BLASTX nr result
ID: Zingiber25_contig00003689
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00003689
(1829 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX95552.1| Homeodomain-like superfamily protein isoform 1 [T... 153 8e-51
gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [T... 153 6e-49
ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cice... 146 9e-46
emb|CAD12767.2| LHY protein [Phaseolus vulgaris] 150 3e-45
dbj|BAD97866.1| LHY homologue1 [Lemna paucicostata] 159 4e-36
ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Seta... 157 2e-35
dbj|BAD97870.1| LHY homologue1 [Lemna gibba] 157 2e-35
ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26... 155 4e-35
dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group] 155 6e-35
gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare sub... 155 6e-35
dbj|BAJ92173.1| predicted protein [Hordeum vulgare subsp. vulgar... 155 6e-35
gb|ADW09013.1| LHY [Triticum aestivum] 155 6e-35
gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indi... 155 6e-35
ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group] g... 155 6e-35
ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Ory... 155 7e-35
ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Ory... 155 7e-35
gb|AFW61192.1| putative MYB DNA-binding domain superfamily prote... 154 9e-35
ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium di... 154 9e-35
ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27... 154 9e-35
gb|AAR20887.1| circadian oscillator component [Oryza sativa Japo... 154 2e-34
>gb|EOX95552.1| Homeodomain-like superfamily protein isoform 1 [Theobroma cacao]
gi|508703666|gb|EOX95562.1| Homeodomain-like superfamily
protein isoform 1 [Theobroma cacao]
gi|508703667|gb|EOX95563.1| Homeodomain-like superfamily
protein isoform 1 [Theobroma cacao]
Length = 739
Score = 153 bits (386), Expect(2) = 8e-51
Identities = 88/153 (57%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
M+ SS EEL VIK RKPYTITKQRE+WT+EEH RFLEALKLYGRAWQRIEEHIGTKTAV
Sbjct: 1 MDTYSSGEEL-VIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDIXXXXXXXXXXXXXXXXXXIGTLALEEAM 754
QIRSHAQKFF+KLEKEA+ KG+ GQ DI+I T A A
Sbjct: 60 QIRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTAQVGAK 119
Query: 755 SRKPEKSMPLLGENQVIDIKSDSSGER-NYQEK 850
K E + L QV+D++ + ER N EK
Sbjct: 120 DGKSETPLSSLRCKQVLDLEKEPLPERPNGDEK 152
Score = 76.6 bits (187), Expect(2) = 8e-51
Identities = 93/362 (25%), Positives = 142/362 (39%), Gaps = 30/362 (8%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXA-------FIEFLPTTKEIM 990
EK + ++D +CSEVV +A A F EF+P+ KE +
Sbjct: 151 EKPINLKDNQDDSCSEVVTLLHEANCSSVSSVNKNSIPTSAALRNSCTFREFVPSLKETI 210
Query: 991 AEKIATNKSSAPLENSKSFIEEETEGRLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKG 1170
+ T+K+S L+NS + E+ +G+ K ++G D ++
Sbjct: 211 QDN-GTSKASN-LDNSCTSHEKAAQGQ-----------------KKDDVDGGLRADETQA 251
Query: 1171 DQTNANKSTMHVSNCRQSMQIDASDSQNPF--SLTDQVGDE-------ANGSLASTIPVQ 1323
Q +HV + PF S+ +GD AN + ++T Q
Sbjct: 252 TQNYPRHVAVHVLDGSLGTGAQNPSLDMPFQDSVFHPMGDVHGQTNLFANPAASATTEHQ 311
Query: 1324 DASTISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXX 1500
+ + S T P TH+ + + YRSF + SSTF SLI STLLQNP
Sbjct: 312 NNAPRSTHQAFPTFHPPFTHVCPNPEDYRSFLHVSSTFSSLIASTLLQNPAAHAAASFAA 371
Query: 1501 SFCPSTVLPSTQYIPEAH-----NAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPP- 1662
+F P + S+ P + MNP PS+ GLLP P
Sbjct: 372 TFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAATAWWAAHGLLPLCAPL 431
Query: 1663 -------LAGFAFSPPNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAIKPQHASS 1821
LA A PP N + D + + QQ++ ++ SEA++ QH++S
Sbjct: 432 HTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQDQQLDPEY-SEALQAQHSAS 490
Query: 1822 KS 1827
KS
Sbjct: 491 KS 492
>gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [Theobroma cacao]
gi|508703664|gb|EOX95560.1| Homeodomain-like superfamily
protein isoform 5 [Theobroma cacao]
gi|508703665|gb|EOX95561.1| Homeodomain-like superfamily
protein isoform 5 [Theobroma cacao]
Length = 707
Score = 153 bits (386), Expect(2) = 6e-49
Identities = 88/153 (57%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
M+ SS EEL VIK RKPYTITKQRE+WT+EEH RFLEALKLYGRAWQRIEEHIGTKTAV
