BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00002722
         (1561 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA h...   660   0.0  
ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japonica Group] g...   660   0.0  
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   654   0.0  
ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   652   0.0  
ref|XP_004165586.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   652   0.0  
ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   659   0.0  
ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...   670   0.0  
gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indi...   660   0.0  
ref|XP_003563192.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   654   0.0  
ref|XP_003563193.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   654   0.0  
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr...   657   0.0  
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr...   657   0.0  
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   657   0.0  
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   657   0.0  
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   657   0.0  
gb|EMS52116.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas...   650   0.0  
dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum vulgare subs...   649   0.0  
gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]                    652   0.0  
gb|AFW67097.1| putative DEAD-box ATP-dependent RNA helicase fami...   651   0.0  
tpg|DAA52300.1| TPA: putative DEAD-box ATP-dependent RNA helicas...   651   0.0  

>sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 3, chloroplastic;
            Flags: Precursor gi|18855061|gb|AAL79753.1|AC096687_17
            putative RNA helicase [Oryza sativa Japonica Group]
          Length = 758

 Score =  660 bits (1703), Expect(2) = 0.0
 Identities = 332/397 (83%), Positives = 365/397 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 217  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 276

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 277  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 336

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 337  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 396

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 397  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 456

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 457  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 516

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 517  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 576

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+
Sbjct: 577  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLS 613



 Score =  125 bits (313), Expect(2) = 0.0
 Identities = 60/81 (74%), Positives = 73/81 (90%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D+DELA+++LGLP+QLVS LEKRGIT+LFPIQRAVLIP L+GRDLIARAKTGTGKTLAFG
Sbjct: 100 DEDELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFG 159

Query: 251 IPIIKRLTEDDEAEGRKRSRL 313
           IP+IK+L E+D+    +R R+
Sbjct: 160 IPMIKQLMEEDDGRSVRRGRI 180


>ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japonica Group]
            gi|113550244|dbj|BAF13687.1| Os03g0827700, partial [Oryza
            sativa Japonica Group]
          Length = 723

 Score =  660 bits (1703), Expect(2) = 0.0
 Identities = 332/397 (83%), Positives = 365/397 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 182  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 241

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 242  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 301

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 302  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 361

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 362  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 421

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 422  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 481

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 482  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 541

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+
Sbjct: 542  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLS 578



 Score =  125 bits (313), Expect(2) = 0.0
 Identities = 60/81 (74%), Positives = 73/81 (90%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D+DELA+++LGLP+QLVS LEKRGIT+LFPIQRAVLIP L+GRDLIARAKTGTGKTLAFG
Sbjct: 65  DEDELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFG 124

Query: 251 IPIIKRLTEDDEAEGRKRSRL 313
           IP+IK+L E+D+    +R R+
Sbjct: 125 IPMIKQLMEEDDGRSVRRGRI 145


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  654 bits (1688), Expect(2) = 0.0
 Identities = 331/396 (83%), Positives = 360/396 (90%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +Y  Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQML+ GFEEDVEVI
Sbjct: 233  SYITQRNALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVI 292

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+ LP +RQ+MLFSATMP WVKKL+R+YL+NPL IDLVGDQ+EKLAEGIKLYAIST ATS
Sbjct: 293  LENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATS 352

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KR+ILSDL+TVYAKGGKTI+FTQTKRDADEVSM L+NSIASEALHGDISQHQRERTL GF
Sbjct: 353  KRSILSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGF 412

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG A+LMFTS
Sbjct: 413  RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTS 472

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTVKSLERDVGCRFEFVSPP  +EVLESSAEQV+ATL GVH +S+ +F PTAQRL +
Sbjct: 473  SQRRTVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGFFTPTAQRLIE 532

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            EQGT          SGFSQPPSSRSLISHEQGW TLQLTR+P YSRG+ SARSVTGFLSD
Sbjct: 533  EQGTSALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLSARSVTGFLSD 592

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VY  AADEVGKI +IADEKVQGAVFDLPEEIAKELL
Sbjct: 593  VYTAAADEVGKIHIIADEKVQGAVFDLPEEIAKELL 628



 Score =  128 bits (322), Expect(2) = 0.0
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D DELA+SKLGLPQ+LV  LEKRGIT+LFPIQRAVL+P LEGRDLIARAKTGTGKTLAFG
Sbjct: 116 DDDELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFG 175

Query: 251 IPIIKRLTEDDEAEGRKRSRL 313
           IPIIK +TEDD++  R+  RL
Sbjct: 176 IPIIKCITEDDKSSQRRTGRL 196


>ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Cucumis sativus]
          Length = 748

