BLASTX nr result
ID: Zingiber25_contig00002864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00002864
(1587 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 254 9e-65
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 252 3e-64
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 249 2e-63
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 249 3e-63
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 247 1e-62
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 246 2e-62
ref|XP_002531375.1| RNA and export factor binding protein, putat... 244 7e-62
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus... 241 6e-61
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 239 3e-60
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro... 238 4e-60
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 238 7e-60
ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solan... 237 1e-59
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 237 1e-59
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 236 2e-59
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera] 236 2e-59
gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus pe... 236 2e-59
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro... 236 2e-59
ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer... 233 1e-58
ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solan... 233 2e-58
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo... 232 3e-58
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 254 bits (648), Expect = 9e-65
Identities = 143/253 (56%), Positives = 172/253 (67%), Gaps = 16/253 (6%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXRFPIR-----SANRSAPYSVGKA- 1280
MSSALDMSLDD+IKNNKKS P+R +ANR+APYS+GKA
Sbjct: 1 MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAF 60
Query: 1279 ---PESAWQHDMYS-AVG-FPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDL 1115
PE+ WQHD+++ VG + AR S+IETGTKLYISNL+YGVSNEDIKELFSEVGDL
Sbjct: 61 QAAPETTWQHDLFADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSEVGDL 120
Query: 1114 KRYSINYDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVP 935
KRYSI+YDRSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTN+ TP +P
Sbjct: 121 KRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPIP 180
Query: 934 QLSNGAIGIANGAPRSIGPVRSFVXXXXXXXXXXXXXXXXXXXXG-----EPVSAAALDA 770
Q++NG + NG PRS+ P + + E VSAA LDA
Sbjct: 181 QVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAADLDA 240
Query: 769 DLDKYHAEVMQTN 731
DL+KYH+E MQ N
Sbjct: 241 DLEKYHSEAMQIN 253
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 252 bits (644), Expect = 3e-64
Identities = 143/243 (58%), Positives = 164/243 (67%), Gaps = 6/243 (2%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR--FPIRSANRSAPYSVGKAPESA 1268
MS+ALDMSLDD+IKNNK+S P R ANR PYSV KAPE+
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETT 60
Query: 1267 WQHDMYS--AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINY 1094
WQHDM++ A +PA R S+IETGTKLYISNL+YGVSNEDIKELFSEVGDLKRYSI+Y
Sbjct: 61 WQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 120
Query: 1093 DRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAI 914
DRSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTNI TP VP ++NG
Sbjct: 121 DRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGTF 180
Query: 913 GIANGAPRSI-GPVRSFVXXXXXXXXXXXXXXXXXXXXG-EPVSAAALDADLDKYHAEVM 740
G +NG RS G V S E VSA LDADL+KYH+E M
Sbjct: 181 GNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAM 240
Query: 739 QTN 731
Q N
Sbjct: 241 QIN 243
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 249 bits (636), Expect = 2e-63
Identities = 144/249 (57%), Positives = 170/249 (68%), Gaps = 12/249 (4%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
