BLASTX nr result
ID: Zingiber25_contig00002267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00002267
(3879 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group] g... 1730 0.0
emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group] 1730 0.0
gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami... 1729 0.0
ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [S... 1727 0.0
ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV a... 1723 0.0
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ... 1723 0.0
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p... 1720 0.0
ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S... 1718 0.0
emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group] 1717 0.0
emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group] 1716 0.0
gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays] 1712 0.0
ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D sub... 1704 0.0
ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerase D sub... 1702 0.0
gb|EMS61833.1| DNA-directed RNA polymerase D subunit 2a [Triticu... 1693 0.0
ref|XP_003580654.1| PREDICTED: DNA-directed RNA polymerase D sub... 1678 0.0
gb|EMT10124.1| DNA-directed RNA polymerase II subunit RPB2 [Aegi... 1640 0.0
gb|EMS59628.1| DNA-directed RNA polymerase D subunit 2a [Triticu... 1548 0.0
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 1543 0.0
gb|AFW57180.1| putative DNA-directed RNA polymerase subunit fami... 1541 0.0
ref|XP_002445131.1| hypothetical protein SORBIDRAFT_07g004600 [S... 1541 0.0
>ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group]
gi|113565612|dbj|BAF15955.1| Os04g0641000, partial [Oryza
sativa Japonica Group]
Length = 1270
Score = 1730 bits (4481), Expect = 0.0
Identities = 838/1170 (71%), Positives = 973/1170 (83%), Gaps = 24/1170 (2%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V VEP YDPS +G GW
Sbjct: 101 LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGW 160
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA I FG V+LE+P FW D+ + SLKL P+HARLQNMTYSS++KVEV Q Y EK
Sbjct: 161 RHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEK 220
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+GND + KR + + I IGRLPVMV SNLCWL L +SDC FDSGGYFLIKG
Sbjct: 221 SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKG 280
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQ+CLTR+WV D+P VS+LS ++++RIY+KL+++ E +GG++IS F
Sbjct: 281 MEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGKIISISF 340
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+A MPIW+MFFALG SDKD+F++I++E C+A + + I ATIK+++E EGFR DKA
Sbjct: 341 LYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKAR 400
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D L+KN+KFPP E FD Y++KYLFP+I+G+R+KALFLGYMVKCLL++ GKRKCDNK
Sbjct: 401 QYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNK 460
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL LAGELL RELR H+RHAER MVK +QRDLN + LQ + Y DASIITNGL
Sbjct: 461 DDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGL 520
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYK+ ER +GIVATLRRTNPLQMISD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 521 NRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPS 580
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCF+STPDGENCGLVKNLAVTA VSS+V P +D + CGM KL E+ E + M
Sbjct: 581 YWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMD 640
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNGDWVG CSD +S RLRCMRR IDPQVEIK DKHQ+EVR+F+DAGRILRPLL
Sbjct: 641 KIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGRILRPLL 700
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANE-------- 1638
+V+NL KIR KG + SF +LM ED ++AWGI++ F + E
Sbjct: 701 VVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMN 760
Query: 1637 -------------GSSLKYSHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAI 1497
G Y+HCELD SFLLGLSC I PFANHNFARRVLYQ+EKHS QAI
Sbjct: 761 KAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAI 820
Query: 1496 GFSTVNPSIRVDTLSHQLYYPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIV 1317
G+ST NP IRVDTLSHQLYYPQ+PLF+TV+++C+ + + GRKD ARPEY+NGQNAIV
Sbjct: 821 GYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIV 880
Query: 1316 AVNVHQGFNQEDSLVMNKSSLDRGMFRTEHFRSYKAEVENK---VLSKRLKLKEKVDFGK 1146
AVNVHQGFNQEDS+VMN++SL+RGMFRTEHFR+YKAEVENK +KRLK+K+K+DFGK
Sbjct: 881 AVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGK 940
Query: 1145 IDSKKGRVDSLDDDGFPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAAN 966
+ SK+GRVD+LDDDG PYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ+V+L+AN
Sbjct: 941 MQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSAN 1000
Query: 965 DEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAF 786
DEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLE+QENFPFT +GIVPDIVINPHAF
Sbjct: 1001 DEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIVINPHAF 1060
Query: 785 PTRQTPGQLLEAALGKGIACRDSTRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRT 606
PTRQTPGQLLEAALGKGIA + RYATPF+TAS D I DQLH++GFSRWG+E VLNGRT
Sbjct: 1061 PTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNGRT 1120
Query: 605 GEMMSSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC 426
GE M S+IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC
Sbjct: 1121 GERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC 1180
Query: 425 LLAHGAAANLHERLFMLSDFSQMHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENI 246
LLAHGAAANLHERLFMLSDFSQMH+CQ C R ANVI+RPVPGGKKIRGPYC FC+S ENI
Sbjct: 1181 LLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRSSENI 1240
Query: 245 VRINVPYGAKLLYMELFSMGICLKFETELC 156
VRINVPYGAKLLY ELFSMGICL+FETE+C
Sbjct: 1241 VRINVPYGAKLLYQELFSMGICLRFETEVC 1270
>emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]
Length = 1316
Score = 1730 bits (4481), Expect = 0.0
Identities = 838/1170 (71%), Positives = 973/1170 (83%), Gaps = 24/1170 (2%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V VEP YDPS +G GW
Sbjct: 147 LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGW 206
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA I FG V+LE+P FW D+ + SLKL P+HARLQNMTYSS++KVEV Q Y EK
Sbjct: 207 RHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEK 266
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+GND + KR + + I IGRLPVMV SNLCWL L +SDC FDSGGYFLIKG
Sbjct: 267 SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKG 326
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQ+CLTR+WV D+P VS+LS ++++RIY+KL+++ E +GG++IS F
Sbjct: 327 MEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGKIISISF 386
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+A MPIW+MFFALG SDKD+F++I++E C+A + + I ATIK+++E EGFR DKA
Sbjct: 387 LYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKAR 446
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D L+KN+KFPP E FD Y++KYLFP+I+G+R+KALFLGYMVKCLL++ GKRKCDNK
Sbjct: 447 QYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNK 506
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL LAGELL RELR H+RHAER MVK +QRDLN + LQ + Y DASIITNGL
Sbjct: 507 DDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGL 566
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYK+ ER +GIVATLRRTNPLQMISD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 567 NRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPS 626
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCF+STPDGENCGLVKNLAVTA VSS+V P +D + CGM KL E+ E + M
Sbjct: 627 YWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMD 686
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNGDWVG CSD +S RLRCMRR IDPQVEIK DKHQ+EVR+F+DAGRILRPLL
Sbjct: 687 KIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGRILRPLL 746
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANE-------- 1638
+V+NL KIR KG + SF +LM ED ++AWGI++ F + E
Sbjct: 747 VVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMN 806
Query: 1637 -------------GSSLKYSHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAI 1497
G Y+HCELD SFLLGLSC I PFANHNFARRVLYQ+EKHS QAI
Sbjct: 807 KAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAI 866
Query: 1496 GFSTVNPSIRVDTLSHQLYYPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIV 1317
G+ST NP IRVDTLSHQLYYPQ+PLF+TV+++C+ + + GRKD ARPEY+NGQNAIV
Sbjct: 867 GYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIV 926
Query: 1316 AVNVHQGFNQEDSLVMNKSSLDRGMFRTEHFRSYKAEVENK---VLSKRLKLKEKVDFGK 1146
AVNVHQGFNQEDS+VMN++SL+RGMFRTEHFR+YKAEVENK +KRLK+K+K+DFGK
Sbjct: 927 AVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGK 986
Query: 1145 IDSKKGRVDSLDDDGFPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAAN 966
+ SK+GRVD+LDDDG PYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ+V+L+AN
Sbjct: 987 MQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSAN 1046
Query: 965 DEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAF 786
DEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLE+QENFPFT +GIVPDIVINPHAF
Sbjct: 1047 DEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIVINPHAF 1106
Query: 785 PTRQTPGQLLEAALGKGIACRDSTRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRT 606
PTRQTPGQLLEAALGKGIA + RYATPF+TAS D I DQLH++GFSRWG+E VLNGRT
Sbjct: 1107 PTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNGRT 1166
Query: 605 GEMMSSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC 426
GE M S+IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC
Sbjct: 1167 GERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC 1226
Query: 425 LLAHGAAANLHERLFMLSDFSQMHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENI 246
LLAHGAAANLHERLFMLSDFSQMH+CQ C R ANVI+RPVPGGKKIRGPYC FC+S ENI
Sbjct: 1227 LLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRSSENI 1286
Query: 245 VRINVPYGAKLLYMELFSMGICLKFETELC 156
VRINVPYGAKLLY ELFSMGICL+FETE+C
Sbjct: 1287 VRINVPYGAKLLYQELFSMGICLRFETEVC 1316
>gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea
mays]
Length = 2163
Score = 1729 bits (4479), Expect = 0.0
Identities = 828/1147 (72%), Positives = 983/1147 (85%), Gaps = 1/1147 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V+VEPGYDPSKKGS W
Sbjct: 1021 LEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGSW 1080
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA I FG V+LEKP FW ++V S+ P HARLQNMTY+S+L+VEV +Q Y EK
