BLASTX nr result

ID: Zingiber25_contig00003597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00003597
         (553 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277734.1| PREDICTED: uncharacterized protein At5g39865...    60   5e-07
ref|XP_003633843.1| PREDICTED: uncharacterized protein At5g39865...    59   1e-06
ref|XP_006338464.1| PREDICTED: uncharacterized protein At3g28850...    57   2e-06
ref|XP_004232227.1| PREDICTED: uncharacterized protein At3g28850...    57   2e-06

>ref|XP_002277734.1| PREDICTED: uncharacterized protein At5g39865-like isoform 1 [Vitis
           vinifera]
          Length = 429

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 69/201 (34%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
 Frame = -1

Query: 544 MGCAVSKQP------GSGRWFGRSKSLPVHLAXXXXXXXXXGHHAVILTSSTFGALRLD- 386
           MGCA SKQP       S     RS S+ VH            +H V LTS+T G L+LD 
Sbjct: 1   MGCASSKQPRCRHCQNSFAPVPRSYSMHVH---HPPQSKGDSYHVVALTSTTLGTLKLDT 57

Query: 385 --RGDNSSDDEATAKVSTDLQAAVS-----MAAVKASCAREIGLC-TETWSEMIERRIXX 230
             +  NS  +    +   D +  V+      A  K +    +GL   +TWS MI  +I  
Sbjct: 58  SHQNRNSHVNGTIVEEEEDKENKVNGNENVKAGDKKNKGFSMGLIEAKTWSSMINEKIPK 117

Query: 229 XXXXXXXXXXXV----INASELMAGLEDASPLLLPPAAHHRSFSSHTTR---DAHFSSPD 71
                           INA ELM GLEDASPL  P   H RSFS    R    A F  P 
Sbjct: 118 IAPKTPIRTPPGEPETINAWELMEGLEDASPLRSP--NHLRSFSFDIDRRSIPAPFELPK 175

Query: 70  SEFTSSYSPKLEFMDLNHDDS 8
           S F  +       M LN  DS
Sbjct: 176 SRFQENGEASPRPMWLNLVDS 196


>ref|XP_003633843.1| PREDICTED: uncharacterized protein At5g39865-like isoform 2 [Vitis
           vinifera]
          Length = 369

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 70/208 (33%), Positives = 86/208 (41%), Gaps = 27/208 (12%)
 Frame = -1

Query: 544 MGCAVSKQP------GSGRWFGRSKSLPVHLAXXXXXXXXXGHHAVILTSSTFGALRLD- 386
           MGCA SKQP       S     RS S+ VH            +H V LTS+T G L+LD 
Sbjct: 1   MGCASSKQPRCRHCQNSFAPVPRSYSMHVH---HPPQSKGDSYHVVALTSTTLGTLKLDT 57

Query: 385 --RGDNSSDDEATAKVSTDLQAAVS-----MAAVKASCAREIGLC-TETWSEMIERRIXX 230
             +  NS  +    +   D +  V+      A  K +    +GL   +TWS MI  +I  
Sbjct: 58  SHQNRNSHVNGTIVEEEEDKENKVNGNENVKAGDKKNKGFSMGLIEAKTWSSMINEKIPK 117

Query: 229 XXXXXXXXXXXV----INASELMAGLEDASPLLLPPAAHHRSFSSHTTR---DAHFSSPD 71
                           INA ELM GLEDASPL  P   H RSFS    R    A F  P 
Sbjct: 118 IAPKTPIRTPPGEPETINAWELMEGLEDASPLRSP--NHLRSFSFDIDRRSIPAPFELPK 175

Query: 70  SEF--TSSYSPK---LEFMDLNHDDSIF 2
           S F      SP+    +F  L+H    F
Sbjct: 176 SRFQENGEASPRPDDYDFDVLDHKSQSF 203


>ref|XP_006338464.1| PREDICTED: uncharacterized protein At3g28850-like [Solanum
           tuberosum]
          Length = 419

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 54/162 (33%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
 Frame = -1

Query: 544 MGCAVSKQPGSGRWFGRSKSLPVHLAXXXXXXXXXGHHAVILTSSTFGALRLDRGDNSSD 365
           MGCA SK     +   R+   PV  +          +H V LTSST G+L+LD  + S  
Sbjct: 1   MGCATSKPKVCHKC--RAPCSPVRRSYSMHDDG---YHMVALTSSTLGSLKLDPMNQSQS 55

Query: 364 DEATAKVSTDLQAAVSMAAVKASCAREIGLCTETWSEMIERRI----XXXXXXXXXXXXX 197
            +     S DL     + + K   A  + +  +TWSEMI  +I                 
Sbjct: 56  IKDGDTSSFDLCDFDEVKSCKEEFAMGL-IEAKTWSEMINEKIPKVVPKTPIRTPPGEPE 114

Query: 196 VINASELMAGLEDASPLLLPPAAHHRSFSSHTTRDAHFSSPD 71
            IN  ELM GLED+SP  L P  H RSFS H + + + S  D
Sbjct: 115 TINTWELMEGLEDSSP--LKPVHHVRSFSFHVSPNPNSSQYD 154


>ref|XP_004232227.1| PREDICTED: uncharacterized protein At3g28850-like [Solanum
           lycopersicum]
          Length = 419

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 53/153 (34%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
 Frame = -1

Query: 544 MGCAVSKQPGSGRWFGRSKSLPVHLAXXXXXXXXXGHHAVILTSSTFGALRLDRGDNSSD 365
           MGCA SK     +   R+   PV  +          +H V LTSST G+L+LD  + S  
Sbjct: 1   MGCATSKPKVCHKC--RAPCSPVRRSYSMHDDG---YHRVALTSSTLGSLKLDPMNQSQS 55

Query: 364 DEATAKVSTDLQAAVSMAAVKASCAREIGLCTETWSEMIERRI----XXXXXXXXXXXXX 197
            +     S DL     + + K   A  + +  +TWSEMI  +I                 
Sbjct: 56  IKDGDTSSFDLCDFDEVKSCKEEFAMGL-IEAKTWSEMINEKIPKVVPKTPVRTPPGEPE 114

Query: 196 VINASELMAGLEDASPLLLPPAAHHRSFSSHTT 98
            IN  ELM GLED+SP  L PA H RSFS H +
Sbjct: 115 TINTWELMEGLEDSSP--LKPAHHVRSFSFHVS 145


Top