MS+A+DMSLDDIIKNNKKS R FP R+ANR+APY+ KAPE+ W
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATW 60
Query: 1264 QHDMYS-----AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSI 1100
QHD+Y+ A G+PA RA+SIETGTKLYISNL+YGVS++DIKELF+EVGDLKR+++
Sbjct: 61 QHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAV 120
Query: 1099 NYDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNG 920
+YDRSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTNI TP V P NG
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP-ARNG 179
Query: 919 AIGIANGAPRSIGPVRSFV------XXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDK 758
AIG +G PRS G R GE VSA LDADL+K
Sbjct: 180 AIGNFDGVPRS-GQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEK 238
Query: 757 YHAEVMQTN 731
YHAE MQ N
Sbjct: 239 YHAEAMQLN 247
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 249 bits (635), Expect = 3e-63
Identities = 144/249 (57%), Positives = 169/249 (67%), Gaps = 12/249 (4%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
MS+A+DMSLDDIIKNNKKS R P R+ANR+APY+ KAPE+ W
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYAPAKAPEATW 60
Query: 1264 QHDMYS-----AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSI 1100
QHD+Y+ A G+PA RA+SIETGTKLYISNL+YGVSN+DIKELF+EVGDLKR+++
Sbjct: 61 QHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAV 120
Query: 1099 NYDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNG 920
+YDRSGRSKGTAEVVF+RR DA++AVK+Y+NV LDGKPMKI+I+GTNI TP V P NG
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP-APNG 179
Query: 919 AIGIANGAPRSIGPVRSFV------XXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDK 758
AIG NG PRS G R GE VSA LDADL+K
Sbjct: 180 AIGNFNGVPRS-GQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEK 238
Query: 757 YHAEVMQTN 731
YHAE MQ N
Sbjct: 239 YHAEAMQLN 247
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 247 bits (630), Expect = 1e-62
Identities = 134/239 (56%), Positives = 160/239 (66%), Gaps = 3/239 (1%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXRFPIRSANRSAPYSVG-KAPESAW 1265
M++ LDMSLDD+IK+N+KS + RFP R+ANR+APYS +AP++ W
Sbjct: 1 MTNPLDMSLDDLIKSNRKSGLTRTRPPLNSGNGPSRRFPNRAANRTAPYSKPVQAPDTTW 60
Query: 1264 QHDMY--SAVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINYD 1091
QHDM+ GFP+ RASSIETGTKLYISNL+YGVSNEDIKELFSEVGD+KRYS++YD
Sbjct: 61 QHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKRYSVHYD 120
Query: 1090 RSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAIG 911
RSGRSKGTAEVVF+RR DA A K+Y+ V LDGKPMKI+I+GTN+ TP +P +NG
Sbjct: 121 RSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPATNGKFA 180
Query: 910 IANGAPRSIGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKYHAEVMQT 734
NG PRS SF GE VSA LDADL+ YH E MQT
Sbjct: 181 NPNGVPRSGQGRGSFSGRSRGPGRGARRGRGQGRGQGEKVSAEDLDADLENYHKEAMQT 239
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 246 bits (628), Expect = 2e-62
Identities = 141/247 (57%), Positives = 164/247 (66%), Gaps = 10/247 (4%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
MSSAL+MSLDD+IK N+KS R FP R ANRS PY+ KAPE+ W
Sbjct: 1 MSSALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGPARRFPNRGANRSGPYTAAKAPETTW 60
Query: 1264 QHDMYSAVG--FPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINYD 1091
QHDMYS G F RAS+IETGTKLYISNL+YGVSN+DIKELF+EVGDLKR++I+YD
Sbjct: 61 QHDMYSDKGAAFQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRFTIHYD 120
Query: 1090 RSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAIG 911
RSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTN+ TP P NGA G
Sbjct: 121 RSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPG-APSAGNGAFG 179
Query: 910 IANGAPR-------SIGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKYH 752
