BLASTX nr result
ID: Zingiber25_contig00003115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00003115
(2101 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 259 4e-66
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 254 1e-64
ref|XP_002531375.1| RNA and export factor binding protein, putat... 253 2e-64
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 248 6e-63
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 248 7e-63
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 247 1e-62
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro... 246 2e-62
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 244 1e-61
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 243 2e-61
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus... 242 4e-61
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo... 242 5e-61
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 241 7e-61
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 239 3e-60
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera] 239 5e-60
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 237 1e-59
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro... 236 4e-59
gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus pe... 235 7e-59
ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer... 230 2e-57
emb|CAG26903.1| ALY protein [Nicotiana benthamiana] 230 2e-57
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 229 3e-57
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 259 bits (661), Expect = 4e-66
Identities = 144/244 (59%), Positives = 163/244 (66%), Gaps = 5/244 (2%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXR--FPNRATNRSAPYSVGKAPESA 1789
MS ALDMSLDD+IKNNK++ PNR NR PYSV KAPE+
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETT 60
Query: 1788 WQHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
WQHDM+ A +P + S+IETGTKLYISNL+YGVSNEDIKELFSEVGD+KRYSI+
Sbjct: 61 WQHDMF-ADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGV 1429
YDRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM IEI+GTNI TPA VP +NG
Sbjct: 120 YDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGT 179
Query: 1428 MGNPIGGLRS--GTI-XXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHSEA 1258
GN GGLRS G + GE VSA+ LDADL+KYHSEA
Sbjct: 180 FGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEA 239
Query: 1257 MQTN 1246
MQ N
Sbjct: 240 MQIN 243
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 254 bits (648), Expect = 1e-64
Identities = 145/254 (57%), Positives = 168/254 (66%), Gaps = 15/254 (5%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXRFP-----NRATNRSAPYSVGKA- 1801
MS ALDMSLDD+IKNNKK+ P NR NR+APYS+GKA
Sbjct: 1 MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAF 60
Query: 1800 ---PESAWQHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGD 1630
PE+ WQHD++ A P G + V A+ S+IETGTKLYISNL+YGVSNEDIKELFSEVGD
Sbjct: 61 QAAPETTWQHDLF-ADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSEVGD 119
Query: 1629 IKRYSINYDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVV 1450
+KRYSI+YDRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM IEI+GTN+ TPA +
Sbjct: 120 LKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPI 179
Query: 1449 PQPSNGVMGNPIGGLRS------GTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALD 1288
PQ +NG++ P G RS G I GE VSA LD
Sbjct: 180 PQVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAADLD 239
Query: 1287 ADLDKYHSEAMQTN 1246
ADL+KYHSEAMQ N
Sbjct: 240 ADLEKYHSEAMQIN 253
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 247
Score = 253 bits (646), Expect = 2e-64
