polymerase III s...   404   e-110
tpg|DAA58620.1| TPA: hypothetical protein ZEAMMB73_769576 [Zea m...   404   e-110
ref|XP_004969537.1| PREDICTED: DNA-directed RNA polymerase III s...   401   e-109
tpg|DAA58617.1| TPA: hypothetical protein ZEAMMB73_769576 [Zea m...   401   e-109
ref|NP_001043863.1| Os01g0679000 [Oryza sativa Japonica Group] g...   398   e-108
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   397   e-108
ref|XP_002456140.1| hypothetical protein SORBIDRAFT_03g031160 [S...   396   e-107
emb|CBH32599.1| RNA polymerase III subunit RPC82 domain containi...   385   e-104
gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, ...   376   e-101
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   374   e-101
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   369   2e-99
ref|XP_006652166.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   364   5e-98
gb|EEC71269.1| hypothetical protein OsI_03266 [Oryza sativa Indi...   364   7e-98
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   361   6e-97
dbj|BAJ96220.1| predicted protein [Hordeum vulgare subsp. vulgare]    355   3e-95
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              355   3e-95
gb|EEE55176.1| hypothetical protein OsJ_03008 [Oryza sativa Japo...   355   3e-95
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   351   5e-94

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  425 bits (1092), Expect = e-116
 Identities = 243/529 (45%), Positives = 339/529 (64%), Gaps = 20/529 (3%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M +Q GV LAV +I++HFG+LVAKVC CLL++G+L+L  ++R TE    QVK+C+LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 269  HNCVQAFSVPRG-GAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGI 445
            HNCVQAF++ +  G G A + VTQYMALF NILHRMRF+KFLAIV  +L  +CE +L+G+
Sbjct: 61   HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 446  LGYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIA-PSEEA 622
            L +GRLT +Q++ RA S QSEG     D LR++F KLV  H+VERCP  EPF+A PSEE 
Sbjct: 121  LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 180

Query: 623  APARKR---SSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTVGDK 793
             PARKR   S+K  EE  ++EQ+ + AA+  DA+RFS I N GTD    +D  +VT G+K
Sbjct: 181  TPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTD---VDDSPNVTAGEK 237

Query: 794  RKFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIE 973
            RK ++ ELD+ET A+  E +VLWRANF+               ++R    A +VL A++E
Sbjct: 238  RKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLE 296

Query: 974  SSEQE------CNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYY 1135
            ++  E       NS+  SMD+I E V     G SMTLE VRG L  L C+         Y
Sbjct: 297  ATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESY 356

Query: 1136 TIELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQ 1315
            +++L+ I E  + DEVES+ L +YG++A+RIF LL++    +ETD+ISD T V+KK   +
Sbjct: 357  SVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAK 416

Query: 1316 VLYNLWKDDFLSMQKVSVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVA 1495
            +LY LWKD++L M+K+++ G+ Q  +  LWK+ K + W                ++ +  
Sbjct: 417  ILYQLWKDEYLQMEKLNLHGSRQ-SQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYEL 475

Query: 1496 EQEHEAL-LSEEK--------LKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            EQE E + L  EK         + L+  R++L+ SL+KLDDAIM+F+DF
Sbjct: 476  EQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524


>ref|XP_003569562.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
            [Brachypodium distachyon]
          Length = 505

 Score =  410 bits (1054), Expect = e-112
 Identities = 235/516 (45%), Positives = 331/516 (64%), Gaps = 7/516 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG LVAKVC CLL+ G LSLQEIVR  E S  QVKN LLVLIQ
Sbjct: 1    MVSQHGILLAVGIISDHFGPLVAKVCDCLLRHGELSLQEIVRRLELSPGQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQAFS P+    G  +TVT Y+A+FDN+LHR+RFSKFL++++ D+  + E L++G+L
Sbjct: 61   HNCVQAFSAPK----GRDRTVTLYLAIFDNVLHRLRFSKFLSVIRADI-PESEVLIEGLL 115

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTFDQL+ R  SK  EGS     + +R N +KLVH H+VERCP+PEPFI P   ++
Sbjct: 116  QNGRLTFDQLVGRTISKVPEGSIRPAREEIRMNLNKLVHAHFVERCPKPEPFIDPLVVQQ 175

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDAS-VTEDKQDVTVGDKR 796
               +R+R+ K  E+++SLEQ++V  A L+DAERFSEIP    DAS V    +D     KR
Sbjct: 176  PTSSRRRAPKNFEKVISLEQKIVNTADLSDAERFSEIPYIIEDASDVNGCSRDPVDSAKR 235

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K  + E+DEE  +TI+E EVLWRANF+               + +  +    + E+  E+
Sbjct: 236  KRGAFEVDEELNSTIAENEVLWRANFEQFTFCLKKKFCADRKKLKLKVGTHPIWESFCEA 295

Query: 977  --SEQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQ 1150
              +E++ +S+ + ++ ILE++R K  G SMTL+ V  +LEDL C++  E+    YT +L+
Sbjct: 296  NLTEKDTDSVTSPINGILERLRQKEGGASMTLDQVTRVLEDLQCTTSNENPEA-YTFDLR 354

Query: 1151 CITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNL 1330
             + ESCR +E+ESL+  KYG+ AF IF LL  +G PVETDQI D T++DK++    LY L
Sbjct: 355  KMVESCRNEEIESLVKKKYGQAAFTIFRLLVTQGGPVETDQIIDTTILDKQIVHSTLYKL 414

Query: 1331 WKDDFLSMQKV-SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQEH 1507
            WKDD++  +K+ SV GTG   + ++W+  K +                 Q + ++AE   
Sbjct: 415  WKDDYVDTEKISSVAGTGY-AQFYVWRA-KSTFREQFIDNLYHAALNLRQMVNYIAELLL 472

Query: 1508 EALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            E    + KL++ KN   IL L+L + DD++M+FHDF
Sbjct: 473  EGSKDDTKLRNRKN---ILILALTRHDDSLMLFHDF 505


>ref|XP_004969534.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X1 [Setaria italica] gi|514780183|ref|XP_004969535.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC3-like isoform X2 [Setaria italica]
            gi|514780187|ref|XP_004969536.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X3 [Setaria
            italica]
          Length = 506

 Score =  404 bits (1039), Expect = e-110
 Identities = 232/517 (44%), Positives = 330/517 (63%), Gaps = 8/517 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG LV+KVC CLL+ G+LSLQEIVR    S+ QVKN LLVLIQ
Sbjct: 1    MVSQHGILLAVSIISDHFGPLVSKVCGCLLRHGALSLQEIVRRLGLSSGQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQA+S PR   G   KTVT Y+A+FDN+LHR+RFSKFL++V+ D+  + E LL+G+L
Sbjct: 61   HNCVQAYSTPR---GSGDKTVTVYLAIFDNVLHRLRFSKFLSVVRVDI-PESEVLLEGLL 116