+NGAPR G R GE VSA LDA+L+KYH
Sbjct: 180 NSNGAPRGGHGRGGGFGKQRG-----GGGGRGFGRGRGRGKGRGEKVSAEDLDAELEKYH 234
Query: 751 AEVMQTN 731
+E MQTN
Sbjct: 235 SEAMQTN 241
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 247
Score = 244 bits (623), Expect = 7e-62
Identities = 145/248 (58%), Positives = 162/248 (65%), Gaps = 11/248 (4%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKK-SNVXXXXXXXXXXXXXXXRFPIRSANRSAPYSVGKAPESAW 1265
MSSALDMSLDDIIK+NKK + RF R NR+APY+ KAPES W
Sbjct: 1 MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTW 60
Query: 1264 QHDMYSAVGFPAPT-------ARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 1106
QHDM++ G +RAS IETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY
Sbjct: 61 QHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 120
Query: 1105 SINYDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLS 926
SI+YDRSGRSKGTAEVVF+RR DALAAVK+Y+NV LDGKPMKI+I+GTNI TP P +
Sbjct: 121 SIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATP-AA 179
Query: 925 NGAIGIANGAPR---SIGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKY 755
NG G +NGAPR G GE VSA LDADL+KY
Sbjct: 180 NGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKY 239
Query: 754 HAEVMQTN 731
H+E MQTN
Sbjct: 240 HSEAMQTN 247
>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 241 bits (615), Expect = 6e-61
Identities = 140/247 (56%), Positives = 163/247 (65%), Gaps = 10/247 (4%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKS-NVXXXXXXXXXXXXXXXRFPIRSANRSAPYSVGKAPESAW 1265
MS+ALDM+LDDIIKNNKKS + R P R+ NR APY+ KAPESAW
Sbjct: 1 MSAALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLPNRAGNRPAPYAAAKAPESAW 60
Query: 1264 QHDMYS----AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSIN 1097
QHDMY+ A F RASSIETGTKLYISNL+YGVSN+DIKELF EVGDLKR++++
Sbjct: 61 QHDMYADQGVATAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH 120
Query: 1096 YDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGA 917
YDRSGRSKGTAEVVF+RR DA+AAVK+Y NV LDGKPMK++I+GTNI T VP + NG
Sbjct: 121 YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAVPPV-NGT 179
Query: 916 IGIANGAPRSIGPVRSFVXXXXXXXXXXXXXXXXXXXXG-----EPVSAAALDADLDKYH 752
G + G PRS G RS + E VSA LDA+L+KYH
Sbjct: 180 FGNSGGPPRS-GQGRSGLLGRPRGAPRGRGSSRRGRGGRGRDRDEKVSAEDLDAELEKYH 238
Query: 751 AEVMQTN 731
AE MQ N
Sbjct: 239 AEAMQLN 245
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 239 bits (609), Expect = 3e-60
Identities = 143/248 (57%), Positives = 162/248 (65%), Gaps = 11/248 (4%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
MSSALDMSLDDIIKNNKKS R P R ANR APY+ KAPE+ W
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTAKAPETTW 60
Query: 1264 QHDMYS--AVGFPAPTA-RASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINY 1094
QHDM++ FP A RAS+IETGTKLYISNL+YGVSNEDIKELFSEVGDLKRYSI+Y
Sbjct: 61 QHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 120
Query: 1093 DRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAI 914
DRSGRSKGTAEVV++RR DA+AAVK+Y+NV LDGKPMKI+I+GTNI T T P +N
Sbjct: 121 DRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAP-AANVNF 179
Query: 913 GIANGAPRS----IGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKYH-- 752
G +NG PR G R E +SA LDADLDKY+
Sbjct: 180 GNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKYYSE 239
Query: 751 -AEVMQTN 731
+E MQTN
Sbjct: 240 ASEAMQTN 247
>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 238 bits (608), Expect = 4e-60
Identities = 135/241 (56%), Positives = 158/241 (65%), Gaps = 4/241 (1%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR--FPIRSANRSAPYSVGKAPESA 1268
M+ LDMSLDDIIKNNKKS F R NR+ PYS KAPE+A
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETA 60
Query: 1267 WQHDMYSAVG--FPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINY 1094