Sbjct: 1 MDTYSSGEEL-VIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDIXXXXXXXXXXXXXXXXXXIGTLALEEAM 754
QIRSHAQKFF+KLEKEA+ KG+ GQ DI+I T A A
Sbjct: 60 QIRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTAQVGAK 119
Query: 755 SRKPEKSMPLLGENQVIDIKSDSSGER-NYQEK 850
K E + L QV+D++ + ER N EK
Sbjct: 120 DGKSETPLSSLRCKQVLDLEKEPLPERPNGDEK 152
Score = 70.5 bits (171), Expect(2) = 6e-49
Identities = 89/354 (25%), Positives = 133/354 (37%), Gaps = 22/354 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXA-------FIEFLPTTKEIM 990
EK + ++D +CSEVV +A A F EF+P+ KE +
Sbjct: 151 EKPINLKDNQDDSCSEVVTLLHEANCSSVSSVNKNSIPTSAALRNSCTFREFVPSLKETI 210
Query: 991 AEKIATNKSSAPLENSKSFIEEETEGRLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKG 1170
+ T+K+S L+NS + E+ +G+ K ++G D ++
Sbjct: 211 QDN-GTSKASN-LDNSCTSHEKAAQGQ-----------------KKDDVDGGLRADETQA 251
Query: 1171 DQTNANKSTMHVSNCRQSMQIDASDSQNPFSLTDQVGDEANGSLASTIPVQDASTISYFH 1350
Q +HV D + G+ AS + H
Sbjct: 252 TQNYPRHVAVHVL------------------------DGSLGTAASATTEHQNNAPRSTH 287
Query: 1351 QPH-TASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSFCPSTVL 1524
Q T P TH+ + + YRSF + SSTF SLI STLLQNP +F P +
Sbjct: 288 QAFPTFHPPFTHVCPNPEDYRSFLHVSSTFSSLIASTLLQNPAAHAAASFAATFWPYANV 347
Query: 1525 PSTQYIPEAH-----NAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPP--------L 1665
S+ P + MNP PS+ GLLP P L
Sbjct: 348 DSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHTGFTCAL 407
Query: 1666 AGFAFSPPNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAIKPQHASSKS 1827
A A PP N + D + + QQ++ ++ SEA++ QH++SKS
Sbjct: 408 ASAAAVPPMDNEQAPATKMERKDNNDQDLSMQDQQLDPEY-SEALQAQHSASKS 460
>ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cicer arietinum]
gi|502114154|ref|XP_004494879.1| PREDICTED: protein
LHY-like isoform X2 [Cicer arietinum]
gi|502114158|ref|XP_004494880.1| PREDICTED: protein
LHY-like isoform X3 [Cicer arietinum]
Length = 756
Score = 146 bits (368), Expect(2) = 9e-46
Identities = 82/153 (53%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME SS EE+ V+K RKPYTITKQRE+WT++EH RFLEALKLYGRAWQRIEEHIGTKTAV
Sbjct: 2 MEAYSSGEEV-VVKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAV 60
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDIXXXXXXXXXXXXXXXXXXIGTLALEE-A 751
QIRSHAQKFF+KLEKEA+ KG A GQ +IDI +G L A
Sbjct: 61 QIRSHAQKFFSKLEKEALVKGAAIGQSLNIDIPPPRPKRKPSNPYPRKTNVGAPTLHSGA 120
Query: 752 MSRKPEKSMPLLGENQVIDIKSDSSGERNYQEK 850
KP + L + +D + +S E + ++
Sbjct: 121 KYGKPLTAFASLHGKEAMDFEKESLPEMHTDDE 153
Score = 66.6 bits (161), Expect(2) = 9e-46
Identities = 91/373 (24%), Positives = 145/373 (38%), Gaps = 41/373 (10%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXA-------FIEFLPTTKEIM 990
E+ + + + D NCS+V ++A F EF+P KE++
Sbjct: 153 ERPTTVKENNDENCSKVCTILQEAPCLSVSSANKSSISMSVPQTKSFTFREFIPLVKEVI 212
Query: 991 AEKIATNKSSAPLENSKSFIE-------EETEGRLRKFSQQQSNLGLEDEGKTSKLEGLT 1149
+ TN+S E +E ++T+G + + + N +T K +GLT
Sbjct: 213 PQD-KTNESFPATETENQMLEIGDGKQTQKTDGTCK--TSKLENTCSPKSVQTEKTDGLT 269
Query: 1150 I---LDSSKGDQTNANKSTMHV--SNCRQSMQIDASDSQNPFSLTDQVGDE-------AN 1293
+D +G+Q T+HV N S Q + D S+ +G N
Sbjct: 270 YASTVDEMQGNQNYPRHITVHVVDGNLGTSTQTPSQDMLIQDSIFQPIGGINGQPNLFTN 329
Query: 1294 GSLASTIPVQDASTISYFHQPHTASVPLTHLHDDQDVYRSFFNS-STFPSLIVSTLLQNP 1470
+ ++T Q+ + S HQ PL H++ D Y+SF N STF SLIVSTLLQ+P
Sbjct: 330 SAASNTSESQNNTARSSIHQSFPPC-PLFAQHNEDD-YQSFLNMPSTFSSLIVSTLLQHP 387
Query: 1471 XXXXXXXXXXSFCPSTVLPSTQYIPEAH--------NAHMNPTPSLEXXXXXXXXXXXXX 1626
+F P + ++ +H + + PS+
Sbjct: 388 AAHAAASFAATFWPYANVDTS---ANSHACSQGGFPSRQIGSPPSVTAIAAATVAAATAW 444
Query: 1627 XXXQGLLP-CFPPLAGFAFSPPNINV--PCTGISLPVHVTADD---NFPKEMQQIEDQHK 1788
GLLP C P FA P + P P + D P Q+ +
Sbjct: 445 WAAHGLLPLCTPLHTAFACPPASATAVQPANIGEAPPNTEQGDITLQNPSLKDQMLGVEE 504
Query: 1789 SEAIKPQHASSKS 1827
+EA++ QH++SKS
Sbjct: 505 TEALQAQHSASKS 517
>emb|CAD12767.2| LHY protein [Phaseolus vulgaris]
Length = 723
Score = 150 bits (378), Expect(2) = 3e-45
Identities = 83/153 (54%), Positives = 99/153 (64%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
M+ SS EE+ V+K RKPYTITKQRE+WT+EEH RFLEALKL+GRAWQRIEEHIGTKTAV
Sbjct: 1 MDAYSSGEEV-VVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDIXXXXXXXXXXXXXXXXXXIGTLALEEAM 754
QIRSHAQKFFTKLEKEA+ KG+ GQ DIDI IGT L