Query: 449  GYGRLTFDQLIVRATSKQSEGS-SCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTFDQL+ RA SK  EGS     + +R NF+KLV+ HYVERCP+PEPF  P   E+
Sbjct: 117  QNGRLTFDQLVERAISKIPEGSPKPTREEIRMNFNKLVYAHYVERCPKPEPFFDPLLDEQ 176

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDAS-VTEDKQDVTVGDKR 796
                RKR+ K  E +LSLEQ+++  A+L+DAERFSEIP +   +S  ++D      G KR
Sbjct: 177  PTSTRKRAPKTVEAVLSLEQKIIRTAALSDAERFSEIPYSMEGSSNASDDHHHAVAGGKR 236

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K E+ E+DEE E+ I+E EVLWRANF+               +++  L    + EA +E+
Sbjct: 237  KHEALEVDEE-ESIIAENEVLWRANFEKFIFCLKKKFCAERKKTKLKLSTLAIWEAFLEA 295

Query: 977  --SEQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQ 1150
              ++ +  ++ + +D ILE+V  K  G SMTL+ +  +L DL+C S T D    Y  +L 
Sbjct: 296  NITDNDNKTVTSPIDGILERVGQKEGGSSMTLDQIISVLNDLECISTTRDPE-QYAFDLN 354

Query: 1151 CITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNL 1330
             + E+CR DEVESL+  K+G+ A+ IF LL ++G  VETD+I+D T++DK++  + LY L
Sbjct: 355  KLVETCRNDEVESLVKKKHGQAAYTIFRLLLKQGCAVETDEITDRTILDKQIVHETLYKL 414

Query: 1331 WKDDFLSMQKV--SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQE 1504
            WKD+++  ++V  +  GTG   + F+W++ K +                 Q +  +AE  
Sbjct: 415  WKDEYIDSERVPSATSGTG-NTQFFVWRV-KNTYREHYTDQLYHAALNLRQLVNCMAELL 472

Query: 1505 HEALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
             E    E K   L+N R +L L+L + D+++M+FHDF
Sbjct: 473  LEGEKDETK---LRNRRNVLILALARHDESLMLFHDF 506


>tpg|DAA58620.1| TPA: hypothetical protein ZEAMMB73_769576 [Zea mays]
          Length = 507

 Score =  404 bits (1037), Expect = e-110
 Identities = 228/517 (44%), Positives = 331/517 (64%), Gaps = 8/517 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG +V+KVC CLL+ G+LSLQ+IVR  E S  QVKN LL+LIQ
Sbjct: 1    MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLQDIVRRLELSPGQVKNSLLILIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQA++ PR   G   +TVT Y+A+FDN+LHR+RFSKFL++V+ D+    E LL+G+L
Sbjct: 61   HNCVQAYTSPR---GAGDRTVTLYLAIFDNVLHRLRFSKFLSVVRVDIPEVSEVLLEGLL 117

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTF+QL+ R   K SE S     + +R NF+KLV+ HYVERCP+PEPF  P   E+
Sbjct: 118  QNGRLTFEQLVERTIFKVSEDSPLPTREEVRMNFNKLVYAHYVERCPKPEPFFDPLAVEQ 177

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTVGDKRK 799
                RKR+ K  E +LSLEQ+VV  A+L+DAERFSEIP     +S  +D      G+KRK
Sbjct: 178  PTSTRKRAPKTVEAVLSLEQKVVCTAALSDAERFSEIPYFMDGSSSAKDGHHAVAGNKRK 237

Query: 800  FESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES- 976
             E+ E+DE+ ++ I+E+EVLWR NF+               +++  L    + EA  E+ 
Sbjct: 238  HETLEVDED-DSIIAESEVLWRINFERFIFCLKKKFCAERKKAKMRLGTLAIWEAFFEAN 296

Query: 977  -SEQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQC 1153
             +  +  ++ + +D ILE+V  K  G+SMTL+ +  +L DL+C+S T +    +T +L  
Sbjct: 297  VTNNDNKTVTSPIDGILERVGQKEGGMSMTLDHITSVLNDLECTS-TANNPEEFTFDLNK 355

Query: 1154 ITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNLW 1333
            + E+CR DE+ESL+  K+G+EA+ IF LL ++GSPVETD+I+D T++DK+V  + LY LW
Sbjct: 356  LVETCRNDEIESLVKKKHGQEAYTIFRLLLKQGSPVETDEITDRTILDKQVVHETLYKLW 415

Query: 1334 KDDFLSMQKV---SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQE 1504
            KD+++  ++V   S  GTG   + F+W++ K                   Q + ++AE  
Sbjct: 416  KDEYIDSERVPSTSATGTGS-AQFFVWRV-KNIYREHFMDNLYHAALNLRQMVNYMAELL 473

Query: 1505 HEALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
             E    E KL++ KN   IL L+L + D+++M+FHDF
Sbjct: 474  LEGSKDEIKLRNRKN---ILILALTRHDESLMLFHDF 507


>ref|XP_004969537.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X4 [Setaria italica]
          Length = 504

 Score =  401 bits (1031), Expect = e-109
 Identities = 231/517 (44%), Positives = 329/517 (63%), Gaps = 8/517 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG LV+KVC CLL+ G+LSLQEIVR    S+ QVKN LLVLIQ
Sbjct: 1    MVSQHGILLAVSIISDHFGPLVSKVCGCLLRHGALSLQEIVRRLGLSSGQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQA+S PRG       TVT Y+A+FDN+LHR+RFSKFL++V+ D+  + E LL+G+L
Sbjct: 61   HNCVQAYSTPRG-----KPTVTVYLAIFDNVLHRLRFSKFLSVVRVDI-PESEVLLEGLL 114

Query: 449  GYGRLTFDQLIVRATSKQSEGS-SCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTFDQL+ RA SK  EGS     + +R NF+KLV+ HYVERCP+PEPF  P   E+
Sbjct: 115  QNGRLTFDQLVERAISKIPEGSPKPTREEIRMNFNKLVYAHYVERCPKPEPFFDPLLDEQ 174

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDAS-VTEDKQDVTVGDKR 796
                RKR+ K  E +LSLEQ+++  A+L+DAERFSEIP +   +S  ++D      G KR
Sbjct: 175  PTSTRKRAPKTVEAVLSLEQKIIRTAALSDAERFSEIPYSMEGSSNASDDHHHAVAGGKR 234

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K E+ E+DEE E+ I+E EVLWRANF+               +++  L    + EA +E+
Sbjct: 235  KHEALEVDEE-ESIIAENEVLWRANFEKFIFCLKKKFCAERKKTKLKLSTLAIWEAFLEA 293

