BLASTX nr result
ID: Zingiber25_contig00003420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00003420
(307 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad... 104 1e-20
ref|NP_001150294.1| protein binding protein [Zea mays] gi|195638... 103 2e-20
ref|XP_004964679.1| PREDICTED: E3 ubiquitin-protein ligase EL5-l... 102 4e-20
ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycin... 102 7e-20
gb|EMT12553.1| Putative RING finger protein [Aegilops tauschii] 101 9e-20
emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera] 100 2e-19
dbj|BAJ89879.1| predicted protein [Hordeum vulgare subsp. vulgar... 100 3e-19
gb|EOY31305.1| RING/U-box superfamily protein [Theobroma cacao] 100 3e-19
dbj|BAC22255.1| RING-H2 zinc finger protein-like [Oryza sativa J... 99 4e-19
ref|NP_001056975.2| Os06g0180800 [Oryza sativa Japonica Group] g... 99 4e-19
gb|EEC80129.1| hypothetical protein OsI_21911 [Oryza sativa Indi... 99 4e-19
ref|XP_006453710.1| hypothetical protein CICLE_v10009499mg [Citr... 99 6e-19
gb|EXB87680.1| Zinc/RING finger protein 3 [Morus notabilis] 98 1e-18
ref|XP_006473942.1| PREDICTED: uncharacterized protein LOC102616... 97 2e-18
gb|ESW10442.1| hypothetical protein PHAVU_009G209800g [Phaseolus... 97 2e-18
gb|AFK38095.1| unknown [Lotus japonicus] 97 2e-18
gb|ACG39333.1| hypothetical protein [Zea mays] 97 2e-18
ref|XP_002309314.1| zinc finger family protein [Populus trichoca... 97 2e-18
ref|XP_006587140.1| PREDICTED: E3 ubiquitin-protein ligase RNF14... 96 6e-18
gb|AFK42549.1| unknown [Lotus japonicus] 95 8e-18
>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
[Vitis vinifera]
Length = 193
Score = 104 bits (259), Expect = 1e-20
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = -1
Query: 229 VQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLP 50
+Q EVF +S + F W KL W+A++ +CA+CLE FKAG+ LVHL C HRFH C++P
Sbjct: 116 LQTEVFGSKRSGSKRFSWGKLSWKASDQVECAICLEGFKAGESLVHLPCAHRFHSRCLMP 175
Query: 49 WLETSSQCPCCRTSVF 2
WLET++ CPCCR +F
Sbjct: 176 WLETNAHCPCCRMGIF 191
>ref|NP_001150294.1| protein binding protein [Zea mays] gi|195638150|gb|ACG38543.1|
protein binding protein [Zea mays]
Length = 208
Score = 103 bits (258), Expect = 2e-20
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = -1
Query: 235 SGVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCV 56
+GVQREV+ RR +WS+ W AAE A+CAVCL++F+AGDVL HL C HRFH C
Sbjct: 121 AGVQREVYSKKGVMRRLMRWSRPRWAAAEQAECAVCLDEFRAGDVLAHLRCGHRFHWACA 180
Query: 55 LPWLETSSQCPCCRTSV 5
LPWLE +S+CP CR +V
Sbjct: 181 LPWLEGTSRCPFCRAAV 197
>ref|XP_004964679.1| PREDICTED: E3 ubiquitin-protein ligase EL5-like, partial [Setaria
italica]
Length = 211
Score = 102 bits (255), Expect = 4e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = -1
Query: 232 GVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVL 53
GVQREV+ RR +WS+ W AAE A+CAVCL+DF+AGDVL HL C HRFH C