W HDM+ G +P+ RAS+IETGTKLY+SNL+YGVSNEDIKELFSEVGD+KRYSINY
Sbjct: 61 WSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINY 120
Query: 1093 DRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAI 914
D+SGRSKGTAE+VF+R+ DALAA+K+Y+NV LDGKPMK++I+GTNI TP VP SN +
Sbjct: 121 DKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTP-AVPAPSNASF 179
Query: 913 GIANGAPRSIGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKYHAEVMQT 734
G NG PR R+ GE +SA LDADLDKYH E MQ
Sbjct: 180 GNPNGFPRG---GRAMGRNRGGGRGRSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQI 236
Query: 733 N 731
N
Sbjct: 237 N 237
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 238 bits (606), Expect = 7e-60
Identities = 140/250 (56%), Positives = 161/250 (64%), Gaps = 13/250 (5%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKK--SNVXXXXXXXXXXXXXXXRFPIRSANRSAPYSVG-KAPES 1271
MS L MSLDDIIK NKK S R P R+ NR+APY+ KAPE+
Sbjct: 1 MSDPLSMSLDDIIKTNKKTGSGNPRGRGRLSGGPGPARRVPNRAPNRAAPYAAAPKAPET 60
Query: 1270 AWQHDMYSAVG--FPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSIN 1097
WQHDMY G F A RAS+I+TGTKLYISNLEYGVSNEDIKELFSEVGDLKRY+I+
Sbjct: 61 TWQHDMYMDQGTAFAAQAGRASAIQTGTKLYISNLEYGVSNEDIKELFSEVGDLKRYAIH 120
Query: 1096 YDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGA 917
YDRSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTN+ TP P +NG+
Sbjct: 121 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNVATPAAPPPPANGS 180
Query: 916 IGIANGAPR--------SIGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLD 761
G +NG PR + G R GE +SA LDADL+
Sbjct: 181 FGNSNGLPRGGQGRGGGAFGRPRG--GGGGGRGPRRGRGRGQGRGTGEKISADDLDADLE 238
Query: 760 KYHAEVMQTN 731
KYHAE MQ N
Sbjct: 239 KYHAEAMQEN 248
>ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solanum lycopersicum]
Length = 251
Score = 237 bits (604), Expect = 1e-59
Identities = 143/251 (56%), Positives = 163/251 (64%), Gaps = 16/251 (6%)
Frame = -3
Query: 1435 SALDMSLDDIIKNNK-----KSNVXXXXXXXXXXXXXXXRFPIRSANRSAPYSVGKAPES 1271
+ALDM+LDD+IK NK K R P RSANR+APYS+ KAP++
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGRGAASTSSAGPSRRVPNRSANRAAPYSIAKAPQA 63
Query: 1270 AWQHDMYSA---VGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSI 1100
+W HDM+ A V F RASSIETGTKLYISNL+YGVSNEDIKELFSE+GDLKRY++
Sbjct: 64 SWNHDMFEADQAVAFGQAGGRASSIETGTKLYISNLDYGVSNEDIKELFSEIGDLKRYAV 123
Query: 1099 NYDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNG 920
+YDRSGRSKGTAEVVF+RR DALA VK+++NV LDGKPMKI+I+GTNI TPT SNG
Sbjct: 124 HYDRSGRSKGTAEVVFSRRQDALAGVKRFNNVQLDGKPMKIEIVGTNIVTPTA--PFSNG 181
Query: 919 AIGIA--NGAPRSIGPVR------SFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADL 764
A G NGAPRS G VR S GE VSA LDADL
Sbjct: 182 AFGFGDTNGAPRS-GQVRGGGFGRSRGGRGRDRGFRGGNRGWGRGGRGEKVSAEDLDADL 240
Query: 763 DKYHAEVMQTN 731
KYH E MQTN
Sbjct: 241 MKYHTEAMQTN 251
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 237 bits (604), Expect = 1e-59
Identities = 135/244 (55%), Positives = 163/244 (66%), Gaps = 7/244 (2%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
MS+ALDM+L+DIIKNNKKS++ R P R+ANR+APY+ KAPE+AW
Sbjct: 1 MSAALDMTLEDIIKNNKKSSLANTRGRGRASGPGPARRLPNRAANRAAPYAAAKAPETAW 60
Query: 1264 QHDMYS--AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINYD 1091
+HDMY+ V P RASSIETGTKLYISNL+YGVSN+DIKELF EVGD+KR++++YD
Sbjct: 61 KHDMYANQPVAAAYPGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKRHTVHYD 120
Query: 1090 RSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAIG 911
RSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMK++I+GTNI T P + NG G
Sbjct: 121 RSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHAAPPAV-NGTFG 179
Query: 910 IANGAPRS----IGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKYHAEV 743
