BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00003352
         (1655 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-105
gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]    387   e-105
gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]    384   e-104
gb|EEC76135.1| hypothetical protein OsI_13421 [Oryza sativa Indi...   384   e-104
ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079...   383   e-103
ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] g...   383   e-103
ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [S...   382   e-103
ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat...   379   e-102
ref|XP_003559455.1| PREDICTED: putative pentatricopeptide repeat...   379   e-102
ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containi...   348   4e-93
emb|CBI35029.3| unnamed protein product [Vitis vinifera]              345   3e-92
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat...   345   3e-92
gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [...   344   7e-92
ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat...   326   2e-86
gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily p...   322   2e-85
ref|NP_189505.2| putative pentatricopeptide repeat-containing pr...   321   5e-85
ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat...   321   5e-85
ref|XP_002877120.1| pentatricopeptide repeat-containing protein ...   321   5e-85
ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutr...   321   7e-85
gb|EEE59880.1| hypothetical protein OsJ_12480 [Oryza sativa Japo...   318   4e-84

>ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
            [Oryza brachyantha]
          Length = 493

 Score =  389 bits (999), Expect = e-105
 Identities = 202/384 (52%), Positives = 259/384 (67%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAIDDAPKLFD 1339
            DH SFPF L+A AA  +   G Q+HALVV+NGL  +D YV TALL+L++   DDA ++FD
Sbjct: 100  DHLSFPFALSA-AAGAAPPPGDQLHALVVRNGLFPSDHYVTTALLQLHAPRPDDARRVFD 158

Query: 1338 EIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQ 1159
            E+P  +A+HYD+++  + R G+ +E            + PD   +TTA+ ACA AGALE 
Sbjct: 159  ELPRREAIHYDLVIGAYARAGMAAEGLGGFRAMFADGVLPDAVVLTTAIAACAQAGALEC 218

Query: 1158 GVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAY 979
            G  +H+Y+         D F+GSALVSMYAKCGC++ AV VFD +P RN+++W TM+GA+
Sbjct: 219  GEWMHRYVERTAPGLLGDAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAF 278

Query: 978  AMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAP 799
            A+HG  E+A+AC+ RM   D +RPD                VEDGL LL +M  +Y VAP
Sbjct: 279  AVHGMAEEAVACLDRMAREDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVAP 338

Query: 798  EHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAEL 619
             HEHYSC VDMLCRVGRLE+A           L SVWGS+LTGCRI  NVELAE A  EL
Sbjct: 339  GHEHYSCTVDMLCRVGRLEDAVALIKTMPMAPLTSVWGSVLTGCRIYANVELAEVAAGEL 398

Query: 618  QRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASSF 439
             +     G DEGVYVQLSNIYL+ANRK++A +VRKL+GSRG +K PA SA+ V+G+ SSF
Sbjct: 399  AKL--GAGADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIRKVPAYSAVEVDGEVSSF 456

Query: 438  VAGDQAHPRRTEIWTMLELLTDHI 367
            VA DQAHP+R EIW +L LL+D +
Sbjct: 457  VADDQAHPQRVEIWGVLGLLSDQM 480


>gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]
          Length = 426

 Score =  387 bits (994), Expect = e-105
 Identities = 201/385 (52%), Positives = 258/385 (67%), Gaps = 1/385 (0%)
 Frame = -3

Query: 1518 DHHSFPFVL-AACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAIDDAPKLF 1342
            DH SFPF L AA AA  +   G Q+HAL+VKN L  +D YV TALL+L++   DDA ++F
Sbjct: 12   DHLSFPFALSAAAAAPVAPPPGPQLHALLVKNALFPSDHYVTTALLQLHAPRPDDARRVF 71

Query: 1341 DEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALE 1162
            DE+P  +A+HYD+++  + R G+ +E            + PD   +TTA+ ACA +GALE
Sbjct: 72   DELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFVDGVAPDAVVLTTAVAACAQSGALE 131

Query: 1161 QGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGA 982
             G  +H+Y+ S       D F+GSALVSMYAKCGC+++AV VF+ +P RN ++W TM+GA
Sbjct: 132  CGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWGTMVGA 191

Query: 981  YAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVA 802
            +A+HG   +A+AC+ RM   D +RPD                VEDGL LL +M  +Y V 
Sbjct: 192  FAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVT 251

Query: 801  PEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAE 622
            P HEHYSC VDMLCRVGRLE+A           LASVWGSLL GCR+ GNV+LAE A  E
Sbjct: 252  PGHEHYSCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMYGNVKLAEVAAKE 311

Query: 621  LQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASS 442
            L++     G DEGVYVQLSNIYL+ANRK++A +VRKL+GSRG KK PA SA+ V+G+ SS
Sbjct: 312  LEKL--GVGADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGLKKVPAYSAVEVDGELSS 369

Query: 441  FVAGDQAHPRRTEIWTMLELLTDHI 367
            FVA DQAHPRR EIW +L LL D +
Sbjct: 370  FVADDQAHPRRFEIWDLLGLLADQM 394


>gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]
          Length = 425

 Score =  384 bits (985), Expect = e-104
 Identities = 197/385 (51%), Positives = 258/385 (67%), Gaps = 1/385 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACA-ANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAIDDAPKLF 1342
            DH SFPF L+A A A  +   G Q+HAL++KN L  +D YV TALL+L++   DDA ++F
Sbjct: 12   DHLSFPFALSAAAVAPVAPPPGPQLHALLLKNALFPSDHYVTTALLQLHAPRPDDARRVF 71

Query: 1341 DEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALE 1162
            DE+P  +A+HYD+++  + R G+ +E            + PD   +TTA+ ACA +GALE
Sbjct: 72   DELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFADGVAPDAVVLTTAIAACAQSGALE 131

Query: 1161 QGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGA 982
             G  +H+Y+ S       D F+GSALVSMYAKCGC+++AV VF+ +P RN ++W TM+GA
Sbjct: 132  CGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWGTMVGA 191

Query: 981  YAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVA 802
            +A+HG   +A+AC+ RM   D +RPD                VEDGL LL +M  +Y V 
Sbjct: 192  FAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVT 251

Query: 801  PEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAE 622
            P HEH+SC VDMLCRVGRLE+A           LASVWGSLL GCR+ GNVELAE A  E
Sbjct: 252  PGHEHFSCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMYGNVELAEVAAKE 311

Query: 621  LQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASS 442
            L++     G DEGVYVQLSNIYL+ANRK++A +VRKL+G+RG KK PA SA+ ++G+ SS
Sbjct: 312  LEKL--GMGADEGVYVQLSNIYLDANRKDDARRVRKLIGNRGLKKVPAYSAVEIDGELSS 369

Query: 441  FVAGDQAHPRRTEIWTMLELLTDHI 367
            FVA DQAHPRR EIW +L LL D +
Sbjct: 370  FVADDQAHPRRFEIWDLLGLLADQM 394


>gb|EEC76135.1| hypothetical protein OsI_13421 [Oryza sativa Indica Group]
          Length = 406

 Score =  384 bits (985), Expect = e-104
 Identities = 199/384 (51%), Positives = 257/384 (66%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAIDDAPKLFD 1339
            DH SFPF L+A AA  S   G Q+HAL+VKNGL  +D YV TALL+L++   DDA ++FD
Sbjct: 12   DHLSFPFALSAAAAV-SPSPGTQLHALLVKNGLFPSDHYVATALLQLHAARPDDARRVFD 70

Query: 1338 EIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQ 1159
            E+P  +A+HYD+++  + R G+ +E            + PD   +TTA+TACA AGALE 
Sbjct: 71   ELPRREAIHYDLVIGAYARAGMAAEGLGVFRAMFMDGVAPDAVVLTTAITACAQAGALEC 130

Query: 1158 GVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAY 979
            G  +H+Y+         D F+GSALVSMYAKCGC++ AV VFD +P RN+++W TM+GA+
Sbjct: 131  GEWVHRYVERSAPGLLGDAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAF 190

Query: 978  AMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAP 799
            A+HG  E+A++C+ RM   D +RPD                V+DGL LL +M  +Y VAP
Sbjct: 191  AVHGRAEEAVSCLDRMAREDGVRPDGVAVLGALSACAHAGKVDDGLRLLREMSRRYGVAP 250

Query: 798  EHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAEL 619
             HEHY+C VDMLCRV RLE+A           LASVWGS+LTGCR   NVELAE A AEL
Sbjct: 251  GHEHYACTVDMLCRVDRLEDAVALIETMPMAPLASVWGSVLTGCRTYANVELAEVAAAEL 310

Query: 618  QRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASSF 439
             +     G D+GVYVQLSNIYL+ANRK++A +VRKL+GSRG +K PA S + V+G  SSF
Sbjct: 311  GKL--GAGPDKGVYVQLSNIYLDANRKDDARRVRKLIGSRGIRKVPAYSEVEVDGVVSSF 368

Query: 438  VAGDQAHPRRTEIWTMLELLTDHI 367
            VA DQAHP+R EIW +L LL D +
Sbjct: 369  VADDQAHPQRVEIWEVLRLLADQM 392


>ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079|gb|ACN27623.1| unknown
            [Zea mays] gi|413942312|gb|AFW74961.1| hypothetical
            protein ZEAMMB73_025514 [Zea mays]
          Length = 506

 Score =  383 bits (984), Expect = e-103
 Identities = 204/394 (51%), Positives = 253/394 (64%), Gaps = 10/394 (2%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAA---------NGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHA 1366
            DH SFPF L+A AA               G Q+HAL+V+N L  AD YV TALL+LYS  
Sbjct: 96   DHLSFPFALSAAAALDANPSSSAAAGTAPGPQLHALLVRNALFPADHYVTTALLQLYSPR 155

Query: 1365 IDDAPKLFDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXL-EPDNFAVTTALT 1189
             D A ++FDE+P  +A+HYD+L+  + R G P+E               PD   +TTA+ 
Sbjct: 156  PDLARRVFDELPRREAIHYDLLIGSYARAGAPAEGLSVFRTMLDDDGVTPDAVVLTTAVA 215

Query: 1188 ACAHAGALEQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNN 1009
            ACA AGAL+ G  +H+Y+         D FLGSAL+ MYAKCGC+++AV VFD +P RN 
Sbjct: 216  ACAQAGALDLGAWVHRYVERAAPGLLADAFLGSALIGMYAKCGCLEEAVRVFDGMPERNA 275

Query: 1008 HMWATMIGAYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLG 829
            ++WATM+GA A+HG   +A+AC+ RM   D +RPD                VE+GL LLG
Sbjct: 276  YVWATMVGALAVHGMAAEAVACLERMAREDGVRPDGVAVLGALSACAHAGDVEEGLRLLG 335

Query: 828  DMEAKYEVAPEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNV 649
            +M  +Y V P HEHYSCAVDMLCRVGRLE+A           LASVWGS+L GCR  GNV
Sbjct: 336  EMRPRYGVVPGHEHYSCAVDMLCRVGRLEDAVGLVKIMPMAPLASVWGSVLAGCRSHGNV 395

Query: 648  ELAETAVAELQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSA 469
            ELAE A  EL+R   S   DEGVYVQLSNIYL+ANRK++A +VRKL+G RG KK PA SA
Sbjct: 396  ELAEVAARELERLGGS--ADEGVYVQLSNIYLDANRKDDARRVRKLIGGRGIKKLPAYSA 453

Query: 468  IHVEGKASSFVAGDQAHPRRTEIWTMLELLTDHI 367
            + V+G+ SSFVA DQAHPRR EIW +L LL D +
Sbjct: 454  LEVDGEVSSFVADDQAHPRRFEIWEVLRLLADQM 487


>ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] gi|22773237|gb|AAN06843.1|
            Hypothetical protein [Oryza sativa Japonica Group]
            gi|108706287|gb|ABF94082.1| pentatricopeptide, putative,
            expressed [Oryza sativa Japonica Group]
            gi|125584986|gb|EAZ25650.1| hypothetical protein
            OsJ_09480 [Oryza sativa Japonica Group]
            gi|255674223|dbj|BAH92004.1| Os03g0158900 [Oryza sativa
            Japonica Group]
          Length = 490

 Score =  383 bits (984), Expect = e-103
 Identities = 202/386 (52%), Positives = 257/386 (66%), Gaps = 2/386 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAI--DDAPKL 1345
            DH SFPF L+A AA  S   GAQ+HAL+VKNG   +D YV TALL+L  HA   DDA ++
Sbjct: 96   DHLSFPFALSA-AATVSPSPGAQLHALLVKNGHFPSDHYVTTALLQLQLHAARPDDARRV 154

