BLASTX nr result

ID: Zingiber25_contig00002308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00002308
         (885 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833...    86   1e-14
ref|NP_001051573.1| Os03g0799000 [Oryza sativa Japonica Group] g...    83   1e-13
gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group]            83   1e-13
gb|EAY92196.1| hypothetical protein OsI_13914 [Oryza sativa Indi...    83   1e-13
gb|AAD41007.1|AF107024_1 histone H1 WH1B.1 [Triticum aestivum]         82   2e-13
dbj|BAA25204.1| histone H1 [Triticum aestivum]                         82   3e-13
ref|XP_006651910.1| PREDICTED: histone H1-like [Oryza brachyantha]     81   4e-13
ref|XP_004981416.1| PREDICTED: histone H1-like [Setaria italica]       80   8e-13
ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [S...    80   8e-13
tpg|DAA51960.1| TPA: putative histone H1/H5 domain family protei...    80   1e-12
tpg|DAA51959.1| TPA: putative histone H1/H5 domain family protei...    80   1e-12
gb|AFW67339.1| putative histone H1/H5 domain family protein [Zea...    80   1e-12
gb|ACG38727.1| histone H1 [Zea mays]                                   80   1e-12
gb|ACG36211.1| histone H1 [Zea mays]                                   80   1e-12
gb|ACG34728.1| histone H1 [Zea mays]                                   80   1e-12
gb|ACF80086.1| unknown [Zea mays] gi|413932787|gb|AFW67338.1| pu...    80   1e-12
ref|NP_001105430.1| histone H1 [Zea mays] gi|121950|sp|P23444.2|...    80   1e-12
dbj|BAJ90542.1| predicted protein [Hordeum vulgare subsp. vulgar...    80   1e-12
gb|ACG48749.1| histone H1 [Zea mays]                                   80   1e-12
emb|CAA42529.2| histone H1 [Triticum aestivum]                         79   2e-12

>ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833820 [Brachypodium
           distachyon]
          Length = 297

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 41/67 (61%), Positives = 47/67 (70%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEM+ EAI TLKER GSS YAI KF+E+KHKAHLPPNFRK               TK
Sbjct: 60  PPYAEMVSEAISTLKERTGSSQYAIAKFVEEKHKAHLPPNFRKLLLVQLKKLVAAGKLTK 119

Query: 181 IKSSFKI 201
           +KSS+K+
Sbjct: 120 VKSSYKL 126


>ref|NP_001051573.1| Os03g0799000 [Oryza sativa Japonica Group]
           gi|28209501|gb|AAO37519.1| histone-like protein [Oryza
           sativa Japonica Group] gi|108711572|gb|ABF99367.1|
           linker histone H1 and H5 family protein, expressed
           [Oryza sativa Japonica Group]
           gi|113550044|dbj|BAF13487.1| Os03g0799000 [Oryza sativa
           Japonica Group] gi|125588261|gb|EAZ28925.1| hypothetical
           protein OsJ_12968 [Oryza sativa Japonica Group]
           gi|215708730|dbj|BAG93999.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 293

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 41/67 (61%), Positives = 46/67 (68%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EAI TLKER GSS YAIGKF+EDKHK HLP NFRK               TK
Sbjct: 55  PPYAEMISEAIATLKERTGSSQYAIGKFLEDKHKDHLPSNFRKQLLVQIKKLVAAGKLTK 114

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 115 VKNSYKL 121


>gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group]
          Length = 315

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 41/67 (61%), Positives = 46/67 (68%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EAIVTLKER GSS YAIGKF+EDKHK HLP NFRK                K
Sbjct: 74  PPYAEMIMEAIVTLKERTGSSQYAIGKFLEDKHKNHLPGNFRKILLGQLKRLTAAGKLKK 133

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 134 VKNSYKV 140


>gb|EAY92196.1| hypothetical protein OsI_13914 [Oryza sativa Indica Group]
          Length = 293

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 41/67 (61%), Positives = 46/67 (68%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EAI TLKER GSS YAIGKF+EDKHK HLP NFRK               TK
Sbjct: 55  PPYAEMISEAIATLKERTGSSQYAIGKFLEDKHKDHLPSNFRKQLLVQIKKLVAAGKLTK 114

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 115 VKNSYKL 121


>gb|AAD41007.1|AF107024_1 histone H1 WH1B.1 [Triticum aestivum]
          Length = 275

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 39/67 (58%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           P YAEM+ EAI  LKER GSSPYAI KF+EDKHKAHLP NFRK               TK
Sbjct: 62  PTYAEMVSEAITALKERTGSSPYAIAKFVEDKHKAHLPANFRKILSVQLKKLVASGKLTK 121