 Score =  652 bits (1682), Expect(2) = 0.0
 Identities = 327/396 (82%), Positives = 361/396 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +Y  Q+N+LSRGVDVVVGTPGR+IDLIN +SL LGEV+YLVLDEADQMLAVGFEEDVEVI
Sbjct: 226  SYITQQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVI 285

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+KLP QRQNMLFSATMP WVKKL+R+YL+NPLTIDLVGDQDEKLAEGIKL+AI TTATS
Sbjct: 286  LEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATS 345

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            K+TIL DL+TVYAKGGKTIVFTQTKRDADEVS+AL+NSI SEALHGDISQHQRERTL GF
Sbjct: 346  KQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGF 405

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG AILMFT+
Sbjct: 406  RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTN 465

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGC+FEF +PP M+EVL+SSAEQVV TLRGVH +SI+YF PTAQ+L D
Sbjct: 466  SQRRTVRSLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLID 525

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            EQG           SGF+ PPSSRSLI+HEQGWVTLQLTR+P YSRG+ SARSVTGFLSD
Sbjct: 526  EQGLGALAAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD 585

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VY  AADE+GKI +IADE++ GAVFDLPEEIAKELL
Sbjct: 586  VYSPAADEIGKIHLIADERINGAVFDLPEEIAKELL 621



 Score =  130 bits (327), Expect(2) = 0.0
 Identities = 66/84 (78%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
 Frame = +2

Query: 65  AADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLA 244
           AAD DELA+SKL LPQ+L   L+KRGIT+LFPIQRAVL+P LEGRDLIARAKTGTGKTLA
Sbjct: 106 AADDDELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLA 165

Query: 245 FGIPIIKRLTEDDEAEG-RKRSRL 313
           FGIPI+K+LTEDDE+   R+RSRL
Sbjct: 166 FGIPILKKLTEDDESRSLRRRSRL 189


>ref|XP_004165586.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like,
            partial [Cucumis sativus]
          Length = 726

 Score =  652 bits (1682), Expect(2) = 0.0
 Identities = 327/396 (82%), Positives = 361/396 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +Y  Q+N+LSRGVDVVVGTPGR+IDLIN +SL LGEV+YLVLDEADQMLAVGFEEDVEVI
Sbjct: 226  SYITQQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVI 285

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+KLP QRQNMLFSATMP WVKKL+R+YL+NPLTIDLVGDQDEKLAEGIKL+AI TTATS
Sbjct: 286  LEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATS 345

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            K+TIL DL+TVYAKGGKTIVFTQTKRDADEVS+AL+NSI SEALHGDISQHQRERTL GF
Sbjct: 346  KQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGF 405

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG AILMFT+
Sbjct: 406  RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTN 465

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGC+FEF +PP M+EVL+SSAEQVV TLRGVH +SI+YF PTAQ+L D
Sbjct: 466  SQRRTVRSLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLID 525

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            EQG           SGF+ PPSSRSLI+HEQGWVTLQLTR+P YSRG+ SARSVTGFLSD
Sbjct: 526  EQGLGALAAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD 585

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VY  AADE+GKI +IADE++ GAVFDLPEEIAKELL
Sbjct: 586  VYSPAADEIGKIHLIADERINGAVFDLPEEIAKELL 621



 Score =  130 bits (327), Expect(2) = 0.0
 Identities = 66/84 (78%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
 Frame = +2

Query: 65  AADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLA 244
           AAD DELA+SKL LPQ+L   L+KRGIT+LFPIQRAVL+P LEGRDLIARAKTGTGKTLA
Sbjct: 106 AADDDELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLA 165

Query: 245 FGIPIIKRLTEDDEAEG-RKRSRL 313
           FGIPI+K+LTEDDE+   R+RSRL
Sbjct: 166 FGIPILKKLTEDDESRSLRRRSRL 189


>ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Setaria italica]
          Length = 759

 Score =  659 bits (1701), Expect(2) = 0.0
 Identities = 336/396 (84%), Positives = 362/396 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 208  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 267

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  TATS
Sbjct: 268  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTATS 327

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 328  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 387

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 388  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKVGTAILMFTS 447

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQ+RTVKSLERDVGC+FEF+SPPSM+EVLESSAE V+ATLRGVH +S Q+FL  A+RLT+
Sbjct: 448  SQKRTVKSLERDVGCKFEFISPPSMEEVLESSAEHVIATLRGVHPESTQFFLGAAERLTE 507

