BLASTX nr result
ID: Zingiber25_contig00003440
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00003440
(670 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [A... 270 2e-70
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein... 269 5e-70
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr... 269 5e-70
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 268 1e-69
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote... 265 1e-68
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe... 262 6e-68
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus... 261 2e-67
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao... 260 2e-67
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop... 259 4e-67
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 256 6e-66
ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein... 255 8e-66
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 255 1e-65
ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr... 254 1e-65
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop... 254 2e-65
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein... 253 3e-65
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 253 3e-65
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp.... 251 1e-64
ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [S... 251 1e-64
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 249 5e-64
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th... 249 7e-64
>ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [Amborella trichopoda]
gi|548857220|gb|ERN15034.1| hypothetical protein
AMTR_s00032p00242160 [Amborella trichopoda]
Length = 624
Score = 270 bits (691), Expect = 2e-70
Identities = 134/187 (71%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LNC+WGS++SAARWQMA +SDS PL EF EW EVE+G GRMPT+Q+V+DK IQ++
Sbjct: 328 YLNCVWGSEASAARWQMARISDSAPLEKEFLEWVREVERGGGRMPTKQDVIDKGEAIQRL 387
Query: 181 SN-FVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKE 357
S+ FVYSAATVKQML EKKSAS RP NIA EKDRLR+++E+A++R D E R++ARL+E
Sbjct: 388 SSSFVYSAATVKQMLQEKKSASTRPSNIAAEKDRLRKEMELAESRLDHAEAERVRARLQE 447
Query: 358 LENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRS 537
LEN+SQ +KK D KAV LAEMNR+NRAENFKNAS LKPVNT+LKAGEAGYDPFSRRWTRS
Sbjct: 448 LENLSQQSKKKDAKAVMLAEMNRRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRS 507
Query: 538 SNYYISK 558
NYY+SK
Sbjct: 508 RNYYVSK 514
>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Citrus sinensis]
Length = 643
Score = 269 bits (688), Expect = 5e-70
Identities = 141/210 (67%), Positives = 165/210 (78%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN WG++SSAARWQMAMVSDSPPL +EF +W EVE+ +GRMP++Q+VL+KK IQKI
Sbjct: 331 YLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKI 390
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LEVAQ+R D +M RIK RL+EL
Sbjct: 391 NTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQEL 450
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ +K D KA+RLAEMNRKNR ENFKNAS LK VNT+LKAGEAGYDPFSRRWTRS
Sbjct: 451 E-ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSR 509
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDGDVN 630
NYYISK G E+ E +GD N
Sbjct: 510 NYYISKPG----------EEVTAEANGDKN 529
>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
gi|557524836|gb|ESR36142.1| hypothetical protein
CICLE_v10028000mg [Citrus clementina]
Length = 643
Score = 269 bits (688), Expect = 5e-70
Identities = 141/210 (67%), Positives = 164/210 (78%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN WG++SSAARWQMAMVSDSPPL +EF +W EVE+ GRMP++Q+VL+KK IQKI
Sbjct: 331 YLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKI 390
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LEVAQ+R D +M RIK RL+EL
Sbjct: 391 NTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQEL 450