Query: 977  --SEQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQ 1150
              ++ +  ++ + +D ILE+V  K  G SMTL+ +  +L DL+C S T D    Y  +L 
Sbjct: 294  NITDNDNKTVTSPIDGILERVGQKEGGSSMTLDQIISVLNDLECISTTRDPE-QYAFDLN 352

Query: 1151 CITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNL 1330
             + E+CR DEVESL+  K+G+ A+ IF LL ++G  VETD+I+D T++DK++  + LY L
Sbjct: 353  KLVETCRNDEVESLVKKKHGQAAYTIFRLLLKQGCAVETDEITDRTILDKQIVHETLYKL 412

Query: 1331 WKDDFLSMQKV--SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQE 1504
            WKD+++  ++V  +  GTG   + F+W++ K +                 Q +  +AE  
Sbjct: 413  WKDEYIDSERVPSATSGTG-NTQFFVWRV-KNTYREHYTDQLYHAALNLRQLVNCMAELL 470

Query: 1505 HEALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
             E    E K   L+N R +L L+L + D+++M+FHDF
Sbjct: 471  LEGEKDETK---LRNRRNVLILALARHDESLMLFHDF 504


>tpg|DAA58617.1| TPA: hypothetical protein ZEAMMB73_769576 [Zea mays]
            gi|414881487|tpg|DAA58618.1| TPA: hypothetical protein
            ZEAMMB73_769576 [Zea mays] gi|414881488|tpg|DAA58619.1|
            TPA: hypothetical protein ZEAMMB73_769576 [Zea mays]
          Length = 506

 Score =  401 bits (1031), Expect = e-109
 Identities = 228/517 (44%), Positives = 332/517 (64%), Gaps = 8/517 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG +V+KVC CLL+ G+LSLQ+IVR  E S  QVKN LL+LIQ
Sbjct: 1    MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLQDIVRRLELSPGQVKNSLLILIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQA++ PR   G   +TVT Y+A+FDN+LHR+RFSKFL++V+ D+  + E LL+G+L
Sbjct: 61   HNCVQAYTSPR---GAGDRTVTLYLAIFDNVLHRLRFSKFLSVVRVDI-PESEVLLEGLL 116

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTF+QL+ R   K SE S     + +R NF+KLV+ HYVERCP+PEPF  P   E+
Sbjct: 117  QNGRLTFEQLVERTIFKVSEDSPLPTREEVRMNFNKLVYAHYVERCPKPEPFFDPLAVEQ 176

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTVGDKRK 799
                RKR+ K  E +LSLEQ+VV  A+L+DAERFSEIP     +S  +D      G+KRK
Sbjct: 177  PTSTRKRAPKTVEAVLSLEQKVVCTAALSDAERFSEIPYFMDGSSSAKDGHHAVAGNKRK 236

Query: 800  FESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES- 976
             E+ E+DE+ ++ I+E+EVLWR NF+               +++  L    + EA  E+ 
Sbjct: 237  HETLEVDED-DSIIAESEVLWRINFERFIFCLKKKFCAERKKAKMRLGTLAIWEAFFEAN 295

Query: 977  -SEQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQC 1153
             +  +  ++ + +D ILE+V  K  G+SMTL+ +  +L DL+C+S T +    +T +L  
Sbjct: 296  VTNNDNKTVTSPIDGILERVGQKEGGMSMTLDHITSVLNDLECTS-TANNPEEFTFDLNK 354

Query: 1154 ITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNLW 1333
            + E+CR DE+ESL+  K+G+EA+ IF LL ++GSPVETD+I+D T++DK+V  + LY LW
Sbjct: 355  LVETCRNDEIESLVKKKHGQEAYTIFRLLLKQGSPVETDEITDRTILDKQVVHETLYKLW 414

Query: 1334 KDDFLSMQKV---SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQE 1504
            KD+++  ++V   S  GTG   + F+W++ K                   Q + ++AE  
Sbjct: 415  KDEYIDSERVPSTSATGTGS-AQFFVWRV-KNIYREHFMDNLYHAALNLRQMVNYMAELL 472

Query: 1505 HEALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
             E    E KL++ KN   IL L+L + D+++M+FHDF
Sbjct: 473  LEGSKDEIKLRNRKN---ILILALTRHDESLMLFHDF 506


>ref|NP_001043863.1| Os01g0679000 [Oryza sativa Japonica Group]
            gi|56202140|dbj|BAD73473.1| RNA polymerase III
            subunit-like protein [Oryza sativa Japonica Group]
            gi|113533394|dbj|BAF05777.1| Os01g0679000 [Oryza sativa
            Japonica Group] gi|215765022|dbj|BAG86719.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  398 bits (1022), Expect = e-108
 Identities = 231/516 (44%), Positives = 327/516 (63%), Gaps = 7/516 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG LV+KVC CLL+ G+L LQEIVR  E S  QVKN LLVLIQ
Sbjct: 1    MVSQHGILLAVAIISDHFGPLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQAF+ PR   G   KTVT Y+A+FDNI+HR RFSKFL+I++ D+  + E LL+G+L
Sbjct: 61   HNCVQAFNAPR---GNGDKTVTHYLAIFDNIVHRQRFSKFLSIIRADI-PESEALLEGLL 116

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTF QL+ R  SK  EGS     + +R NF+KLV  HYVERCP+PEPF  P   E+
Sbjct: 117  QNGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPEPFFDPLVDEQ 176

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTV-GDKR 796
            +  +RKR+ K  E  LS++++VV  A+L+DAERFSEIP    DAS   D    ++ G KR
Sbjct: 177  STSSRKRAPKTVEIALSIDKKVVNTAALSDAERFSEIPYIMEDASNANDSPRSSISGAKR 236

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K  + E D E ++TI+E EVLWRANF+               + +  +    + EA  E+
Sbjct: 237  KHNALEGDAELDSTIAENEVLWRANFEKFTFCLKKKFCADRKKPKLKVGTHPIWEAFFEA 296

Query: 977  S--EQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQ 1150
            S  E++ NS+ + ++ I+E++  K  G SMTL+ +  +LE+L+CS  +ED +  + ++L 
Sbjct: 297  SLMERDNNSVTSPINGIMERLGQKEGGTSMTLDHITRVLEELNCSPSSEDPD-SFILDLS 355

Query: 1151 CITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNL 1330
             I E+ R +E+ESL+  KYG+EAF IF LL R+  PVETD+I D T++DK++    LY L
Sbjct: 356  RIVEASRNEEIESLVRKKYGQEAFTIFRLLVRERGPVETDKIIDTTILDKQIVHGTLYKL 415

Query: 1331 WKDDFLSMQKV-SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQEH 1507
            WKDD++  +++ S  GTG   + F+W++ K +                 Q + ++AE   
Sbjct: 416  WKDDYIDTERILSGTGTG-NTQYFVWRV-KNTFREQFIDNLCHAALNLRQMVNYIAELLL 473