Sbjct: 60 QIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTTIGTATLHS-- 117
Query: 755 SRKPEKSMPLLGENQVIDIKSDSSGERNYQEKG 853
K + NQ +D++ + E+ ++G
Sbjct: 118 GAKDGNLVESSHNNQALDLEKEPLPEKYDLDEG 150
Score = 60.8 bits (146), Expect(2) = 3e-45
Identities = 87/366 (23%), Positives = 138/366 (37%), Gaps = 34/366 (9%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMA--EKIA 1005
E L+ + ++D NCS+V ++ + KEI + +++
Sbjct: 149 EGLTTVKENKDENCSKVFKVIQEVPCSSISSANRSSISMSVPLGNSCVLKEITSSVKEVI 208
Query: 1006 TNKSSAPLENSKSFIEEE--------TEGRLRKFSQQQSNLGLED--------EGKTSKL 1137
T EN++SF+ E +G+ + + S L D KT L
Sbjct: 209 TRD-----ENTESFLTVELGNRNLEINDGKQANGTSKNSTLENSDALQTKLVQNEKTDGL 263
Query: 1138 EGLTILDSSKGDQTNANKSTMHVSNCR--QSMQIDASDSQNPFSLTDQVGDE-------A 1290
+ +D +G+Q T+HV + + S Q + D S+ +G +
Sbjct: 264 DSALTIDGMQGNQNYPRHVTVHVVDGKLGTSTQNPSQDMLFRDSMFQPIGGDNGQPNLFT 323
Query: 1291 NGSLASTIPVQDASTISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQN 1467
N + +T Q+ + S HQ P T +QD Y+SF + SSTF +L+VSTLLQN
Sbjct: 324 NSAPTNTSESQNNTARSSVHQSFLPYPPFTQ--HNQDDYQSFLHMSSTFSNLVVSTLLQN 381
Query: 1468 PXXXXXXXXXXSFCPSTVLPSTQYIPEAH-----NAHMNPTPSLEXXXXXXXXXXXXXXX 1632
P +F P ++ P + + PS+
Sbjct: 382 PAAHVAASFAATFWPYANPETSADSPRCSQGGFTSRQIGSPPSVAAIAAATVAAATAWWA 441
Query: 1633 XQGLLP-CFPPLAGFAFSPPNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAIKPQ 1809
GLLP C P A FA P + VTA + +Q + SEA + Q
Sbjct: 442 AHGLLPLCLPLHAAFACPPAS-------------VTAVPSMNPPVQDQKHPEYSEAPQAQ 488
Query: 1810 HASSKS 1827
H+ SKS
Sbjct: 489 HSDSKS 494
>dbj|BAD97866.1| LHY homologue1 [Lemna paucicostata]
Length = 534
Score = 159 bits (402), Expect = 4e-36
Identities = 81/92 (88%), Positives = 83/92 (90%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME SS EEL VIK RKPYTITKQREKWT+EEH RFLEALKLYGRAWQRIEEHIGTKTAV
Sbjct: 1 METCSSGEEL-VIKPRKPYTITKQREKWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEAV KG+ GQVHDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAVSKGVPLGQVHDIDI 91
>ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Setaria italica]
gi|514793380|ref|XP_004972799.1| PREDICTED: protein
LHY-like isoform X2 [Setaria italica]
Length = 747
Score = 157 bits (396), Expect = 2e-35
Identities = 81/117 (69%), Positives = 89/117 (76%)
Frame = +2
Query: 320 SSIWLETLRVDLFFVRAASSIRDKSMEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTR 499
SS W FF+ D ME NSS EE +V+K RKPYTITKQRE+WT+ EH R
Sbjct: 10 SSCWTIPFYFCFFFL-------DLEMEVNSSGEE-TVVKVRKPYTITKQRERWTEAEHKR 61
Query: 500 FLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
FLEALKLYGRAWQRIEEH+GTKTAVQIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 62 FLEALKLYGRAWQRIEEHVGTKTAVQIRSHAQKFFTKLEKEAMNNGTSPGQAHDIDI 118
Score = 88.6 bits (218), Expect = 8e-15
Identities = 96/354 (27%), Positives = 141/354 (39%), Gaps = 30/354 (8%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
+K RK +SE +CSEV+N F+DA PT EI + T
Sbjct: 172 QKFQRKEVSEKGSCSEVLNLFRDAPSASFSSVNKSSSNNGVPRGVEPTKTEI-RDMTTTE 230
Query: 1012 KSS--APLENSKSFIEEETEGRLRKF---------SQQQSNLGLEDEGKTSKLEGLTILD 1158
K+S +E I+ GR+ +++ + ++ K T +D
Sbjct: 231 KNSINPTMEEDVKEIDVPEIGRVNGIHVSSKCDYSNEEYLDFSMQQMKLKPKSSETTYVD 290
Query: 1159 SSKGDQTNANKSTMHVSNCRQSMQIDASDSQNPFSLTDQVGDEANGS-------LASTIP 1317
QT ++ N S+ + +D P DQVG NGS + ST P
Sbjct: 291 K----QTARTSHSLAERNGATSIPVTGTDGTRPDQTGDQVG--VNGSMNPCIHPMLSTDP 344
Query: 1318 VQDAS-TISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXX 1491
D+S T F + A P+ + +QD YRSF N SSTF S++VSTLL NP
Sbjct: 345 KFDSSATPQPFPHNYAAFAPMMQCNCNQDTYRSFVNMSSTFSSMLVSTLLSNPAIHAAAR 404
Query: 1492 XXXSFCP----STVLPSTQYIPE--AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPC 1653
S+ P +T + TQ P ++ PS+ QGLLP
Sbjct: 405 LAASYWPAAEGNTPVDPTQENPAEGVQGRNLGSPPSMASIVAATVAAASAWWATQGLLPF 464
Query: 1654 FPPLAGFAFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F P F F P P+ + P+ D +N K Q+ + Q +SEA++
Sbjct: 465 FTPPMAFPFVPAPSAAFTTADVPRPLDKDRDSPVENAQKGCQEAQKQGQSEALR 518
>dbj|BAD97870.1| LHY homologue1 [Lemna gibba]
Length = 581
Score = 157 bits (396), Expect = 2e-35
Identities = 78/92 (84%), Positives = 83/92 (90%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME SS EEL ++K RKPYTITKQREKWT+EEH RFLEALKLYGRAWQRIEEHIGTKTAV
Sbjct: 1 METCSSGEEL-IVKPRKPYTITKQREKWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEAV KG+ GQVHDI+I