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGAL 1165
            FDE+P  +A+HYD+++  + R G+  E            + PD   +TTA+ ACA AGAL
Sbjct: 155  FDELPRREAIHYDLVIGAYTRTGMAGEGLGVFRAMFVDGVAPDAVVLTTAIAACAQAGAL 214

Query: 1164 EQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIG 985
            E G  +H+Y+ +       D F+GSALVSMYAKCGC++ AV VFD +P RN+++W TM+G
Sbjct: 215  ECGEWVHRYVEASAPWLLGDAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVG 274

Query: 984  AYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEV 805
            A+A+HG  E+A++C+ RM   D +RPD                VEDGL LL +M  +Y V
Sbjct: 275  AFAVHGMAEEAVSCLDRMAREDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGV 334

Query: 804  APEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVA 625
            AP HEHY+C VDMLCRVGRLE+A           LASVWGS+LTGCR   NVELAE A A
Sbjct: 335  APGHEHYACTVDMLCRVGRLEDAVALIETMPMAPLASVWGSVLTGCRTYANVELAEVAAA 394

Query: 624  ELQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKAS 445
            EL +     G DEGVYVQLSNIYL++NRK++A +VRKL+GSRG +K PA SA+ V+G   
Sbjct: 395  ELGKL----GADEGVYVQLSNIYLDSNRKDDARRVRKLIGSRGIRKVPAYSAVEVDGVVR 450

Query: 444  SFVAGDQAHPRRTEIWTMLELLTDHI 367
            SFVA DQAHP+R EIW +L LL D +
Sbjct: 451  SFVADDQAHPQRVEIWEVLGLLADQM 476


>ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [Sorghum bicolor]
            gi|190688727|gb|ACE86390.1| pentatricopeptide (PPR)
            repeat-containing protein [Sorghum bicolor]
            gi|241944436|gb|EES17581.1| hypothetical protein
            SORBIDRAFT_09g001360 [Sorghum bicolor]
          Length = 517

 Score =  382 bits (980), Expect = e-103
 Identities = 205/394 (52%), Positives = 253/394 (64%), Gaps = 10/394 (2%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAA-------NGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAID 1360
            DH SFPF L+A AA       + S   G Q+HAL+V+N L  AD YV TALL+LYS   D
Sbjct: 98   DHLSFPFALSAAAALDATTPSSSSYSTGPQLHALLVRNALFPADHYVTTALLQLYSPHPD 157

Query: 1359 DAPKLFDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLE---PDNFAVTTALT 1189
             A ++FDE+P  +A+HYD+L+  + R G P+E                 PD   +TTA+ 
Sbjct: 158  LARRVFDELPRREAIHYDLLIGSYARAGAPTEGLAVFRAMFDDDDGVVVPDAVVLTTAVA 217

Query: 1188 ACAHAGALEQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNN 1009
            ACA AGAL+ G  +H+Y+         D FLGSALV MYAKCGC+ DAV VFD +P RN 
Sbjct: 218  ACAQAGALDHGAWVHRYVERTAPGLLADAFLGSALVGMYAKCGCLDDAVRVFDGMPERNA 277

Query: 1008 HMWATMIGAYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLG 829
            ++W TM+GA A+HG   +A+AC+ RM   D +RPD                VE+GL LL 
Sbjct: 278  YVWGTMVGALAVHGMAAEAVACLDRMAVEDGVRPDGVAVLGALSACAHAGNVEEGLCLLR 337

Query: 828  DMEAKYEVAPEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNV 649
            +M  +Y V P HEHYSCAVDMLCRVGRLE+A           LASVWGS+L GCR  GNV
Sbjct: 338  EMRPRYGVVPGHEHYSCAVDMLCRVGRLEDAVGLVETMPMAPLASVWGSVLAGCRSYGNV 397

Query: 648  ELAETAVAELQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSA 469
            ELAE AV EL++       DEGVYVQLSNIYL+ANRK++A +VRKL+GSRG KK PA SA
Sbjct: 398  ELAEVAVRELEKL--GGTADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIKKVPAYSA 455

Query: 468  IHVEGKASSFVAGDQAHPRRTEIWTMLELLTDHI 367
            + V+G+ SSFVA DQAHPRR EIW +L LL D +
Sbjct: 456  VEVDGEVSSFVADDQAHPRRFEIWEVLRLLADQM 489


>ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Setaria italica]
          Length = 495

 Score =  379 bits (974), Expect = e-102
 Identities = 197/397 (49%), Positives = 256/397 (64%), Gaps = 6/397 (1%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAA------NGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAIDD 1357
            DH SFPF L+A AA      +     GAQ+HAL+V+N L   D YV TALL+LY+   + 
Sbjct: 94   DHLSFPFALSAAAAVDAPDSSSDAGAGAQLHALLVRNALFPVDHYVTTALLQLYAPRPEL 153

Query: 1356 APKLFDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAH 1177
            A ++FDE+P  +A+HYD+++  + R G+P+E            + PD   +TTA+ ACA 
Sbjct: 154  ARRVFDELPRREAIHYDLVIGAYARAGMPAEGLAVFRAMFEDGVAPDAVVLTTAVAACAQ 213

Query: 1176 AGALEQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWA 997
            AGAL+ G  +H+Y+         D F+GSALVSMYAKCGC+ +AV VFD +P RN ++W 
Sbjct: 214  AGALDCGAWVHRYVERAAPGLLGDAFVGSALVSMYAKCGCLDEAVRVFDGMPERNEYVWG 273

Query: 996  TMIGAYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEA 817
            TM+GA+A+HG   +A+AC+ RM   D +RPD                V+DGL LL +M  
Sbjct: 274  TMVGAFAVHGMAAEAVACLERMAREDGVRPDGVAVLGALSACAHAGKVDDGLRLLREMRG 333

Query: 816  KYEVAPEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAE 637
            +Y VAP HEHYSC VDMLCRVGRLE+A           L SVWGS+L GCR  GNVELAE
Sbjct: 334  RYGVAPGHEHYSCTVDMLCRVGRLEDAVGLIGTMPMAPLESVWGSVLAGCRSYGNVELAE 393

Query: 636  TAVAELQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVE 457
             A  EL++       DEGVYVQLSNIYL+ANRK++A +VRKL+GSRG KK PA SA+ V+
Sbjct: 394  VAARELEKL--GGTADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIKKAPAYSAVEVD 451

Query: 456  GKASSFVAGDQAHPRRTEIWTMLELLTDHICSCTEDD 346
            G+ SSFVA DQAHPR  EIW +L LL D +    +++
Sbjct: 452  GEVSSFVADDQAHPRCFEIWEVLRLLVDQMAQKPDEE 488


>ref|XP_003559455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Brachypodium distachyon]
          Length = 493

 Score =  379 bits (974), Expect = e-102
 Identities = 197/385 (51%), Positives = 254/385 (65%), Gaps = 1/385 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANG-SLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAIDDAPKLF 1342
            DH SFPF L+A AA+  S   G Q+HAL+VKN L  +D YV TALL+L++   ++A ++F
Sbjct: 94   DHLSFPFALSAAAASAVSPPPGPQLHALLVKNALFPSDHYVTTALLQLHAPRPEEARRVF 153

Query: 1341 DEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALE 1162
            DE+P  +A+HYD+++  + R G+ SE            + PD   +TTA+ ACA +G LE
Sbjct: 154  DELPRREAIHYDLVIGAYARAGMASEGLALFRAMFLDGVAPDAVVLTTAIAACAQSGMLE 213

Query: 1161 QGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGA 982
             G  +H+Y+         D F+GSALVSMYAKCGC+++AV+VF+ +P RN ++W TM+GA
Sbjct: 214  CGEWVHRYVERSAPGLLADAFVGSALVSMYAKCGCLQEAVKVFEGMPERNEYVWGTMVGA 273

Query: 981  YAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVA 802
            +A+HG   +A+AC+ RM + D +RPD                VEDGL LL  M   Y V 
Sbjct: 274  FAVHGMAREAVACLERMAKEDGVRPDGVAVLGALSACAHAGKVEDGLSLLKGMRQTYGVP 333

Query: 801  PEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAE 622
            P HEHYSC VDMLCRVGRLE+A           LASVWGSLL GCR+ GNVELAE A  E
Sbjct: 334  PGHEHYSCTVDMLCRVGRLEDAVRLISTMPMTPLASVWGSLLAGCRMYGNVELAEVAATE 393

Query: 621  LQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASS 442
            L +     G DEGVYVQLSNIYL+ANRK++A ++RKL+GSRG KK  A SA+ V+G+ SS
Sbjct: 394  LGKL--GAGADEGVYVQLSNIYLDANRKDDARRIRKLIGSRGLKKVAACSAVEVDGEVSS 451

Query: 441  FVAGDQAHPRRTEIWTMLELLTDHI 367
            FVA DQ HPRR EIW +L LL D I
Sbjct: 452  FVADDQVHPRRFEIWDVLGLLADQI 476


>ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
            [Fragaria vesca subsp. vesca]
          Length = 501

 Score =  348 bits (893), Expect = 4e-93
 Identities = 187/431 (43%), Positives = 257/431 (59%), Gaps = 5/431 (1%)
 Frame = -3

Query: 1653 SLLFHHAPYPPSTFAHNALIXXXXXXXXXXXXXXXXXXXXXXXXA--DHHSFPFVLAACA 1480
            SL+FH  P  P+ + +N LI                           D+ +F F +  C 
Sbjct: 66   SLIFHQVP-APNAYMYNTLIRAHSASSDPHLAMYYFQLMSKQIDLEPDNFTFHFAILGCV 124

Query: 1479 ANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHA--IDDAPKLFDEIPNPDAVHYD 1306
              G +  G Q+H LVVKNGL +AD +VQTA++RLY     + DA K+FDEIP  D V ++
Sbjct: 125  NCGWIGPGRQMHCLVVKNGLVAADAHVQTAVVRLYVECGVLGDAHKVFDEIPERDMVQWN 184

Query: 1305 VLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQGVRIHKYLASK 1126
            V+MN +++RG+ SEA            EPD F V T L ACAH GAL QG  IH+Y+  +
Sbjct: 185  VIMNGYVKRGLASEALRVFQDMLVRGFEPDGFCVATGLAACAHLGALWQGKWIHEYVRKR 244

Query: 1125 DASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAYAMHGFPEKAIA 946
            +   + D F+G+ALV MYAKCGCI  AVE F+ +  RN   W+ MIGAY +HG+  +AI+
Sbjct: 245  EGLNS-DVFIGTALVDMYAKCGCIDLAVEAFEGMGKRNVVSWSAMIGAYGVHGYATEAIS 303

Query: 945  CVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAPEHEHYSCAVDM 766
            C+ RMQ  D ++PD                +E G  LL +M+AKY + P+HEHYSC +D+
Sbjct: 304  CLERMQVDDGVKPDGVVLLGVLTACNHGGLLEKGKALLDNMKAKYGIVPKHEHYSCVIDL 363

Query: 765  LCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAELQRFTESD-GDD 589
            LC+ GRL +A           LASVWG+LL+GCRI  NV+LAE AV +L +    D G++
Sbjct: 364  LCKAGRLSDAFELIRRMPMKPLASVWGALLSGCRIHNNVDLAEIAVEQLLQVANDDRGEE 423

Query: 588  EGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASSFVAGDQAHPRR 409
             G YVQLSNIYL A R E+A ++RK++G +G KKTP  S + V+GK + FV+GD +H   
Sbjct: 424  VGAYVQLSNIYLGAQRSEDALRIRKMIGEKGIKKTPGCSMLEVDGKVNEFVSGDVSHSHC 483

Query: 408  TEIWTMLELLT 376
             +I TML+L++
Sbjct: 484  VQICTMLDLIS 494


>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
          Length = 1596

 Score =  345 bits (886), Expect = 3e-92
 Identities = 177/384 (46%), Positives = 246/384 (64%), Gaps = 3/384 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSH--AIDDAPKL 1345
            D H+FPF+++AC  +  ++ G Q+H  V+KNG++S+D +VQTAL+R Y+   A+ DA KL
Sbjct: 104  DQHTFPFIISACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKL 163

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGAL 1165
            FDEIPN D V ++VL+N ++RRG+  EA           +EPD F +TTAL  CA  GAL
Sbjct: 164  FDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGAL 223

Query: 1164 EQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIG 985
            +QG  IH+Y+  +    A D F+G+ALV MYAKCGCI  +VEVF+ +  RN   W+ MIG
Sbjct: 224  QQGKWIHEYVTKRKWLEA-DVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIG 282

Query: 984  AYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEV 805
             +A+HG   KA+ C+ RMQ  D LRPD                 E+G  LL +MEA+Y +
Sbjct: 283  GFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGI 342

