BLASTX nr result

ID: Zingiber25_contig00003250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00003250
         (1337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    83   3e-13
ref|XP_003638432.1| Craniofacial development protein [Medicago t...    75   5e-11
gb|ABD28619.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    72   7e-10

>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 57/127 (44%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
 Frame = +2

Query: 983  QTMTNIQ*MNPLNYCANARLFPGRNALQGPTVTSRQGPLHLQNSGVVXXXXXXXXXXLHL 1162
            Q   N   MN  +YCA AR  PG NA  G +  S+Q PLH                    
Sbjct: 422  QKKPNPHDMNQRHYCAKARSLPGSNAPYGSSTVSKQEPLHRCPD---------------- 465

Query: 1163 HENLGVVLNRQEFSHHR--------LDKNK-YDRKTNNLRFGTWNIGTLTGKSMEVVDMM 1315
                 VVLN Q FS  R        + K K   R    LRFGTWNIGTLTGKSMEVVD M
Sbjct: 466  -----VVLNEQGFSRFRERTRVNKLVHKGKGKGRSDRRLRFGTWNIGTLTGKSMEVVDTM 520

Query: 1316 IRRKINI 1336
             RRKINI
Sbjct: 521  TRRKINI 527


>ref|XP_003638432.1| Craniofacial development protein [Medicago truncatula]
            gi|355504367|gb|AES85570.1| Craniofacial development
            protein [Medicago truncatula]
          Length = 349

 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 49/111 (44%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = +2

Query: 1007 MNPLNYCANARLFPGRNALQGPT-VTSRQGPLHLQNSGVVXXXXXXXXXXLHLHENLGVV 1183
            M+ +    NAR  P  NAL G + V++ QGPLH                       L VV
Sbjct: 1    MDQIRNSVNARSLPRSNALYGSSAVSNEQGPLH---------------------RRLDVV 39

Query: 1184 LNRQEFSH-HRLDKNKYDRKTNNLRFGTWNIGTLTGKSMEVVDMMIRRKIN 1333
             N+Q F H H   + K     N +RFGTWNIGTLTGKSMEVVD M RR+IN
Sbjct: 40   KNKQGFPHLHERVRVKKLVHENRIRFGTWNIGTLTGKSMEVVDTMTRRRIN 90


>gb|ABD28619.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 292

 Score = 71.6 bits (174), Expect = 7e-10
 Identities = 48/112 (42%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
 Frame = +2

Query: 1007 MNPLNYCANARLFPGRNAL-QGPTVTSRQGPLHLQNSGVVXXXXXXXXXXLHLHENLGVV 1183
            M+ +    NAR  PG N L    TV++ QG LH                      +L VV
Sbjct: 1    MDQIRNSVNARSLPGSNTLYDSSTVSNEQGLLHC---------------------HLDVV 39

Query: 1184 LNRQEFSH--HRLDKNKYDRKTNNLRFGTWNIGTLTGKSMEVVDMMIRRKIN 1333
             N+Q F H   R+   K   + N +RFGTWNIGTLTGKSMEVVD M RR+IN
Sbjct: 40   KNKQRFPHLRERVRVKKLVHE-NRIRFGTWNIGTLTGKSMEVVDTMTRRRIN 90


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