Sbjct: 125 GVQREVYSRKGVMRRLMRWSRPRWAAAEQAECAVCLDDFRAGDVLAHLPCGHRFHWACAA 184
Query: 52 PWLETSSQCPCCRTSV 5
PWLE +S+CP CR +V
Sbjct: 185 PWLEGTSRCPFCRAAV 200
>ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycine max]
gi|255632685|gb|ACU16694.1| unknown [Glycine max]
Length = 202
Score = 102 bits (253), Expect = 7e-20
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -1
Query: 220 EVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLPWLE 41
EV+ KS R F W+K W+A+E DCAVCLE F+ G+ L+HL C HRFH C+ PWLE
Sbjct: 128 EVYGSKKSGSRRFSWTKWSWKASEQEDCAVCLESFRVGETLIHLPCAHRFHDRCLKPWLE 187
Query: 40 TSSQCPCCRTSVF 2
+S CPCCRT++F
Sbjct: 188 NNSHCPCCRTTIF 200
>gb|EMT12553.1| Putative RING finger protein [Aegilops tauschii]
Length = 157
Score = 101 bits (252), Expect = 9e-20
Identities = 47/81 (58%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Frame = -1
Query: 235 SGVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCV 56
+GVQREV+ RR +WS+L WEAAE A+CAVCL++F AGDVL HL C HRFH C
Sbjct: 67 TGVQREVYSKKGVMRRLMRWSRLRWEAAEQAECAVCLDEFAAGDVLAHLPCGHRFHWGCA 126
Query: 55 LPWLE----TSSQCPCCRTSV 5
LPWLE S CP CR +V
Sbjct: 127 LPWLEGAAAASHSCPFCRAAV 147
>emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]
Length = 193
Score = 100 bits (249), Expect = 2e-19
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -1
Query: 229 VQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLP 50
+Q EVF +S + F W KL W+A++ +CA+CLE FKAG+ LVHL C HRFH C++P
Sbjct: 116 LQTEVFGSKRSGSKRFSWGKLSWKASDQVECAICLEGFKAGESLVHLPCAHRFHSRCLMP 175
Query: 49 WLETSSQCPCCRTSVF 2
WLET++ CPC R +F
Sbjct: 176 WLETNAHCPCXRMGIF 191
>dbj|BAJ89879.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509645|dbj|BAJ87038.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326530522|dbj|BAJ97687.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531256|dbj|BAK04979.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 212
Score = 100 bits (248), Expect = 3e-19
Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Frame = -1
Query: 235 SGVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCV 56
+GVQREV+ RR +WS+L W+AAE A+CAVCL++F AGDVL HL C HRFH C
Sbjct: 124 TGVQREVYSKKGVMRRLMRWSRLRWDAAEQAECAVCLDEFAAGDVLAHLPCGHRFHWGCA 183
Query: 55 LPWLE----TSSQCPCCRTSV 5
LPWLE S CP CR V
Sbjct: 184 LPWLEGAAAASHSCPFCRAKV 204
>gb|EOY31305.1| RING/U-box superfamily protein [Theobroma cacao]
Length = 191
Score = 99.8 bits (247), Expect = 3e-19
Identities = 38/82 (46%), Positives = 57/82 (69%)
Frame = -1
Query: 250 KNLMDSGVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRF 71
++++ +EVF KS + F W+KL W+A++ +CA+CLE FKAG+ LVHL C HRF
Sbjct: 108 RSMVQGEFHKEVFGPKKSGTKRFSWAKLSWKASDQEECAICLERFKAGETLVHLPCAHRF 167
Query: 70 HCDCVLPWLETSSQCPCCRTSV 5
H C++PW+E ++ CPCCR +
Sbjct: 168 HSRCLIPWVENNAHCPCCRMGI 189
>dbj|BAC22255.1| RING-H2 zinc finger protein-like [Oryza sativa Japonica Group]
gi|55773781|dbj|BAD72564.1| RING-H2 zinc finger