Sbjct: 60 QIRSHAQKFFTKLEKEAVSKGVPLGQVHDIEI 91
>ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26686.1| LHY protein [Zea
mays]
Length = 718
Score = 155 bits (393), Expect = 4e-35
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +VIK RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEVNSSGEE-TVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 79.3 bits (194), Expect = 5e-12
Identities = 91/351 (25%), Positives = 142/351 (40%), Gaps = 27/351 (7%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
+K RK++S +CSEV+N F+DA A IE T +I I N
Sbjct: 145 QKFQRKKLSGKESCSEVLNLFRDAPSPSFSSVNKSSSNHGAPIEASKT--KIRDMTIMEN 202
Query: 1012 KSSAPLENSKSFIEEETEGRLRKFSQQQSNLGLE--DEGKTSKLEGLTILDSSKGDQTNA 1185
S P N + ++E + + + + Q + E EG L + T+
Sbjct: 203 SSLNP--NMQEDVKEINDQEMERLNGTQISSKCEHSHEGYLDISMQQMKLKPESVETTDV 260
Query: 1186 NKSTMHVSNC------RQSMQIDASDSQNPFSLTDQVGDEANGSLASTI-------PVQD 1326
+K T S+ S+ + A++ + +DQVG NGS+ +I P D
Sbjct: 261 DKQTARASHSLAEITGTTSIPVTATEETHSVLTSDQVG--INGSMNPSIHPMFPADPKFD 318
Query: 1327 AS-TISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXX 1500
+S T F + A P+ + +QD +RS N SSTF S++VSTLL NP
Sbjct: 319 SSATPQPFPHNYAAFAPMMQCNCNQDTHRSLVNMSSTFSSMLVSTLLSNPAIHAAARLAA 378
Query: 1501 SFCPST-----VLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPP 1662
S+ P+ + P+ + + + + PS+ QGLLP F P
Sbjct: 379 SYWPAAEGNTPIDPNQENLADGVQGRSIGSPPSMASIVAATVAAASAWWATQGLLPFFAP 438
Query: 1663 LAGFAFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F+F P P+ P + P D +N KE Q+ Q + E +
Sbjct: 439 PMAFSFVPAPSAAFPTVDVPRPSEKDRDCPAENAQKECQEARKQGQLEGFR 489
>dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group]
Length = 725
Score = 155 bits (392), Expect = 6e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-AVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 88.2 bits (217), Expect = 1e-14
Identities = 92/347 (26%), Positives = 138/347 (39%), Gaps = 23/347 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
+KL RK ISE +CSEV+N F++ A PT E+ I
Sbjct: 150 QKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSNHGASRGLEPTKTEVKDVVILER 209
Query: 1012 KS--SAPLENSKSFIEEETE---GRLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKGDQ 1176
S + +++K ++E E G S+ D ++++ D
Sbjct: 210 DSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENCLDTSSQQFKPKSNSVETTYVDW 269
Query: 1177 TNANKSTMHVS-NCRQSMQIDASDSQNPFSLTDQVGDEA---NGSLASTIPVQDASTISY 1344
+ A S + N Q ++ +P +DQ+G + N + T+PV +
Sbjct: 270 SAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGASGTMNQCIHPTLPVDPKFDGNA 329
Query: 1345 FHQP----HTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSFC 1509
QP + A P+ H +QD YRSF N SSTF S++VSTLL NP S+
Sbjct: 330 AAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYW 389
Query: 1510 P----STVLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLAGF 1674
P +T P+ + + E A +H P++ QGLLP FPP F
Sbjct: 390 PTVDGNTPDPNQENLSESAQGSHAGSPPNMASIVTATVAAASAWWATQGLLPLFPPPIAF 449
Query: 1675 AFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F P P+ + D DN KE+Q+ Q EA+K
Sbjct: 450 PFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQETRKQDNFEAMK 496
>gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare subsp. vulgare]
Length = 717
Score = 155 bits (392), Expect = 6e-35
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +VIK RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-TVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 83.2 bits (204), Expect = 3e-13
Identities = 90/345 (26%), Positives = 134/345 (38%), Gaps = 22/345 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEI--MAEKIA 1005
+KL RK +S + +CSEV+N F++A PT EI MA
Sbjct: 145 QKLQRKELSGNGSCSEVINIFREAPSASFSSSNKSSSNHGVSGGIEPTKTEIKDMAAMER 204
Query: 1006 TNKSSAPLENSKSFIEEETEGRLR-----KFSQQQSNLGLEDEGKTSKLEGLTILDSSKG 1170
+ S ++ K ++E E R K+ + + L+ K +L+ T+ + G
Sbjct: 205 KSTSVDVAKDVKDINDQEMERNNRVHISSKYDRSHEDC-LDSSMKHMQLKPNTVETTYTG 263
Query: 1171 DQTNANKSTMHVSNCRQSMQIDASDSQNPFSLTDQVGDEANGS---LASTIPVQ----DA 1329
++ +P DQVG ANGS + T+PV +
Sbjct: 264 QHVAGAPLYQMNKTGATGTPDPGTEGSHPDQTNDQVGG-ANGSMDCIHPTLPVDLKFGSS 322
Query: 1330 STISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSF 1506
ST F ++ P +QD YRS + SSTF +++VSTLL NP S+
Sbjct: 323 STAQPFPHNYSGFAPTMQCQCNQDAYRSSVDMSSTFSNMLVSTLLSNPTVHAAARLAASY 382