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ +K D KA+RLAEMNRKNR ENFKNAS LK VNT+LKAGEAGYDPFSRRWTRS
Sbjct: 451 E-ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSR 509
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDGDVN 630
NYYISK G E+ E +GD N
Sbjct: 510 NYYISKPG----------EEVTAEANGDKN 529
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 268 bits (684), Expect = 1e-69
Identities = 137/213 (64%), Positives = 168/213 (78%), Gaps = 1/213 (0%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN IWG++SSAARWQMAM+SDS P DE+ +W EVE+ GRMPT+Q++L+KK I+K
Sbjct: 344 YLNVIWGNESSAARWQMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKS 403
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LEVAQ+++D E+ RI+AR++EL
Sbjct: 404 NTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQEL 463
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ T+ D KA+RLAEMNRKNRAENF+NAS LKPVNT+LKAGEAGYDPFSRRWTRS
Sbjct: 464 E-ASRQTQGKDAKAIRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSR 522
Query: 541 NYYISK-FGGDDNSTTVDIEQGKVEVDGDVNEA 636
NYY+SK GGD + T + G V V A
Sbjct: 523 NYYVSKPAGGDAAAATNNEASGTVAVANKTESA 555
>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
Length = 658
Score = 265 bits (676), Expect = 1e-68
Identities = 136/223 (60%), Positives = 164/223 (73%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG+++SAARWQMAMVSDS P +EF +W EVE+ GRMPT+ ++LDKK I+KI
Sbjct: 342 YLNVVWGNENSAARWQMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKI 401
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSAATVKQML EKKSAS RP+NIA+EKDRLR +LEVAQ++ D E+ RIK RL+EL
Sbjct: 402 NTFVYSAATVKQMLQEKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQEL 461
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ K+ D KA+RLAEMNRKNR ENFKNAS LKPVNT LKAGEAGYDPFSRRWTRS
Sbjct: 462 E-ASRKAKQTDAKAIRLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSR 520
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDGDVNEAIKMNVVETGEA 669
NYY+ K G + + D + N + E G A
Sbjct: 521 NYYVGKPGEVKEDSGANAGNNGASTDAENNGRHGIVAAEAGIA 563
>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 262 bits (670), Expect = 6e-68
Identities = 134/223 (60%), Positives = 164/223 (73%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG+++SAARWQMAM+SDS PL +EF +W EVE+ GR+P++Q+VL+KK I+KI
Sbjct: 330 YLNVVWGNENSAARWQMAMISDSAPLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKI 389
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSAATVKQM+ EKKSAS RP+NIA+EKDRLR +LEVAQ++ D E+ RIK RL++L
Sbjct: 390 NTFVYSAATVKQMIEEKKSASSRPLNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQL 449
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E Q K D KAVRLAEMNRKNR ENFKNAS LKPV T LKAGEAGYDPFSRRWTRS
Sbjct: 450 EARRQSQGK-DSKAVRLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSR 508
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDGDVNEAIKMNVVETGEA 669
NYY+SK G ++ D + N + V G A
Sbjct: 509 NYYVSKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMA 551
>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
Length = 654
Score = 261 bits (666), Expect = 2e-67
Identities = 132/201 (65%), Positives = 158/201 (78%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG++SSAARWQMAMVSDS PL +EF +W EV++ GRMPT+Q+VL+KK IQK
Sbjct: 343 YLNVVWGNESSAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKA 402
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LE+AQ++ D E+ RIKARL+EL
Sbjct: 403 ITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQEL 462
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ K+ D KA++LAEMNRKNR ENFKNAS LKPVNT LKAGEAGYDPFSRRWTRS
Sbjct: 463 E-ASRHAKQKDAKALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSR 521
Query: 541 NYYISKFGGDDNSTTVDIEQG 603
NYY + N++ I G
Sbjct: 522 NYYTGEKAAAGNNSVNGIVAG 542
>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 260 bits (665), Expect = 2e-67