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G+          SGFSQPPSSRSLISHEQGWVTLQLTR+PG+ RG+FS RSVTGFLSD
Sbjct: 508  ELGSHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGFGRGFFSPRSVTGFLSD 567

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LL
Sbjct: 568  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLL 603



 Score =  121 bits (304), Expect(2) = 0.0
 Identities = 60/93 (64%), Positives = 74/93 (79%)
 Frame = +2

Query: 35  DFGVWNSHNQAADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIAR 214
           D G+        D++ELA+++LGLP +LV+ LEKRGIT+LFPIQRAVLIP LEGRDLIAR
Sbjct: 79  DEGLEAGEGFQGDEEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPALEGRDLIAR 138

Query: 215 AKTGTGKTLAFGIPIIKRLTEDDEAEGRKRSRL 313
           AKTGTGKTLAFGIP+IKRL  +D+    +R R+
Sbjct: 139 AKTGTGKTLAFGIPMIKRLMGEDDGRSTRRGRI 171


>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
            gi|548843569|gb|ERN03223.1| hypothetical protein
            AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score =  670 bits (1729), Expect(2) = 0.0
 Identities = 336/397 (84%), Positives = 369/397 (92%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YNIQ+N+L+RGVDVVVGTPGRIIDL+N +SL+LGEVQYLVLDEADQMLAVGFEEDVEVI
Sbjct: 238  SYNIQQNALTRGVDVVVGTPGRIIDLVNGNSLQLGEVQYLVLDEADQMLAVGFEEDVEVI 297

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+KLP  RQ+MLFSATMPGWVKKL+R+YL+NP+TIDLVGDQ+EKLAEGIKLYAI TTAT+
Sbjct: 298  LEKLPTGRQSMLFSATMPGWVKKLARKYLDNPMTIDLVGDQEEKLAEGIKLYAIPTTATT 357

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTIL DLITVYAKGGKTIVFTQTKRDADEVS+AL++SI SEALHGDISQHQRERTL GF
Sbjct: 358  KRTILGDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGF 417

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFT 
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTG 477

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRT+KSLERDVGC FEF+SPP M+EVLESSAEQVVATL+GVH +SIQ+FLP AQR+ +
Sbjct: 478  SQRRTIKSLERDVGCSFEFISPPQMEEVLESSAEQVVATLKGVHPESIQFFLPAAQRMIE 537

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            EQGT          SGFSQPPSSRSL++HEQGWVTLQLTRE G+SRG+ SARSVTGFLSD
Sbjct: 538  EQGTDALAAALAHLSGFSQPPSSRSLVTHEQGWVTLQLTREQGFSRGFLSARSVTGFLSD 597

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            +YP AADEVGKI +IADE+VQGAVFDLPEEIAKELLT
Sbjct: 598  IYPAAADEVGKIHLIADERVQGAVFDLPEEIAKELLT 634



 Score =  108 bits (270), Expect(2) = 0.0
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = +2

Query: 59  NQAADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKT 238
           ++A++++ LA+  LGL ++LV  L KRGIT+LFPIQRAVL+P LEGRD+I RAKTGTGKT
Sbjct: 119 SEASNEENLAIGNLGLREELVDALAKRGITHLFPIQRAVLVPALEGRDIIGRAKTGTGKT 178

Query: 239 LAFGIPIIKRLTEDDEAEGRKRSRL 313
           LAF IPIIKRL  DDE     R RL
Sbjct: 179 LAFAIPIIKRL--DDEGRSPSRGRL 201


>gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indica Group]
          Length = 779

 Score =  660 bits (1703), Expect(2) = 0.0
 Identities = 332/397 (83%), Positives = 365/397 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 238  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 297

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 298  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 357

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 358  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 417

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 477

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 478  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 537

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 538  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 597

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+
Sbjct: 598  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLS 634



 Score =  115 bits (288), Expect(2) = 0.0
 Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 14/95 (14%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQ--------------RAVLIPVLEGRDLI 208
           D+DELA+++LGLP+QLVS LEKRGIT+LFPIQ              RAVLIP L+GRDLI
Sbjct: 107 DEDELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPALDGRDLI 166

Query: 209 ARAKTGTGKTLAFGIPIIKRLTEDDEAEGRKRSRL 313
           ARAKTGTGKTLAFGIP+IK+L E+D+    +R R+
Sbjct: 167 ARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRI 201


>ref|XP_003563192.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform 1 [Brachypodium distachyon]
          Length = 769