Identities = 149/250 (59%), Positives = 166/250 (66%), Gaps = 11/250 (4%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
MS ALDMSLDDIIK+NKK + RF NR TNR+APY+ KAPES W
Sbjct: 1 MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTW 60
Query: 1785 QHDMYSAAPPGGFPV------PTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIK 1624
QHDM++ GG + ++AS IETGTKLYISNLEYGVSNEDIKELFSEVGD+K
Sbjct: 61 QHDMFT--DQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLK 118
Query: 1623 RYSINYDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQ 1444
RYSI+YDRSGRSKGTAEVVF++RTDALAAVKRYNNV LDGKPM IEI+GTNI TPA P
Sbjct: 119 RYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATP- 177
Query: 1443 PSNGVMGN----PIGGLRSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLD 1276
+NG GN P GG G GE VSA+ LDADL+
Sbjct: 178 AANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLE 237
Query: 1275 KYHSEAMQTN 1246
KYHSEAMQTN
Sbjct: 238 KYHSEAMQTN 247
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 248 bits (634), Expect = 6e-63
Identities = 139/248 (56%), Positives = 166/248 (66%), Gaps = 9/248 (3%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
MS A+DMSLDDIIKNNKK+ + R PNRA NR+APY+ KAPE+ W
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYAPAKAPEATW 60
Query: 1785 QHDMYSA--APPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSI 1612
QHD+Y+ G+P +A+SIETGTKLYISNL+YGVSN+DIKELF+EVGD+KR+++
Sbjct: 61 QHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAV 120
Query: 1611 NYDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNG 1432
+YDRSGRSKGTAEVVF++R DA++AVKRYNNV LDGKPM IEI+GTNI TP V P P NG
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPAP-NG 179
Query: 1431 VMGNPIGGLRSG------TIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKY 1270
+GN G RSG GE VSAD LDADL+KY
Sbjct: 180 AIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKY 239
Query: 1269 HSEAMQTN 1246
H+EAMQ N
Sbjct: 240 HAEAMQLN 247
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 248 bits (633), Expect = 7e-63
Identities = 139/248 (56%), Positives = 166/248 (66%), Gaps = 9/248 (3%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
MS A+DMSLDDIIKNNKK+ + RFPNRA NR+APY+ KAPE+ W
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATW 60
Query: 1785 QHDMYS--AAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSI 1612
QHD+Y+ G+P +A+SIETGTKLYISNL+YGVS++DIKELF+EVGD+KR+++
Sbjct: 61 QHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAV 120
Query: 1611 NYDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNG 1432
+YDRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM IEI+GTNI TP V P NG
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP-ARNG 179
Query: 1431 VMGNPIGGLRSG------TIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKY 1270
+GN G RSG GE VSAD LDADL+KY
Sbjct: 180 AIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKY 239
Query: 1269 HSEAMQTN 1246
H+EAMQ N
Sbjct: 240 HAEAMQLN 247
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 247 bits (631), Expect = 1e-62
Identities = 137/245 (55%), Positives = 164/245 (66%), Gaps = 6/245 (2%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXR-FPNRATNRSAPYSVGKAPESAW 1786
MS ALDM+L+DIIKNNKK++ R PNRA NR+APY+ KAPE+AW
Sbjct: 1 MSAALDMTLEDIIKNNKKSSLANTRGRGRASGPGPARRLPNRAANRAAPYAAAKAPETAW 60
Query: 1785 QHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSINY 1606
+HDMY+ P P +ASSIETGTKLYISNL+YGVSN+DIKELF EVGD+KR++++Y
Sbjct: 61 KHDMYANQPVAA-AYPGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKRHTVHY 119
Query: 1605 DRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGVM 1426
DRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM +EI+GTNI T A P NG