Query: 1508 EALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            E    + KL++ KN   IL L+L + DD++M+F DF
Sbjct: 474  EGSKDDTKLRNRKN---ILILALTRHDDSLMLFQDF 506


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  397 bits (1020), Expect = e-108
 Identities = 235/528 (44%), Positives = 328/528 (62%), Gaps = 19/528 (3%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M +Q GV LAV +I++HFG+LVAKVC CLL++G+L+L  ++R TE    QVK+C+LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQAF++ +     A + VTQYMALF NILHRMRF+KFLAIV  +L  +CE +L+G+L
Sbjct: 61   HNCVQAFAIQQE----APRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLL 116

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP-SEEAA 625
             +GRLT +Q++ RA S Q E      D LR++F KLV  H+VERCP  EPF+AP SEE  
Sbjct: 117  QHGRLTLEQILDRAKSNQRE--PVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEET 174

Query: 626  PARKR---SSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTVGDKR 796
            PARKR   S+K  EE  ++EQ+ + AA+  DA+RFS I N GTD         V     R
Sbjct: 175  PARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTD---------VDDSPNR 225

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K ++ ELD+ET A+  E +VLWRANF+               ++R    A +VL A++E+
Sbjct: 226  KQDALELDKETGASC-EKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEA 284

Query: 977  SEQEC------NSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYT 1138
            +  E       NS+  SMD+I E V     G SMTLE VRG L  L C+         Y+
Sbjct: 285  TRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESYS 344

Query: 1139 IELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQV 1318
            ++L+ I E  + DEVES+ L +YG++A+RIF LL++    +ETD+ISD T V+KK   ++
Sbjct: 345  VDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAKI 404

Query: 1319 LYNLWKDDFLSMQKVSVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAE 1498
            LY LWKD++L M+K+++ G+ Q  +  LWK+ K + W                ++ +  E
Sbjct: 405  LYQLWKDEYLQMEKLNLHGSRQ-SQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELE 463

Query: 1499 QEHEAL-LSEEK--------LKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            QE E + L  EK         + L+  R++L+ SL+KLDDAIM+F+DF
Sbjct: 464  QEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511


>ref|XP_002456140.1| hypothetical protein SORBIDRAFT_03g031160 [Sorghum bicolor]
            gi|241928115|gb|EES01260.1| hypothetical protein
            SORBIDRAFT_03g031160 [Sorghum bicolor]
          Length = 506

 Score =  396 bits (1018), Expect = e-107
 Identities = 227/516 (43%), Positives = 327/516 (63%), Gaps = 7/516 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG +V+KVC CLL+ G+LSL EI R  E S +QVKN LL+LIQ
Sbjct: 1    MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLLEIGRRLELSPAQVKNSLLILIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQA++ PR   GG  KTVT Y+A+FDN+LHR+RFSKFL++V+ D+  + E LL+G+L
Sbjct: 61   HNCVQAYTSPR---GGGDKTVTLYLAIFDNVLHRLRFSKFLSVVRVDI-PESEVLLEGLL 116

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTF+QL+ R   K  EGS     + +R NF+KLV+ HYVERCP+ EPF  P   E+
Sbjct: 117  QNGRLTFEQLVERTIFKVPEGSPLPTREEIRMNFNKLVYAHYVERCPKSEPFFDPLAVEQ 176

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTVGDKRK 799
                RKR+ K  E +LSLEQ+VV  A+L+DAERFS+IP     +S   D      G+KRK
Sbjct: 177  PTSTRKRAPKIVEAVLSLEQKVVSTAALSDAERFSQIPYFMEGSSSANDGHHAVAGNKRK 236

Query: 800  FESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES- 976
             E+ E+DEE ++ I+E+E LWR NF+               +++  L    + EA  E+ 
Sbjct: 237  HEALEVDEE-DSIIAESEFLWRINFERFIFCLKKKFCAERKKAKMRLGTLAIWEAFFEAN 295

Query: 977  -SEQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQC 1153
             +  +  ++ + +D ILE+V  K  G SMTL+ +  +L DL+C+S T +    +T +L  
Sbjct: 296  VTNNDNKTVTSPIDGILERVGQKEGGTSMTLDQIISVLNDLECTSTTNNPE-EFTFDLNK 354

Query: 1154 ITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNLW 1333
            + E+CR DE+ESL+  K+G+EA+ IF LL ++G PVETD+I+D T++DK+V  + LY LW
Sbjct: 355  LVETCRNDEIESLVKKKHGQEAYTIFRLLLKQGCPVETDEITDRTILDKQVVHETLYKLW 414

Query: 1334 KDDFLSMQKV-SVEGTGQ-RRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQEH 1507
            KD+++  ++V S  GTG    + F+W++ K                   Q I ++AE   
Sbjct: 415  KDEYIDSERVPSTSGTGTGSTQFFVWRV-KNIYREHFMDHLYHAALNLRQMINYMAELLL 473

Query: 1508 EALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            E    E KL++ KN   IL L+L + D+++M+FHDF
Sbjct: 474  EGSKDEIKLRNRKN---ILVLALTRHDESLMLFHDF 506


>emb|CBH32599.1| RNA polymerase III subunit RPC82 domain containing protein, expressed
            [Triticum aestivum]
          Length = 502

 Score =  385 bits (990), Expect = e-104
 Identities = 221/516 (42%), Positives = 322/516 (62%), Gaps = 7/516 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LA  +I+ HFG LVAKVC CLL+ G+L L EIVR  +    QVKN LLVLIQ
Sbjct: 1    MVSQHGILLAAGLISDHFGPLVAKVCDCLLRHGALQLTEIVRRLKLPQGQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQAFS PRG      +T+T Y+A+FDN+LHR+RFSKF++I++ D+  + E L++G+L
Sbjct: 61   HNCVQAFSSPRG-----DRTITLYLAIFDNVLHRLRFSKFISIIRADI-PESEALIEGLL 114

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTFDQL+ R  SK  EG+     + +R NF++LV+  YVERCP+ EP+  P   E+
Sbjct: 115  QNGRLTFDQLVGRTISKVPEGTIRPAREEIRMNFNRLVYARYVERCPKAEPYFNPQEDEQ 174

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTED-KQDVTVGDKR 796
            +  AR+R  K  EE+LSLEQ+VV  A+L+D ERFSEIP +  DAS T D   +   G KR
Sbjct: 175  STGARRRVPKTAEEVLSLEQKVVNTATLSDPERFSEIPYSMEDASKTNDCPHNAVAGAKR 234

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K  + E+DEE  +TI+E EVLWR NF+               + +  +    + E+  E+
Sbjct: 235  KHGAFEVDEELNSTIAENEVLWRVNFEKFIFCLKKKFCADRKKPKLKVGTHPIWESFFEA 294