 Score =  654 bits (1686), Expect(2) = 0.0
 Identities = 331/397 (83%), Positives = 363/397 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 207  SYNVQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 266

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T TS
Sbjct: 267  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTVTS 326

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 327  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTASIASEALHGDISQHQRERTLNGF 386

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 387  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTN 446

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            +QRRTVKSLERDVGCRFEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL++
Sbjct: 447  NQRRTVKSLERDVGCRFEFIGPPTMEEVLDSSAEHVIATLRGVHQESIQYFIPAAERLSE 506

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 507  ELGPNALATALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPAYARGFFSPRSVTGFLSD 566

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V P AADEVGKI +IADE+VQGAVFDLPEEIAK LL+
Sbjct: 567  VSPAAADEVGKIYLIADERVQGAVFDLPEEIAKNLLS 603



 Score =  121 bits (303), Expect(2) = 0.0
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D++ELA+++LGLP QLV+ LEKRGIT+LFPIQRAVLIP LEGRDLIARAKTGTGKTLAFG
Sbjct: 90  DEEELAIARLGLPDQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFG 149

Query: 251 IPIIKRLTEDDEAEGRKRSRL 313
           IP+IK++ E DE     R R+
Sbjct: 150 IPMIKQIIEQDEGRSLGRGRI 170


>ref|XP_003563193.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform 2 [Brachypodium distachyon]
          Length = 749

 Score =  654 bits (1686), Expect(2) = 0.0
 Identities = 331/397 (83%), Positives = 363/397 (91%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 207  SYNVQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 266

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T TS
Sbjct: 267  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTVTS 326

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 327  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTASIASEALHGDISQHQRERTLNGF 386

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 387  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTN 446

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            +QRRTVKSLERDVGCRFEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL++
Sbjct: 447  NQRRTVKSLERDVGCRFEFIGPPTMEEVLDSSAEHVIATLRGVHQESIQYFIPAAERLSE 506

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 507  ELGPNALATALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPAYARGFFSPRSVTGFLSD 566

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V P AADEVGKI +IADE+VQGAVFDLPEEIAK LL+
Sbjct: 567  VSPAAADEVGKIYLIADERVQGAVFDLPEEIAKNLLS 603



 Score =  121 bits (303), Expect(2) = 0.0
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D++ELA+++LGLP QLV+ LEKRGIT+LFPIQRAVLIP LEGRDLIARAKTGTGKTLAFG
Sbjct: 90  DEEELAIARLGLPDQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFG 149

Query: 251 IPIIKRLTEDDEAEGRKRSRL 313
           IP+IK++ E DE     R R+
Sbjct: 150 IPMIKQIIEQDEGRSLGRGRI 170


>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|557525870|gb|ESR37176.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 780

 Score =  657 bits (1696), Expect(2) = 0.0
 Identities = 331/396 (83%), Positives = 367/396 (92%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELL 633



 Score =  117 bits (292), Expect(2) = 0.0
 Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +2

Query: 68  ADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAF 247
           +D+DELA+SKLGLP +L   LEKRGIT+LFPIQRAV  P L+GRDLIARAKTGTGKTLAF
Sbjct: 119 SDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAF 178

Query: 248 GIPIIKRLTED-DEAEGRKRSRL 313
           GIPI+KRLTE  ++A   +RSRL
Sbjct: 179 GIPILKRLTEGYEQAISLRRSRL 201


>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|567862566|ref|XP_006423937.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525869|gb|ESR37175.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525871|gb|ESR37177.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 779

 Score =  657 bits (1696), Expect(2) = 0.0
 Identities = 331/396 (83%), Positives = 367/396 (92%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELL 633



 Score =  117 bits (292), Expect(2) = 0.0
 Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +2

Query: 68  ADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAF 247
           +D+DELA+SKLGLP +L   LEKRGIT+LFPIQRAV  P L+GRDLIARAKTGTGKTLAF
Sbjct: 119 SDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAF 178

Query: 248 GIPIIKRLTED-DEAEGRKRSRL 313
           GIPI+KRLTE  ++A   +RSRL
Sbjct: 179 GIPILKRLTEGYEQAISLRRSRL 201


>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 768

 Score =  657 bits (1696), Expect(2) = 0.0
 Identities = 331/396 (83%), Positives = 367/396 (92%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELL 633



 Score =  117 bits (292), Expect(2) = 0.0
 Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +2

Query: 68  ADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAF 247
           +D+DELA+SKLGLP +L   LEKRGIT+LFPIQRAV  P L+GRDLIARAKTGTGKTLAF
Sbjct: 119 SDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAF 178