Sbjct: 1081 KHAIIKFGRVKLEKPVFWTGKDEV---SVDFKPWHARLQNMTYASRLRVEVTIQVYSLEK 1137
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DK+K+GND ++QKR + I IG LPVMV SNLC L +L +S+C+FD+GGYFL+KG
Sbjct: 1138 SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECLFDAGGYFLVKG 1197
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQE RCL RLW+ D+P T+S++SE+K++RIY+KLVE+ + E F+G ++IS F
Sbjct: 1198 MEKVFIAQELRCLRRLWISDRPCWTISFMSEMKRRRIYIKLVESTRSEDFSGSKIISISF 1257
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+ATMP+W++FFALG SDK+ F++ID++ C+A + + I ATIK+++E GFR DKA
Sbjct: 1258 LYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDELCGGFRKSDKAR 1317
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D LVK++KFPP ESFD Y++K+LFP I+G+R+KALFLGYMVKCLL++ GKRKCDNK
Sbjct: 1318 QYVDELVKSSKFPPVESFDDYIAKFLFPGISGNRNKALFLGYMVKCLLMAFTGKRKCDNK 1377
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L GELL RELR H+R AERRMVK +QRDLN D LQ +ERY DASI+TNGL
Sbjct: 1378 DDFRNKRLDLPGELLGRELRAHLRQAERRMVKAIQRDLNSDRELQDLERYIDASIVTNGL 1437
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYK+AER SGIVATLRRTNPLQM+SD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 1438 NRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPS 1497
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCF+STPDGENCGLVKNLAVT++VSSKV+QP +++ + CGM KL+++ E ++ M
Sbjct: 1498 YWGKLCFMSTPDGENCGLVKNLAVTSIVSSKVVQPLIESFISCGMNKLNDIPTEHIQRMD 1557
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNG+W+G CSD +S RLRCMRR IDPQVEIK DKH KEVR+F+DAGRILRPLL
Sbjct: 1558 KIFLNGNWLGSCSDSASFVFRLRCMRRSSLIDPQVEIKRDKHYKEVRLFSDAGRILRPLL 1617
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKYSH 1614
+V+NL KIR+ KG + SF LM ED Q AWGI+ F +EG+ Y+H
Sbjct: 1618 VVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLF-ESEGAISSYTH 1676
Query: 1613 CELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYP 1434
CELDPSF+LGLSC I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYP
Sbjct: 1677 CELDPSFILGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTSNPRIRVDTLSHQLYYP 1736
Query: 1433 QKPLFRTVVSECL-FSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSS 1257
Q+PLF+TV+++CL S ++ GRKD RPEY+NGQNAIVAVNVHQGFNQEDSLVMN++S
Sbjct: 1737 QRPLFKTVIADCLGRSDCTTFGRKDDFTRPEYFNGQNAIVAVNVHQGFNQEDSLVMNRAS 1796
Query: 1256 LDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASL 1077
L+RGMFRTEH RSYKA+VENK +KRLKLKEK+DFGK +SK+GRVD+LDDDG PY+GASL
Sbjct: 1797 LERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYIGASL 1856
Query: 1076 QSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKF 897
Q+ DIVIGKVSESGEDHSIKLKHTEKGMVQKV+L+ANDEGKNFAVVTLRQVR+PCLGDKF
Sbjct: 1857 QTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKF 1916
Query: 896 SSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDS 717
SSMHGQKGVVGFLE+QENFPFT +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC+ +
Sbjct: 1917 SSMHGQKGVVGFLESQENFPFTHDGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGT 1976
Query: 716 TRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAE 537
RYATPF+TASVD IA+QLH++G+SRWG+E VLNGRTGE M S++FMGPTFYQRLIHM+E
Sbjct: 1977 MRYATPFTTASVDVIAEQLHKAGYSRWGAENVLNGRTGERMKSLVFMGPTFYQRLIHMSE 2036
Query: 536 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQM 357
DKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHERLFMLSDFSQM
Sbjct: 2037 DKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQM 2096
Query: 356 HICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICL 177
HICQ C R ANV++R VPGGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICL
Sbjct: 2097 HICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICL 2156
Query: 176 KFETELC 156
KFETE+C
Sbjct: 2157 KFETEVC 2163
>ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [Sorghum bicolor]
gi|241922081|gb|EER95225.1| hypothetical protein
SORBIDRAFT_01g042100 [Sorghum bicolor]
Length = 1228
Score = 1727 bits (4472), Expect = 0.0
Identities = 828/1147 (72%), Positives = 983/1147 (85%), Gaps = 1/1147 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY+DF+ HGLQ+LFD+LG+V+VEPGYDPSKKGS GW
Sbjct: 86 LEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGW 145
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA I FG V+LEKP FW ++ S+ P HARLQNMTY+S+L VEV +Q Y EK
Sbjct: 146 KHAIIKFGRVKLEKPVFWTGKDE---GSVDFKPWHARLQNMTYASRLIVEVNIQVYSLEK 202
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DK+K+GND ++QKR + I IG LPVMV SNLC L +L +S+C+FD+GGYFL+KG
Sbjct: 203 SDKSKTGNDGFVQKRDFMNETHWIFIGLLPVMVKSNLCLLHSLKESECLFDAGGYFLVKG 262
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQE RCL RLW++D+P +S++SE+K++RIY+KLVE+ + E F+G ++IS F
Sbjct: 263 MEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRRRIYIKLVESTRSEDFSGSKIISISF 322
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+ATMP+W++FFALG SDK+ F++ID++ C+A + + I ATIK+++E EGFR DKA
Sbjct: 323 LYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDELCEGFRKSDKAR 382
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D LVK+++FPP ESFD Y++++LFP+I+G+R+KALFLGYMVKCLL++ GKRKCDNK
Sbjct: 383 QYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNK 442
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L GELL RELR H+R AE+RMVK +QRDLN D LQ +ERY DASI+TNGL
Sbjct: 443 DDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGL 502
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
+RAF+TG+W HPYK+AER SGIVATLRRTNPLQM+SD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 503 SRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPS 562
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCF+STPDGENCGLVKNLAVTA+VSS+V+QP +++ + CGM KL+++ E ++ M
Sbjct: 563 YWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIESFISCGMSKLNDIPTEHIQRMD 622
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNG+WVG C D +S RLRCMRR IDPQVEIK DKH KEVR+F+DAGRILRPLL
Sbjct: 623 KIFLNGNWVGSCKDSASFVFRLRCMRRSSLIDPQVEIKRDKHHKEVRVFSDAGRILRPLL 682
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKYSH 1614
+V+NLKKIR+ KG + SF LM ED Q AWGI+ F +EG+ Y+H
Sbjct: 683 VVENLKKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLF-ESEGAISSYTH 741
Query: 1613 CELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYP 1434
CELDPSFLLGLSC I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYP
Sbjct: 742 CELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYP 801
Query: 1433 QKPLFRTVVSECL-FSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSS 1257
Q+PLF+TV+++CL S ++ GRKD RPEY+NGQNAIVAVNVHQGFNQEDSLVMN++S
Sbjct: 802 QRPLFKTVIADCLGRSDYTTFGRKDDFMRPEYFNGQNAIVAVNVHQGFNQEDSLVMNRAS 861
Query: 1256 LDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASL 1077
L+RGMFRTEH RSYKA+VENK +KRLKLKEK+DFGK +SK+GRVD+LDDDG PY+GASL
Sbjct: 862 LERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYIGASL 921
Query: 1076 QSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKF 897
Q+ DIVIGKVSESGEDHSIKLKHTEKGMVQKV+L+ANDEGKNFAVVTLRQVR+PCLGDKF
Sbjct: 922 QTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKF 981
Query: 896 SSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDS 717
SSMHGQKGVVGFLE+QENFPFT +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC+ +
Sbjct: 982 SSMHGQKGVVGFLESQENFPFTHKGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGT 1041
Query: 716 TRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAE 537
RYATPF+TASVD IA+QLHR+G+SRWG+E VLNGRTGE M S+IFMGPTFYQRLIHM+E
Sbjct: 1042 MRYATPFTTASVDVIAEQLHRAGYSRWGTENVLNGRTGERMQSLIFMGPTFYQRLIHMSE 1101
Query: 536 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQM 357
DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHERLFMLSDFSQM
Sbjct: 1102 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQM 1161
Query: 356 HICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICL 177
HICQ C R ANV++R V GGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICL
Sbjct: 1162 HICQTCERVANVVMRSVSGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICL 1221
Query: 176 KFETELC 156
KF+TE+C
Sbjct: 1222 KFDTEVC 1228
>ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Oryza brachyantha]
Length = 1250
Score = 1723 bits (4463), Expect = 0.0
Identities = 839/1172 (71%), Positives = 973/1172 (83%), Gaps = 26/1172 (2%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY+DF+ +GLQ+LFD+LG+V VEP YDPS +G GW
Sbjct: 83 LEKFCKEASRSFFDEIGLISHQINSYNDFVAYGLQELFDSLGEVTVEPSYDPSNRGPGGW 142
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA I FG V+LE+P FW D+ + SLKL P+HARLQNMTYSS++KVEV +Q Y EK
Sbjct: 143 RHAIIKFGRVKLEEPVFWAHGYDIDEESLKLKPRHARLQNMTYSSKMKVEVHIQVYSMEK 202
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+GND + K+ + + I GRLPVMV SNLCWL L +SDC FDSGGYFLIKG
Sbjct: 203 SDKAKTGNDKFSYKKDIINETHYINFGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKG 262
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQ+CLTR+WV ++P TVS+LS ++++RIY+KL+++ K E ++IS F
Sbjct: 263 MEKVFIAQEQKCLTRIWVEERPCWTVSFLSAIRRRRIYIKLIDSTKNED---RKIISISF 319
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+A MPIW+MFFALG SDKDVF++ID++ C+A + + I ATIK+++E EGFR D+A
Sbjct: 320 LYANMPIWLMFFALGITSDKDVFDVIDMQDCDACVINTISATIKESDELCEGFRKSDRAR 379
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D L+K++KFPP E FD YV++YLFP I+G+R+KALFLGYMVKCLL++ GKRKCDNK
Sbjct: 380 QYVDELIKDSKFPPGEPFDDYVARYLFPGISGNRNKALFLGYMVKCLLMAFTGKRKCDNK 439
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL LAGELL RELR H+RHAER MVK +QRDLN D LQ ++RY DASIITNGL
Sbjct: 440 DDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSDRELQELDRYLDASIITNGL 499
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYKK ER +GIVATLRRTNPLQMISD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 500 NRAFSTGSWCHPYKKNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPS 559
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCF+STPDGENCGLVKNLAVTAVVSS+V QP ++ + CGM KL E+ E + M
Sbjct: 560 YWGKLCFMSTPDGENCGLVKNLAVTAVVSSRVAQPVINRFISCGMNKLHEIPTEEVPKMD 619
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNGDWVG C+D +S RLRCMRR I PQVEIK DKHQ+EVR+F+DAGRILRPLL
Sbjct: 620 KIFLNGDWVGSCTDPASFVLRLRCMRRSGLIGPQVEIKWDKHQREVRVFSDAGRILRPLL 679
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAAN--------- 1641
+V+NL KIR KGG+ SF LM ED ++AWGI+ F +
Sbjct: 680 VVENLNKIRRPKGGSYSFQSLMQQEIIEFIGVEEEEDTKSAWGIRHLFGSEGEKAALVKT 739
Query: 1640 --------------EGSSLKYSHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQ 1503