Query: 1507 CPST-----VLPSTQ-YIPEAHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLA 1668
P+ V P+ + A H+ PS+ QGLLP F P
Sbjct: 383 WPAADSNIPVDPNQGIFAQNAQGRHIVSPPSMASVVAATVAAASAWWATQGLLPLFAPPM 442
Query: 1669 GFAFSP-PNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAI 1800
F F P P + P + DN PKE Q + Q + EA+
Sbjct: 443 AFPFVPVPTASFPTADVQRATENCPVDNAPKECQVAQGQGQPEAM 487
>dbj|BAJ92173.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285653|gb|AEW48244.1| circadian clock associated 1
[Hordeum vulgare subsp. vulgare]
gi|364285657|gb|AEW48246.1| circadian clock associated 1
[Hordeum vulgare subsp. vulgare]
gi|397911976|gb|AFO69281.1| circadian clock associated 1
[Hordeum vulgare]
Length = 717
Score = 155 bits (392), Expect = 6e-35
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +VIK RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-TVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 83.6 bits (205), Expect = 3e-13
Identities = 90/345 (26%), Positives = 135/345 (39%), Gaps = 22/345 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEI--MAEKIA 1005
+KL RK +S + +CSEV+N F++A PT EI MA
Sbjct: 145 QKLQRKELSGNGSCSEVINIFREAPSASFSSSNKSSSNHGVSGGIEPTKTEIKDMAAMER 204
Query: 1006 TNKSSAPLENSKSFIEEETEGRLR-----KFSQQQSNLGLEDEGKTSKLEGLTILDSSKG 1170
+ S ++ K ++E E R K+ + + L+ K +L+ T+ + G
Sbjct: 205 KSTSVDVAKDVKDINDQEMERNNRVHISSKYDRSHEDC-LDSSMKHMQLKPNTVETTYTG 263
Query: 1171 DQTNANKSTMHVSNCRQSMQIDASDSQNPFSLTDQVGDEANGS---LASTIPVQ----DA 1329
+ ++ +P DQVG ANGS + T+PV +
Sbjct: 264 QHVASAPLYQMNKTGATGTPDPGTEGSHPDQTNDQVGG-ANGSMDCIHPTLPVDLKFGSS 322
Query: 1330 STISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSF 1506
ST F ++ P +QD YRS + SSTF +++VSTLL NP S+
Sbjct: 323 STAQPFPHNYSGFAPTMQCQCNQDAYRSSVDMSSTFSNMLVSTLLSNPTVHAAARLAASY 382
Query: 1507 CPST-----VLPSTQ-YIPEAHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLA 1668
P+ V P+ + A H+ PS+ QGLLP F P
Sbjct: 383 WPAADSNIPVDPNQGIFAQNAQGRHIVSPPSMASVVAATVAAASAWWATQGLLPLFAPPM 442
Query: 1669 GFAFSP-PNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAI 1800
F F P P + P + DN PKE Q + Q + EA+
Sbjct: 443 AFPFVPVPTASFPTADVQRATENCPVDNAPKECQVAQGQGQPEAM 487
>gb|ADW09013.1| LHY [Triticum aestivum]
Length = 648
Score = 155 bits (392), Expect = 6e-35
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +VIK RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-TVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 92.4 bits (228), Expect = 6e-16
Identities = 92/351 (26%), Positives = 134/351 (38%), Gaps = 28/351 (7%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
+KL RK +SE+ +CSEV+N F++A PT E N
Sbjct: 145 QKLQRKELSENGSCSEVINIFREAPSASFSSSNKSSSNHGVSGGIEPTKTE--------N 196
Query: 1012 KSSAPLENSKSFIE----------EETEGRLRKFSQQQSNLGLEDEGKTSKLEGLTILDS 1161
K A +E + I+ +E E R + ED S ++
Sbjct: 197 KDIATMERKSTSIDVGKDVKDINDQEMERNNRVHISSNYDRSHEDCLDNSMKHMQLKPNT 256
Query: 1162 SKGDQTNANKSTMHVSNCRQSMQIDASDSQNPFSLTDQVGDEANGSLAS------TIPVQ 1323
++ T + ++ + ++ A D S DQ D G+ S T+PV
Sbjct: 257 AETTYTGQHAASAPLYQMNKTGATGAPDPGTEGSHPDQTSDRVGGANGSMDCIHPTLPVD 316
Query: 1324 ----DASTISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXX 1488
+ST F + P H +QD YRS N SSTF +++VSTLL NP
Sbjct: 317 PKIGSSSTAQSFPHNYAGFAPTMQCHCNQDAYRSSLNMSSTFSNMLVSTLLSNPTVHAAA 376
Query: 1489 XXXXSFCPST-----VLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLP 1650
S+ P+ V P+ + E A H+ PS+ QGLLP
Sbjct: 377 RLAASYWPAADSNIPVGPNQEVFAENAQGRHIGSPPSMASVVAATVAAASAWWATQGLLP 436
Query: 1651 CFPPLAGFAFSP-PNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAI 1800
F P F F P P + P T + DN PKE Q ++Q + EA+
Sbjct: 437 LFAPPMAFPFVPVPTASFPTTDVQRATENWPVDNAPKECQVAQEQGQPEAM 487
>gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indica Group]
Length = 719
Score = 155 bits (392), Expect = 6e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-AVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 91.7 bits (226), Expect = 1e-15
Identities = 94/347 (27%), Positives = 139/347 (40%), Gaps = 23/347 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
EKL RK ISE +CSEV+N F++ A PT E+ I
Sbjct: 144 EKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSNHGASRGLEPTKTEVKDVVILER 203
Query: 1012 KS--SAPLENSKSFIEEETE---GRLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKGDQ 1176