G PRS G + E VSA LDADL+KYHAE
Sbjct: 180 NPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADLEKYHAEA 239
Query: 742 MQTN 731
MQ N
Sbjct: 240 MQLN 243
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 236 bits (603), Expect = 2e-59
Identities = 142/248 (57%), Positives = 161/248 (64%), Gaps = 11/248 (4%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
MSSALDMSLDDIIKNNKKS R P R ANR APY+ KAPE+ W
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTAKAPETTW 60
Query: 1264 QHDMYS--AVGFPAPTA-RASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINY 1094
QHDM++ FP A RAS+IETGTKLYISNL+YGVSNEDIKELFSEVGDLKRYSI+Y
Sbjct: 61 QHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 120
Query: 1093 DRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAI 914
DRSGRSKGTAEVV++RR DA+AAVK+Y+ V LDGKPMKI+I+GTNI T T P +N
Sbjct: 121 DRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAAP-AANVNF 179
Query: 913 GIANGAPRS----IGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKYH-- 752
G +NG PR G R E +SA LDADLDKY+
Sbjct: 180 GNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKYYSE 239
Query: 751 -AEVMQTN 731
+E MQTN
Sbjct: 240 ASEAMQTN 247
>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 236 bits (603), Expect = 2e-59
Identities = 123/190 (64%), Positives = 143/190 (75%), Gaps = 4/190 (2%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR--FPIRSANRSAPYSVGKAPESA 1268
MS+ALDMSLDD+IKNNK+S P R ANR PYSV KAPE+
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETT 60
Query: 1267 WQHDMYS--AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINY 1094
WQHDM++ A +PA R S+IETGTKLYISNL+YGVSNEDIKELFSEVGDLKRYSI+Y
Sbjct: 61 WQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 120
Query: 1093 DRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAI 914
DRSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTNI TP VP ++NG
Sbjct: 121 DRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGTF 180
Query: 913 GIANGAPRSI 884
G +NG R +
Sbjct: 181 GNSNGGLRRL 190
>gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
Length = 252
Score = 236 bits (602), Expect = 2e-59
Identities = 137/251 (54%), Positives = 163/251 (64%), Gaps = 16/251 (6%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
M L+MSLDD+IK +KKS R P R+ANR+ PY+ KAPE+AW
Sbjct: 1 MQDPLNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNRAANRTTPYAAAKAPETAW 60
Query: 1264 QHDMYS---AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINY 1094
QHD+Y+ A FPA RAS+IETGTKLYISNL+YGVSNEDIKELFSEVGDLKRY ++Y
Sbjct: 61 QHDLYTDQGAAAFPAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGVHY 120
Query: 1093 DRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPT---PTVVPQLSN 923
DRSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTNI T P +P +N
Sbjct: 121 DRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTLPPAAN 180
Query: 922 GAIGIANGAPR-------SIGPVR--SFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDA 770
G G +NG PR + G +R GE VSA LDA
Sbjct: 181 GNFGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSAEDLDA 240
Query: 769 DLDKYHAEVMQ 737
+L+KYHAE MQ
Sbjct: 241 ELEKYHAEAMQ 251
>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 236 bits (602), Expect = 2e-59
Identities = 139/244 (56%), Positives = 162/244 (66%), Gaps = 7/244 (2%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR-FPIRSANRSAPYSVGKAPESAW 1265
M++ LDMSLDDIIKNNKKS R FP R+ANR+ PYS KAPE+ W
Sbjct: 1 MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRT-PYSAPKAPETTW 59
Query: 1264 QHDMYS--AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINYD 1091
QHDM++ + GF RAS+I+TGTKLYISNL+YGVSNEDIKELFSEVGD+KR+ I+YD
Sbjct: 60 QHDMFADPSSGFLVQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYD 119