Sbjct: 120 DRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHA-APPAVNGTF 178
Query: 1425 GNPI-----GGLRSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHSE 1261
GNP G RSG++ E VSA+ LDADL+KYH+E
Sbjct: 179 GNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADLEKYHAE 238
Query: 1260 AMQTN 1246
AMQ N
Sbjct: 239 AMQLN 243
>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 246 bits (629), Expect = 2e-62
Identities = 138/241 (57%), Positives = 160/241 (66%), Gaps = 2/241 (0%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT--NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESA 1789
M+ LDMSLDDIIKNNKK+ + RF NR NR+ PYS KAPE+A
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETA 60
Query: 1788 WQHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
W HDM+ +P +AS+IETGTKLY+SNL+YGVSNEDIKELFSEVGD+KRYSIN
Sbjct: 61 WSHDMF-VDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSIN 119
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGV 1429
YD+SGRSKGTAE+VF+++ DALAA+KRYNNV LDGKPM +EI+GTNI TPA VP PSN
Sbjct: 120 YDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA-VPAPSNAS 178
Query: 1428 MGNPIGGLRSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHSEAMQT 1249
GNP G R G GE +SA+ LDADLDKYH EAMQ
Sbjct: 179 FGNPNGFPRGG--RAMGRNRGGGRGRSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQI 236
Query: 1248 N 1246
N
Sbjct: 237 N 237
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 244 bits (623), Expect = 1e-61
Identities = 135/240 (56%), Positives = 158/240 (65%), Gaps = 2/240 (0%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVG-KAPESAW 1786
M+ LDMSLDD+IK+N+K+ RFPNRA NR+APYS +AP++ W
Sbjct: 1 MTNPLDMSLDDLIKSNRKSGLTRTRPPLNSGNGPSRRFPNRAANRTAPYSKPVQAPDTTW 60
Query: 1785 QHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSINY 1606
QHDM+ GFP +ASSIETGTKLYISNL+YGVSNEDIKELFSEVGD+KRYS++Y
Sbjct: 61 QHDMF-VDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKRYSVHY 119
Query: 1605 DRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGVM 1426
DRSGRSKGTAEVVF++RTDA A KRYN V LDGKPM IEI+GTN+ TP +P +NG
Sbjct: 120 DRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPATNGKF 179
Query: 1425 GNPIGGLRSGT-IXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHSEAMQT 1249
NP G RSG GE VSA+ LDADL+ YH EAMQT
Sbjct: 180 ANPNGVPRSGQGRGSFSGRSRGPGRGARRGRGQGRGQGEKVSAEDLDADLENYHKEAMQT 239
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 243 bits (620), Expect = 2e-61
Identities = 136/243 (55%), Positives = 160/243 (65%), Gaps = 4/243 (1%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
MS AL+MSLDD+IK N+K+ + RFPNR NRS PY+ KAPE+ W
Sbjct: 1 MSSALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGPARRFPNRGANRSGPYTAAKAPETTW 60
Query: 1785 QHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSINY 1606
QHDMYS F +AS+IETGTKLYISNL+YGVSN+DIKELF+EVGD+KR++I+Y
Sbjct: 61 QHDMYSDKG-AAFQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRFTIHY 119
Query: 1605 DRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGVM 1426
DRSGRSKGTAEVVF++RTDA+AAVKRYNNV LDGKPM IEI+GTN+ TP P NG
Sbjct: 120 DRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPG-APSAGNGAF 178
Query: 1425 GNPIGGLRSG---TIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHSEAM 1255
GN G R G GE VSA+ LDA+L+KYHSEAM
Sbjct: 179 GNSNGAPRGGHGRGGGFGKQRGGGGGRGFGRGRGRGKGRGEKVSAEDLDAELEKYHSEAM 238
Query: 1254 QTN 1246
QTN
Sbjct: 239 QTN 241
>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 242 bits (618), Expect = 4e-61
Identities = 138/246 (56%), Positives = 162/246 (65%), Gaps = 7/246 (2%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
MS ALDM+LDDIIKNNKK+ + R PNRA NR APY+ KAPESAW