Identities = 133/212 (62%), Positives = 163/212 (76%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG++SSAARWQMAM+SDSPP +EF + E+E+ GRMP++Q+VL+KK +QK
Sbjct: 346 YLNVVWGNESSAARWQMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKA 405
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
FVYSAATVKQML EKKS S RP+NIA EKDRLR LE+AQ++ D E+ RIK RL++L
Sbjct: 406 KTFVYSAATVKQMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQL 465
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E Q +K D KAVRLAEMNRKNRAENFKNAS LKPVNT LKAGEAGYDPFSRRWTRS
Sbjct: 466 EASRQAQEK-DAKAVRLAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSR 524
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDGDVNEA 636
NYY++K G D + + ++ V G+ N+A
Sbjct: 525 NYYVAKPPGADAAAVANGDRIGVIASGNGNDA 556
>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
gi|550327599|gb|EEE97240.2| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 664
Score = 259 bits (663), Expect = 4e-67
Identities = 133/224 (59%), Positives = 164/224 (73%), Gaps = 1/224 (0%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN WG+DSSAARWQMAMVSDS P +E+ +W E E+G GR+P++Q++L+KK I+K
Sbjct: 347 YLNVTWGADSSAARWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKS 406
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LE+AQ+R D E+ RI+AR+ EL
Sbjct: 407 NTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILEL 466
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E Q K D KA+RLAEMNRKNR ENF+NAS LKP+NT LKAGEAGYDPFSRRWTRS
Sbjct: 467 EASRQAKVK-DAKALRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSR 525
Query: 541 NYYISK-FGGDDNSTTVDIEQGKVEVDGDVNEAIKMNVVETGEA 669
NYY+S GGDD + E D + + + E+G A
Sbjct: 526 NYYVSNPAGGDDAVAASNSEANDTAAVADSDHVVAGAMSESGVA 569
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Glycine max]
Length = 656
Score = 256 bits (653), Expect = 6e-66
Identities = 128/188 (68%), Positives = 152/188 (80%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG++SSAARWQMAMVSDS PL +EF +W EV++ GRMP++Q+VL+KK IQK
Sbjct: 342 YLNVVWGNESSAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKA 401
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LE+AQ++ D E+ RIK RL EL
Sbjct: 402 ITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLEL 461
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E Q +K D KA++LAEMNRKNR ENFKNAS +KPVNT LKAGEAGYDPFSRRWTRS
Sbjct: 462 EASRQAKQK-DAKALKLAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSR 520
Query: 541 NYYISKFG 564
NYY +K G
Sbjct: 521 NYYAAKPG 528
>ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 679
Score = 255 bits (652), Expect = 8e-66
Identities = 131/215 (60%), Positives = 163/215 (75%), Gaps = 3/215 (1%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LNC+WGS+SSA++WQMAMVS+S P +E+N+W EV++ G MP++ +VL+K+ +QK
Sbjct: 363 YLNCVWGSESSASKWQMAMVSNSAPEEEEYNDWIREVKRSAGYMPSKHDVLEKRETLQKS 422
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSA TVKQML EK+ AS RPVNIAVEKDRLR +LEVA+++ D E+GRIK RL+EL
Sbjct: 423 NTFVYSATTVKQMLQEKR-ASARPVNIAVEKDRLRRQLEVAESKHDMEEVGRIKTRLQEL 481
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E Q +K D KA+RLAEMNRKNR ENFKNAS LKP+NT LKAGEAGYDPFSRRWTRS
Sbjct: 482 EASRQSQEK-DSKAIRLAEMNRKNRFENFKNASGLKPINTNLKAGEAGYDPFSRRWTRSR 540
Query: 541 NYYISKFGGDDNST---TVDIEQGKVEVDGDVNEA 636
NYY+ K GG D + T + G + D EA
Sbjct: 541 NYYVGKPGGGDEAAEDETAEAANGFLGASNDKAEA 575
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 255 bits (651), Expect = 1e-65
Identities = 125/186 (67%), Positives = 154/186 (82%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG+++SAARWQMAMVSDS PL +E+++W EVEK GR+P++++VL+KK I+K
Sbjct: 341 YLNVVWGNENSAARWQMAMVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKT 400
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSA TVKQM+ EKKSAS RP+NIA+EKDRLR +LE+AQ++ D E+ RIKARL++L
Sbjct: 401 NTFVYSAKTVKQMIQEKKSASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQL 460