EG S Y+HCELD SFLLGLSC I PFANHNFARRVLYQ+EKHS Q
Sbjct: 740 NRTEDAFTIRRDIEEGVS-GYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQ 798
Query: 1502 AIGFSTVNPSIRVDTLSHQLYYPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNA 1323
AIG+ST NP IRVDTLSHQLYYPQ+PLF+TVV++C+ + + GRKD ARPEY+NGQNA
Sbjct: 799 AIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVVADCIGRSEYTFGRKDDFARPEYFNGQNA 858
Query: 1322 IVAVNVHQGFNQEDSLVMNKSSLDRGMFRTEHFRSYKAEVENKVL---SKRLKLKEKVDF 1152
IVAVNVHQGFNQEDSLVMN++SL+RGMFRTEHFR+YKAEVENK +KRLK+K+K+DF
Sbjct: 859 IVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKSAPGGNKRLKMKDKIDF 918
Query: 1151 GKIDSKKGRVDSLDDDGFPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLA 972
GK+ SK+GRVD+LDDDG PYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ+V+L+
Sbjct: 919 GKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLS 978
Query: 971 ANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPH 792
ANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGV+GFLE+QENFPFTC+GIVPDIVINPH
Sbjct: 979 ANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVIGFLESQENFPFTCQGIVPDIVINPH 1038
Query: 791 AFPTRQTPGQLLEAALGKGIACRDSTRYATPFSTASVDDIADQLHRSGFSRWGSERVLNG 612
AFPTRQTPGQLLEAALGKGIA + RYATPF+TAS D I DQLH++GFSRWG+E VLNG
Sbjct: 1039 AFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNG 1098
Query: 611 RTGEMMSSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMER 432
RTGE M S+IFMGP FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMER
Sbjct: 1099 RTGERMHSLIFMGPNFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMER 1158
Query: 431 DCLLAHGAAANLHERLFMLSDFSQMHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGE 252
DCLLAHGAAANLHERLFMLSDFSQMHICQ C R ANVI+RPVPGGKKIRGPYC FC+S E
Sbjct: 1159 DCLLAHGAAANLHERLFMLSDFSQMHICQTCERVANVIMRPVPGGKKIRGPYCGFCRSSE 1218
Query: 251 NIVRINVPYGAKLLYMELFSMGICLKFETELC 156
NI RINVPYGAKLLY ELFSMGICL+FETE+C
Sbjct: 1219 NIARINVPYGAKLLYQELFSMGICLRFETEVC 1250
>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
gi|283443696|gb|ADB19857.1| required to maintain
repression 7/RNA polymerase D second largest subunit [Zea
mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
RNA polymerase subunit family protein [Zea mays]
Length = 1229
Score = 1723 bits (4462), Expect = 0.0
Identities = 827/1147 (72%), Positives = 983/1147 (85%), Gaps = 1/1147 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V+VEPGYDPSKKGS GW
Sbjct: 87 LEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGW 146
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA I FG V+LEKP FW ++ S+ P HARLQNMTY+S+L VEV +Q Y EK
Sbjct: 147 KHAIIKFGRVKLEKPVFWTGKDE---GSVDFKPWHARLQNMTYASRLIVEVTIQVYSLEK 203
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DK+K+GND ++QKR + I IG LPVMV SNLC L +L++S+C+FD+GGYFL+KG
Sbjct: 204 SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKG 263
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQRCL RLW+ D+P T+S++SE+K++RIY+KLVE+ + E F+ ++I+ F
Sbjct: 264 MEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVESTRSEDFSESKIITISF 323
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+ATMP+W++FFALG SDK+VF+MID++ C+A + + I ATIK++++ E FR DKA
Sbjct: 324 LYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIKESDKLCEDFRKSDKAR 383
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D LVK+++FPP ESFD Y++++LFP+I+G+R+KALFLGYMVKCLL++ GKRKCDNK
Sbjct: 384 QYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNK 443
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L GELL RELR +R AE+RMVK +QRDLN D LQ +ERY DASI+TNGL
Sbjct: 444 DDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGL 503
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYK+AER SGIVATLRRTNPLQM+SD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 504 NRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPS 563
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCF+STPDGENCGLVKNLAVTA+VSS+V+QP +++ + CGM KL+++ E ++ M
Sbjct: 564 YWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCGMSKLNDIPTEHIQRMD 623
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNG+WVG C + +S RLRCMRR IDPQVEIK DKH EVR+FTDAGRILRPLL
Sbjct: 624 KIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVFTDAGRILRPLL 683
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKYSH 1614
+V+NL KIR+ KG + SF LM ED Q AWGI+ F +EG+ Y+H
Sbjct: 684 VVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEEEDIQCAWGIRHLF-ESEGAISSYTH 742
Query: 1613 CELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYP 1434
CELDPSFLLGLSC I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYP
Sbjct: 743 CELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYP 802
Query: 1433 QKPLFRTVVSECL-FSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSS 1257
Q+PLF+TV+++CL S +S GRK+ ARPEY+NGQNAIVAVNVHQGFNQEDSLVMN++S
Sbjct: 803 QRPLFKTVIADCLGRSDYASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRAS 862
Query: 1256 LDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASL 1077
L+RGMFRTEH RSYKA+VENK +KRLKLKEK+DFGK +SK+GRVD+LDDDG PYVGASL
Sbjct: 863 LERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYVGASL 922
Query: 1076 QSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKF 897
Q+ DIVIGKVSESGEDHSIKLKHTEKGMVQKV+L+ANDEGKNFAVVTLRQVR+PCLGDKF
Sbjct: 923 QTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKF 982
Query: 896 SSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDS 717
SSMHGQKGVVGFLE+QENFPFT EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC+ +
Sbjct: 983 SSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGT 1042
Query: 716 TRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAE 537
RYATPF+TASVD IA+QLHR+G+SRWGSE VLNGRTGE + S++FMGPTFYQRLIHM+E
Sbjct: 1043 MRYATPFTTASVDVIAEQLHRAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSE 1102
Query: 536 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQM 357
DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHERLF+LSDFSQM
Sbjct: 1103 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQM 1162
Query: 356 HICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICL 177
HICQ C R ANV++R VPGGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICL
Sbjct: 1163 HICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICL 1222
Query: 176 KFETELC 156
KFET++C
Sbjct: 1223 KFETQVC 1229
>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
largest subunit 2-2 [Zea mays]
Length = 1229
Score = 1720 bits (4454), Expect = 0.0
Identities = 826/1147 (72%), Positives = 982/1147 (85%), Gaps = 1/1147 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V+VEPGYDPSKKGS GW
Sbjct: 87 LEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGW 146
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA I FG V+LEKP FW ++ S+ P HARLQNMTY+S+L VEV +Q Y EK
Sbjct: 147 KHAIIKFGRVKLEKPVFWTGKDE---GSVDFKPWHARLQNMTYASRLIVEVTIQVYSLEK 203
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DK+K+GND ++QKR + I IG LPVMV SNLC L +L++S+C+FD+GGYFL+KG
Sbjct: 204 SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKG 263
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQRCL RLW+ D+P T+S++SE+K++RIY+KLVE+ + E F+ ++I+ F
Sbjct: 264 MEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVESTRSEDFSESKIITISF 323
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+ATMP+W++FFALG SDK+VF+MID++ C+A + + I ATIK++++ E FR DKA
Sbjct: 324 LYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIKESDKLCEDFRKSDKAR 383
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D LVK+++FPP ESFD Y++++LFP+I+G+R+KALFLGYMVKCLL++ GKRKCDNK
Sbjct: 384 QYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNK 443
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L GELL RELR +R AE+RMVK +QRDLN D LQ +ERY DASI+TNGL
Sbjct: 444 DDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGL 503
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYK+AER SGIVATLRRTNPLQM+SD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 504 NRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPS 563
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YW KLCF+STPDGENCGLVKNLAVTA+VSS+V+QP +++ + CGM KL+++ E ++ M
Sbjct: 564 YWEKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCGMSKLNDIPTEHIQRMD 623
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNG+WVG C + +S RLRCMRR IDPQVEIK DKH EVR+FTDAGRILRPLL
Sbjct: 624 KIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVFTDAGRILRPLL 683
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKYSH 1614
+V+NL KIR+ KG + SF LM ED Q AWGI+ F +EG+ Y+H
Sbjct: 684 VVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEEEDIQCAWGIRHLF-ESEGAISSYTH 742
Query: 1613 CELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYP 1434
CELDPSFLLGLSC I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYP
Sbjct: 743 CELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYP 802
Query: 1433 QKPLFRTVVSECL-FSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSS 1257
Q+PLF+TV+++CL S +S GRK+ ARPEY+NGQNAIVAVNVHQGFNQEDSLVMN++S
Sbjct: 803 QRPLFKTVIADCLGRSDYASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRAS 862
Query: 1256 LDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASL 1077
L+RGMFRTEH RSYKA+VENK +KRLKLKEK+DFGK +SK+GRVD+LDDDG PYVGASL
Sbjct: 863 LERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYVGASL 922
Query: 1076 QSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKF 897
Q+ DIVIGKVSESGEDHSIKLKHTEKGMVQKV+L+ANDEGKNFAVVTLRQVR+PCLGDKF
Sbjct: 923 QTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKF 982
Query: 896 SSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDS 717
SSMHGQKGVVGFLE+QENFPFT EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC+ +
Sbjct: 983 SSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGT 1042
Query: 716 TRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAE 537
RYATPF+TASVD IA+QLHR+G+SRWGSE VLNGRTGE + S++FMGPTFYQRLIHM+E
Sbjct: 1043 MRYATPFTTASVDVIAEQLHRAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSE 1102
Query: 536 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQM 357
DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHERLF+LSDFSQM
Sbjct: 1103 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQM 1162
Query: 356 HICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICL 177
HICQ C R ANV++R VPGGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICL
Sbjct: 1163 HICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICL 1222
Query: 176 KFETELC 156
KFET++C
Sbjct: 1223 KFETQVC 1229
>ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
gi|241938382|gb|EES11527.1| hypothetical protein
SORBIDRAFT_06g030300 [Sorghum bicolor]
Length = 1239
Score = 1718 bits (4450), Expect = 0.0
Identities = 825/1147 (71%), Positives = 977/1147 (85%), Gaps = 1/1147 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V+VEPGYDPSKKGS GW
Sbjct: 97 LEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGW 156
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA I FG V+LEKP FW ++ S+ P HARLQNMTY+S+LKVEV +Q Y EK
Sbjct: 157 KHAIIKFGRVKLEKPVFWTGKDE---GSVDFKPWHARLQNMTYASRLKVEVTIQVYSLEK 213
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DK+K+GN+ ++QKR + I IG LPVMV SNLC L +L +S+C+FD+GGYFL+KG
Sbjct: 214 SDKSKTGNEGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECLFDAGGYFLVKG 273
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQRCL RLWV D+P +S++ E+K++RIY+KLVE+ + E F+G ++IS F
Sbjct: 274 MEKVFIAQEQRCLKRLWVSDRPFWMISFMHEIKRRRIYIKLVESTRSEDFSGSKVISISF 333
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+ATMP+W++FFALG SDK+ F++ID++ C+A + + I ATIK+++E +GFR DKA
Sbjct: 334 LYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDELCKGFRKSDKAR 393
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D LVK+++FPP ESFD YV+++LFP+I G+R+KA FLGYMVKCLL++ GKRKCDNK
Sbjct: 394 QYVDELVKSSRFPPAESFDDYVARFLFPDINGNRNKAFFLGYMVKCLLMAFTGKRKCDNK 453
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L GELL RELR +R ERRMVK +QRDLN D LQ +ERY DASI+TNGL
Sbjct: 454 DDFRNKRLDLPGELLGRELRAQLRLLERRMVKAIQRDLNNDRELQDLERYIDASIVTNGL 513
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYK+AER SGIVATLRRTNPLQM+SD+RKTRQ+V YAGKAGDARYPNPS
Sbjct: 514 NRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPS 573
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCFLSTPDGENCGLVKNLAVTA+VSS+V QP +++ + CGM KL+++ E ++ M
Sbjct: 574 YWGKLCFLSTPDGENCGLVKNLAVTAIVSSRVGQPLIESFISCGMSKLNDIPTEHIQRMD 633
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
K+FLNG+WVG C D +S RLRCMRR IDPQVEIK DKH KEVR+F+DAGRILRPLL
Sbjct: 634 KIFLNGNWVGSCKDSASFVFRLRCMRRSSMIDPQVEIKRDKHHKEVRVFSDAGRILRPLL 693
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKYSH 1614
+V+NL KIR+ KG + SF LM ED Q AWGI+ F +EG+ Y+H
Sbjct: 694 VVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLF-ESEGAISSYTH 752
Query: 1613 CELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYP 1434
CELDPSFL+GLSC I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYP
Sbjct: 753 CELDPSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYP 812
Query: 1433 QKPLFRTVVSECL-FSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSS 1257
Q+PLF+TV+++CL S ++ GRKD RPEY+NGQNAIVAVNVHQGFNQEDSLVMN++S
Sbjct: 813 QRPLFKTVIADCLGRSDYTAFGRKDDYTRPEYFNGQNAIVAVNVHQGFNQEDSLVMNRAS 872
Query: 1256 LDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASL 1077
L+RGMFRTEH RSYK +VENK +KRLKLKEK+DFGK +SK+GRVD+LDDDG PY+GASL
Sbjct: 873 LERGMFRTEHLRSYKTDVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYIGASL 932
Query: 1076 QSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKF 897
Q+ DIVIGKVSESGEDHSIKLKHTEKGMVQKV+L+ANDEGKNFAVVTLRQVR+PCLGDKF
Sbjct: 933 QTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKF 992
Query: 896 SSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDS 717
SSMHGQKGVVGFLE+QENFPFT EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC+ +
Sbjct: 993 SSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGT 1052
Query: 716 TRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAE 537
RYATPF+TASVD IA+QLH++G+SRWG+E VLNGRTGE M S++FMGPTFYQRLIHM+E
Sbjct: 1053 MRYATPFTTASVDVIAEQLHKAGYSRWGAENVLNGRTGERMQSLVFMGPTFYQRLIHMSE 1112
Query: 536 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQM 357
DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHERLFMLSDFSQM
Sbjct: 1113 DKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQM 1172
Query: 356 HICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICL 177
HICQ C R ANV++R VPGGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICL
Sbjct: 1173 HICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICL 1232
Query: 176 KFETELC 156
KF+TE+C
Sbjct: 1233 KFDTEVC 1239
>emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group]
Length = 1343
Score = 1717 bits (4446), Expect = 0.0
Identities = 839/1197 (70%), Positives = 973/1197 (81%), Gaps = 51/1197 (4%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V VEP YDPS +G GW
Sbjct: 147 LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGW 206
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA I FG V+LE+P FW D+ + SLKL P+HARLQNMTYSS++KVEV Q Y EK
Sbjct: 207 RHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEK 266
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+GND + KR + + I IGRLPVMV SNLCWL L +SDC FDSGGYFLIKG
Sbjct: 267 SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKG 326
Query: 3053 MEK---------------------------TFIAQEQRCLTRLWVVDKPSPTVSYLSEVK 2955
MEK FIAQEQ+CLTR+WV D+P VS+LS ++
Sbjct: 327 MEKDELQGCGGKLYSRNLCLNGKLETPTQKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIR 386
Query: 2954 QKRIYVKLVEAPKVEGFNGGRLISFYFFFATMPIWVMFFALGALSDKDVFEMIDLEGCEA 2775
++RIY+KL+++ E +GG++IS F +A MPIW+MFFALG SDKD+F++I++E C+A
Sbjct: 387 RRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDA 446
Query: 2774 GMTDIILATIKDAEEQFEGFRSIDKACQHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGH 2595
+ + I ATIK+++E EGFR DKA Q++D L+KN+KFPP E FD Y++KYLFP+I+G+
Sbjct: 447 CVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGN 506
Query: 2594 RSKALFLGYMVKCLLLSSVGKRKCDNKDDFRNKRLHLAGELLARELRTHVRHAERRMVKT 2415
R+KALFLGYMVKCLL++ GKRKCDNKDDFRNKRL LAGELL RELR H+RHAER MVK
Sbjct: 507 RNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKA 566
Query: 2414 MQRDLNGDNSLQLIERYWDASIITNGLNRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQ 2235
+QRDLN + LQ + Y DASIITNGLNRAF+TG+W HPYK+ ER +GIVATLRRTNPLQ
Sbjct: 567 LQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQ 626
Query: 2234 MISDMRKTRQQVLYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVL 2055
MISD+RKTRQ+V YAGKAGDARYPNPSYWGKLCF+STPDGENCGLVKNLAVTA VSS+V
Sbjct: 627 MISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVA 686
Query: 2054 QPSVDNLMECGMKKLDEVSLESMRNMGKVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDP 1875
P +D + CGM KL E+ E + M K+FLNGDWVG CSD +S RLRCMRR IDP
Sbjct: 687 PPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDP 746
Query: 1874 QVEIKIDKHQKEVRIFTDAGRILRPLLIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXX 1695
QVEIK DKHQ+EVR+F+DAGRILRPLL+V+NL KIR KG + SF +LM
Sbjct: 747 QVEIKWDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVE 806
Query: 1694 XXEDCQTAWGIKSFFAANE---------------------GSSLKYSHCELDPSFLLGLS 1578
ED ++AWGI++ F + E G Y+HCELD SFLLGLS
Sbjct: 807 EEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLS 866
Query: 1577 CSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYPQKPLFRTVVSEC 1398
C I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYPQ+PLF+TV+++C
Sbjct: 867 CGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADC 926
Query: 1397 LFSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSSLDRGMFRTEHFRS 1218
+ + + GRKD ARPEY+NGQNAIVAVNVHQGFNQEDSLVMN++SL+RGMFRTEHFR+
Sbjct: 927 IGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRN 986
Query: 1217 YKAEVENK---VLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASLQSGDIVIGKV 1047
YKAEVENK +KRLK+K+K+DFGK+ SK+GRVD+LDDDG PYVGASLQSGDIVIGKV
Sbjct: 987 YKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKV 1046
Query: 1046 SESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVV 867
SESGEDHSIKLKHTEKGMVQ+V+L+ANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVV
Sbjct: 1047 SESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVV 1106
Query: 866 GFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDSTRYATPFSTA 687
GFLE+QENFPFT +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA + RYATPF+TA
Sbjct: 1107 GFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTA 1166
Query: 686 SVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAEDKVKFRNTGP 507
S D I DQLH++GFSRWG+E VLNGRTGE M S+IFMGPTFYQRLIHMAEDKVKFRNTGP
Sbjct: 1167 SFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGP 1226
Query: 506 VHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICQKCHRAA 327
VHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMH+CQ C R A
Sbjct: 1227 VHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVA 1286
Query: 326 NVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICLKFETELC 156
NVI+RPVPGGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICL+FETE+C
Sbjct: 1287 NVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1343
>emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group]
Length = 1343
Score = 1716 bits (4443), Expect = 0.0
Identities = 838/1197 (70%), Positives = 973/1197 (81%), Gaps = 51/1197 (4%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V VEP YDPS +G GW
Sbjct: 147 LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGW 206
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA I FG V+LE+P FW D+ + SLKL P+HARLQNMTYSS++KVEV Q Y EK
Sbjct: 207 RHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEK 266
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+GND + KR + + I IGRLPVMV SNLCWL L +SDC FDSGGYFLIKG
Sbjct: 267 SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKG 326
Query: 3053 MEK---------------------------TFIAQEQRCLTRLWVVDKPSPTVSYLSEVK 2955
MEK FIAQEQ+CLTR+WV D+P VS+LS ++
Sbjct: 327 MEKDELQGCGGKLYSRNLCLNGKLETPTQKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIR 386
Query: 2954 QKRIYVKLVEAPKVEGFNGGRLISFYFFFATMPIWVMFFALGALSDKDVFEMIDLEGCEA 2775
++RIY+KL+++ E +GG++IS F +A MPIW+MFFALG SDKD+F++I++E C+A
Sbjct: 387 RRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDA 446
Query: 2774 GMTDIILATIKDAEEQFEGFRSIDKACQHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGH 2595
+ + I ATIK+++E EGFR DKA Q++D L+KN+KFPP E FD Y++KYLFP+I+G+
Sbjct: 447 CVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGN 506
Query: 2594 RSKALFLGYMVKCLLLSSVGKRKCDNKDDFRNKRLHLAGELLARELRTHVRHAERRMVKT 2415
R+KALFLGYMVKCLL++ GKRKCDNKDDFRNKRL LAGELL RELR H+RHAER MVK