S + +++K ++E E G S+ D ++++ D
Sbjct: 204 DSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENCLDTSSQQFKPKSNSVETTYVDW 263
Query: 1177 TNANKSTMHVS-NCRQSMQIDASDSQNPFSLTDQVGDEA---NGSLASTIPVQDASTISY 1344
+ A S + N Q ++ +P +DQ+G + N + T+PV +
Sbjct: 264 SAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGASGTMNQCIHPTLPVDPKFDGNA 323
Query: 1345 FHQP----HTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSFC 1509
QP + A P+ H +QD YRSF N SSTF S++VSTLL NP S+
Sbjct: 324 AAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYW 383
Query: 1510 P----STVLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLAGF 1674
P +T P+ + + E A +H P++ QGLLP FPP F
Sbjct: 384 PTVDGNTPDPNQENLSESAQGSHAGSPPNMASIVAATVAAASAWWATQGLLPLFPPPIAF 443
Query: 1675 AFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F P P+ + D DN KE+Q+ Q SEA+K
Sbjct: 444 PFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQETRKQDNSEAMK 490
>ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group]
gi|113623001|dbj|BAF22946.1| Os08g0157600 [Oryza sativa
Japonica Group] gi|222639944|gb|EEE68076.1| hypothetical
protein OsJ_26106 [Oryza sativa Japonica Group]
Length = 719
Score = 155 bits (392), Expect = 6e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-AVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 89.4 bits (220), Expect = 5e-15
Identities = 93/347 (26%), Positives = 138/347 (39%), Gaps = 23/347 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
EKL RK ISE +CSEV+N F++ A PT E+ I
Sbjct: 144 EKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSNHGASRGLEPTKTEVKDVVILER 203
Query: 1012 KS--SAPLENSKSFIEEETE---GRLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKGDQ 1176
S + +++K ++E E G S+ D ++++ D
Sbjct: 204 DSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENCLDTSSQQFKPKSNSVETTYVDW 263
Query: 1177 TNANKSTMHVS-NCRQSMQIDASDSQNPFSLTDQVGDEA---NGSLASTIPVQDASTISY 1344
+ A S + N Q ++ +P +DQ+G + N + T+PV +
Sbjct: 264 SAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGASGTMNQCIHPTLPVDPKFDGNA 323
Query: 1345 FHQP----HTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSFC 1509
QP + A P+ H +QD YRSF N SSTF S++VSTLL NP S+
Sbjct: 324 AAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYW 383
Query: 1510 P----STVLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLAGF 1674
P +T P+ + + E A +H P++ QGLLP FPP F
Sbjct: 384 PTVDGNTPDPNQENLSESAQGSHAGSPPNMASIVTATVAAASAWWATQGLLPLFPPPIAF 443
Query: 1675 AFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F P P+ + D DN KE+Q+ Q EA+K
Sbjct: 444 PFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQETRKQDNFEAMK 490
>ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Oryza brachyantha]
gi|573953750|ref|XP_006659145.1| PREDICTED: protein
CCA1-like isoform X9 [Oryza brachyantha]
Length = 718
Score = 155 bits (391), Expect = 7e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-AVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 102 bits (253), Expect = 7e-19
Identities = 100/348 (28%), Positives = 144/348 (41%), Gaps = 24/348 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
EKL RK ISE +CSEV+N F + A PT EI I
Sbjct: 144 EKLQRKEISEKGSCSEVINLF-EIPSASFSSVNKGSSNHDASRGMEPTKTEIKDVVILER 202
Query: 1012 KS--SAPLENSKSFIEEETEGRLRKF----SQQQSNLGLEDEGKTSKLEGLTILDSSKGD 1173
S + ++N+K ++E E RL + S+ D K ++++ D
Sbjct: 203 DSIHNGVVKNAKDINDQEME-RLNEMHISSKSDHSHENCLDASKQQSKPKPNSVEATYAD 261
Query: 1174 QTNANKSTMHVS-NCRQSMQIDASDSQNPFSLTDQVGDEA---NGSLASTIPVQD----A 1329
+ S + N + ++ +P +DQ+G + N + T+PV +
Sbjct: 262 WSARRDSHYQMDRNGVTGIPATGTEGSHPDQTSDQMGGASGTMNQCIHPTLPVDPKFDRS 321
Query: 1330 STISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSF 1506
T F +TA P+ H DQD YRSF N SSTF S++VSTLL NP S+
Sbjct: 322 DTAQPFPHNYTAFAPIMQCHCDQDAYRSFVNMSSTFSSMLVSTLLSNPAIHAAARLAASY 381
Query: 1507 CP----STVLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLAG 1671
P ++ P+ + I E A +H P++ QGLLP FPP
Sbjct: 382 WPAIDSNSPDPNQENISESAQGSHAGSPPNMASIVAATIAAASAWWATQGLLPLFPPPIA 441
Query: 1672 FAFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F F P P+ P + D DN KE+Q+ Q KSEA+K
Sbjct: 442 FPFVPAPSAPFPTADVQRAPEKDIDCPIDNAQKELQETRKQDKSEAMK 489
>ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Oryza brachyantha]
gi|573953736|ref|XP_006659138.1| PREDICTED: protein