Sbjct: 1 MSAALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLPNRAGNRPAPYAAAKAPESAW 60
Query: 1785 QHDMYS-AAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
QHDMY+ F +ASSIETGTKLYISNL+YGVSN+DIKELF EVGD+KR++++
Sbjct: 61 QHDMYADQGVATAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH 120
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGV 1429
YDRSGRSKGTAEVVF++R DA+AAVKRY+NV LDGKPM +EI+GTNI T A VP P NG
Sbjct: 121 YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAVP-PVNGT 179
Query: 1428 MGNP-----IGGLRSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHS 1264
GN G RSG + E VSA+ LDA+L+KYH+
Sbjct: 180 FGNSGGPPRSGQGRSGLLGRPRGAPRGRGSSRRGRGGRGRDRDEKVSAEDLDAELEKYHA 239
Query: 1263 EAMQTN 1246
EAMQ N
Sbjct: 240 EAMQLN 245
>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding protein
2-like [Cucumis sativus]
Length = 248
Score = 242 bits (617), Expect = 5e-61
Identities = 137/250 (54%), Positives = 160/250 (64%), Gaps = 11/250 (4%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT--NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESA 1789
M+ LDMSLDDIIKNNKK+ + RF NR NR+ PYS KAPE+A
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETA 60
Query: 1788 WQHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
W HDM+ +P +AS+IETGTKLY+SNL+YGVSNEDIKELFSEVGD+KRYSIN
Sbjct: 61 WSHDMF-VDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSIN 119
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGV 1429
YD+SGRSKGTAE+ F+++ DALAA+KRYNNV LDGKPM +EI+GTNI TPAV P PSN
Sbjct: 120 YDKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAV-PAPSNAS 178
Query: 1428 MGNP---------IGGLRSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLD 1276
GNP +G R G GE +SA+ LDADLD
Sbjct: 179 FGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLD 238
Query: 1275 KYHSEAMQTN 1246
KYH EAMQ N
Sbjct: 239 KYHEEAMQIN 248
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 241 bits (616), Expect = 7e-61
Identities = 139/249 (55%), Positives = 157/249 (63%), Gaps = 10/249 (4%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXR--FPNRATNRSAPYSVG-KAPES 1792
MS L MSLDDIIK NKKT PNRA NR+APY+ KAPE+
Sbjct: 1 MSDPLSMSLDDIIKTNKKTGSGNPRGRGRLSGGPGPARRVPNRAPNRAAPYAAAPKAPET 60
Query: 1791 AWQHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSI 1612
WQHDMY F +AS+I+TGTKLYISNLEYGVSNEDIKELFSEVGD+KRY+I
Sbjct: 61 TWQHDMYMDQGTA-FAAQAGRASAIQTGTKLYISNLEYGVSNEDIKELFSEVGDLKRYAI 119
Query: 1611 NYDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNG 1432
+YDRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM IEI+GTN+ TPA P P+NG
Sbjct: 120 HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNVATPAAPPPPANG 179
Query: 1431 VMGNPIGGLRSGT-------IXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDK 1273
GN G R G GE +SAD LDADL+K
Sbjct: 180 SFGNSNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRGQGRGTGEKISADDLDADLEK 239
Query: 1272 YHSEAMQTN 1246
YH+EAMQ N
Sbjct: 240 YHAEAMQEN 248
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 239 bits (611), Expect = 3e-60
Identities = 144/251 (57%), Positives = 162/251 (64%), Gaps = 12/251 (4%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
MS ALDMSLDDIIKNNKK+ + R PNR NR APY+ KAPE+ W
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTAKAPETTW 60
Query: 1785 QHDMYSAAPPGGFPVPTA-KASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
QHDM+ A FPV A +AS+IETGTKLYISNL+YGVSNEDIKELFSEVGD+KRYSI+
Sbjct: 61 QHDMF-ADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQP---- 1441
YDRSGRSKGTAEVV+++R DA+AAVKRYNNV LDGKPM IEI+GTNI T P
Sbjct: 120 YDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAPAANVNF 179