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E Q K D KAVRLAEMNRKNR +NFKNAS LKPV T LKAGEAGYDPFSRRWTRS
Sbjct: 461 EARQQSQGK-DSKAVRLAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSR 519
Query: 541 NYYISK 558
NYY+SK
Sbjct: 520 NYYVSK 525
>ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
gi|557088572|gb|ESQ29352.1| hypothetical protein
EUTSA_v10023338mg [Eutrema salsugineum]
Length = 644
Score = 254 bits (650), Expect = 1e-65
Identities = 135/225 (60%), Positives = 171/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LNCIWG +SSAARWQMAM+SD PL +E+ +W EVE+ NGRMPT+Q++ +KK I++I
Sbjct: 337 YLNCIWGHESSAARWQMAMISDGYPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRI 396
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
++FVYSA TVKQML EKKSAS+RP+NIA EKDRLR++LEVAQ + D + RIKA++K+L
Sbjct: 397 NSFVYSAETVKQMLQEKKSASVRPMNIAAEKDRLRKELEVAQIKNDEAGVERIKAKIKQL 456
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ K++D+KA++LAEMN+KNRAENFKNAS +K + +LKAGEAGYDPFSRRWTRSS
Sbjct: 457 E-ASREKKEVDKKALKLAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSS 515
Query: 541 NYYIS--KFGGDDNSTTVDIEQGKVEVDGDVNEAIKMNVVETGEA 669
NYY K GGD +T VE +G A N VE EA
Sbjct: 516 NYYNGKRKEGGDTEATAA----AAVETNG---AAAGENGVEATEA 553
>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 662
Score = 254 bits (649), Expect = 2e-65
Identities = 127/205 (61%), Positives = 157/205 (76%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN WG+D+SAARWQMAMVSDS P +E+ +W EVE G GR+P++Q++L+KK I+K
Sbjct: 345 YLNVTWGADTSAARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKS 404
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LE+AQ++ D E+ RI AR++EL
Sbjct: 405 NTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEEL 464
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ K D KA+RLAEMNRKNR ENF+NAS +KPVNT LKAGEAGYDPFSRRWTRS
Sbjct: 465 E-ASRHAKVKDAKAIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSR 523
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEV 615
NYY+SK D+ I + V
Sbjct: 524 NYYVSKPAEADDPVATKISEANETV 548
>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
[Cicer arietinum] gi|502142571|ref|XP_004505023.1|
PREDICTED: RNA polymerase-associated protein RTF1 homolog
isoform X2 [Cicer arietinum]
Length = 658
Score = 253 bits (647), Expect = 3e-65
Identities = 135/227 (59%), Positives = 166/227 (73%), Gaps = 4/227 (1%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG++SSAARWQMAMVSDS PL +EF +W EVE+ GRMPT+Q+VL+KK IQKI
Sbjct: 344 YLNVVWGNESSAARWQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKI 403
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
FVYSA TVKQML EKKS+S RP+N+A EKDRLR ++E+AQ++ D E+ RIK R++EL
Sbjct: 404 ITFVYSADTVKQMLQEKKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQEL 463
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E S+ K D KA++LAEMNRKNR ENFKNAS L+PVN LKAGEAGYDPFSRRWTRS
Sbjct: 464 E-ASRHAKVKDAKALKLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSR 522
Query: 541 NYYISKFG----GDDNSTTVDIEQGKVEVDGDVNEAIKMNVVETGEA 669
NYY++K G N+T V + + G V + VV T A
Sbjct: 523 NYYVAKPGEKAAARKNTTNVLVADAGSNITG-VPVTAESGVVATAAA 568
>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 253 bits (647), Expect = 3e-65
Identities = 127/188 (67%), Positives = 151/188 (80%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG++SSAARWQMAMVSDS P+ +EF +W EV+ GRMP++Q+VL+KK IQK
Sbjct: 342 YLNVVWGNESSAARWQMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKA 401
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
FVYSAATVKQML EKKSAS RP+N+A EKDRLR +LE+AQ++ D E+ RIK RL+EL
Sbjct: 402 ITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQEL 461
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E Q +K D KA++LAEMNRKNR ENFKNAS LKPVN LKAGEAGYDPFSRRWTRS
Sbjct: 462 EASRQAKQK-DAKALKLAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSR 520
Query: 541 NYYISKFG 564
NYY +K G