CCA1-like isoform X2 [Oryza brachyantha]
gi|573953738|ref|XP_006659139.1| PREDICTED: protein
CCA1-like isoform X3 [Oryza brachyantha]
gi|573953740|ref|XP_006659140.1| PREDICTED: protein
CCA1-like isoform X4 [Oryza brachyantha]
gi|573953742|ref|XP_006659141.1| PREDICTED: protein
CCA1-like isoform X5 [Oryza brachyantha]
gi|573953744|ref|XP_006659142.1| PREDICTED: protein
CCA1-like isoform X6 [Oryza brachyantha]
gi|573953746|ref|XP_006659143.1| PREDICTED: protein
CCA1-like isoform X7 [Oryza brachyantha]
Length = 724
Score = 155 bits (391), Expect = 7e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEINSSGEE-AVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 100 bits (250), Expect = 2e-18
Identities = 99/348 (28%), Positives = 144/348 (41%), Gaps = 24/348 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
+KL RK ISE +CSEV+N F + A PT EI I
Sbjct: 150 QKLQRKEISEKGSCSEVINLF-EIPSASFSSVNKGSSNHDASRGMEPTKTEIKDVVILER 208
Query: 1012 KS--SAPLENSKSFIEEETEGRLRKF----SQQQSNLGLEDEGKTSKLEGLTILDSSKGD 1173
S + ++N+K ++E E RL + S+ D K ++++ D
Sbjct: 209 DSIHNGVVKNAKDINDQEME-RLNEMHISSKSDHSHENCLDASKQQSKPKPNSVEATYAD 267
Query: 1174 QTNANKSTMHVS-NCRQSMQIDASDSQNPFSLTDQVGDEA---NGSLASTIPVQD----A 1329
+ S + N + ++ +P +DQ+G + N + T+PV +
Sbjct: 268 WSARRDSHYQMDRNGVTGIPATGTEGSHPDQTSDQMGGASGTMNQCIHPTLPVDPKFDRS 327
Query: 1330 STISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSF 1506
T F +TA P+ H DQD YRSF N SSTF S++VSTLL NP S+
Sbjct: 328 DTAQPFPHNYTAFAPIMQCHCDQDAYRSFVNMSSTFSSMLVSTLLSNPAIHAAARLAASY 387
Query: 1507 CP----STVLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLAG 1671
P ++ P+ + I E A +H P++ QGLLP FPP
Sbjct: 388 WPAIDSNSPDPNQENISESAQGSHAGSPPNMASIVAATIAAASAWWATQGLLPLFPPPIA 447
Query: 1672 FAFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F F P P+ P + D DN KE+Q+ Q KSEA+K
Sbjct: 448 FPFVPAPSAPFPTADVQRAPEKDIDCPIDNAQKELQETRKQDKSEAMK 495
>gb|AFW61192.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 720
Score = 154 bits (390), Expect = 9e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEVNSSGEE-TVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAMNNGTSPGQAHDIDI 91
Score = 79.3 bits (194), Expect = 5e-12
Identities = 91/346 (26%), Positives = 137/346 (39%), Gaps = 22/346 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
+ RK +SE + SEV+N F+DA A + E I N
Sbjct: 145 QNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSSNHGAPRRTEASKTESRDMSIMEN 204
Query: 1012 KSSAP--LENSKSFIEEETEG----RLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKGD 1173
S P E+ K ++E E ++R + L+ + KL ++ + +
Sbjct: 205 NSFNPNTQEDVKVISDQEMERLNGIQIRSKCEHSHEGYLDISTQQMKLMPKSVETTYVDE 264
Query: 1174 QTNANKSTMHVSNCRQSMQIDASDSQNPFSLTDQVGDEANGSLASTI-PVQDA------- 1329
QT T+ S+ S+ + + +P +DQVG NGS+ I P+ A
Sbjct: 265 QTARASHTLAESDGTASIPVTVPEGTHPDQTSDQVG--INGSMNPCIHPMVSADPKFGSS 322
Query: 1330 STISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSF 1506
+T F + A P+ + +QD YRSF N SSTF S++VSTLL NP S+
Sbjct: 323 ATPQTFPHNYAAFAPMMQCNCNQDTYRSFTNMSSTFSSMLVSTLLSNPAIHAAARLAASY 382
Query: 1507 CP----STVLPSTQYIPE--AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLA 1668
P +T + Q P ++ PS+ QGLLP F P
Sbjct: 383 WPAAEGNTPIDPNQENPADGVQGRNIGSPPSMVSIVAATVAAASAWWATQGLLPFFAPPV 442
Query: 1669 GFAFSP-PNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAIK 1803
F F P P+ P + P D + P E QIE Q + ++
Sbjct: 443 AFPFVPAPSAAFPTVDVPRPSE--KDRDCPAENAQIECQEARKQVQ 486
>ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium distachyon]
Length = 716
Score = 154 bits (390), Expect = 9e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +VIK RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEMNSSGEE-TVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PG+ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGEAHDIDI 91
Score = 74.3 bits (181), Expect = 2e-10
Identities = 91/341 (26%), Positives = 135/341 (39%), Gaps = 20/341 (5%)
Frame = +1
Query: 838 LSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEI--MAEKIATN 1011
L + + E ++CSEV+N F+DA A +E T EI M T+
Sbjct: 144 LQKLQGKESSSCSEVLNLFRDAQSASFSSVNKSSSNHGASMEIEATKTEIKDMTTMDRTS 203
Query: 1012 KSSAPLENSKSFIEEETEGRLR-KFSQQQSNLG---LEDEGKTSKLEGLTILDSSKGDQT 1179
S ++ K ++E E R S + +L L++ + KL+ ++ + + DQ