Query: 977  S--EQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQ 1150
            +  +++ NS+ +S++ ILEK+  K  G +M++  ++ +L DL C++   +    +T +L+
Sbjct: 295  NLPDKDTNSVTSSINGILEKLGQKEGGAAMSIGDIKPVLLDLQCTTSDGE---EFTFDLR 351

Query: 1151 CITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNL 1330
             + E+CR +E+ESL+  KYG+EAF IF LL  +G  VETDQI D T++DK++    LY L
Sbjct: 352  KMVEACRNEEIESLVKKKYGQEAFTIFRLLVTQGCAVETDQIIDTTILDKQIVHSTLYKL 411

Query: 1331 WKDDFLSMQKV-SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQEH 1507
            W D ++  +K+ S  GTG   + F+W+  K +                 Q + ++AE   
Sbjct: 412  WNDGYIDTEKIASAAGTGY-AQFFVWRA-KNTFREQFIDNLYHAALNLRQMVNYIAELLL 469

Query: 1508 EALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            E    E KL++ KN   IL L+L + DD++M+FHDF
Sbjct: 470  EGSKDETKLRNRKN---ILILALTRHDDSLMLFHDF 502


>gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao]
          Length = 523

 Score =  376 bits (965), Expect = e-101
 Identities = 221/526 (42%), Positives = 321/526 (61%), Gaps = 17/526 (3%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M++Q G+  AV +IT HFGDLVAKVC CLL++G L+LQ IVR TE ++SQVKN LLVLIQ
Sbjct: 1    MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGA-GGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGI 445
            HNCVQAF + + G+ G   K  +QY+ALF+NI+HR RF KFL IV   L  QC  L++ +
Sbjct: 61   HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 446  LGYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIA-PSEEA 622
            L +GRLT  Q+  RA S Q+EG    +D +R+ F KL++ H+VERCP  EP +  P+EE 
Sbjct: 121  LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEE 180

Query: 623  APARKR---SSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQD---VTV 784
              ARKR   S+K  E   +LEQ+V+ AA+ ++A RF  +      A   +D+ +   +TV
Sbjct: 181  TSARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSMTV 240

Query: 785  GDKRKFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEA 964
            G KRK ++ E + E EAT  E  VLWRANF+               R+     A +V+ A
Sbjct: 241  GKKRKLDALESETEGEAT-DEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVISA 299

Query: 965  IIESSE------QECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCN 1126
            ++E++       +  NS+  S++SI E+V    +G ++T + VR  L  L C    +  N
Sbjct: 300  MLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKAVN 359

Query: 1127 VYYTIELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKV 1306
              Y+I+ + I E  + DEVES++L +YG++A+R+F LL+     +ETD+I+D   V+KK 
Sbjct: 360  ESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIADTAFVEKKD 419

Query: 1307 AQQVLYNLWKDDFLSMQKVSVEGTGQRRENF-LWKLNKKSSWXXXXXXXXXXXXXXXQKI 1483
              ++LY LWKDD+L M+K+ +  TG R+  F LWK+NK + W                ++
Sbjct: 420  TTKILYKLWKDDYLHMEKLQL--TGARQSQFLLWKVNKNTLWEHVLDEMFHAALNLSLRV 477

Query: 1484 THVAEQEHEA--LLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
             H  EQE E   L  ++++  L+  R++L+ S +KLDDAIM+FHDF
Sbjct: 478  AHELEQEKELLNLPQDKRVNRLRKVRLLLESSQMKLDDAIMLFHDF 523


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            lycopersicum]
          Length = 525

 Score =  374 bits (959), Expect = e-101
 Identities = 214/529 (40%), Positives = 324/529 (61%), Gaps = 20/529 (3%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+S  G+ LAV +I+++FG+L AKVC CLL+RG+ +L ++V +TE S   VKNCLLVLI 
Sbjct: 1    MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIH 60

Query: 269  HNCVQAFSVPR-GGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGI 445
            HNCVQAF++ + GG G   K +TQYMALFDNI+H++RF KF+ IV  +LG +CE +L+ +
Sbjct: 61   HNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWL 120

Query: 446  LGYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP-SEEA 622
            L +GRL+  Q+IV+      +G S + D  + +F++LV+  +VERCP P+P + P +EE 
Sbjct: 121  LQHGRLSLSQIIVKYKQASKQGDS-SADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEE 179

Query: 623  APARKRSSKFRE-EILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQ--DVTVGDK 793
              A+KR +K  + +  ++EQQ + AA+  ++ RF  + N   D+    DK+  DV  G K
Sbjct: 180  TAAKKRGAKSAKIQAQTMEQQALAAAAPMESMRFL-VENIWNDSVEKADKRTTDVKCGMK 238

Query: 794  RKFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIE 973
            RK E  E + +  AT  E EVLWRANF+               + R   DA +VL A +E
Sbjct: 239  RKQEDLESNTKDPAT-GEKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAIVLAATLE 297

Query: 974  SSEQE------CNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYY 1135
             S          NS+  S+++I ++V  +  G+ M LE +R  L+DL C +   + +  Y
Sbjct: 298  LSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEIDETY 357

Query: 1136 TIELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQ 1315
            +++L+ I E  R +EVES++L +YG+EA+R+F LL++    VETD+ISD T V+KK A +
Sbjct: 358  SVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKKDAVK 417

Query: 1316 VLYNLWKDDFLSMQKVSVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVA 1495
            +L+ LWKDD+L M+KV +    ++ E  LWK+NK+S W                + TH  
Sbjct: 418  ILFKLWKDDYLEMKKV-IARAPKQSEFILWKINKQSLWEHILDEMYHAALNLRLRTTHEK 476

Query: 1496 EQEHEAL-LSEEKL--------KHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            EQE E L + ++KL          L+   ++L+ SL+ LDD++M+FHDF
Sbjct: 477  EQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  369 bits (948), Expect = 2e-99
 Identities = 210/529 (39%), Positives = 321/529 (60%), Gaps = 20/529 (3%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+S  G+ LAV +I+++FGDL AKVC CLL+RG+ +L ++V +TE + + VKNCLLVLI 
Sbjct: 1    MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIH 60

Query: 269  HNCVQAFSVPR-GGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGI 445
            HNCVQAF++ + GG G   K +TQYMALFDNI+H++RF KF+ IV  ++G +CE + +G+
Sbjct: 61   HNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGL 120

Query: 446  LGYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
            L +GRLT  ++I R      +G S + D  R +F+ LV+  +VERCP P+P + P  +EE
Sbjct: 121  LQHGRLTLTEIIERYKEASKQGDS-SADAARDSFNSLVNARFVERCPAPDPLLEPPAAEE 179

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQ--DVTVGDK 793
             A  ++ +   + +  ++EQQ + AA+  ++ RF  + +   D+    DK+  DV  G K
Sbjct: 180  TAAKKRGAKSAKIQAQTMEQQALAAAAPMESMRFL-VEDIWNDSVERADKRTTDVKCGMK 238