Query: 1090 RSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAIG 911
+SGRSKGTAEVVF+RRLDA+AAVKKY+NV LDGKPMKI+I+GTNI TP V P +
Sbjct: 120 KSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFE 179
Query: 910 IANGAPRSI----GPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDADLDKYHAEV 743
+NGAPR GP E VSA LDADL+KYHAE
Sbjct: 180 NSNGAPRRQQGRGGP------PSRQRGHGFGRGRGRGRGPSEKVSAEDLDADLEKYHAES 233
Query: 742 MQTN 731
MQ N
Sbjct: 234 MQIN 237
>ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
Length = 257
Score = 233 bits (595), Expect = 1e-58
Identities = 136/259 (52%), Positives = 162/259 (62%), Gaps = 22/259 (8%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXRFPIRSANRSAPYSVGKAPESAWQ 1262
MS+ALDM+L+DIIKNNKKS R P R +N +APYS KAPE+ WQ
Sbjct: 1 MSAALDMTLEDIIKNNKKSGSGNPRGRSRPGPGPARRLPNRVSNHAAPYSAAKAPETTWQ 60
Query: 1261 HDMYS-----AVGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSIN 1097
HD+Y+ A + A RA SIETGTKLYISNL+Y VSN+DIKELFSEVGDLKR+ ++
Sbjct: 61 HDLYADQPVAAAAYSAQGGRAPSIETGTKLYISNLDYAVSNDDIKELFSEVGDLKRHGVH 120
Query: 1096 YDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGA 917
YDRSGRSKGTAEVVF+RR DA+AAVK+Y+NV LDGKPMKI+I+GTNI TP V P + NGA
Sbjct: 121 YDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPAV-NGA 179
Query: 916 IGIANGAPRSIGPVRSFV-----------------XXXXXXXXXXXXXXXXXXXXGEPVS 788
IG NG P+S G R + VS
Sbjct: 180 IGNFNGIPQS-GQGRGGALRGPGGRGQGIRRNQGRGRGSGGGRGGGRGGGRGGGRDQKVS 238
Query: 787 AAALDADLDKYHAEVMQTN 731
A LDA+L++YHAE MQ N
Sbjct: 239 AEDLDAELERYHAEAMQIN 257
>ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solanum tuberosum]
Length = 254
Score = 233 bits (594), Expect = 2e-58
Identities = 141/253 (55%), Positives = 161/253 (63%), Gaps = 18/253 (7%)
Frame = -3
Query: 1435 SALDMSLDDIIKNNK-----KSNVXXXXXXXXXXXXXXXRFPIRSANRSAPYSVGKAPES 1271
+ALDM+LDD+IK NK K RFP RSANR+APYS KAPE+
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGCGAASTSSAGPSRRFPNRSANRAAPYSTAKAPEA 63
Query: 1270 AWQHDMYSA---VGFPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSI 1100
+W HDM++A V F RASSIETGTKLYISNL+YGVS EDIKELFSE+GDLKRY++
Sbjct: 64 SWNHDMFAADQAVAFGQAGGRASSIETGTKLYISNLDYGVSKEDIKELFSEIGDLKRYAV 123
Query: 1099 NYDRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNG 920
+YDRSGRSKGT EVVF+RR D LA VK+++NV LDGKPMKI+I+GTNI TPT SNG
Sbjct: 124 HYDRSGRSKGTTEVVFSRRQDTLAGVKRFNNVQLDGKPMKIEIVGTNIVTPTA--PFSNG 181
Query: 919 AIGIA--NGAPR--SIGPVR------SFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALDA 770
A G NGAPR + G VR S GE VSA LDA
Sbjct: 182 AFGFGDTNGAPRRYAFGQVRGGGFGRSRGARGRGRGFRGGNRGWGRGGRGEKVSAEDLDA 241
Query: 769 DLDKYHAEVMQTN 731
DL KYH E MQTN
Sbjct: 242 DLMKYHTEAMQTN 254
>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding protein
2-like [Cucumis sativus]
Length = 248
Score = 232 bits (592), Expect = 3e-58
Identities = 136/254 (53%), Positives = 158/254 (62%), Gaps = 17/254 (6%)
Frame = -3
Query: 1441 MSSALDMSLDDIIKNNKKSNVXXXXXXXXXXXXXXXR--FPIRSANRSAPYSVGKAPESA 1268
M+ LDMSLDDIIKNNKKS F R NR+ PYS KAPE+A
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETA 60
Query: 1267 WQHDMYSAVG--FPAPTARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINY 1094
W HDM+ G +P+ RAS+IETGTKLY+SNL+YGVSNEDIKELFSEVGD+KRYSINY
Sbjct: 61 WSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINY 120
Query: 1093 DRSGRSKGTAEVVFARRLDALAAVKKYDNVLLDGKPMKIDIIGTNIPTPTVVPQLSNGAI 914
D+SGRSKGTAE+ F+R+ DALAA+K+Y+NV LDGKPMK++I+GTNI TP V P SN +
Sbjct: 121 DKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAV-PAPSNASF 179
Query: 913 GIANGAPRS-------------IGPVRSFVXXXXXXXXXXXXXXXXXXXXGEPVSAAALD 773
G NG PR GP R GE +SA LD
Sbjct: 180 GNPNGFPRGGRAMGRNRGGGRGRGPGRG-----RGRGRGSGSGSGSGRGHGEKLSAEDLD 234
Query: 772 ADLDKYHAEVMQTN 731
ADLDKYH E MQ N
Sbjct: 235 ADLDKYHEEAMQIN 248