Sbjct: 521 NYYAAKPG 528
>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
[Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 251 bits (642), Expect = 1e-64
Identities = 123/215 (57%), Positives = 166/215 (77%), Gaps = 1/215 (0%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG+++SAARWQMAM+SD PL +E+ +W EVE+ NGRMPT+Q++ +KK IQ+I
Sbjct: 335 YLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRI 394
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
++FVYSA TVKQML EKKSAS+RP+N+A EKDRLR++LE+AQ++ D + RIK ++K+L
Sbjct: 395 NSFVYSAETVKQMLQEKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQL 454
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
+ S+ K +D+KA++LAEMN+KNRAENFKNAS +K ++ +LKAGEAGYDPFSRRWTRSS
Sbjct: 455 D-ASRNKKGVDKKALKLAEMNKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSS 513
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDG-DVNEAIK 642
NYY K G D VE +G DV ++
Sbjct: 514 NYYNGKNKGKDGEENETAVAAAVETNGADVGAGVE 548
>ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
gi|241942942|gb|EES16087.1| hypothetical protein
SORBIDRAFT_08g017010 [Sorghum bicolor]
Length = 656
Score = 251 bits (641), Expect = 1e-64
Identities = 134/223 (60%), Positives = 161/223 (72%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WGS++ AARWQM VSDSPP +EF EW E EK R+PTRQEVL+KK IQK
Sbjct: 345 YLNVVWGSEADAARWQMTQVSDSPPNEEEFKEWLQEAEKNGARIPTRQEVLEKKESIQKA 404
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
NFVYSA TV+QML E KSA RP+N+A EKDRLR +LE+A +RR+ E RI+A+LK L
Sbjct: 405 YNFVYSAVTVQQMLKE-KSAVRRPINVAAEKDRLRSELEMALSRRNEAEAERIRAKLKNL 463
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
+N Q K D+KA +L MNRKNRA+NFKNAS +KPVNT+LKAGEAGYDPFSRRWTRS
Sbjct: 464 QNRPQQVSK-DDKAAKLEAMNRKNRADNFKNASEMKPVNTSLKAGEAGYDPFSRRWTRSR 522
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDGDVNEAIKMNVVETGEA 669
NYY SK GGD+ T + V +NE IK + +TG A
Sbjct: 523 NYYASKPGGDNAEETANGSSSDVV---PINEDIK-SKAQTGTA 561
>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
[Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform 2 [Solanum lycopersicum]
Length = 645
Score = 249 bits (636), Expect = 5e-64
Identities = 122/183 (66%), Positives = 153/183 (83%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG+++SAARWQMAM+SDSPPL DEF++W EVE+ GRMP++Q+VL+KK IQK
Sbjct: 337 FLNVVWGNENSAARWQMAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKS 396
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
+ FVYSA TVKQML +KKSA+ RP+N+A EKDRLR +EVA+ + D E+ RIKARL+EL
Sbjct: 397 NTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQEL 456
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
E+ S+ ++ D+KA RLAEMNRKNR ENFKNAS L+PVN LKAGEAGYDPFSRRWTRS+
Sbjct: 457 ED-SRKVQEKDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRST 515
Query: 541 NYY 549
NY+
Sbjct: 516 NYF 518
>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
78902-80833 [Arabidopsis thaliana]
gi|332195649|gb|AEE33770.1| Paf1C-like transcription
factor [Arabidopsis thaliana]
Length = 643
Score = 249 bits (635), Expect = 7e-64
Identities = 120/207 (57%), Positives = 161/207 (77%)
Frame = +1
Query: 1 WLNCIWGSDSSAARWQMAMVSDSPPLIDEFNEWKWEVEKGNGRMPTRQEVLDKKAEIQKI 180
+LN +WG+++SAARWQMAM+SD PL +E+ +W EVE+ NGRMPT+Q++ +KK IQ+
Sbjct: 335 YLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRT 394
Query: 181 SNFVYSAATVKQMLLEKKSASLRPVNIAVEKDRLREKLEVAQNRRDTTEMGRIKARLKEL 360
++FVYSA TVKQML EKKSAS+RP+N+A EKDRLR++LE+AQ++ D + RIK+++K+L
Sbjct: 395 NSFVYSAETVKQMLQEKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQL 454
Query: 361 ENMSQGTKKIDEKAVRLAEMNRKNRAENFKNASALKPVNTALKAGEAGYDPFSRRWTRSS 540
+ S+ K +D+KA++LAEMN+KNRAENFKNAS +K + +LKAGEAGYDPFSRRWTRSS
Sbjct: 455 D-ASRNKKGVDKKALKLAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSS 513
Query: 541 NYYISKFGGDDNSTTVDIEQGKVEVDG 621
NYY K G D VE +G
Sbjct: 514 NYYNGKNKGKDGEENEAAVAAAVETNG 540