Query: 248 GIPIIKRLTED-DEAEGRKRSRL 313
           GIPI+KRLTE  ++A   +RSRL
Sbjct: 179 GIPILKRLTEGYEQAISLRRSRL 201


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 767

 Score =  657 bits (1696), Expect(2) = 0.0
 Identities = 331/396 (83%), Positives = 367/396 (92%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELL 633



 Score =  117 bits (292), Expect(2) = 0.0
 Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +2

Query: 68  ADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAF 247
           +D+DELA+SKLGLP +L   LEKRGIT+LFPIQRAV  P L+GRDLIARAKTGTGKTLAF
Sbjct: 119 SDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAF 178

Query: 248 GIPIIKRLTED-DEAEGRKRSRL 313
           GIPI+KRLTE  ++A   +RSRL
Sbjct: 179 GIPILKRLTEGYEQAISLRRSRL 201


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 766

 Score =  657 bits (1696), Expect(2) = 0.0
 Identities = 331/396 (83%), Positives = 367/396 (92%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELL 1556
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELL 633



 Score =  117 bits (292), Expect(2) = 0.0
 Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +2

Query: 68  ADQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAF 247
           +D+DELA+SKLGLP +L   LEKRGIT+LFPIQRAV  P L+GRDLIARAKTGTGKTLAF
Sbjct: 119 SDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAF 178

Query: 248 GIPIIKRLTED-DEAEGRKRSRL 313
           GIPI+KRLTE  ++A   +RSRL
Sbjct: 179 GIPILKRLTEGYEQAISLRRSRL 201


>gb|EMS52116.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Triticum
            urartu]
          Length = 884

 Score =  650 bits (1676), Expect(2) = 0.0
 Identities = 329/397 (82%), Positives = 361/397 (90%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 214  SYNTQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 273

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  T TS
Sbjct: 274  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTS 333

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 334  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGF 393

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 394  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTT 453

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            +QRRTVKSLERDVGC+FEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL+ 
Sbjct: 454  NQRRTVKSLERDVGCKFEFIGPPTMEEVLDSSAEHVIATLRGVHPESIQYFVPAAERLSQ 513

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 514  ELGPTALASALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPAYARGFFSPRSVTGFLSD 573

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V P AAD VGKI +IADE+VQGAVFDLPEEIAK+LLT
Sbjct: 574  VSPSAADAVGKIYLIADERVQGAVFDLPEEIAKDLLT 610



 Score =  121 bits (304), Expect(2) = 0.0
 Identities = 61/81 (75%), Positives = 69/81 (85%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D DELA+S+LGLP QLV+ LEKRGIT+LFPIQRAVLIP LEGRDLIARAKTGTGKTLAFG
Sbjct: 97  DADELAISRLGLPAQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFG 156

Query: 251 IPIIKRLTEDDEAEGRKRSRL 313
           IP+IK++ E DE     R R+
Sbjct: 157 IPMIKQIIEQDEGRTPGRGRI 177


>dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum vulgare subsp. vulgare]
            gi|326532610|dbj|BAK05234.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 764

 Score =  649 bits (1674), Expect(2) = 0.0
 Identities = 329/397 (82%), Positives = 361/397 (90%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 204  SYNTQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 263

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  T TS
Sbjct: 264  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTS 323

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 324  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGF 383

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 384  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTT 443

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            +QRRTVKSLERDVGC+FEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL+ 
Sbjct: 444  NQRRTVKSLERDVGCKFEFIGPPTMEEVLDSSAEHVIATLRGVHPESIQYFVPAAERLSQ 503

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 504  ELGPTALASALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPEYARGFFSPRSVTGFLSD 563

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V P AAD VGKI +IADE+VQGAVFDLPEEIAK+LLT
Sbjct: 564  VSPSAADAVGKIYLIADERVQGAVFDLPEEIAKDLLT 600



 Score =  122 bits (306), Expect(2) = 0.0
 Identities = 61/81 (75%), Positives = 70/81 (86%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D+DELA+S+LGLP QLV+ LEKRGIT+LFPIQRAVLIP LEGRDLIARAKTGTGKTLAFG
Sbjct: 87  DKDELAISRLGLPAQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFG 146

Query: 251 IPIIKRLTEDDEAEGRKRSRL 313
           IP+IK++ E DE     R R+
Sbjct: 147 IPMIKQIIEQDEGRTPGRGRI 167


>gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]
          Length = 744

 Score =  652 bits (1683), Expect(2) = 0.0
 Identities = 333/397 (83%), Positives = 359/397 (90%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 201  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 260