Query: 804  APEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVA 625
             P+HEHYSC VD+LCR G+L+EA            A+VWG+LL+GCR   NV+LAE A  
Sbjct: 343  LPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAAR 402

Query: 624  ELQRFTESDG-DDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKA 448
            EL      DG +++G YVQLSNIYL A + E+AC++R+++G +  K  P  S I VEG+ 
Sbjct: 403  ELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEV 462

Query: 447  SSFVAGDQAHPRRTEIWTMLELLT 376
            + FV+GD +HP   +I  ML+L++
Sbjct: 463  NQFVSGDISHPCLAQIHEMLDLVS 486


>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Vitis vinifera]
          Length = 511

 Score =  345 bits (886), Expect = 3e-92
 Identities = 177/384 (46%), Positives = 246/384 (64%), Gaps = 3/384 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSH--AIDDAPKL 1345
            D H+FPF+++AC  +  ++ G Q+H  V+KNG++S+D +VQTAL+R Y+   A+ DA KL
Sbjct: 104  DQHTFPFIISACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKL 163

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGAL 1165
            FDEIPN D V ++VL+N ++RRG+  EA           +EPD F +TTAL  CA  GAL
Sbjct: 164  FDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGAL 223

Query: 1164 EQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIG 985
            +QG  IH+Y+  +    A D F+G+ALV MYAKCGCI  +VEVF+ +  RN   W+ MIG
Sbjct: 224  QQGKWIHEYVTKRKWLEA-DVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIG 282

Query: 984  AYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEV 805
             +A+HG   KA+ C+ RMQ  D LRPD                 E+G  LL +MEA+Y +
Sbjct: 283  GFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGI 342

Query: 804  APEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVA 625
             P+HEHYSC VD+LCR G+L+EA            A+VWG+LL+GCR   NV+LAE A  
Sbjct: 343  LPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAAR 402

Query: 624  ELQRFTESDG-DDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKA 448
            EL      DG +++G YVQLSNIYL A + E+AC++R+++G +  K  P  S I VEG+ 
Sbjct: 403  ELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEV 462

Query: 447  SSFVAGDQAHPRRTEIWTMLELLT 376
            + FV+GD +HP   +I  ML+L++
Sbjct: 463  NQFVSGDISHPCLAQIHEMLDLVS 486


>gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
          Length = 541

 Score =  344 bits (882), Expect = 7e-92
 Identities = 185/383 (48%), Positives = 237/383 (61%), Gaps = 3/383 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHA--IDDAPKL 1345
            D+++F FV+ ACA    LV G Q+H  VVKNGL   D +VQTAL+RLY+    +DD+ K+
Sbjct: 97   DNYTFNFVILACANCSWLVSGRQIHNWVVKNGLFLVDAHVQTALVRLYAECKVLDDSKKV 156

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGAL 1165
            FDEIP  D + ++VLMN ++R G+ SEA            EPDNF V T L ACAH GAL
Sbjct: 157  FDEIPERDVIQWNVLMNGYVRCGLASEALKVFRDMLVTGFEPDNFCVATGLAACAHLGAL 216

Query: 1164 EQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIG 985
             QG  I +Y+  K      D F+G+ALV MYAKCGCI  AVE F+ +P RN   WA MIG
Sbjct: 217  RQGKWIDEYV-KKRTGLKSDVFIGTALVDMYAKCGCIDLAVEAFEGMPKRNVVSWAAMIG 275

Query: 984  AYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEV 805
             +A HG    AI  + RMQ  D LRPD                +E G LLL +M+ +Y +
Sbjct: 276  GFAAHGCATNAIHSLERMQVDDGLRPDGVVLLVVLMACTHAGLLEKGKLLLDNMKTQYGI 335

Query: 804  APEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVA 625
             P+HEHYSC +D+LC+ GRL EA           LASVWG+LL+GCRI  NV+LAE AV 
Sbjct: 336  VPKHEHYSCVIDLLCKAGRLNEALKLIRKMPMKPLASVWGALLSGCRIHNNVDLAELAVK 395

Query: 624  E-LQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKA 448
            E LQ   +  G++ G YVQLSNIYL A R E+A ++RK++G  G KKTP  S I V+GK 
Sbjct: 396  ELLQLENDVRGEEVGAYVQLSNIYLGARRGEDAIRIRKMIGESGIKKTPGCSMIEVDGKV 455

Query: 447  SSFVAGDQAHPRRTEIWTMLELL 379
            + FV+GD +H  +  I  ML+L+
Sbjct: 456  NEFVSGDVSHSHQAWICAMLDLI 478



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 5/289 (1%)
 Frame = -3

Query: 1446 HALVVKNGLSSADPYVQTALLRLY----SHAIDDAPKLFDEIPNPDAVHYDVLMNVFIRR 1279
            HA+ + NGL   + Y  + L+       S  +  A  LF++I  P++  Y+ L+  + R 
Sbjct: 17   HAIFITNGLH-LNNYAISKLIAFCALSNSGDLSYASLLFNQIQTPNSYLYNTLIRAYSRS 75

Query: 1278 GVPSEAXXXXXXXXXXXL-EPDNFAVTTALTACAHAGALEQGVRIHKYLASKDASYAKDT 1102
              P  A              PDN+     + ACA+   L  G +IH ++  K+  +  D 
Sbjct: 76   SQPHLAVHYFLLMLKQSSLGPDNYTFNFVILACANCSWLVSGRQIHNWVV-KNGLFLVDA 134

Query: 1101 FLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAYAMHGFPEKAIACVRRMQEV 922
             + +ALV +YA+C  + D+ +VFD +P R+   W  ++  Y   G   +A+   R M  V
Sbjct: 135  HVQTALVRLYAECKVLDDSKKVFDEIPERDVIQWNVLMNGYVRCGLASEALKVFRDML-V 193

Query: 921  DQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAPEHEHYSCAVDMLCRVGRLE 742
                PD                +  G  +   ++ +  +  +    +  VDM  + G ++
Sbjct: 194  TGFEPDNFCVATGLAACAHLGALRQGKWIDEYVKKRTGLKSDVFIGTALVDMYAKCGCID 253

Query: 741  EAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAELQRFTESDG 595
             A           + S W +++ G    G    A  A+  L+R    DG
Sbjct: 254  LAVEAFEGMPKRNVVS-WAAMIGGFAAHG---CATNAIHSLERMQVDDG 298