Sbjct: 507 RNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKA 566
Query: 2414 MQRDLNGDNSLQLIERYWDASIITNGLNRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQ 2235
+QRDLN + LQ + Y DASIITNGLNRAF+TG+W HPYK+ ER +GIVATLRRTNPLQ
Sbjct: 567 LQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQ 626
Query: 2234 MISDMRKTRQQVLYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVL 2055
MISD+RKTRQ+V YAGKAGDARYPNPSYWGKLCF+STPDGENCGLVKNLAVTA VSS+V
Sbjct: 627 MISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVA 686
Query: 2054 QPSVDNLMECGMKKLDEVSLESMRNMGKVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDP 1875
P +D + CGM KL E+ E + M K+FLNGDWVG CSD +S RLRCMRR IDP
Sbjct: 687 PPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDP 746
Query: 1874 QVEIKIDKHQKEVRIFTDAGRILRPLLIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXX 1695
QVEIK DKHQ+EVR+F+DAGRILRPLL+V+NL KIR KG + SF +LM
Sbjct: 747 QVEIKRDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVE 806
Query: 1694 XXEDCQTAWGIKSFFAANE---------------------GSSLKYSHCELDPSFLLGLS 1578
ED ++AWGI++ F + E G Y+HCELD SFLLGLS
Sbjct: 807 EEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLS 866
Query: 1577 CSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYPQKPLFRTVVSEC 1398
C I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYPQ+PLF+TV+++C
Sbjct: 867 CGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADC 926
Query: 1397 LFSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSSLDRGMFRTEHFRS 1218
+ + + GRKD ARPEY+NGQNAIVAVNVHQGFNQEDS+VMN++SL+RGMFRTEHFR+
Sbjct: 927 IGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRN 986
Query: 1217 YKAEVENK---VLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASLQSGDIVIGKV 1047
YKAEVENK +KRLK+K+K+DFGK+ SK+GRVD+LDDDG PYVGASLQSGDIVIGKV
Sbjct: 987 YKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKV 1046
Query: 1046 SESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVV 867
SESGEDHSIKLKHTEKGMVQ+V+L+ANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVV
Sbjct: 1047 SESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVV 1106
Query: 866 GFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDSTRYATPFSTA 687
GFLE+QENFPFT +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA + RYATPF+TA
Sbjct: 1107 GFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTA 1166
Query: 686 SVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAEDKVKFRNTGP 507
S D I DQLH++GFSRWG+E VLNGRTGE M S+IFMGPTFYQRLIHMAEDKVKFRNTGP
Sbjct: 1167 SFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGP 1226
Query: 506 VHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICQKCHRAA 327
VHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMH+CQ C R A
Sbjct: 1227 VHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVA 1286
Query: 326 NVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICLKFETELC 156
NVI+RPVPGGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICL+FETE+C
Sbjct: 1287 NVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1343
>gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]
Length = 1170
Score = 1712 bits (4433), Expect = 0.0
Identities = 823/1145 (71%), Positives = 977/1145 (85%), Gaps = 1/1145 (0%)
Frame = -2
Query: 3587 KFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGWRH 3408
KFCK+A+R+FF E GL+SHQINSY++F+ HGLQ+LFD+LG+V+VEPGYDPSKKGS GW+H
Sbjct: 30 KFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGWKH 89
Query: 3407 AAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEKND 3228
A I FG V+LEKP FW ++ S+ P HARLQNMTY+S+L VEV +Q Y EK+D
Sbjct: 90 AIIKFGRVKLEKPVFWTGKDE---GSVDFKPWHARLQNMTYASRLIVEVTIQVYSLEKSD 146
Query: 3227 KAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKGME 3048
K+K+GND ++QKR + I IG LPVMV SNLC L +L++S+C+FD+GGYFL+KGME
Sbjct: 147 KSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKGME 206
Query: 3047 KTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYFFF 2868
K FIAQEQRCL RLW+ D+P T+S++SE+K++RIY+KLVE+ + E F+ ++I+ F +
Sbjct: 207 KVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVESTRSEDFSESKIITISFLY 266
Query: 2867 ATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKACQH 2688
ATMP+W+ FALG SDK+VF+MI ++ C+A + + I ATIK++++ E FR DKA Q+
Sbjct: 267 ATMPVWLXXFALGISSDKEVFDMIXMQDCDASVINTISATIKESDKLCEDFRKSDKARQY 326
Query: 2687 IDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNKDD 2508
+D LVK+++FPP ESFD Y++++LFP+I+G+R+KALFLGYMVKCLL++ GKRKCDNKDD
Sbjct: 327 VDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDD 386
Query: 2507 FRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGLNR 2328
FRNKRL L GELL RELR +R AE+RMVK +QRDLN D LQ +ERY DASI+TNGLNR
Sbjct: 387 FRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNR 446
Query: 2327 AFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPSYW 2148
AF+TG+W HPYK+AER SGIVATLRRTNPLQM+SD+RKTRQ+V YAGKAGDARYPNPSYW
Sbjct: 447 AFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYW 506
Query: 2147 GKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMGKV 1968
GKLCF+STPDGENCGLVKNLAVTA+VSS+V+QP +++ + CGM KL+++ E ++ M K+
Sbjct: 507 GKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCGMSKLNDIPTEHIQRMDKI 566
Query: 1967 FLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLLIV 1788
FLNG+WVG C + +S RLRCMRR IDPQVEIK DKH EVR+FTDAGRILRPLL+V
Sbjct: 567 FLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVFTDAGRILRPLLVV 626
Query: 1787 KNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKYSHCE 1608
+NL KIR+ KG + SF LM ED Q AWGI+ F + EG+ Y+HCE
Sbjct: 627 ENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEEEDIQCAWGIRHLFES-EGAISSYTHCE 685
Query: 1607 LDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYPQK 1428
LDPSFLLGLSC I PFANHNFARRVLYQ+EKHS QAIG+ST NP IRVDTLSHQLYYPQ+
Sbjct: 686 LDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQR 745
Query: 1427 PLFRTVVSECLF-STSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSSLD 1251
PLF+TV+++CL S +S GRK+ ARPEY+NGQNAIVAVNVHQGFNQEDSLVMN++SL+
Sbjct: 746 PLFKTVIADCLGRSDYASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLE 805
Query: 1250 RGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASLQS 1071
RGMFRTEH RSYKA+VENK +KRLKLKEK+DFGK +SK+GR D+LDDDG PYVGASLQ+
Sbjct: 806 RGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRXDNLDDDGLPYVGASLQT 865
Query: 1070 GDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDKFSS 891
DIVIGKVSESGEDHSIKLKHTEKGMVQKV+L+ANDEGKNFAVVTLRQVR+PCLGDKFSS
Sbjct: 866 NDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSS 925
Query: 890 MHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDSTR 711
MHGQKGVVGFLE+QENFPFT EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC+ + R
Sbjct: 926 MHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGTMR 985
Query: 710 YATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAEDK 531
YATPF+TASVD IA+QLHR+G+SRWGSE VLNGRTGE + S++FMGPTFYQRLIHM+EDK
Sbjct: 986 YATPFTTASVDVIAEQLHRAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDK 1045
Query: 530 VKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHI 351
VKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHERLF+LSDFSQMHI
Sbjct: 1046 VKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHI 1105
Query: 350 CQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICLKF 171
CQ C R ANV++R VPGGKKIRGPYC FC+S ENIVRINVPYGAKLLY ELFSMGICLKF
Sbjct: 1106 CQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKF 1165
Query: 170 ETELC 156
ET++C
Sbjct: 1166 ETQVC 1170
>ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
[Brachypodium distachyon]
Length = 1213
Score = 1704 bits (4413), Expect = 0.0
Identities = 815/1148 (70%), Positives = 962/1148 (83%), Gaps = 2/1148 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF+E GL+SHQINSY++FI HGLQ+LFD+LG+V VEPGYDPSKKG GW
Sbjct: 66 LEKFCKEASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSKKGPGGW 125
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA I FG V+LE+P FW D+ + SLKL P+HARLQNMTYSS+++VEV +Q Y EK
Sbjct: 126 RHAIIKFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQVYSMEK 185
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+GND + KR + + +TIGRLPVMVNS+LCWL L +SDC+FDSGGYFLIKG
Sbjct: 186 SDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVNSDLCWLHKLGESDCLFDSGGYFLIKG 245
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQRCLTR+WV D+P VSYLSE+K++R+Y+KL+++ NG ++IS F
Sbjct: 246 MEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKLIDSTTNNDLNGAKIISISF 305
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+A MPIW++FFALG SDK+VF+MID++ C+A + + I ATI++++E EGFR DKA
Sbjct: 306 LYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAIYATIRESDELCEGFRQSDKAR 365
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
+++D LVK++KFPP E F YV+KYLFP I+G+R+K+ FLGYMVKCLL++ GKRKCDNK
Sbjct: 366 KYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKSFFLGYMVKCLLMAFTGKRKCDNK 425
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L G+LL RELR H+RHAER MVK MQRDLN D LQ RY DASIITNG+
Sbjct: 426 DDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRDLQFPLRYLDASIITNGI 485
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF TG+W+HPY + ER SGIVATLRRTNPLQM+SD+RK+RQQV YAGK GDARYPNPS
Sbjct: 486 NRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKVGDARYPNPS 545
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGK+CF+STPDGENCGLVKNLAVTA+VSS+V+QP +D + CGM KLDE+S + + M
Sbjct: 546 YWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFVSCGMNKLDEISAKEIPKMD 605
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQ--KEVRIFTDAGRILRP 1800
K+FLNGDW+G C+D +S RLRCMRR IDPQVEIK DKHQ EVR+F+DAGRILRP
Sbjct: 606 KIFLNGDWIGSCTDPASFVMRLRCMRRANLIDPQVEIKRDKHQFPGEVRVFSDAGRILRP 665
Query: 1799 LLIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKY 1620
LL+V+NL KIR+ K +F L+ ED Q AWGI+ F ++ Y
Sbjct: 666 LLVVENLNKIRKSKDRPYTFQALLQQEIIEYIGVEEEEDIQCAWGIRHLFPSSGEKVSGY 725
Query: 1619 SHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLY 1440
+HCELD SFLLGLSC + PFANHNFARRVLYQ+EKHS QAIG+ST NP RVDT SHQLY
Sbjct: 726 THCELDLSFLLGLSCGLIPFANHNFARRVLYQSEKHSQQAIGYSTTNPLTRVDTHSHQLY 785
Query: 1439 YPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKS 1260
YPQ+PLF+TV ++C+ + ++GRKD ARPEY+NGQNAIVAVNVHQGFNQEDSLVMN++
Sbjct: 786 YPQRPLFKTVTADCIGRSDYTIGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRA 845
Query: 1259 SLDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGAS 1080