protein-like [Oryza sativa Japonica Group]
Length = 268
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = -1
Query: 232 GVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVL 53
GVQREV+ RR +WS+L W+AAE A+CAVCL++F AGDVL HL C HRFH C L
Sbjct: 177 GVQREVYSRKGVMRRLMRWSRLRWDAAEQAECAVCLDEFAAGDVLAHLPCGHRFHWACAL 236
Query: 52 PWLETSS---QCPCCRTSV 5
PWLE + CP CR +V
Sbjct: 237 PWLEAGAAPRSCPFCRAAV 255
>ref|NP_001056975.2| Os06g0180800 [Oryza sativa Japonica Group]
gi|255676779|dbj|BAF18889.2| Os06g0180800, partial
[Oryza sativa Japonica Group]
Length = 130
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = -1
Query: 232 GVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVL 53
GVQREV+ RR +WS+L W+AAE A+CAVCL++F AGDVL HL C HRFH C L
Sbjct: 39 GVQREVYSRKGVMRRLMRWSRLRWDAAEQAECAVCLDEFAAGDVLAHLPCGHRFHWACAL 98
Query: 52 PWLETSS---QCPCCRTSV 5
PWLE + CP CR +V
Sbjct: 99 PWLEAGAAPRSCPFCRAAV 117
>gb|EEC80129.1| hypothetical protein OsI_21911 [Oryza sativa Indica Group]
Length = 221
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = -1
Query: 232 GVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVL 53
GVQREV+ RR +WS+L W+AAE A+CAVCL++F AGDVL HL C HRFH C L
Sbjct: 130 GVQREVYSRKGVMRRLMRWSRLRWDAAEQAECAVCLDEFAAGDVLAHLPCGHRFHWACAL 189
Query: 52 PWLETSS---QCPCCRTSV 5
PWLE + CP CR +V
Sbjct: 190 PWLEAGAAPRSCPFCRAAV 208
>ref|XP_006453710.1| hypothetical protein CICLE_v10009499mg [Citrus clementina]
gi|567923410|ref|XP_006453711.1| hypothetical protein
CICLE_v10009499mg [Citrus clementina]
gi|557556936|gb|ESR66950.1| hypothetical protein
CICLE_v10009499mg [Citrus clementina]
gi|557556937|gb|ESR66951.1| hypothetical protein
CICLE_v10009499mg [Citrus clementina]
Length = 207
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = -1
Query: 268 EEQLVVKNLMDSGV-QREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVH 92
+E V+ N+ S V +VF KS + F WSKL W+A E +CA+CLE FK GD LVH
Sbjct: 109 KESSVLMNINKSTVLHTQVFGSKKSGSKRFSWSKLSWKACEQEECAICLERFKVGDTLVH 168
Query: 91 LLCDHRFHCDCVLPWLETSS-QCPCCRTSV 5
L C HRFH C+LPWL T++ CPCCR +
Sbjct: 169 LPCAHRFHARCLLPWLATNAHNCPCCRMQI 198
>gb|EXB87680.1| Zinc/RING finger protein 3 [Morus notabilis]
Length = 191
Score = 98.2 bits (243), Expect = 1e-18
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = -1
Query: 229 VQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLP 50
+Q+EV+ KS R F W+KL W+A++ CA+CLE F+AG+ LVHL C HRFH C++P
Sbjct: 111 LQKEVYGTRKSGSRRFSWAKLSWKASDQEVCAICLERFRAGENLVHLPCAHRFHHGCLVP 170
Query: 49 WLETSSQCPCCRTSV 5
WLE +S CPCCR +
Sbjct: 171 WLENNSHCPCCRMGI 185
>ref|XP_006473942.1| PREDICTED: uncharacterized protein LOC102616965 [Citrus sinensis]
Length = 207
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = -1
Query: 268 EEQLVVKNLMDSGV-QREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVH 92
+E V+ N+ S V +VF KS + F WSKL W+A E +CA+CLE FK GD LVH
Sbjct: 109 KESSVLMNINKSTVLHTQVFGSKKSGSKRFSWSKLSWKAWEQEECAICLERFKVGDTLVH 168