Query: 794  RKFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIE 973
            RK    E + +  AT  + EVLWRANF+               + R   DA VVL A +E
Sbjct: 239  RKQGDLESNTKDSAT-GKKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAVVLAATLE 297

Query: 974  SSEQE------CNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYY 1135
             S          NS+  S+++I ++V  +  G+ M LE +R  L+DL C +   + +  Y
Sbjct: 298  LSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEIDETY 357

Query: 1136 TIELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQ 1315
            +++L+ I E  R +EVES++L +YG+EA+R+F LL++    VETD+ISD T V+KK A +
Sbjct: 358  SVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKKDAVK 417

Query: 1316 VLYNLWKDDFLSMQKVSVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVA 1495
            +L+ LWKDD+L M+KV +    ++ E  LWK+NK+S W                +ITH  
Sbjct: 418  ILFKLWKDDYLEMKKV-IARAAKQSEFILWKINKQSLWEHILDEMYHAALNLRLRITHEK 476

Query: 1496 EQEHEAL-LSEEKL--------KHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            EQE E L + ++KL          L+   ++L+ SL+ LDD++M+FHDF
Sbjct: 477  EQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>ref|XP_006652166.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC3-like [Oryza brachyantha]
          Length = 510

 Score =  364 bits (935), Expect = 5e-98
 Identities = 221/522 (42%), Positives = 320/522 (61%), Gaps = 13/522 (2%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG L  KVC CLL+ G+L LQEIVR  E S  QVKN LLVLIQ
Sbjct: 1    MVSQHGIFLAVGIISDHFGPL--KVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 58

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQ+F+ PRG      KT T Y+A+F+NILHR RF+KF+++++ D+  + E LLQG+L
Sbjct: 59   HNCVQSFNSPRGSGD---KTTTHYLAIFENILHRQRFAKFVSVIRADMP-ESEALLQGLL 114

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTFDQL+ R  S   EG      + +R NF+KL+  HYVE CP+PEPF  P   E+
Sbjct: 115  QNGRLTFDQLVERTISVVPEGDIKPAREEIRMNFNKLIFEHYVEPCPKPEPFFNPLVDEQ 174

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTV-GDKR 796
                RKR+ K  E  LS++++VV  A+L+DAER+SEIP    DAS   D    ++ G KR
Sbjct: 175  PTSTRKRAPKTVEISLSIDKKVVNTAALSDAERYSEIPCIMEDASNANDSPHSSISGAKR 234

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K  + E+D E  +TI++ EVL+RANF+               + +  +    + EA  E+
Sbjct: 235  KRNAIEVDAELNSTIAQNEVLYRANFEKFMFCLKKKFCAERKKPKLKVGTHPIREAFFEA 294

Query: 977  S--EQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQ 1150
            S  E++ NS+ + ++ ILE++ G+  G SMTL+ +  +LE+L+CS  +ED N +  ++L 
Sbjct: 295  SLIERDNNSVTSPINGILERL-GQKGGTSMTLDHITRVLEELNCSPSSEDPNSFM-LDLS 352

Query: 1151 CITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNL 1330
             I E+ R +E+ESL+  KYG+EAF IF LL R+G PVETD+I D T++DK++    LY L
Sbjct: 353  RIIEASRNEEIESLVKKKYGQEAFIIFRLLVREGCPVETDKIIDTTILDKQIVHGTLYKL 412

Query: 1331 WKDDFLSMQKVSV------EGTGQ-RRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITH 1489
            WKD+++  +   +       GTG    + F+W++ K +                 Q + +
Sbjct: 413  WKDEYIDTEGCYIIRXRILSGTGXGNSQFFVWRV-KNTFREQFIDNLYHAALNLXQMVNY 471

Query: 1490 VAEQEHEALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            +AE   E    + KL+  K    IL L+L++ DD++M+F DF
Sbjct: 472  IAELLLEGSKDDTKLRSRKT---ILILALIRHDDSLMLFQDF 510


>gb|EEC71269.1| hypothetical protein OsI_03266 [Oryza sativa Indica Group]
          Length = 476

 Score =  364 bits (934), Expect = 7e-98
 Identities = 220/516 (42%), Positives = 310/516 (60%), Gaps = 7/516 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG LV+KVC CLL+ G+L LQEIVR  E S  QVKN LLVLIQ
Sbjct: 1    MVSQHGILLAVAIISDHFGSLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQAF+ PRG      KTVT Y+A+FDNI+HR RFSKFL+I++ D+  + E LL+G+L
Sbjct: 61   HNCVQAFNAPRGNGD---KTVTHYLAIFDNIVHRQRFSKFLSIIRADIP-ESEALLEGLL 116

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNV-DVLRKNFSKLVHGHYVERCPRPEPFIAP--SEE 619
              GRLTF QL+ R  SK  EGS     + +R NF+KLV  HYVERCP+PEPF  P   E+
Sbjct: 117  QNGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPEPFFDPLVDEQ 176

Query: 620  AAPARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTV-GDKR 796
            +  +RKR+ K  E  LS++++VV +A+L+DAERFSEIP    DAS   D    ++ G KR
Sbjct: 177  STSSRKRAPKTVEIALSIDKKVVNSAALSDAERFSEIPYIMEDASNANDSPRSSISGAKR 236

Query: 797  KFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIES 976
            K  + E D E ++TI+E EVLWRANF+               + +  +    + EA  E+
Sbjct: 237  KHNALEGDAELDSTIAENEVLWRANFEKFTFCLKKKFCADRKKPKLKVGTHPIWEAFFEA 296

Query: 977  S--EQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQ 1150
            S  E++ NS+ + ++ I+E++ G+ +G                              +L 
Sbjct: 297  SLMERDNNSVTSPINGIMERL-GQKEG------------------------------DLS 325

Query: 1151 CITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNL 1330
             I E+ R +E+ESL+  KYG+EAF IF LL R+  PVETD+I D T++DK++    LY L
Sbjct: 326  RIVEASRNEEIESLVRKKYGQEAFTIFRLLVRERGPVETDKIIDTTILDKQIVHGTLYKL 385

Query: 1331 WKDDFLSMQKV-SVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQEH 1507
            WKDD++  +++ S  GTG   + F+W++ K +                 Q + ++AE   
Sbjct: 386  WKDDYIDTERILSGTGTG-NTQYFVWRV-KNTFREQFIDNLCHAALNLRQMVNYIAELLL 443

Query: 1508 EALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            E    + KL++ KN   IL L+L + DD++M+F DF
Sbjct: 444  EGSKDDTKLRNRKN---ILILALTRHDDSLMLFQDF 476