SL+RGMFRTEH RSYKAEVE K +KRLKLKEKVDFGK+ SK+GRVD+LDDDG PYVGAS
Sbjct: 846 SLERGMFRTEHIRSYKAEVETKEPTKRLKLKEKVDFGKMQSKRGRVDNLDDDGLPYVGAS 905
Query: 1079 LQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDK 900
LQSGDIVIGKVSESGEDHSIK+KHTEKGM Q+V+L+ANDEGKNFAVVTLRQVRSPC+GDK
Sbjct: 906 LQSGDIVIGKVSESGEDHSIKMKHTEKGMAQRVLLSANDEGKNFAVVTLRQVRSPCVGDK 965
Query: 899 FSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRD 720
FSSMHGQKGV+GFLE+QENFPFTC+GIVPD+VINPHAFPTRQTPGQLLEAALGKGIA
Sbjct: 966 FSSMHGQKGVIGFLESQENFPFTCQGIVPDVVINPHAFPTRQTPGQLLEAALGKGIALGG 1025
Query: 719 STRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMA 540
+ RYATPF+ AS++ I++QLH++GFSR G+E V+NGRTGE M S+IFMGP FYQRL HMA
Sbjct: 1026 AMRYATPFTPASLEVISEQLHKAGFSRSGAESVINGRTGERMHSLIFMGPNFYQRLTHMA 1085
Query: 539 EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ 360
EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ
Sbjct: 1086 EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ 1145
Query: 359 MHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGIC 180
MHIC+ C R ANV++R VPGGK+IRGPYC FC+S EN VRI VPYGAKLLY ELF MGIC
Sbjct: 1146 MHICRTCERVANVVMRSVPGGKRIRGPYCGFCRSSENTVRIAVPYGAKLLYQELFCMGIC 1205
Query: 179 LKFETELC 156
LKF+TE+C
Sbjct: 1206 LKFQTEIC 1213
>ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
[Brachypodium distachyon]
Length = 1213
Score = 1702 bits (4408), Expect = 0.0
Identities = 815/1148 (70%), Positives = 961/1148 (83%), Gaps = 2/1148 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF+E GL+SHQINSY++F+ HGLQ+LFD+LG+V VEPGYDPSKKG GW
Sbjct: 66 LEKFCKEASRSFFEEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPGYDPSKKGPGGW 125
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA I FG V+LE+P FW + + SLKL P+HARLQNMTYSS+++VEV +Q Y EK
Sbjct: 126 RHAIIKFGKVKLEEPVFWSGKIGIDEESLKLKPRHARLQNMTYSSKMEVEVNIQVYSMEK 185
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+GND + KR + + +TIGRLPVMVNS+LCWL L +SDC+FDSGGYFLIKG
Sbjct: 186 SDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVNSDLCWLHKLGESDCLFDSGGYFLIKG 245
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQRCLTR+WV D+P VSYLSE+K++R+Y+KL+++ NG ++IS F
Sbjct: 246 MEKIFIAQEQRCLTRIWVADRPCWNVSYLSEMKRRRVYIKLIDSTTNNDLNGAKIISISF 305
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+A MPIW++FFALG SDK+VF+MID++ C+A + + I ATI++++E EGFR DKA
Sbjct: 306 LYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAISATIRESDELCEGFRQSDKAR 365
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
+++D LVK++KFPP E F YV+KYLFP I+G+R+KA FLGYMVKCLL++ GKRKCDNK
Sbjct: 366 KYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKAFFLGYMVKCLLMAFTGKRKCDNK 425
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L G+LL RELR H+RHAER MVK MQRDLN D LQ RY DASIITNG+
Sbjct: 426 DDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRDLQFPLRYLDASIITNGI 485
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF TG+W+HPY + ER SGIVATLRRTNPLQM+SD+RK+RQQV YAGK GDARYPNPS
Sbjct: 486 NRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKVGDARYPNPS 545
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGK+CF+STPDGENCGLVKNLAVTA+VSS+V+QP +D + CGM KLDE+S + + M
Sbjct: 546 YWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFVSCGMNKLDEISAKEIPKMD 605
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQ--KEVRIFTDAGRILRP 1800
K+FLNGDW+G C+D +S RLRCMRR IDPQVEIK DKHQ EVR+F+DAGRILRP
Sbjct: 606 KIFLNGDWIGSCTDPASFVMRLRCMRRANLIDPQVEIKRDKHQFPGEVRVFSDAGRILRP 665
Query: 1799 LLIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKY 1620
LL+V+NL KIR+ K +F L+ ED Q AWGI+ F ++ Y
Sbjct: 666 LLVVENLNKIRKSKDRHYTFQALLQQEIIEYIGVEEEEDIQCAWGIRHLFPSSGEKVSGY 725
Query: 1619 SHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLY 1440
+HCELD SFLLGLSC + PFANHNFARRVLYQ+EKHS QAIG+ST NP RVDT SHQLY
Sbjct: 726 THCELDLSFLLGLSCGLIPFANHNFARRVLYQSEKHSQQAIGYSTTNPLTRVDTHSHQLY 785
Query: 1439 YPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKS 1260
YPQ+PLF+TV ++C+ + ++GRKD ARPEY+NGQNAIVAVNVHQGFNQEDSLVMN++
Sbjct: 786 YPQRPLFKTVTADCIGRSDYTIGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRA 845
Query: 1259 SLDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGAS 1080
SL+RGMFRTEH RSYKAEVE K KRLKLKEKVDFGK+ SK+GRVD+LDDDG PYVGAS
Sbjct: 846 SLERGMFRTEHIRSYKAEVETKEPIKRLKLKEKVDFGKMQSKRGRVDNLDDDGLPYVGAS 905
Query: 1079 LQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDK 900
LQSGDIVIGKVSESGEDHSIK+KHTEKGMVQ+V+L+ANDEGKNFAVVTLRQVRSPC+GDK
Sbjct: 906 LQSGDIVIGKVSESGEDHSIKMKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCVGDK 965
Query: 899 FSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRD 720
FSSMHGQKGV+GFLE+QENFPFTC+GIVPD+VINPHAFPTRQTPGQLLEAALGKGIA
Sbjct: 966 FSSMHGQKGVIGFLESQENFPFTCQGIVPDVVINPHAFPTRQTPGQLLEAALGKGIALGG 1025
Query: 719 STRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMA 540
+ RYATPF+ AS++ I++QLH++GFSR G+E V+NGRTGE M S+IFMGP FYQRL HMA
Sbjct: 1026 AMRYATPFTPASLEVISEQLHKAGFSRGGAESVINGRTGERMHSLIFMGPNFYQRLTHMA 1085
Query: 539 EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ 360
EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ
Sbjct: 1086 EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ 1145
Query: 359 MHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGIC 180
MHIC+ C R ANV++R VPGGK+IRGPYC FC+S EN VRI VPYGAKLLY ELF MGIC
Sbjct: 1146 MHICRTCERVANVVMRGVPGGKRIRGPYCGFCRSSENTVRIAVPYGAKLLYQELFCMGIC 1205
Query: 179 LKFETELC 156
LKF+TE+C
Sbjct: 1206 LKFQTEIC 1213
>gb|EMS61833.1| DNA-directed RNA polymerase D subunit 2a [Triticum urartu]
Length = 1269
Score = 1693 bits (4384), Expect = 0.0
Identities = 815/1146 (71%), Positives = 958/1146 (83%), Gaps = 2/1146 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E+GL+SHQINSY++F+ HGLQ+LFD+LG+V VEP YD SKKG GW
Sbjct: 88 LEKFCKEASRSFFDEFGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDLSKKGPGGW 147
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA I FG V+LEKP FW +DV + SLKL P+HARLQNMTYSS+++VEV +Q Y EK
Sbjct: 148 KHAVIRFGRVKLEKPVFWSGRDDVDEESLKLKPRHARLQNMTYSSKMEVEVHIQIYSMEK 207
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DK+K+ D + KRVL D + IGRLPVMVNSNLCWL+ L +SDC++DSGGYFLI+G
Sbjct: 208 SDKSKTEKDPFGHKRVLMDETHVVNIGRLPVMVNSNLCWLRELRESDCLYDSGGYFLIRG 267
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
MEK FIAQEQRCLTR+W+ D+P TVSYLSE+K++RIYVKL+++ K F+G ++IS F
Sbjct: 268 MEKIFIAQEQRCLTRIWIADRPVWTVSYLSEIKRRRIYVKLIDSTKNNDFSGSKIISISF 327
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+A MPIW+MFFALG SDK+ F+MID+ C+A + + I ATI +++E EGFR DKA
Sbjct: 328 LYANMPIWLMFFALGVSSDKEAFDMIDMGDCDASVINAISATISESDELCEGFRKSDKAR 387
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q +D LVK++KFPP ESFD Y++KYLFP I G+R+KALFLGYMVKCLL++ GKR+CDNK
Sbjct: 388 QCVDDLVKSSKFPPGESFDDYIAKYLFPGIKGNRNKALFLGYMVKCLLMAFTGKRRCDNK 447
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL L G+LL RELR H+RHAER MVK MQRDLN D L+ RY DASIITNG+
Sbjct: 448 DDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRDLEFPTRYLDASIITNGI 507
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF TG+W HPYK+ ER SGIVATLRRTNPLQM+SD+RK+RQQV YAGKAGDARYPNPS
Sbjct: 508 NRAFATGSWCHPYKRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKAGDARYPNPS 567
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGK+CF+STPDGENCGLVKNLAVTA+VSS+V QP +D + CGM KLDE+ + + M
Sbjct: 568 YWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVAQPLIDRFVSCGMNKLDEIPAKQIPKMD 627
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQK--EVRIFTDAGRILRP 1800
K+FLNGDWVG C+D +S RLRCMRRG IDPQVEIK DKHQ EVR+F+DAGR+LRP
Sbjct: 628 KIFLNGDWVGSCADPASFVMRLRCMRRGGLIDPQVEIKRDKHQSPGEVRVFSDAGRLLRP 687
Query: 1799 LLIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKY 1620
LL+V+NL KI + KG SF LM ED Q AWGI+ F ++ Y
Sbjct: 688 LLVVENLNKITKRKGSPYSFQALMQQEIIEFIGVEEEEDIQCAWGIRHLFQSSGDEVSGY 747
Query: 1619 SHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLY 1440
+HCELD SFLLGLSCS+ PFANHNFARRVLYQAEKHS QAIG+ST NP RVDTLSHQLY
Sbjct: 748 THCELDLSFLLGLSCSLIPFANHNFARRVLYQAEKHSQQAIGYSTTNPLTRVDTLSHQLY 807
Query: 1439 YPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKS 1260
YPQ+PLF+TV ++C+ + + GRKD ARPEY+NGQNAIVAVN+HQGFNQEDSLVMN++
Sbjct: 808 YPQRPLFKTVSADCIGRSDYTFGRKDDFARPEYFNGQNAIVAVNIHQGFNQEDSLVMNRA 867
Query: 1259 SLDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGAS 1080
SL+RGMFRTE RSYKAEVE K SKRLK+KEKV+FGK++SK+GRVD+LDDDG P+VG+S
Sbjct: 868 SLERGMFRTELMRSYKAEVETKGPSKRLKMKEKVNFGKMESKRGRVDNLDDDGLPFVGSS 927
Query: 1079 LQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDK 900
LQ GDI+IGKVSESGEDHSIKLKHTEKGMVQ+V+L+ANDEGK+FAVV+LRQVRSPC+GDK
Sbjct: 928 LQIGDIIIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEGKHFAVVSLRQVRSPCVGDK 987
Query: 899 FSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRD 720
FSSMHGQKGVVGFLE+QENFPFTC+GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA
Sbjct: 988 FSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGG 1047
Query: 719 STRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMA 540
+YATPF+TA+V+ I++QLH+ GFSR G+E VLNG+TG+ M +IF GP FYQRLIHMA
Sbjct: 1048 KIKYATPFTTATVEVISEQLHKLGFSRGGAESVLNGQTGKRMQQLIFAGPNFYQRLIHMA 1107
Query: 539 EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ 360
EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFS+
Sbjct: 1108 EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSE 1167
Query: 359 MHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGIC 180
M ICQ C R ANVI+RPV GG+KIRGPYC FC+S ENIV+I VPYGAKLLY ELFSMGIC
Sbjct: 1168 MRICQTCERGANVIMRPVSGGRKIRGPYCGFCKSSENIVKIAVPYGAKLLYQELFSMGIC 1227
Query: 179 LKFETE 162
LKF+TE
Sbjct: 1228 LKFQTE 1233
>ref|XP_003580654.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
[Brachypodium distachyon]
Length = 1236
Score = 1678 bits (4346), Expect = 0.0
Identities = 818/1167 (70%), Positives = 963/1167 (82%), Gaps = 3/1167 (0%)
Frame = -2
Query: 3647 SASPESFFKEMEKESDLWMEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLG 3468
S S E F +M S +EKFCK+A+R+FF E GL+SHQINSY+DFI HGLQ+LFD+LG
Sbjct: 73 SESHEEFPIDMSLTS---LEKFCKEASRSFFDEIGLISHQINSYNDFISHGLQELFDSLG 129
Query: 3467 DVVVEPGYDPSKKGSEGWRHAAISFGNVRLEKPEFWPES-NDVHDTSLKLLPKHARLQNM 3291
+V VEP YDPSKKG GWRHA I FG V+L++P FW + D ++ +LKL P+HARLQNM
Sbjct: 130 EVTVEPSYDPSKKGPGGWRHAIIKFGKVKLQEPVFWSDKCEDKYEEALKLKPRHARLQNM 189
