BLASTX nr result
ID: Zingiber25_contig00002370
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00002370
(266 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004961814.1| PREDICTED: nuclear transcription factor Y su... 72 6e-11
sp|Q60EQ4.2|NFYB3_ORYSJ RecName: Full=Nuclear transcription fact... 72 6e-11
dbj|BAC76332.1| HAP3 [Oryza sativa Japonica Group] 72 6e-11
gb|AAO72650.1| CCAAT-binding transcription factor-like protein [... 72 6e-11
ref|XP_006655386.1| PREDICTED: nuclear transcription factor Y su... 72 1e-10
ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y su... 72 1e-10
ref|XP_006644967.1| PREDICTED: nuclear transcription factor Y su... 71 2e-10
gb|AFO85383.1| nuclear factor YB2 [Sorghum bicolor] gi|398559775... 71 2e-10
sp|P25209.1|NFYB_MAIZE RecName: Full=Nuclear transcription facto... 70 4e-10
ref|NP_001105435.1| nuclear transcription factor Y subunit B [Ze... 69 9e-10
emb|CBH26150.1| CAAT-box DNA binding protein [Zea mays] gi|26211... 69 9e-10
ref|NP_001106052.1| transcription factor subunit NF-YB2 [Zea may... 69 9e-10
dbj|BAC76331.1| HAP3 [Oryza sativa Japonica Group] 68 1e-09
gb|AAQ01152.1| CCAAT-binding protein [Oryza sativa] 68 1e-09
ref|XP_004970483.1| PREDICTED: nuclear transcription factor Y su... 67 2e-09
ref|XP_004970482.1| PREDICTED: nuclear transcription factor Y su... 67 2e-09
dbj|BAK07867.1| predicted protein [Hordeum vulgare subsp. vulgar... 67 2e-09
ref|XP_002458721.1| hypothetical protein SORBIDRAFT_03g039000 [S... 67 2e-09
ref|NP_001141333.1| CAAT box binding protein1 [Zea mays] gi|1947... 67 2e-09
ref|XP_003564550.1| PREDICTED: nuclear transcription factor Y su... 67 3e-09
>ref|XP_004961814.1| PREDICTED: nuclear transcription factor Y subunit B-3-like isoform
X1 [Setaria italica] gi|514749262|ref|XP_004961815.1|
PREDICTED: nuclear transcription factor Y subunit
B-3-like isoform X2 [Setaria italica]
Length = 180
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK GD S+K+D+ +
Sbjct: 105 GFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSIKKDV--LGHGGASSSATQGMGQQGAY 162
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 163 NQGMGYMQPQ 172
>sp|Q60EQ4.2|NFYB3_ORYSJ RecName: Full=Nuclear transcription factor Y subunit B-3; AltName:
Full=OsNF-YB-3; AltName: Full=Transcriptional activator
HAP3B gi|215704747|dbj|BAG94775.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 185
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK GD S+K+D+ +
Sbjct: 110 GFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDV--LGSHGGSSSSAQGMGQQAAY 167
Query: 180 TQGMGYLQPQ*RRSEPCN 233
QGMGY+QPQ + N
Sbjct: 168 NQGMGYMQPQYHNGDVSN 185
>dbj|BAC76332.1| HAP3 [Oryza sativa Japonica Group]
Length = 167
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK GD S+K+D+ +
Sbjct: 92 GFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDV--LGSHGGSSSSAQGMGQQAAY 149
Query: 180 TQGMGYLQPQ*RRSEPCN 233
QGMGY+QPQ + N
Sbjct: 150 NQGMGYMQPQYHNGDVSN 167
>gb|AAO72650.1| CCAAT-binding transcription factor-like protein [Oryza sativa
Japonica Group]
Length = 152
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK GD S+K+D+ +
Sbjct: 77 GFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDV--LGSHGGSSSSAQGMGQQAAY 134