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  361 bits (926), Expect = 6e-97
 Identities = 224/532 (42%), Positives = 319/532 (59%), Gaps = 23/532 (4%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+++ G   AV VIT HFGDLVAKVC CLL++G L+ Q + R TE S+ QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 269  HNCVQAFSV--PRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQG 442
             NCVQAF+   P G A G  K  TQY+ LFDNILHR+RF+KFL I+  +   QC  L+QG
Sbjct: 61   QNCVQAFTTEQPDGFADGP-KANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQG 119

Query: 443  ILGYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP-SEE 619
            +L +GRLT  Q+  RA S + EG+  ++D LR+   KLV  HYVERCP  EP + P SEE
Sbjct: 120  LLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 620  AAPARKRSSKFREEI---LSLEQQVVIAASLTDAERFSEIPNAGTDASVTE-DKQDVTVG 787
              PARK+ SK  ++I    ++EQQVV AA   +A RFS + N  +D    E +  +VT G
Sbjct: 180  EGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTPG 239

Query: 788  DKRKFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAI 967
            +KRK +  ELDE   A   E  V++RANF+               R+     A  VL A+
Sbjct: 240  EKRKHDVLELDECGVA--DEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAM 297

Query: 968  IE---SSEQEC---NSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNV 1129
            ++   S+E++    NS+  S+ SI E+V     G +MTL+ VR  L  L   S  +  + 
Sbjct: 298  LQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDASSD 357

Query: 1130 YYTIELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVA 1309
             Y+I+ + I E  + +EVES++  +YG++A+RIF LL++ G  +ETD+ISD T V+KK A
Sbjct: 358  SYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDA 417

Query: 1310 QQVLYNLWKDDFLSMQKVSVEGTGQRRENF-LWKLNKKSSWXXXXXXXXXXXXXXXQKIT 1486
             ++LY LWKD +L M+K+ V  TG R+  F LWK+N++  W                +++
Sbjct: 418  PKILYKLWKDGYLLMEKLVV--TGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVS 475

Query: 1487 HVAEQEHEAL---------LSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            +  ++E E L           +++   ++  R++L+ S +KLDDAI++FHDF
Sbjct: 476  YELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 527


>dbj|BAJ96220.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 490

 Score =  355 bits (912), Expect = 3e-95
 Identities = 206/493 (41%), Positives = 304/493 (61%), Gaps = 7/493 (1%)
 Frame = +2

Query: 158  KVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQHNCVQAFSVPRGGAGGATKTVTQ 337
            KVC CLL++G+L LQEIVR       QVKN LLVLIQHNCVQAFS P   +    +T+T 
Sbjct: 10   KVCDCLLRQGALQLQEIVRRLNLPPGQVKNSLLVLIQHNCVQAFSSP---SPRGDRTMTL 66

Query: 338  YMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGILGYGRLTFDQLIVRATSKQSEGSS 517
            Y+ +F+N+LHR+RFSKF+++++ D+  + E L++G+L  GRLTFDQL+ R  SK  EG+ 
Sbjct: 67   YLTIFNNVLHRLRFSKFISVIRADIP-ESEALIEGLLQNGRLTFDQLVGRTISKVPEGTI 125

Query: 518  CNV-DVLRKNFSKLVHGHYVERCPRPEPFIAPSEE--AAPARKRSSKFREEILSLEQQVV 688
                + +R NF++LV   YVERCP+ EP   P E+  +  ARKR+ K  EE+LSLEQ+VV
Sbjct: 126  RPAREEIRMNFNRLVSARYVERCPKAEPHFNPQEDEQSTTARKRAPKTAEEVLSLEQKVV 185

Query: 689  IAASLTDAERFSEIPNAGTDASVTEDK-QDVTVGDKRKFESTELDEETEATISETEVLWR 865
              A+L+D ERFSEIP +  DAS T D+  +V  G KRK  + E+DEE  +TI+E EVLWR
Sbjct: 186  NTATLSDPERFSEIPYSMEDASKTNDRPHNVVAGAKRKHGAFEVDEELNSTIAENEVLWR 245

Query: 866  ANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIESS--EQECNSIKASMDSILEKVRG 1039
             NF+               + +  +    + E+  E++  +++ NS+ +S+  ILEK+  
Sbjct: 246  VNFEKFIFCLKKKFCADRKKPKLKVGTHPIWESFFEANLTDKDTNSVTSSIGGILEKLGQ 305

Query: 1040 KPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQCITESCRKDEVESLILTKYGKEA 1219
            K  G +M++  ++ +LEDL C++ T +    +T +L  + E+CR +E+ESL+  KYG+EA
Sbjct: 306  KEGGAAMSIGQIQPVLEDLQCTTSTGE---EFTFDLHKMIEACRNEEIESLVKKKYGQEA 362

Query: 1220 FRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNLWKDDFLSMQKV-SVEGTGQRREN 1396
            F IF LL  +G  VETDQI D T++DK++    LY LW D ++  +K+ S  GTG   + 
Sbjct: 363  FTIFRLLVTQGCAVETDQIIDTTILDKQIVHSTLYKLWNDGYIDTEKIASAAGTGY-AQF 421

Query: 1397 FLWKLNKKSSWXXXXXXXXXXXXXXXQKITHVAEQEHEALLSEEKLKHLKNSRMILQLSL 1576
            F+W+  K +                 Q + ++AE   E    E KL++ KN   IL L+L
Sbjct: 422  FVWRA-KNTFREQFVDNLYHAALNLRQMVNYIAELLLEGSKDETKLRNRKN---ILILAL 477

Query: 1577 LKLDDAIMIFHDF 1615
             + DD++++F DF
Sbjct: 478  TRHDDSLLLFCDF 490


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  355 bits (911), Expect = 3e-95
 Identities = 216/525 (41%), Positives = 304/525 (57%), Gaps = 16/525 (3%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M  + G+ LAV +I+  FGD  AKVC CLL++G+L+L +IVRT + S  QVK  L VLIQ
Sbjct: 1    MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 269  HNCVQAFSVPR-GGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGI 445
            HNCVQAF++   GG G     VTQYM LFDNILHRMRF K LAIV  +L  +CE L +  
Sbjct: 61   HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120

Query: 446  LGYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPF-IAPSEEA 622
            L +G LT  Q++ R  S Q+EG+    D LR +F+KLV+ HYVERCP P+PF + P EE 
Sbjct: 121  LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEK 180

Query: 623  APARK---RSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQ-----DV 778
             PARK    S+K  EE+   EQ  +  A+ + A+ F  I +  T   +  DK       V
Sbjct: 181  TPARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITD--TCGDINGDKSIGNPPGV 238

Query: 779  TVGDKRKFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVL 958
             +G KRK ++ +LD E+ A  SE +V WRAN++               R+R    A +VL
Sbjct: 239  VIGKKRKQDALKLDTESGAA-SEKDVPWRANYKELVCHLRHKACIENVRARLDSGAAIVL 297