Query: 3290 TYSSQLKVEVRVQTYVQEKNDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLK 3111
TYSS+++VE+ +Q Y EK+DKAK+ ND + KR + + +++GRLPVMVNSNLCWL
Sbjct: 190 TYSSKMEVEMNIQVYSMEKSDKAKTENDHFGHKRDIINETHWVSVGRLPVMVNSNLCWLH 249
Query: 3110 TLDKSDCIFDSGGYFLIKGMEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKL 2931
L +SDC+FDSGGYFLIKGMEK FIAQEQRCLTR+WV D+P TVSY+SE+K+KR YVKL
Sbjct: 250 KLGESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVDDRPCWTVSYMSEIKRKRTYVKL 309
Query: 2930 VEAPKVEGFNGGRLISFYFFFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILA 2751
+++ K F+ ++IS F +A MP+W+MFFALG SDK+VF++ID + +A + ++I A
Sbjct: 310 IDSTKSNDFSESKIISISFLYANMPVWLMFFALGISSDKEVFDIIDFKDSDASVINMISA 369
Query: 2750 TIKDAEEQFEGFRSIDKACQHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLG 2571
TI ++ E EGFR DKA Q++D LVK++KFPP ESFD YV+++LFP I+G+R+KA FLG
Sbjct: 370 TISESNELCEGFRKSDKARQYVDDLVKSSKFPPAESFDDYVARFLFPGISGNRNKAFFLG 429
Query: 2570 YMVKCLLLSSVGKRKCDNKDDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGD 2391
YMVK LL++ GK KCDN+D FRNKRL L GELL RELR H+RHAER MVK MQRDLN D
Sbjct: 430 YMVKYLLMAFTGKLKCDNRDAFRNKRLELPGELLGRELRAHLRHAERLMVKAMQRDLNSD 489
Query: 2390 NSLQLIERYWDASIITNGLNRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKT 2211
LQ Y D +IITNG+NRAF TG+W HPYK+ ER SG+VATLRRTNPLQM+SD+RK+
Sbjct: 490 RDLQFPLGYLDPTIITNGINRAFATGSWCHPYKRNERCSGVVATLRRTNPLQMMSDLRKS 549
Query: 2210 RQQVLYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLM 2031
RQQV YAGKAGDARYPNPSYWGK+CF+STPDGENCGLVKNLAVTA+VSS+V+QP +D +
Sbjct: 550 RQQVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFV 609
Query: 2030 ECGMKKLDEVSLESMRNMGKVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDK 1851
CGM KLDE+ + M K+FLNG+WVG C+D +S RLRCMRRG IDPQVEIK DK
Sbjct: 610 SCGMNKLDEIPAGQIPKMDKIFLNGNWVGSCTDPASFVMRLRCMRRGNLIDPQVEIKRDK 669
Query: 1850 HQ--KEVRIFTDAGRILRPLLIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQ 1677
HQ EVR+F+DAGRILRPLL+V+NL KIR+ K G+ SF LM ED
Sbjct: 670 HQIPGEVRVFSDAGRILRPLLVVENLNKIRKPKDGSYSFQALMQQEIIEYIGVEEEEDIL 729
Query: 1676 TAWGIKSFFAANEGSSLKYSHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAI 1497
AWGI+ F + Y+HCELD SFLLGLSCS+ PFANHNFARRVLYQ+EKHS QAI
Sbjct: 730 CAWGIRHLFPGSGEDFSGYTHCELDLSFLLGLSCSLIPFANHNFARRVLYQSEKHSQQAI 789
Query: 1496 GFSTVNPSIRVDTLSHQLYYPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIV 1317
G+ST N RVDTLSHQLYYPQ+PLF+TV ++C+ + ++GR D ARPEY+NGQNAIV
Sbjct: 790 GYSTTNQLTRVDTLSHQLYYPQRPLFKTVTADCIGRSDYTIGRTDDFARPEYFNGQNAIV 849
Query: 1316 AVNVHQGFNQEDSLVMNKSSLDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDS 1137
AVNVHQGFNQEDSLVMN++SL+RGMFRTE RSYKA+VE K +KRLKLKEKVDFGK+ S
Sbjct: 850 AVNVHQGFNQEDSLVMNRASLERGMFRTELIRSYKADVETKEPAKRLKLKEKVDFGKMQS 909
Query: 1136 KKGRVDSLDDDGFPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEG 957
K+GRVDSLDDDG PYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ+V+L+ANDE
Sbjct: 910 KRGRVDSLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEE 969
Query: 956 KNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTR 777
KNFAVVTLRQVRSPC+GDKFSSMHGQKGV+GFLE+QENFPFTC+GIVPDIVINPHAFPTR
Sbjct: 970 KNFAVVTLRQVRSPCVGDKFSSMHGQKGVIGFLESQENFPFTCQGIVPDIVINPHAFPTR 1029
Query: 776 QTPGQLLEAALGKGIACRDSTRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEM 597
QTPGQLLEAALGKGIA + RYATPF+TAS++ I++QLH++GFS G+E VLNG+TGE
Sbjct: 1030 QTPGQLLEAALGKGIALGSAMRYATPFTTASLEVISEQLHKAGFSGGGTESVLNGQTGER 1089
Query: 596 MSSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 417
M S+IFMGP FYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA
Sbjct: 1090 MHSLIFMGPNFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 1149
Query: 416 HGAAANLHERLFMLSDFSQMHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRI 237
HGAAANLHERLFMLSDF+QMHICQ C RAANV++R +PGGKKIRGPYC FC+S EN VRI
Sbjct: 1150 HGAAANLHERLFMLSDFAQMHICQTCQRAANVVMRAIPGGKKIRGPYCGFCRSSENKVRI 1209
Query: 236 NVPYGAKLLYMELFSMGICLKFETELC 156
VPYGAKLLY ELFSMGICLKF+TE+C
Sbjct: 1210 AVPYGAKLLYQELFSMGICLKFKTEVC 1236
>gb|EMT10124.1| DNA-directed RNA polymerase II subunit RPB2 [Aegilops tauschii]
Length = 1324
Score = 1640 bits (4246), Expect = 0.0
Identities = 809/1205 (67%), Positives = 954/1205 (79%), Gaps = 60/1205 (4%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+A+R+FF E+GL+SHQINSY++F+ HGLQ+LFD+LG+V VEP YD SKKG GW
Sbjct: 88 LEKFCKEASRSFFDEFGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDLSKKGPGGW 147
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQ------ 3252
+HA I FG V+LEKP FW +DV + SLKL P+HARLQNMTYSS+++VEV +Q
Sbjct: 148 KHAVIRFGRVKLEKPVFWSGRDDVDEESLKLKPRHARLQNMTYSSKMEVEVHIQQNSPLT 207
Query: 3251 -----------------------TYV---------QEKNDKAKSGNDLYIQKRVLGDTKR 3168
TYV EK+DK+K+ D + KRVL D
Sbjct: 208 EHEMEQSRNKWLLDVPRLAQQSATYVVVDITHIYSMEKSDKSKTEKDPFGHKRVLMDETH 267
Query: 3167 EITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKGMEKTFIAQEQRCLTRLWVVDKP 2988
+ IGRLPVMVNSNLCWL+ L +SDC++DSGGYFLI+GMEK FIAQEQRCLTR+W+ D+P
Sbjct: 268 VVNIGRLPVMVNSNLCWLRELRESDCLYDSGGYFLIRGMEKIFIAQEQRCLTRIWIADRP 327
Query: 2987 SPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYFFFATMPIWVMFFALGALSDKDV 2808
TVSYLSE+K++RIYVKL+++ K F+G ++IS F +A +PIW+MFFALG SDK+
Sbjct: 328 VWTVSYLSEIKRRRIYVKLIDSTKNNDFSGSKIISISFLYANLPIWLMFFALGVSSDKEA 387
Query: 2807 FEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKACQHIDTLVKNAKFPPTESFDQYV 2628
F+MID+ C+A + + I ATI +++E EGFR DKA Q +D VK++KFPP ESFD Y+
Sbjct: 388 FDMIDMGDCDASVINAISATISESDELCEGFRKSDKARQCVDDKVKSSKFPPGESFDDYI 447
Query: 2627 SKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNKDDFRNKRLHLAGELLARELRTH 2448
+KYLFP I G+R+KALFLGYMVKCLL++ GKR+CDNKDDFRNKRL L G+LL RELR H
Sbjct: 448 AKYLFPGIKGNRNKALFLGYMVKCLLMAFTGKRRCDNKDDFRNKRLELPGQLLGRELRAH 507
Query: 2447 VRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGLNRAFTTGAWTHPYKKAERSSGI 2268
+RHAER MVK MQRDLN D L+ RY DASIITNG+NRAF TG+W HPY++ ER SGI
Sbjct: 508 LRHAERLMVKAMQRDLNSDRDLEFPMRYLDASIITNGINRAFATGSWCHPYRRNERCSGI 567
Query: 2267 VATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL 2088
VATLRRTNPLQM+SD+RK+RQQV YAGKAGDARYPNPSYWGK+CF+STPDGENCGLVKNL
Sbjct: 568 VATLRRTNPLQMMSDLRKSRQQVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNL 627
Query: 2087 AVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMGKVFLNGDWVGVCSDMSSIADRL 1908
AVTA+VSS+V QP +D + CGM KLDE+ + + M K+FLNGDWVG C+D +S RL
Sbjct: 628 AVTAIVSSRVAQPLIDRFVSCGMNKLDEIPAKKIPQMDKIFLNGDWVGSCADPASFVMRL 687
Query: 1907 RCMRRGKQIDPQVEIKIDKHQK--EVRIFTDAGRILRPLLIVKNLKKIRELKGGACSFSY 1734
RCMRRG IDPQVEIK DKHQ EVR+F+DAGR+LRPLL+V+NL KI + KG SF
Sbjct: 688 RCMRRGGLIDPQVEIKRDKHQSPGEVRVFSDAGRLLRPLLVVENLNKITKRKGSPYSFQA 747
Query: 1733 LMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKYSHCELDPSFLLGLSCSITPFAN 1554
LM ED Q AWGI+ F ++ Y+HCELD SFLLGLSC + PFAN
Sbjct: 748 LMQQEIIEFIGVEEEEDIQCAWGIRHLFQSSGEEVSGYTHCELDLSFLLGLSCGLIPFAN 807
Query: 1553 HNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYYPQKPLFRTVVSECLFSTSSSV 1374
HNFARRVLYQAEKHS QAIG+ST NP RVDTLSHQLYYPQ+PLF+TV ++C+ + +
Sbjct: 808 HNFARRVLYQAEKHSQQAIGYSTTNPLTRVDTLSHQLYYPQRPLFKTVSADCIGRSDYTF 867
Query: 1373 GRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKSSLDRGMFRTEHFRSYKAEVENK 1194
GRKD ARPEY+NGQNAIVAVN+HQGFNQEDSLVMN++SL+RGMFRTE RSYKAEVE K
Sbjct: 868 GRKDDFARPEYFNGQNAIVAVNIHQGFNQEDSLVMNRASLERGMFRTELMRSYKAEVETK 927
Query: 1193 VLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGASLQSGDIVIGKVSESGEDHSIKL 1014
SKRLK+KEKV+FGK++SK+GRVD+LDDDG P+VG+SLQ GDI+IGKVSESGEDHSIKL
Sbjct: 928 GPSKRLKMKEKVNFGKMESKRGRVDNLDDDGLPFVGSSLQIGDIIIGKVSESGEDHSIKL 987
Query: 1013 KHTEKGMVQKVVLAANDEGKNFAVVTLRQ--------------------VRSPCLGDKFS 894
KHTEKGMVQ+V+L+ANDEGK+FAVV+LRQ VRSPC+GDKFS
Sbjct: 988 KHTEKGMVQRVLLSANDEGKHFAVVSLRQVHLVSFFENLRCTYYYFRLKVRSPCVGDKFS 1047
Query: 893 SMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRDST 714
SMHGQKGVVGFLE+QENFPFTC+GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA
Sbjct: 1048 SMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGKI 1107
Query: 713 RYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMAED 534
RYATPF+TA+V+ I++QLH+ GFSR G+E VLNG+TG+ M +IF GP FYQRLIHMAED
Sbjct: 1108 RYATPFTTATVEVISEQLHKLGFSRGGAESVLNGQTGKRMQQLIFAGPNFYQRLIHMAED 1167
Query: 533 KVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMH 354
KVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL LSDFS
Sbjct: 1168 KVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLLTLSDFS--- 1224
Query: 353 ICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGICLK 174
+ C R ANVI+RPV GG+KIRGPYC FC+S ENIV+I VPYGAKLLY ELFSMGICLK
Sbjct: 1225 --ETCERGANVIMRPVSGGRKIRGPYCGFCKSSENIVKIAVPYGAKLLYQELFSMGICLK 1282
Query: 173 FETEL 159
F+TE+
Sbjct: 1283 FQTEV 1287
>gb|EMS59628.1| DNA-directed RNA polymerase D subunit 2a [Triticum urartu]
Length = 1225
Score = 1548 bits (4009), Expect = 0.0
Identities = 760/1146 (66%), Positives = 910/1146 (79%), Gaps = 2/1146 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+AAR+FF E GL+SHQINSY+DFI HGLQ+L D+LG++ V+P YDPSK + W
Sbjct: 90 LEKFCKEAARSFFTEKGLVSHQINSYNDFISHGLQELVDSLGEITVDPDYDPSKSVGD-W 148
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
RHA + FG V LEKP FW +++++ + L+L P HARLQNMTYSS++ VE+ VQ Y +
Sbjct: 149 RHATVKFGRVELEKPTFWADNSELDEQKLRLKPVHARLQNMTYSSKMNVEMTVQVYSLNQ 208
Query: 3233 NDKAKSGNDLYIQKR-VLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIK 3057
+DK+K+G D YIQK+ +L + +TIGRLPVMV S+LCWL L +++C FD GGYFLIK
Sbjct: 209 SDKSKTGKDPYIQKKLILSPETKWVTIGRLPVMVKSSLCWLYELQETECQFDYGGYFLIK 268
Query: 3056 GMEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFY 2877
G EK FIA+E RCL+R+WV + PS SYLS++++++IYVKLV + + +GF+ ++I+
Sbjct: 269 GTEKAFIAEEGRCLSRIWVTNSPSWDASYLSQIRREKIYVKLVPSKENDGFH--KVINLS 326
Query: 2876 FFFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKA 2697
F ATMPIW+MFFALG +DK+ F+MID++ C+A + +I+ ATI+ + EQ EGFR +A
Sbjct: 327 FLGATMPIWIMFFALGVSTDKEAFDMIDIQDCDASLVNILSATIRQSHEQCEGFRGGGRA 386
Query: 2696 CQHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDN 2517
Q++D ++ KFPP ESFD YV +YLFP ++ +R KALFLGYM+KCLL++ G+RKCDN
Sbjct: 387 RQYVDEYIRKTKFPPEESFDGYVGRYLFPEVSDNRCKALFLGYMIKCLLMAYCGRRKCDN 446
Query: 2516 KDDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNG 2337
KDDFRNKRL LA +LL REL H+RHA RRMVK MQ+ L+GD LQ+++ Y DASIITNG
Sbjct: 447 KDDFRNKRLDLACQLLRRELWGHLRHAARRMVKVMQKHLSGDGDLQVLDHYVDASIITNG 506