Query: 180 TQGMGYLQPQ*RRSEPCN 233
QGMGY+QPQ + N
Sbjct: 135 NQGMGYMQPQYHNGDVSN 152
>ref|XP_006655386.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Oryza
brachyantha]
Length = 187
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK YLQKYREMEGDSK++AK GD S+K+D+ +
Sbjct: 112 GFEDYIEPLKAYLQKYREMEGDSKLTAKAGDGSVKKDV--LGSHGGSSSSAQGMGQQGAY 169
Query: 180 TQGMGYLQPQ*RRSEPCN 233
QGMGY+QPQ + N
Sbjct: 170 NQGMGYMQPQYHNGDVSN 187
>ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y subunit B-like
[Brachypodium distachyon]
Length = 182
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK+++K GD S+K+D T +
Sbjct: 106 GFEDYIEPLKVYLQKYREMEGDSKLTSKSGDGSVKKD-TLGPHTGTSSSSAQGMGQQVAY 164
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 165 NQGMGYMQPQ 174
>ref|XP_006644967.1| PREDICTED: nuclear transcription factor Y subunit B-2-like [Oryza
brachyantha]
Length = 164
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAKGDNSLKQDITXXXXXXXXXXXXXXXXXXXXFT 182
GFE+Y+EPL++YLQKYREMEGDSK+++K D S+K+D +T
Sbjct: 93 GFEEYVEPLRIYLQKYREMEGDSKLTSKADGSVKKD---AIGPQSGASSSSAQGMVGAYT 149
Query: 183 QGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 150 QGMGYMQPQ 158
>gb|AFO85383.1| nuclear factor YB2 [Sorghum bicolor] gi|398559775|gb|AFO85384.1|
nuclear factor YB2 [Sorghum bicolor]
gi|398559777|gb|AFO85385.1| nuclear factor YB2 [Sorghum
bicolor] gi|398559779|gb|AFO85386.1| nuclear factor YB2
[Sorghum bicolor]
Length = 180
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK GD S+K+D +
Sbjct: 105 GFEDYIEPLKVYLQKYREMEGDSKLTAKTGDGSIKKD--ALGHVGGSSSAAQGMGQQGAY 162
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 163 NQGMGYMQPQ 172
>sp|P25209.1|NFYB_MAIZE RecName: Full=Nuclear transcription factor Y subunit B;
Short=NF-YB; AltName: Full=CAAT box DNA-binding protein
subunit B
Length = 179
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK D S+K+D +
Sbjct: 103 GFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKD--ALGHVGASSSAAEGMGQQGAY 160
Query: 180 TQGMGYLQPQ*RRSEPCNI 236
QGMGY+QPQ + N+
Sbjct: 161 NQGMGYMQPQYHNGDISNV 179
>ref|NP_001105435.1| nuclear transcription factor Y subunit B [Zea mays]
gi|22380|emb|CAA42234.1| CAAT-box DNA binding protein
subunit B (NF-YB) [Zea mays]
Length = 178
Score = 68.6 bits (166), Expect = 9e-10
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK D S+K+D +
Sbjct: 103 GFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKD--ALGHVGASSSAAEGMGQQGAY 160
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 161 NQGMGYMQPQ 170
>emb|CBH26150.1| CAAT-box DNA binding protein [Zea mays]
gi|262113636|emb|CBH26151.1| CAAT-box DNA binding
protein [Zea mays]
Length = 178
Score = 68.6 bits (166), Expect = 9e-10
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK D S+K+D +
Sbjct: 103 GFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKD--ALGHVGASSSAAQGMGQQGAY 160
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 161 NQGMGYMQPQ 170
>ref|NP_001106052.1| transcription factor subunit NF-YB2 [Zea mays]
gi|84569897|gb|ABC59232.1| transcription factor subunit
NF-YB2 [Zea mays]
Length = 185
Score = 68.6 bits (166), Expect = 9e-10