>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Solanum tuberosum]
          Length = 512

 Score =  326 bits (836), Expect = 2e-86
 Identities = 170/382 (44%), Positives = 242/382 (63%), Gaps = 3/382 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSH--AIDDAPKL 1345
            D  +FPF++ ACA     V+G Q+H+ V+KN  S+++ +VQTAL+R Y++  A+DDA K+
Sbjct: 121  DSFTFPFLIIACANGPLEVEGKQIHSWVIKNSFSASNAHVQTALIRFYTNCKALDDARKV 180

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGAL 1165
            FDEI + D +  +VLM+  ++ G+  EA           + PD + VTTAL ACA  GAL
Sbjct: 181  FDEITDIDVIQCNVLMSGHLQSGLAKEALSIFQDMLGRGVGPDEYCVTTALGACAQLGAL 240

Query: 1164 EQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIG 985
            EQG  IH+++ +K      D F+GSALV MYAKCGCI  A EVF+++P RN H WATMI 
Sbjct: 241  EQGKWIHEHV-TKSEWLEYDVFIGSALVDMYAKCGCINMASEVFESMPKRNKHSWATMIR 299

Query: 984  AYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEV 805
             +A+HG PE AI+C+ RMQ  D L+PD                 ++G  LL +ME+ Y V
Sbjct: 300  GFAVHGRPELAISCLERMQVADGLKPDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGV 359

Query: 804  APEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVA 625
             PEHEH+SC VD+LCR GRL++A            ASVWG+LL+GCR   NV LAE AV 
Sbjct: 360  TPEHEHFSCVVDLLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCRNHNNVNLAELAVK 419

Query: 624  ELQRFTE-SDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKA 448
            E+    + ++ +++  YVQLSNIYL A + ++A ++R+ +G RG +KTP  SAI ++G  
Sbjct: 420  EILLVEDGNEAEEDSAYVQLSNIYLAARQCDDARRIRRRIGDRGLRKTPGYSAIEIDGMI 479

Query: 447  SSFVAGDQAHPRRTEIWTMLEL 382
            + F++GD +H    +I  +L+L
Sbjct: 480  NEFISGDVSHTCLADIHKVLDL 501


>gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 499

 Score =  322 bits (826), Expect = 2e-85
 Identities = 171/377 (45%), Positives = 230/377 (61%), Gaps = 3/377 (0%)
 Frame = -3

Query: 1500 FVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAI--DDAPKLFDEIPN 1327
            F+L +CA   SL  G Q+   V KNG+ S+D YVQT ++RLY  A    DA K+FDEI  
Sbjct: 117  FILVSCAKTCSLRSGKQIQNWVFKNGMFSSDSYVQTGVIRLYVEARLWVDARKVFDEIAY 176

Query: 1326 PDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQGVRI 1147
             D V ++VLM+   R  + ++A           ++PD F +TTALTACA  G+L +G  I
Sbjct: 177  VDVVKWNVLMSGLARCRLGTQALSVFKELLVFGIQPDEFCLTTALTACAQNGSLREGKWI 236

Query: 1146 HKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAYAMHG 967
            H+YL  ++     D F+G+ALV MYAKCGC+  AVEVF+ +  RN + WA MIG +A+HG
Sbjct: 237  HEYLRKREKCLELDVFIGTALVDMYAKCGCLDLAVEVFEGMSKRNVYSWAAMIGGFAVHG 296

Query: 966  FPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAPEHEH 787
               KAI C  RMQ  D +RPD                 E+GL LL +ME +Y + P+HEH
Sbjct: 297  HARKAIHCFERMQN-DGIRPDGVVLLGVLTACTHAGLAEEGLFLLNNMEGQYRIVPKHEH 355

Query: 786  YSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAELQRFT 607
            YSC VD+LCR G+ +EA           LASVWG+LL  CRI  NV+LAE AV EL    
Sbjct: 356  YSCVVDLLCRTGKFDEALKLIRRMPMRPLASVWGALLNSCRIYNNVQLAELAVKELLELE 415

Query: 606  ESDGDDE-GVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASSFVAG 430
            + DGD+E    VQLSNIY +A + E+  ++R+++G RG KK P  S I V+G+ + FV+G
Sbjct: 416  DCDGDEEDAALVQLSNIYFSAQKSEDGHRIRRMIGDRGLKKAPGCSMIEVDGRMTEFVSG 475

Query: 429  DQAHPRRTEIWTMLELL 379
            D +HP  ++I T+L LL
Sbjct: 476  DISHPLHSQIHTILRLL 492


>ref|NP_189505.2| putative pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana] gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g28640 gi|9294278|dbj|BAB02180.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643948|gb|AEE77469.1| putative pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  321 bits (823), Expect = 5e-85
 Identities = 170/381 (44%), Positives = 233/381 (61%), Gaps = 3/381 (0%)
 Frame = -3

Query: 1509 SFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLY--SHAIDDAPKLFDE 1336
            +F F++ AC        G Q+H  VVKNG+  +D +VQT +LR+Y     + DA K+FDE
Sbjct: 118  TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDE 177

Query: 1335 IPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQG 1156
            IP PD V +DVLMN ++R G+ SE            LEPD F+VTTALTACA  GAL QG
Sbjct: 178  IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237

Query: 1155 VRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAYA 976
              IH+++  K +    D F+G+ALV MYAKCGCI+ AVEVF  +  RN   WA +IG YA
Sbjct: 238  KWIHEFVKKK-SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA 296

Query: 975  MHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAPE 796
             +G+ +KA+ C+ R++  D ++PD                +E+G  +L +MEA+YE+ P+
Sbjct: 297  AYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPK 356

Query: 795  HEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAELQ 616
            HEHYSC VD++CR GRL++A           LASVWG+LL GCR   NVEL E AV  L 
Sbjct: 357  HEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLL 416

Query: 615  RFTESD-GDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASSF 439
               + +  ++E   VQLSNIY +  R  EA KVR ++  RG +KTP  S + V+G  + F
Sbjct: 417  DLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKF 476

Query: 438  VAGDQAHPRRTEIWTMLELLT 376
            V+GD +HP   +I T++ LL+
Sbjct: 477  VSGDVSHPNLLQIHTVIHLLS 497



 Score = 62.4 bits (150), Expect = 6e-07
 Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 4/205 (1%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSH--AIDDAPKL 1345
            D  S    L ACA  G+L  G  +H  V K     +D +V TAL+ +Y+    I+ A ++
Sbjct: 217  DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEA-XXXXXXXXXXXLEPDNFAVTTALTACAHAGA 1168
            F ++   +   +  L+  +   G   +A            ++PD+  +   L ACAH G 
Sbjct: 277  FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF 336