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 122 VKASYKL 128


>dbj|BAA25204.1| histone H1 [Triticum aestivum]
          Length = 288

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 40/67 (59%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           P YAEM+ EAI  LKERGGSS  AIGKFIEDKHKAHLP NFRK               TK
Sbjct: 68  PTYAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 127

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 128 VKASYKL 134


>ref|XP_006651910.1| PREDICTED: histone H1-like [Oryza brachyantha]
          Length = 295

 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 40/67 (59%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EAI TLKER GSS YAI KF+EDKHK HLP NFRK               TK
Sbjct: 58  PPYAEMISEAITTLKERTGSSQYAIAKFLEDKHKDHLPSNFRKQLLVQIKKLVAGGKLTK 117

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 118 VKNSYKV 124


>ref|XP_004981416.1| PREDICTED: histone H1-like [Setaria italica]
          Length = 295

 Score = 80.5 bits (197), Expect = 8e-13
 Identities = 39/67 (58%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EAI +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMISEAITSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLVQLKKLVAGGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [Sorghum bicolor]
           gi|241920138|gb|EER93282.1| hypothetical protein
           SORBIDRAFT_01g005010 [Sorghum bicolor]
          Length = 281

 Score = 80.5 bits (197), Expect = 8e-13
 Identities = 39/67 (58%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EAI +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMISEAITSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLVQLKKLVAAGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>tpg|DAA51960.1| TPA: putative histone H1/H5 domain family protein [Zea mays]
          Length = 355

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EA+ +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 133 PPYAEMISEAVTSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLGQLKKLVAGGKLTK 192

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 193 VKNSYKL 199


>tpg|DAA51959.1| TPA: putative histone H1/H5 domain family protein [Zea mays]
          Length = 368

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EA+ +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 133 PPYAEMISEAVTSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLGQLKKLVAGGKLTK 192

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 193 VKNSYKL 199


>gb|AFW67339.1| putative histone H1/H5 domain family protein [Zea mays]
          Length = 248

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEM+ EAI +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKDKLPPNFRKLLNVQLKKLVAGGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>gb|ACG38727.1| histone H1 [Zea mays]
          Length = 273

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EA+ +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMISEAVTSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLGQLKKLVAGGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>gb|ACG36211.1| histone H1 [Zea mays]
          Length = 273

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EA+ +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMISEAVTSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLGQLKKLVAGGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>gb|ACG34728.1| histone H1 [Zea mays]
          Length = 269

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEMI EA+ +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMISEAVTSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLGQLKKLVAAGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>gb|ACF80086.1| unknown [Zea mays] gi|413932787|gb|AFW67338.1| putative histone
           H1/H5 domain family protein [Zea mays]
          Length = 261

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEM+ EAI +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKDKLPPNFRKLLNVQLKKLVAGGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>ref|NP_001105430.1| histone H1 [Zea mays] gi|121950|sp|P23444.2|H1_MAIZE RecName:
           Full=Histone H1 gi|22321|emb|CAA40362.1| H1 histone [Zea
           mays]
          Length = 246

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +1

Query: 4   PYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTKI 183
           PYAEM+ EAI +LKER GSS YAI KF+EDKHKA LPPNFRK               TK+
Sbjct: 52  PYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKV 111

Query: 184 KSSFKI 201
           K+S+K+
Sbjct: 112 KNSYKL 117


>dbj|BAJ90542.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326520894|dbj|BAJ92810.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 230

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 44/67 (65%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           P YAEM+ EAI  LKERGGSS  AIGKF+E+KHKAHLP NFRK               TK
Sbjct: 49  PSYAEMVSEAIAALKERGGSSTVAIGKFVEEKHKAHLPANFRKMLLTQIKKLVAAGKLTK 108

Query: 181 IKSSFKI 201
           +K S+K+
Sbjct: 109 VKGSYKL 115


>gb|ACG48749.1| histone H1 [Zea mays]
          Length = 260

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           PPYAEM+ EA+ +LKER GSS YAI KF+EDKHK  LPPNFRK               TK
Sbjct: 51  PPYAEMVSEAVTSLKERTGSSSYAIAKFVEDKHKDKLPPNFRKLLNVQLKKLVAGGKLTK 110

Query: 181 IKSSFKI 201
           +K+S+K+
Sbjct: 111 VKNSYKL 117


>emb|CAA42529.2| histone H1 [Triticum aestivum]
          Length = 237

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 39/67 (58%), Positives = 43/67 (64%)
 Frame = +1

Query: 1   PPYAEMIKEAIVTLKERGGSSPYAIGKFIEDKHKAHLPPNFRKFXXXXXXXXXXXXXXTK 180
           P YAEM+ EAI  LKER GSS  AIGKFIEDKHKAHLP NFRK               TK
Sbjct: 55  PSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTK 114

Query: 181 IKSSFKI 201
           +K S+K+
Sbjct: 115 VKGSYKL 121


Top