Query: 91 LLCDHRFHCDCVLPWLETSS-QCPCCRTSV 5
L C HRFH C+LPWL T++ CPCCR +
Sbjct: 169 LPCAHRFHARCLLPWLGTNAHNCPCCRMQI 198
>gb|ESW10442.1| hypothetical protein PHAVU_009G209800g [Phaseolus vulgaris]
Length = 188
Score = 97.4 bits (241), Expect = 2e-18
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = -1
Query: 220 EVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLPWLE 41
EV+ KS R F W++ W+A+E DCAVCLE F+ G+ L+HL C H+FH C+ PWLE
Sbjct: 114 EVYGSKKSGARKFSWTRWSWKASEQEDCAVCLESFRVGETLIHLPCAHKFHDRCLKPWLE 173
Query: 40 TSSQCPCCRTSV 5
+S CPCCRT++
Sbjct: 174 NNSHCPCCRTTI 185
>gb|AFK38095.1| unknown [Lotus japonicus]
Length = 183
Score = 97.4 bits (241), Expect = 2e-18
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = -1
Query: 220 EVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLPWLE 41
E + KS R F WSKL W+A+E DCAVCLE F+ G+ L+ L C HRFH C+ PWLE
Sbjct: 109 ETYGSRKSGSRRFSWSKLSWKASEQEDCAVCLETFRNGETLIPLPCAHRFHSRCLKPWLE 168
Query: 40 TSSQCPCCRTSV 5
+S CPCCRT++
Sbjct: 169 NNSHCPCCRTTI 180
>gb|ACG39333.1| hypothetical protein [Zea mays]
Length = 129
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = -1
Query: 235 SGVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCV 56
+GVQREV+ RR +WS+ W AAE A+CAVCL++F+AGDVL HL C HRFH C
Sbjct: 2 AGVQREVYSKKGVMRRLMRWSRPRWAAAEQAECAVCLDEFRAGDVLAHLRCGHRFHWACA 61
Query: 55 LPWLETSSQCP 23
LPWLE +S+CP
Sbjct: 62 LPWLEGTSRCP 72
>ref|XP_002309314.1| zinc finger family protein [Populus trichocarpa]
gi|222855290|gb|EEE92837.1| zinc finger family protein
[Populus trichocarpa]
Length = 202
Score = 97.1 bits (240), Expect = 2e-18
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = -1
Query: 250 KNLMDSGVQREVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRF 71
++++ +Q EV+ +S + +KW+KL W+AA+ +C +CL+ FK+G+ LVHL C HR+
Sbjct: 116 RSMVPGELQMEVYGPKRSGSKRYKWAKLSWKAADQDECTICLDRFKSGETLVHLPCAHRY 175
Query: 70 HCDCVLPWLETSSQCPCCRTSV 5
H C++PWLE + QCPCCR +
Sbjct: 176 HPKCLVPWLENNGQCPCCRMEI 197
>ref|XP_006587140.1| PREDICTED: E3 ubiquitin-protein ligase RNF149-like [Glycine max]
Length = 155
Score = 95.5 bits (236), Expect = 6e-18
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = -1
Query: 220 EVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLPWLE 41
E + KS R F W+K W+A+E +CAVCLE F+ G+ L+HL C HRFH C+ PWLE
Sbjct: 81 EEYGSKKSGSRRFSWTKWSWKASEQEECAVCLESFRVGETLIHLPCAHRFHDRCLKPWLE 140
Query: 40 TSSQCPCCRTSV 5
+S CPCCRT++
Sbjct: 141 NNSYCPCCRTTI 152
>gb|AFK42549.1| unknown [Lotus japonicus]
Length = 183
Score = 95.1 bits (235), Expect = 8e-18
Identities = 39/72 (54%), Positives = 49/72 (68%)
Frame = -1
Query: 220 EVFCGTKSRRRWFKWSKLGWEAAEPADCAVCLEDFKAGDVLVHLLCDHRFHCDCVLPWLE 41
E + KS R F WSKL W+A+E DCAVCLE + G+ L+ L C HRFH C+ PWLE
Sbjct: 109 ETYGSRKSGSRRFSWSKLSWKASEQEDCAVCLETIRNGETLIPLPCAHRFHSRCLKPWLE 168
Query: 40 TSSQCPCCRTSV 5
+S CPCCRT++
Sbjct: 169 NNSHCPCCRTTI 180