Sbjct: 204 VSIDMEKDVKDINDQEMERPNRIHISAKYDHLHDDCLDNSRQHVKLKPKSV-EITHTDQH 262
Query: 1180 NANKSTMHVSNCRQSMQIDASDSQNPFSLT-DQVGDEANGSLASTIPV-------QDAST 1335
S + S ++P T DQVG A G++ P ++ST
Sbjct: 263 PTRASHYQMDRTGASGIPVIGTEKSPADQTNDQVG-VAKGNMNCLHPTLSVDPKFDNSST 321
Query: 1336 ISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSFCP 1512
+ A P+ H +QD Y+S N SS F S++VSTLL NP S+ P
Sbjct: 322 AQPITHNYAAFAPMMQCHCNQDAYKSSVNMSSAFSSMLVSTLLSNPAVHAAARLAASYWP 381
Query: 1513 STVLP--STQYIP--EAHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLAGFAF 1680
S P Q P A H+ PS+ QGLLP F P F F
Sbjct: 382 SADSPVDPNQESPSDNAQGRHIGSPPSMASIVAATVAAASAWWATQGLLPLFAPPMAFPF 441
Query: 1681 SP-PNINVPCTGISLPVHVTADDNFPKEMQQIEDQHKSEAI 1800
P P+ + P + D PKE Q + Q + EA+
Sbjct: 442 VPVPSASFPTADVQRASENFPVDCTPKECQVAQKQGQPEAV 482
>ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27662.1| LHY protein [Zea
mays]
Length = 720
Score = 154 bits (390), Expect = 9e-35
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRIEEH+GTKTAV
Sbjct: 1 MEMNSSGEE-TVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAMNNGTSPGQAHDIDI 91
Score = 81.3 bits (199), Expect = 1e-12
Identities = 95/357 (26%), Positives = 142/357 (39%), Gaps = 25/357 (7%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
+ RK +SE + SEV+N F+DA A + E I N
Sbjct: 145 QNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSSNHGAPRRTEASKTESRDMSIMEN 204
Query: 1012 KSSAP--LENSKSFIEEETEG----RLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKGD 1173
S P E+ K ++E E ++R + L+ + KL ++ + +
Sbjct: 205 NSFNPNTQEDVKVISDQEMERLNGIQIRSKCEHSHEGYLDISTQQMKLMPKSVETTYVDE 264
Query: 1174 QTNANKSTMHVSNCRQSMQIDASDSQNPFSLTDQVGDEANGSLASTI-PVQDA------- 1329
QT T+ SN S+ + + +P +DQVG NGS+ I P+ A
Sbjct: 265 QTARASHTLAESNGTASVPVTVPEGTHPDQTSDQVG--INGSMNPCIHPMVSADPKFGSS 322
Query: 1330 STISYFHQPHTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSF 1506
+T F + A P+ + +QD YRSF N SSTF S++VSTLL NP S+
Sbjct: 323 ATPQTFPHNYAAFAPMMQCNCNQDTYRSFTNMSSTFSSMLVSTLLSNPAIHAAARLAASY 382
Query: 1507 CP----STVLPSTQYIPE--AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLA 1668
P +T + Q P ++ PS+ QGLLP F P
Sbjct: 383 WPAAEGNTPIDPNQENPADGVQGRNIGSPPSMASIVAATVAAASAWWATQGLLPFFAPPV 442
Query: 1669 GFAFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIKPQHASSKS 1827
F F P P+ P + P D +N E Q+ Q + E ++ ASS+S
Sbjct: 443 AFPFVPAPSAAFPTVDVPRPSEKDRDCPVENAQNECQEARKQVQFEGLRVA-ASSES 498
>gb|AAR20887.1| circadian oscillator component [Oryza sativa Japonica Group]
Length = 603
Score = 154 bits (388), Expect = 2e-34
Identities = 74/92 (80%), Positives = 82/92 (89%)
Frame = +2
Query: 395 MEGNSSDEELSVIKKRKPYTITKQREKWTQEEHTRFLEALKLYGRAWQRIEEHIGTKTAV 574
ME NSS EE +V+K RKPYTITKQRE+WT+ EH RFLEALKLYGRAWQRI+EH+GTKTAV
Sbjct: 1 MEINSSGEE-AVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIKEHVGTKTAV 59
Query: 575 QIRSHAQKFFTKLEKEAVEKGIAPGQVHDIDI 670
QIRSHAQKFFTKLEKEA+ G +PGQ HDIDI
Sbjct: 60 QIRSHAQKFFTKLEKEAINNGTSPGQAHDIDI 91
Score = 91.7 bits (226), Expect = 1e-15
Identities = 94/347 (27%), Positives = 139/347 (40%), Gaps = 23/347 (6%)
Frame = +1
Query: 832 EKLSRKRISEDANCSEVVNAFKDAXXXXXXXXXXXXXXXXAFIEFLPTTKEIMAEKIATN 1011
EKL RK ISE +CSEV+N F++ A PT E+ I
Sbjct: 144 EKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSNHGASRGLEPTKTEVKDVVILER 203
Query: 1012 KS--SAPLENSKSFIEEETE---GRLRKFSQQQSNLGLEDEGKTSKLEGLTILDSSKGDQ 1176
S + +++K ++E E G S+ D ++++ D
Sbjct: 204 DSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENCLDTSSQQFKPKSNSVETTYVDW 263
Query: 1177 TNANKSTMHVS-NCRQSMQIDASDSQNPFSLTDQVGDEA---NGSLASTIPVQDASTISY 1344
+ A S + N Q ++ +P +DQ+G + N + T+PV +
Sbjct: 264 SAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGASGTMNQCIHPTLPVDPKFDGNA 323
Query: 1345 FHQP----HTASVPLTHLHDDQDVYRSFFN-SSTFPSLIVSTLLQNPXXXXXXXXXXSFC 1509
QP + A P+ H +QD YRSF N SSTF S++VSTLL NP S+
Sbjct: 324 AAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYW 383
Query: 1510 P----STVLPSTQYIPE-AHNAHMNPTPSLEXXXXXXXXXXXXXXXXQGLLPCFPPLAGF 1674
P +T P+ + + E A +H P++ QGLLP FPP F
Sbjct: 384 PTVDGNTPDPNQENLSESAQGSHAGSPPNMASIVTATVAAASAWWATQGLLPLFPPPIAF 443
Query: 1675 AFSP-PNINVPCTGISLPVHVTAD---DNFPKEMQQIEDQHKSEAIK 1803
F P P+ + D DN KE+Q+ Q SEA+K
Sbjct: 444 PFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQETRKQDNSEAMK 490