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK++AK D S+K+D +
Sbjct: 110 GFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKD--ALGHVGASSSAAQGMGQQGAY 167
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 168 NQGMGYMQPQ 177
>dbj|BAC76331.1| HAP3 [Oryza sativa Japonica Group]
Length = 178
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFE+Y++PLK+YL KYREMEGDSK+S+K GD S+K+D +
Sbjct: 106 GFEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKD---TIGPHSGASSSSAQGMVGAY 162
Query: 180 TQGMGYLQPQ 209
TQGMGY+QPQ
Sbjct: 163 TQGMGYMQPQ 172
>gb|AAQ01152.1| CCAAT-binding protein [Oryza sativa]
Length = 189
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFE+Y++PLK+YL KYREMEGDSK+S+K GD S+K+D +
Sbjct: 92 GFEEYVDPLKIYLHKYREMEGDSKLSSKAGDGSVKKD---TIGPHSGASSSSAQGMVGAY 148
Query: 180 TQGMGYLQPQ 209
TQGMGY+QPQ
Sbjct: 149 TQGMGYMQPQ 158
>ref|XP_004970483.1| PREDICTED: nuclear transcription factor Y subunit B-3-like isoform
X2 [Setaria italica]
Length = 163
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDY++PLK+YLQKYREMEGDSK+S K G+ S+K+D +
Sbjct: 90 GFEDYVDPLKIYLQKYREMEGDSKLSTKAGEGSVKKD--AISPHGGTSSSSNQLVQHGVY 147
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 148 NQGMGYMQPQ 157
>ref|XP_004970482.1| PREDICTED: nuclear transcription factor Y subunit B-3-like isoform
X1 [Setaria italica]
Length = 165
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDY++PLK+YLQKYREMEGDSK+S K G+ S+K+D +
Sbjct: 90 GFEDYVDPLKIYLQKYREMEGDSKLSTKAGEGSVKKD--AISPHGGTSSSSNQLVQHGVY 147
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 148 NQGMGYMQPQ 157
>dbj|BAK07867.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|380750164|gb|AFE55546.1| NF-YB2 [Hordeum vulgare]
Length = 165
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFE+Y++PLK+YLQKYR+MEGDSK+++K GD S+K+DI +
Sbjct: 91 GFEEYVDPLKIYLQKYRDMEGDSKLTSKSGDGSVKKDI-IGAHGGATSSNAQVMVQHGAY 149
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 150 AQGMGYMQPQ 159
>ref|XP_002458721.1| hypothetical protein SORBIDRAFT_03g039000 [Sorghum bicolor]
gi|241930696|gb|EES03841.1| hypothetical protein
SORBIDRAFT_03g039000 [Sorghum bicolor]
Length = 167
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFE+Y+EPLK+YLQKYREMEGDSK+S K G+ S+K+D +
Sbjct: 94 GFEEYVEPLKIYLQKYREMEGDSKLSTKAGEGSIKKD--AISSHGGTSSSSNQLVQHGVY 151
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 152 NQGMGYMQPQ 161
>ref|NP_001141333.1| CAAT box binding protein1 [Zea mays] gi|194704036|gb|ACF86102.1|
unknown [Zea mays]
Length = 180
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFEDYIEPLK+YLQKYREMEGDSK+++K D S+K+D +
Sbjct: 105 GFEDYIEPLKVYLQKYREMEGDSKLTSKSSDGSIKKD--ALGHVGASSSAVQGMGQQGTY 162
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 163 NQGMGYMQPQ 172
>ref|XP_003564550.1| PREDICTED: nuclear transcription factor Y subunit B-2-like
[Brachypodium distachyon]
Length = 168
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 GFEDYIEPLKLYLQKYREMEGDSKVSAK-GDNSLKQDITXXXXXXXXXXXXXXXXXXXXF 179
GFE+Y+EPLK+YL KYR+MEGDSK+++K GD S+K+D T +
Sbjct: 94 GFEEYVEPLKIYLHKYRDMEGDSKLTSKSGDGSVKKD-TIGAHGGASSSNAQAMVQHGAY 152
Query: 180 TQGMGYLQPQ 209
QGMGY+QPQ
Sbjct: 153 PQGMGYMQPQ 162