Query: 1167 LEQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRN-NHMWATM 991
            LE+G  + + + ++     K     S +V +  + G + DA+ + + +P +    +W  +
Sbjct: 337  LEEGRSMLENMEARYEITPKHEHY-SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGAL 395

Query: 990  IGAYAMHGFPEKAIACVRRMQEVDQ 916
            +     H   E     V+ + ++++
Sbjct: 396  LNGCRTHKNVELGELAVKNLLDLEK 420


>ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Solanum lycopersicum]
          Length = 487

 Score =  321 bits (823), Expect = 5e-85
 Identities = 168/382 (43%), Positives = 241/382 (63%), Gaps = 3/382 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSH--AIDDAPKL 1345
            D  +FPF+L ACA     V+G Q+H+ ++KN  S+++ +VQTAL+R Y++  A+DDA K+
Sbjct: 96   DSFTFPFLLIACANGPLEVEGKQIHSWIIKNSFSASNAHVQTALIRFYTNCKALDDARKV 155

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGAL 1165
            FDEI + D +  +VLM+  ++ G+  EA           + PD + VTTAL ACA  GAL
Sbjct: 156  FDEITDIDVIQCNVLMSGHLQSGLAKEALSIFQDMLGRGVGPDEYCVTTALGACAQLGAL 215

Query: 1164 EQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIG 985
            EQG  IH+++ +K      D F+GSALV MYAKCG I  A EVF+++P RN H WATMI 
Sbjct: 216  EQGKWIHEHV-TKSEWLEYDVFIGSALVDMYAKCGSINLASEVFESMPTRNKHSWATMIR 274

Query: 984  AYAMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEV 805
             +A+HG PE A++C+ RMQ  D L+PD                 ++G  LL +ME+ Y V
Sbjct: 275  GFAVHGRPELALSCLERMQVADGLKPDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGV 334

Query: 804  APEHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVA 625
             PEHEH+SC VD+LCR GRL++A            ASVWG+LL+GCR   NV LAE AV 
Sbjct: 335  TPEHEHFSCVVDLLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCRNHNNVNLAELAVK 394

Query: 624  ELQRFTE-SDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKA 448
            E+    + ++ +++  YVQLSNIYL A + ++A ++R+ +G RG +KTP  SAI ++G  
Sbjct: 395  EILLVEDGNEAEEDSAYVQLSNIYLAARQCDDARRIRRRIGDRGLRKTPGYSAIEIDGMV 454

Query: 447  SSFVAGDQAHPRRTEIWTMLEL 382
            + F++GD +H    +I  +L+L
Sbjct: 455  NEFISGDVSHICLADIHKVLDL 476


>ref|XP_002877120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297322958|gb|EFH53379.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 399

 Score =  321 bits (823), Expect = 5e-85
 Identities = 169/381 (44%), Positives = 233/381 (61%), Gaps = 3/381 (0%)
 Frame = -3

Query: 1509 SFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLY--SHAIDDAPKLFDE 1336
            +F F++ AC        G Q+H  VVKNG+  +D +VQT +LR+Y     + DA K+FDE
Sbjct: 13   TFYFLIVACFKACLFSVGKQIHCWVVKNGVFLSDGHVQTGILRIYVEDKVLLDAHKVFDE 72

Query: 1335 IPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQG 1156
            IP PD V +DVLMN ++R G+ SE            +EPD F+VTTALTACA  GAL QG
Sbjct: 73   IPKPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVRGVEPDEFSVTTALTACAQVGALAQG 132

Query: 1155 VRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAYA 976
              IH+++  K      D F+G+ALV MYAKCGCI+ AVEVF+ +  RN   WA +IG YA
Sbjct: 133  KWIHEFVKKK-RWIESDVFVGTALVDMYAKCGCIEMAVEVFEKLSRRNVFSWAALIGGYA 191

Query: 975  MHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAPE 796
             +G+ +KA+ C+ RM+  D ++PD                +++G  +LG+MEA+Y + P+
Sbjct: 192  AYGYAKKAMTCLDRMEREDGIKPDSVVLLGVLAACAHGGFLQEGRAMLGNMEARYGITPK 251

Query: 795  HEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAELQ 616
            HEHYSC VD++CR GRL++A           LASVWG+LL GCR   NVEL E AV  L 
Sbjct: 252  HEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLL 311

Query: 615  RFTESDG-DDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASSF 439
               + +  ++E   VQLSNIY +  R  EA KVR ++  RG +KTP  S + V+G  + F
Sbjct: 312  DLEKGNAEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGIRKTPGWSVLEVDGNVTKF 371

Query: 438  VAGDQAHPRRTEIWTMLELLT 376
            V+GD +HP   +I T++ LL+
Sbjct: 372  VSGDVSHPNLLQIHTVIHLLS 392



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 4/205 (1%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSH--AIDDAPKL 1345
            D  S    L ACA  G+L  G  +H  V K     +D +V TAL+ +Y+    I+ A ++
Sbjct: 112  DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIEMAVEV 171

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEA-XXXXXXXXXXXLEPDNFAVTTALTACAHAGA 1168
            F+++   +   +  L+  +   G   +A            ++PD+  +   L ACAH G 
Sbjct: 172  FEKLSRRNVFSWAALIGGYAAYGYAKKAMTCLDRMEREDGIKPDSVVLLGVLAACAHGGF 231

Query: 1167 LEQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRN-NHMWATM 991
            L++G  +   + ++     K     S +V +  + G + DA+++ + +P +    +W  +
Sbjct: 232  LQEGRAMLGNMEARYGITPKHEHY-SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 290

Query: 990  IGAYAMHGFPEKAIACVRRMQEVDQ 916
            +     H   E     V+ + ++++
Sbjct: 291  LNGCRTHKNVELGELAVKNLLDLEK 315


>ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutrema salsugineum]
            gi|557091992|gb|ESQ32639.1| hypothetical protein
            EUTSA_v10005682mg [Eutrema salsugineum]
          Length = 505

 Score =  321 bits (822), Expect = 7e-85
 Identities = 169/381 (44%), Positives = 231/381 (60%), Gaps = 3/381 (0%)
 Frame = -3