Query: 959  EAIIESSE------QECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTED 1120
             A++E+++      +E  S+  S+ +I E V     G SMTLE +R  L  L C  +   
Sbjct: 298  SAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVG 357

Query: 1121 CNVYYTIELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDK 1300
             +  Y I+L+ I E  + DEVES++L +YG+EA RIF LL++   P+ET +ISD T ++K
Sbjct: 358  ADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETTKISDTTFIEK 417

Query: 1301 KVAQQVLYNLWKDDFLSMQKVSVEGTGQRRENFLWKLNKKSSWXXXXXXXXXXXXXXXQK 1480
            K A ++LY LWKD+ L M+K+ V    ++ +  LWK+ K + W                +
Sbjct: 418  KEAAKILYKLWKDECLHMEKI-VLNESRQSQFMLWKVKKDTFWRHILDEMYHAALNLSIQ 476

Query: 1481 ITHVAEQEHEALLSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            I  +   +H   L E  ++      ++LQ SL+KLDDA+M+FHDF
Sbjct: 477  IIELRRDKHVGALRERDVR----LAILLQASLMKLDDALMLFHDF 517


>gb|EEE55176.1| hypothetical protein OsJ_03008 [Oryza sativa Japonica Group]
          Length = 423

 Score =  355 bits (911), Expect = 3e-95
 Identities = 200/444 (45%), Positives = 283/444 (63%), Gaps = 5/444 (1%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+SQ G+ LAV +I+ HFG LV+KVC CLL+ G+L LQEIVR  E S  QVKN LLVLIQ
Sbjct: 1    MVSQHGILLAVAIISDHFGPLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60

Query: 269  HNCVQAFSVPRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQGIL 448
            HNCVQAF+ PR   G   KTVT Y+A+FDNI+HR RFSKFL+I++ D+  + E LL+G+L
Sbjct: 61   HNCVQAFNAPR---GNGDKTVTHYLAIFDNIVHRQRFSKFLSIIRADI-PESEALLEGLL 116

Query: 449  GYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP--SEEA 622
              G +T  +                 + +R NF+KLV  HYVERCP+PEPF  P   E++
Sbjct: 117  QNGSITPAR-----------------EEIRMNFNKLVFAHYVERCPKPEPFFDPLVDEQS 159

Query: 623  APARKRSSKFREEILSLEQQVVIAASLTDAERFSEIPNAGTDASVTEDKQDVTV-GDKRK 799
              +RKR+ K  E  LS++++VV  A+L+DAERFSEIP    DAS   D    ++ G KRK
Sbjct: 160  TSSRKRAPKTVEIALSIDKKVVNTAALSDAERFSEIPYIMEDASNANDSPRSSISGAKRK 219

Query: 800  FESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAIIESS 979
              + E D E ++TI+E EVLWRANF+               + +  +    + EA  E+S
Sbjct: 220  HNALEGDAELDSTIAENEVLWRANFEKFTFCLKKKFCADRKKPKLKVGTHPIWEAFFEAS 279

Query: 980  --EQECNSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNVYYTIELQC 1153
              E++ NS+ + ++ I+E++  K  G SMTL+ +  +LE+L+CS  +ED +  + ++L  
Sbjct: 280  LMERDNNSVTSPINGIMERLGQKEGGTSMTLDHITRVLEELNCSPSSEDPD-SFILDLSR 338

Query: 1154 ITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVAQQVLYNLW 1333
            I E+ R +E+ESL+  KYG+EAF IF LL R+  PVETD+I D T++DK++    LY LW
Sbjct: 339  IVEASRNEEIESLVRKKYGQEAFTIFRLLVRERGPVETDKIIDTTILDKQIVHGTLYKLW 398

Query: 1334 KDDFLSMQKVSVEGTGQRRENFLW 1405
            KDD++  +++ + GTG    N L+
Sbjct: 399  KDDYIDTERI-LSGTGTGTHNILY 421


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  351 bits (901), Expect = 5e-94
 Identities = 222/532 (41%), Positives = 313/532 (58%), Gaps = 23/532 (4%)
 Frame = +2

Query: 89   MISQDGVNLAVCVITAHFGDLVAKVCSCLLKRGSLSLQEIVRTTEFSNSQVKNCLLVLIQ 268
            M+++ G   AV VIT HFGDLVAKVC CLL++G L+ Q + R TE S+ QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 269  HNCVQAFSV--PRGGAGGATKTVTQYMALFDNILHRMRFSKFLAIVKGDLGVQCETLLQG 442
             NCVQAF+   P G A G  K  TQY+ LFDNILHR+RF+KFL I+  +   QC  L+QG
Sbjct: 61   QNCVQAFTTEQPDGFADGP-KANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQG 119

Query: 443  ILGYGRLTFDQLIVRATSKQSEGSSCNVDVLRKNFSKLVHGHYVERCPRPEPFIAP-SEE 619
            +L +GRLT  Q+  RA S + EG+  ++D LR+   KLV  HYVERCP  EP + P SEE
Sbjct: 120  LLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 620  AAPARKRSSKFREEI---LSLEQQVVIAASLTDAERFSEIPNAGTDASVTE-DKQDVTVG 787
              PARK+ SK  ++I    ++EQQVV AA   +A RFS + N  +D    E +  +VT G
Sbjct: 180  EGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTPG 239

Query: 788  DKRKFESTELDEETEATISETEVLWRANFQXXXXXXXXXXXXXXXRSRKGLDAGVVLEAI 967
            +KRK +  ELDE   A   E  V++RANF+               R+     A  VL A+
Sbjct: 240  EKRKHDVLELDECGVA--DEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAM 297

Query: 968  IE---SSEQEC---NSIKASMDSILEKVRGKPDGISMTLELVRGILEDLDCSSHTEDCNV 1129
            ++   S+E++    NS+  S+ SI E+V     G +MTL+ VR  L  LD          
Sbjct: 298  LQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLD---------- 347

Query: 1130 YYTIELQCITESCRKDEVESLILTKYGKEAFRIFGLLNRKGSPVETDQISDFTLVDKKVA 1309
                  + I E  + +EVES++  +YG++A+RIF LL++ G  +ETD+ISD T V+KK A
Sbjct: 348  -----FEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDA 402

Query: 1310 QQVLYNLWKDDFLSMQKVSVEGTGQRRENF-LWKLNKKSSWXXXXXXXXXXXXXXXQKIT 1486
             ++LY LWKD +L M+K+ V  TG R+  F LWK+N++  W                +++
Sbjct: 403  PKILYKLWKDGYLLMEKLVV--TGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVS 460

Query: 1487 HVAEQEHEAL---------LSEEKLKHLKNSRMILQLSLLKLDDAIMIFHDF 1615
            +  ++E E L           +++   ++  R++L+ S +KLDDAI++FHDF
Sbjct: 461  YELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 512