Query: 1440 --SNGVMGNPIGGL-RSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKY 1270
SNGV P GG R G E +SA+ LDADLDKY
Sbjct: 180 GNSNGV---PRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKY 236
Query: 1269 H---SEAMQTN 1246
+ SEAMQTN
Sbjct: 237 YSEASEAMQTN 247
>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 239 bits (609), Expect = 5e-60
Identities = 123/189 (65%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXR--FPNRATNRSAPYSVGKAPESA 1789
MS ALDMSLDD+IKNNK++ PNR NR PYSV KAPE+
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETT 60
Query: 1788 WQHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
WQHDM+ A +P + S+IETGTKLYISNL+YGVSNEDIKELFSEVGD+KRYSI+
Sbjct: 61 WQHDMF-ADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGV 1429
YDRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM IEI+GTNI TPA VP +NG
Sbjct: 120 YDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGT 179
Query: 1428 MGNPIGGLR 1402
GN GGLR
Sbjct: 180 FGNSNGGLR 188
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 237 bits (605), Expect = 1e-59
Identities = 143/251 (56%), Positives = 161/251 (64%), Gaps = 12/251 (4%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
MS ALDMSLDDIIKNNKK+ + R PNR NR APY+ KAPE+ W
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTAKAPETTW 60
Query: 1785 QHDMYSAAPPGGFPVPTA-KASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
QHDM+ A FPV A +AS+IETGTKLYISNL+YGVSNEDIKELFSEVGD+KRYSI+
Sbjct: 61 QHDMF-ADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQP---- 1441
YDRSGRSKGTAEVV+++R DA+AAVKRYN V LDGKPM IEI+GTNI T P
Sbjct: 120 YDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAAPAANVNF 179
Query: 1440 --SNGVMGNPIGGL-RSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKY 1270
SNGV P GG R G E +SA+ LDADLDKY
Sbjct: 180 GNSNGV---PRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKY 236
Query: 1269 H---SEAMQTN 1246
+ SEAMQTN
Sbjct: 237 YSEASEAMQTN 247
>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 236 bits (601), Expect = 4e-59
Identities = 135/240 (56%), Positives = 159/240 (66%), Gaps = 1/240 (0%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
M+ LDMSLDDIIKNNKK+ + RFPNRA NR+ PYS KAPE+ W
Sbjct: 1 MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRT-PYSAPKAPETTW 59
Query: 1785 QHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSINY 1606
QHDM+ A P GF V +AS+I+TGTKLYISNL+YGVSNEDIKELFSEVGD+KR+ I+Y
Sbjct: 60 QHDMF-ADPSSGFLVQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHY 118
Query: 1605 DRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGVM 1426
D+SGRSKGTAEVVF++R DA+AAVK+YNNV LDGKPM IEI+GTNI TPAV P +
Sbjct: 119 DKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPF 178
Query: 1425 GNPIGGLRSGTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHSEAMQTN 1246
N G R E VSA+ LDADL+KYH+E+MQ N
Sbjct: 179 ENSNGAPRRQQ-GRGGPPSRQRGHGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN 237
>gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
Length = 252
Score = 235 bits (599), Expect = 7e-59
Identities = 131/251 (52%), Positives = 157/251 (62%), Gaps = 14/251 (5%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKT-NXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAW 1786
M L+MSLDD+IK +KK+ + R PNRA NR+ PY+ KAPE+AW
Sbjct: 1 MQDPLNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNRAANRTTPYAAAKAPETAW 60
Query: 1785 QHDMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSINY 1606
QHD+Y+ FP +AS+IETGTKLYISNL+YGVSNEDIKELFSEVGD+KRY ++Y
Sbjct: 61 QHDLYTDQGAAAFPAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGVHY 120
Query: 1605 DRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPA---VVPQPSN 1435
DRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM IEI+GTNI TP +P +N
Sbjct: 121 DRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTLPPAAN 180
Query: 1434 GVMGNPIGGLRSGTIXXXXXXXXXXXXXXXXXXXXXXXXG----------EPVSADALDA 1285
G GN G R G E VSA+ LDA
Sbjct: 181 GNFGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSAEDLDA 240
Query: 1284 DLDKYHSEAMQ 1252
+L+KYH+EAMQ
Sbjct: 241 ELEKYHAEAMQ 251
>ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
Length = 257
Score = 230 bits (587), Expect = 2e-57
Identities = 130/258 (50%), Positives = 158/258 (61%), Gaps = 19/258 (7%)
Frame = -2
Query: 1962 MSGALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGKAPESAWQ 1783
MS ALDM+L+DIIKNNKK+ R PNR +N +APYS KAPE+ WQ
Sbjct: 1 MSAALDMTLEDIIKNNKKSGSGNPRGRSRPGPGPARRLPNRVSNHAAPYSAAKAPETTWQ 60
Query: 1782 HDMYSAAP--PGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSIN 1609
HD+Y+ P + +A SIETGTKLYISNL+Y VSN+DIKELFSEVGD+KR+ ++
Sbjct: 61 HDLYADQPVAAAAYSAQGGRAPSIETGTKLYISNLDYAVSNDDIKELFSEVGDLKRHGVH 120
Query: 1608 YDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGV 1429
YDRSGRSKGTAEVVF++R DA+AAVKRYNNV LDGKPM IEI+GTNI TP V P NG
Sbjct: 121 YDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP-AVNGA 179
Query: 1428 MGNPIGGLRSG-----------------TIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSA 1300
+GN G +SG + VSA
Sbjct: 180 IGNFNGIPQSGQGRGGALRGPGGRGQGIRRNQGRGRGSGGGRGGGRGGGRGGGRDQKVSA 239
Query: 1299 DALDADLDKYHSEAMQTN 1246
+ LDA+L++YH+EAMQ N
Sbjct: 240 EDLDAELERYHAEAMQIN 257
>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 230 bits (587), Expect = 2e-57
Identities = 138/249 (55%), Positives = 155/249 (62%), Gaps = 13/249 (5%)
Frame = -2
Query: 1953 ALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXR---FPNRATNRSAPYSVGKAPESAWQ 1783
ALDMSLDD+IK NK FPNR+ NR+APYS KAPE+AW
Sbjct: 5 ALDMSLDDLIKKNKTDTGGKRRGRGRGGASGPGPARRFPNRSANRAAPYSTAKAPEAAWN 64
Query: 1782 HDMYSAAPPGGFPVPTA----KASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYS 1615
HDM++AA FP A ASSI TGTKLYISNL+YGVSNEDIKELFSE GD+KRY+
Sbjct: 65 HDMFAAADQA-FPFGQAGGDQAASSISTGTKLYISNLDYGVSNEDIKELFSEAGDLKRYA 123
Query: 1614 INYDRSGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSN 1435
I+YDRSGRSKGTAEVVF++R DALAAVKRYNNV LDGKPM IEI+GTNI TPA
Sbjct: 124 IHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPAFNGA 183
Query: 1434 GVMGNPIGGLRS------GTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDK 1273
G+ GG R+ G GE VSA+ LDADL K
Sbjct: 184 FGFGDTNGGPRTDQARSGGFGRSRGGRGRGRGFRGGSRGRGRGDRGEKVSAEDLDADLMK 243
Query: 1272 YHSEAMQTN 1246
YH+EAMQTN
Sbjct: 244 YHTEAMQTN 252
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 229 bits (585), Expect = 3e-57
Identities = 132/241 (54%), Positives = 160/241 (66%), Gaps = 5/241 (2%)
Frame = -2
Query: 1953 ALDMSLDDIIKNNKKTNXXXXXXXXXXXXXXXXRFPNRATNRSAPYSVGK--APESAWQH 1780
ALDMSLDDII+NN+K++ RF NRA N + PYS + APE++WQH
Sbjct: 5 ALDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFSNRAGNITTPYSKPQVQAPETSWQH 64
Query: 1779 DMYSAAPPGGFPVPTAKASSIETGTKLYISNLEYGVSNEDIKELFSEVGDIKRYSINYDR 1600
DM++ P P A+ASSIETGTKLYISNL++GVS EDIKELFSE+GD+KRYS++YDR
Sbjct: 65 DMFTDNPVSASAYP-ARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDR 123
Query: 1599 SGRSKGTAEVVFAKRTDALAAVKRYNNVLLDGKPMNIEIIGTNIPTPAVVPQPSNGVMGN 1420
SGRS+GTAE+VFA+R DA++AVKRYNNV LDGKPM IEI+GTNI T VP +NG+ N
Sbjct: 124 SGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNIATRPAVPPSTNGMYRN 183
Query: 1419 P-IGGLRS--GTIXXXXXXXXXXXXXXXXXXXXXXXXGEPVSADALDADLDKYHSEAMQT 1249
I RS G GE +SA+ LDADL+KYHSEAMQ
Sbjct: 184 QNIAAPRSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKYHSEAMQE 243
Query: 1248 N 1246
N
Sbjct: 244 N 244