Query: 1509 SFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLY--SHAIDDAPKLFDE 1336
            +F F+L A         G Q+H  V+KNG+ S+D +VQT ++RLY     + DA K+FDE
Sbjct: 119  TFHFLLVAFLNASLFSVGKQIHCWVIKNGVLSSDGHVQTGIIRLYIEGKVLPDARKVFDE 178

Query: 1335 IPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQG 1156
            IP+PD V +DVLMN ++R G+ SE             EPD F+VTTALTACA  GAL QG
Sbjct: 179  IPHPDVVKWDVLMNGYVRCGLGSEGLHVFREMLARGTEPDKFSVTTALTACAQVGALAQG 238

Query: 1155 VRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAYA 976
              IHK L  K      D ++G+ALV MYAKCGCI+ A+EVF+ +  RN   WA +IG YA
Sbjct: 239  KLIHKLLKKKKL-LESDIYVGTALVDMYAKCGCIETALEVFENLSRRNVFSWAVLIGGYA 297

Query: 975  MHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAPE 796
             +G+ +KAI C+ +M+  D ++PD                +++G  LL +MEA+Y + P+
Sbjct: 298  AYGYAKKAIMCLDQMEREDGIKPDSVVLLTVLAACAHGGFLQEGRALLDNMEARYGITPK 357

Query: 795  HEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAETAVAELQ 616
            HEHYSC VD++CR GRL++A           LASVWG+LL GCR   NVEL E AV  L 
Sbjct: 358  HEHYSCIVDLICRAGRLDDAVDLIEGMPMKPLASVWGALLNGCRTHKNVELGELAVKNLL 417

Query: 615  RFTESDGD-DEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASSF 439
               + + D +E   VQLSNIYL A R  EA  +R+++G +G +K P  S + V+G  + F
Sbjct: 418  DLEKGNADEEEAALVQLSNIYLIAQRNTEASNIRRMIGQKGIRKAPGCSVLEVDGNVTKF 477

Query: 438  VAGDQAHPRRTEIWTMLELLT 376
            V+GD +H    +I TM+ LL+
Sbjct: 478  VSGDVSHQNLLQIHTMIHLLS 498



 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSH--AIDDAPKL 1345
            D  S    L ACA  G+L  G  +H L+ K  L  +D YV TAL+ +Y+    I+ A ++
Sbjct: 218  DKFSVTTALTACAQVGALAQGKLIHKLLKKKKLLESDIYVGTALVDMYAKCGCIETALEV 277

Query: 1344 FDEIPNPDAVHYDVLMNVFIRRGVPSEA-XXXXXXXXXXXLEPDNFAVTTALTACAHAGA 1168
            F+ +   +   + VL+  +   G   +A            ++PD+  + T L ACAH G 
Sbjct: 278  FENLSRRNVFSWAVLIGGYAAYGYAKKAIMCLDQMEREDGIKPDSVVLLTVLAACAHGGF 337

Query: 1167 LEQGVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRN-NHMWATM 991
            L++G  +   + ++     K     S +V +  + G + DAV++ + +P +    +W  +
Sbjct: 338  LQEGRALLDNMEARYGITPKHEHY-SCIVDLICRAGRLDDAVDLIEGMPMKPLASVWGAL 396

Query: 990  IGAYAMHGFPEKAIACVRRMQEVDQLRPD 904
            +     H   E     V+ + ++++   D
Sbjct: 397  LNGCRTHKNVELGELAVKNLLDLEKGNAD 425


>gb|EEE59880.1| hypothetical protein OsJ_12480 [Oryza sativa Japonica Group]
          Length = 367

 Score =  318 bits (815), Expect = 4e-84
 Identities = 176/385 (45%), Positives = 232/385 (60%), Gaps = 1/385 (0%)
 Frame = -3

Query: 1518 DHHSFPFVLAACAANGSLVDGAQVHALVVKNGLSSADPYVQTALLRLYSHAIDDAPKLFD 1339
            DH SFPF L+A AA  S   G Q+HAL+VKNGL  +D YV TALL+L++   DDA ++FD
Sbjct: 12   DHLSFPFALSAAAAV-SPSPGTQLHALLVKNGLFPSDHYVATALLQLHAARPDDARRVFD 70

Query: 1338 EIPNPDAVHYDVLMNVFIRRGVPSEAXXXXXXXXXXXLEPDNFAVTTALTACAHAGALEQ 1159
            E+P  +A+HYD+++  + R G+ +E            + PD   +TTA+TACA AGALE 
Sbjct: 71   ELPRREAIHYDLVIGAYARAGMAAEGLGVFRAMFMDGVAPDAVVLTTAITACAQAGALEC 130

Query: 1158 GVRIHKYLASKDASYAKDTFLGSALVSMYAKCGCIKDAVEVFDAVPNRNNHMWATMIGAY 979
            G  +H+Y+         D F+GSALVSMYAKCGC++ AV VFD +P RN+++W TM+GA+
Sbjct: 131  GEWVHRYVERSAPELLGDAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAF 190

Query: 978  AMHGFPEKAIACVRRMQEVDQLRPDXXXXXXXXXXXXXXXXVEDGLLLLGDMEAKYEVAP 799
            A+HG  E+A++C+ RM   D +RPD                V+DGL LL +M  +Y VAP
Sbjct: 191  AVHGRAEEAVSCLDRMAREDGVRPDGVAVLGALSACAHAGKVDDGLRLLREMSRRYGVAP 250

Query: 798  EHEHYSCAVDMLCRVGRLEEAXXXXXXXXXXXLASVWGSLLTGCRIQGNVELAET-AVAE 622
             HEHY+C VDMLCRV RLE+A                            V L ET  +A 
Sbjct: 251  GHEHYACTVDMLCRVDRLEDA----------------------------VALIETMPMAP 282

Query: 621  LQRFTESDGDDEGVYVQLSNIYLNANRKEEACKVRKLVGSRGSKKTPARSAIHVEGKASS 442
            L                LSNIYL+ANRK++A +VRKL+GSRG +K PA S + V+G  SS
Sbjct: 283  L--------------ASLSNIYLDANRKDDARRVRKLIGSRGIRKVPAYSEVEVDGVVSS 328

Query: 441  FVAGDQAHPRRTEIWTMLELLTDHI 367
            FVA DQAHP+R EIW +L LL D +
Sbjct: 329  FVADDQAHPQRVEIWEVLRLLADQM 353