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  TATS
Sbjct: 261  LQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTATS 320

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRT+LSDLITVYAKGGKTIVFT+TK+DADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 321  KRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGF 380

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 381  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 440

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQ+RTVKSLERDVGC FEF+SPPS++EVLESSAE V+ATLRGVH +S +YFL  A++LT+
Sbjct: 441  SQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTE 500

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQGWVTLQLTRE G+ RG+FS RSVTGFLSD
Sbjct: 501  ELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSD 560

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT
Sbjct: 561  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLT 597



 Score =  118 bits (296), Expect(2) = 0.0
 Identities = 58/80 (72%), Positives = 69/80 (86%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D +ELA+++LGLP +LV+ LEKRGIT+LFPIQRAVLIP LEGRDLIARAKTGTGKTLAFG
Sbjct: 84  DNEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFG 143

Query: 251 IPIIKRLTEDDEAEGRKRSR 310
           IP+IK+L E D+    +R R
Sbjct: 144 IPMIKQLIEQDDGRITRRGR 163


>gb|AFW67097.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 745

 Score =  651 bits (1680), Expect(2) = 0.0
 Identities = 333/397 (83%), Positives = 359/397 (90%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 201  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 260

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  TATS
Sbjct: 261  LQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTATS 320

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRTILSDLITVYAKGGKTIVFT+TK+DADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 321  KRTILSDLITVYAKGGKTIVFTRTKKDADEVSLALTTSIASEALHGDISQHQRERTLNGF 380

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 381  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 440

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQ+RTV SLERDVGC+FEF+SPPS++EVLESSAE V+ATLRGVH +S QYFL  A++LT+
Sbjct: 441  SQKRTVMSLERDVGCKFEFISPPSIEEVLESSAEHVIATLRGVHPESTQYFLGAAEKLTE 500

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLIS+EQGWVTLQLTREPGY RG+FS RSVTGFLSD
Sbjct: 501  ELGPHALASALAHLSGFSQPPSSRSLISYEQGWVTLQLTREPGYGRGFFSPRSVTGFLSD 560

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT
Sbjct: 561  VCSAAADEVGKIYITADENVQGAVFDLPEEIAKDLLT 597



 Score =  118 bits (295), Expect(2) = 0.0
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D++ELA+++LGLP +LV+ LEKRGIT+LFPIQRAVLIP L GRDLIARAKTGTGKTLAFG
Sbjct: 84  DEEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPALGGRDLIARAKTGTGKTLAFG 143

Query: 251 IPIIKRLTEDDEAEGRKRSR 310
           IP+IK+L E D+    +R R
Sbjct: 144 IPMIKQLMEQDDGRSTRRGR 163


>tpg|DAA52300.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 743

 Score =  651 bits (1679), Expect(2) = 0.0
 Identities = 332/397 (83%), Positives = 358/397 (90%)
 Frame = +3

Query: 369  AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 548
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 201  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 260

Query: 549  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 728
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T TS
Sbjct: 261  LQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTS 320

Query: 729  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 908
            KRT+LSDLITVYAKGGKTIVFT+TK+DADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 321  KRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGF 380

Query: 909  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 1088
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 381  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 440

Query: 1089 SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 1268
            SQ+RTVKSLERDVGC FEF+SPPS++EVLESSAE V+ATLRGVH +S +YFL  A++LT+
Sbjct: 441  SQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTE 500

Query: 1269 EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1448
            E G           SGFSQPPSSRSLISHEQGWVTLQLTRE G+ RG+FS RSVTGFLSD
Sbjct: 501  ELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSD 560

Query: 1449 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLT 1559
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT
Sbjct: 561  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLT 597



 Score =  118 bits (296), Expect(2) = 0.0
 Identities = 58/80 (72%), Positives = 69/80 (86%)
 Frame = +2

Query: 71  DQDELAVSKLGLPQQLVSILEKRGITNLFPIQRAVLIPVLEGRDLIARAKTGTGKTLAFG 250
           D +ELA+++LGLP +LV+ LEKRGIT+LFPIQRAVLIP LEGRDLIARAKTGTGKTLAFG
Sbjct: 84  DNEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFG 143

Query: 251 IPIIKRLTEDDEAEGRKRSR 310
           IP+IK+L E D+    +R R
Sbjct: 144 IPMIKQLIEQDDGRITRRGR 163