Query: 2336 LNRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNP 2157
LNRAF+TG+W HPYK R SGIVATLRRTNPLQM+SDMRKTRQ Y G AGDARYPNP
Sbjct: 507 LNRAFSTGSWCHPYKYG-RCSGIVATLRRTNPLQMMSDMRKTRQLSAYWGSAGDARYPNP 565
Query: 2156 SYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNM 1977
SYWGKLCF+STPDGE CG VKNLA +AVVSS + +P +D + CGMKKLDEV ++ +
Sbjct: 566 SYWGKLCFMSTPDGEKCGFVKNLAASAVVSSVMREPLIDLFVSCGMKKLDEVLVQDIGGT 625
Query: 1976 GKVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPL 1797
K+FLNGD VGV + LR MRR KQIDPQVEIK DK KEV +F+DAGRILRPL
Sbjct: 626 EKIFLNGDLVGVSAYPGKFVTNLRNMRRSKQIDPQVEIKRDKLHKEVHVFSDAGRILRPL 685
Query: 1796 LIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEGSSLKY- 1620
LIV+NLK I + GG+ SF LM ED Q A GIK F+ ++ L Y
Sbjct: 686 LIVENLKSIAKPNGGSYSFQQLMDQNIIELIGAEEEEDIQCACGIKDLFSGDQKEGLLYY 745
Query: 1619 SHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLY 1440
SHCELDPSFLLGLSC I PF NHN A+RVL QAEK S QAIG+S N RVDTL HQ+Y
Sbjct: 746 SHCELDPSFLLGLSCGIIPFVNHNAAKRVLMQAEKISQQAIGYSPTNSQYRVDTLFHQMY 805
Query: 1439 YPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNKS 1260
YPQ+PLF+TV+S+CL K + RPEY+NGQNAIV+VNVHQGFNQEDSLV N++
Sbjct: 806 YPQRPLFKTVLSDCL--------GKRGLTRPEYFNGQNAIVSVNVHQGFNQEDSLVFNRA 857
Query: 1259 SLDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGAS 1080
SL+RGMFRT HF+SYKA++ENK +++RLK +EK+DFGK SKKGRVDSLD DG PYVGAS
Sbjct: 858 SLERGMFRTLHFKSYKAQIENKEVTRRLKHREKIDFGKTQSKKGRVDSLDIDGLPYVGAS 917
Query: 1079 LQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGDK 900
LQ+GDIVIGKVSESGEDHS KL HTE+GMV KVVL+AND+GKN AVVTLRQVR PC+GDK
Sbjct: 918 LQTGDIVIGKVSESGEDHSRKLMHTERGMVDKVVLSANDDGKNSAVVTLRQVRQPCVGDK 977
Query: 899 FSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACRD 720
F+SMHGQKGVVG L++QENFPFTC+GIVPDIVINPH FPTRQTPGQLLEAALGKGIA
Sbjct: 978 FASMHGQKGVVGLLDSQENFPFTCQGIVPDIVINPHGFPTRQTPGQLLEAALGKGIALGG 1037
Query: 719 STRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHMA 540
+R+ATPF+T SVD I +QLH++GFSRWG E VLNG GE M S++FMGPT+YQRL HMA
Sbjct: 1038 MSRFATPFTTPSVDVITEQLHKAGFSRWGGESVLNGHNGERMRSLVFMGPTYYQRLTHMA 1097
Query: 539 EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQ 360
EDKVK RNTGPVHPLTRQPV DRKRFGGVKFGEMERDCLLAHGA ANL ERLF LSD SQ
Sbjct: 1098 EDKVKLRNTGPVHPLTRQPVVDRKRFGGVKFGEMERDCLLAHGATANLQERLFTLSDVSQ 1157
Query: 359 MHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMGIC 180
+HICQ C R ANV+LRPV GG+K+RGPYC FC+S ENI+RI VPYGAKLLY ELFSMGIC
Sbjct: 1158 LHICQVCERVANVVLRPVEGGRKVRGPYCGFCKSAENILRIKVPYGAKLLYQELFSMGIC 1217
Query: 179 LKFETE 162
LKFETE
Sbjct: 1218 LKFETE 1223
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 1543 bits (3996), Expect = 0.0
Identities = 754/1164 (64%), Positives = 925/1164 (79%), Gaps = 9/1164 (0%)
Frame = -2
Query: 3620 EMEKESDLWMEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYD 3441
E++ + +++ FCK A +FF E+GL+ HQINS++DFI++G+Q +FD+ G++ VEPGYD
Sbjct: 37 EIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYD 96
Query: 3440 PSKKGSEGWRHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEV 3261
PSK+G WR+A++ FG V LE+P W +D + SL LP+HARLQNMTYSS++K +V
Sbjct: 97 PSKRGEGDWRYASVRFGKVTLERPRVWAGESDGKE-SLNFLPRHARLQNMTYSSRMKAQV 155
Query: 3260 RVQTYVQE--KNDKAKSGND-LYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDC 3090
Q Y Q+ ++DK K+G D Y++K+V+ + R+I IGR+PVMV S LCW+ +++ DC
Sbjct: 156 HFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDC 215
Query: 3089 IFDSGGYFLIKGMEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVE 2910
+D GGYFLIKG EKTFIAQEQ CL RLWV P+ V+Y K+KR+YVKL E PK E
Sbjct: 216 EYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDE 274
Query: 2909 GFNGG-RLISFYFFFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAE 2733
GG ++++ YF +PIW++FFALGA SDK+V ++ID +AG+++I++A+I +A+
Sbjct: 275 NNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEAD 334
Query: 2732 EQFEG----FRSIDKACQHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYM 2565
+ E FR A +D LVK+ KFPP ES + +SKYLFPN +G + KA FLGYM
Sbjct: 335 REAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYM 394
Query: 2564 VKCLLLSSVGKRKCDNKDDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNS 2385
VKCLL + G+RKCDN+DDFRNKRL LAGELL RELR H+RHAERRMVK MQR+L GD
Sbjct: 395 VKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRD 454
Query: 2384 LQLIERYWDASIITNGLNRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQ 2205
L+ IE Y DASIITNGL+RAF+TG W+HP+K+ ER SG+VATLRRTNPLQM +DMRKTRQ
Sbjct: 455 LRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQ 514
Query: 2204 QVLYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMEC 2025
QV Y GK GDARYP+PS+WGK+CFLSTPDGENCGLVKNLA+T +VS++VL P VD L +C
Sbjct: 515 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDC 574
Query: 2024 GMKKLDEVSLESMRNMGKVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQ 1845
GM+KL + + + KVFL+GDWVGVC D S LR RR K++ QVEIK D+ Q
Sbjct: 575 GMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQ 634
Query: 1844 KEVRIFTDAGRILRPLLIVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWG 1665
EVRIF+DAGRILRPLL+V+NLKK++ KG +F L+ EDC TAWG
Sbjct: 635 GEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWG 694
Query: 1664 IKSFFAANEGSSLKYSHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFST 1485
IK ++ +KY+HCELD SFLLGLSC I P+ANH+ ARRVLYQ+EKHS QAIGFST
Sbjct: 695 IKYLLKGHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFST 754
Query: 1484 VNPSIRVDTLSHQLYYPQKPLFRTVVSECLFSTSSSVGRKDTIARPEYYNGQNAIVAVNV 1305
NP+IRVDTLSHQLYYPQ+PLFRT++S+CL S G K + RPEY+NGQ AIVAVNV
Sbjct: 755 TNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNV 814
Query: 1304 HQGFNQEDSLVMNKSSLDRGMFRTEHFRSYKAEVE-NKVLSKRLKLKEKVDFGKIDSKKG 1128
H G+NQEDSLVMN++SL+RGMFR+EH RSYK+EV+ N+ L K+ K ++ V FGK+ SK G
Sbjct: 815 HLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIG 874
Query: 1127 RVDSLDDDGFPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNF 948
RVDSLDDDGFP++GA+LQ+GDIVIG+ +ESG DHSIKLKHTE+GMVQKVV++AND+GKNF
Sbjct: 875 RVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNF 934
Query: 947 AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTP 768
AVV+LRQVR+PCLGDKFSSMHGQKGV+GFLE+QENFPFT +GIVPDIVINPHAFP+RQTP
Sbjct: 935 AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 994
Query: 767 GQLLEAALGKGIACRDSTRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSS 588
GQLLEAALGKGIAC R+ATPFST SVD IADQLHR+GFSRWG ERV NGRTGEM+ S
Sbjct: 995 GQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRS 1054
Query: 587 MIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 408
+IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCL+AHGA
Sbjct: 1055 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGA 1114
Query: 407 AANLHERLFMLSDFSQMHICQKCHRAANVILRPVPGGKKIRGPYCNFCQSGENIVRINVP 228
AANLHERLF LSD + MHIC++C +NVI R V GG+K+RGPYC +C+S E IV++NVP
Sbjct: 1115 AANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVP 1174
Query: 227 YGAKLLYMELFSMGICLKFETELC 156
YGAKLL ELFSMGI LKFET+LC
Sbjct: 1175 YGAKLLCQELFSMGISLKFETQLC 1198
>gb|AFW57180.1| putative DNA-directed RNA polymerase subunit family protein [Zea
mays]
Length = 1259
Score = 1541 bits (3989), Expect = 0.0
Identities = 754/1152 (65%), Positives = 913/1152 (79%), Gaps = 7/1152 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFCK+AAR+FF E GL+SHQINSYD F+ HGLQ+LFD+LG++ VEP YDPS K W
Sbjct: 112 LEKFCKEAARSFFSETGLVSHQINSYDHFVSHGLQELFDSLGEITVEPDYDPSNKHG-AW 170
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA + FG V+L++P F E++D+ + LK P+HARLQ MTY+S++ VE+ VQ Y+ +
Sbjct: 171 KHATVKFGRVKLDEPVFMLENSDLEEQDLKFKPRHARLQKMTYASRMNVEMTVQVYIFDT 230
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+G D ++ KR + ++I IG LPVMV SNLCWL K DC FD GGYFLIKG
Sbjct: 231 SDKAKTGKDTHVHKREIMTETKQINIGLLPVMVKSNLCWLHKSQKGDCPFDFGGYFLIKG 290
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
EK FIA+EQR L+R+WV D PS SYLS++++++I +KLV + E ++I+ F
Sbjct: 291 TEKVFIAEEQRFLSRIWVTDHPSWDASYLSQIRREKINIKLVPSKSNESC---KVINICF 347
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
MPIWV FFALG SDK+ F+MID+ C+A + +II TIK++ E+FEGFR+ +A
Sbjct: 348 MGTIMPIWVAFFALGVSSDKEAFDMIDILDCDADIVNIISLTIKESHEEFEGFRTPGRAR 407
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D L++ +KFPP ESFD+YV +Y+FP + G RSKALFLGYMVKCLL++ G RKCDNK
Sbjct: 408 QYVDELIRKSKFPPKESFDEYVCRYMFPGVNGFRSKALFLGYMVKCLLMAYSGNRKCDNK 467
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DD RNKRL L+ +LL REL TH++ AERRMVK MQRDL+ D +LQ + RY DASIITNGL
Sbjct: 468 DDLRNKRLDLSCQLLRRELWTHIKRAERRMVKLMQRDLSNDGNLQDLRRYVDASIITNGL 527
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPYKK ER SG+VATLRRTNPLQM+SD+RKTRQ YAG AGDARYPNPS
Sbjct: 528 NRAFSTGSWRHPYKK-ERCSGVVATLRRTNPLQMMSDVRKTRQWFAYAGTAGDARYPNPS 586
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
YWGKLCFLSTPD E CG VKNLAVTAVVSS V +P +D + CGMKKLD++SL+ +
Sbjct: 587 YWGKLCFLSTPDAEKCGFVKNLAVTAVVSSVVRKPLIDTFVSCGMKKLDDISLQDISGKD 646
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
++FLNG +GVC+D + RLR +RR K IDPQVEIK DKH KEVR+F+D GRI+RPLL
Sbjct: 647 RIFLNGSLLGVCADPHELTLRLRSLRRSKLIDPQVEIKRDKHHKEVRVFSDPGRIMRPLL 706
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAANEG---SSLK 1623
+V+NL++I K G SF L+ ED Q A+GI+ F++ E SS
Sbjct: 707 VVENLRRITRPKDGLYSFQELIDQNIVELIGVEEEEDIQCAYGIRHLFSSREKEDWSSSG 766
Query: 1622 YSHCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQL 1443
Y+HCELDPSFLLGLSCS+ PF NH+ ARRV QAEK S QAIG+S N R+DTLSHQ+
Sbjct: 767 YTHCELDPSFLLGLSCSLIPFGNHDNARRVQMQAEKISQQAIGYSPTNSQYRLDTLSHQM 826
Query: 1442 YYPQKPLFRTVVSECL--FSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVM 1269
+YPQ+PLFRTVVS L T S GRKD PEY+NGQNAIV+VNVHQGFNQEDSLVM
Sbjct: 827 FYPQRPLFRTVVSYGLGEAKTDCSSGRKDDFNTPEYFNGQNAIVSVNVHQGFNQEDSLVM 886
Query: 1268 NKSSLDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYV 1089
N++SL+RGMFRT HF+SYKA+VENK +++RLK +E ++FGK+ SK+G+VDSLD DG PYV
Sbjct: 887 NRASLERGMFRTLHFKSYKAQVENKEITRRLKHRENINFGKVQSKRGKVDSLDSDGLPYV 946
Query: 1088 GASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCL 909
GASLQSGDIVIGKV+ESGEDHS KL HTEKGMV KVVL+AND+G NFA VTLRQ RSPC+
Sbjct: 947 GASLQSGDIVIGKVTESGEDHSAKLMHTEKGMVDKVVLSANDDGVNFATVTLRQSRSPCV 1006
Query: 908 GDKFSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA 729
GDKF+SMHGQKGVVG L++QENFPFT +GIVPD+VINPH FPTRQTPGQLLEAALGKGIA
Sbjct: 1007 GDKFASMHGQKGVVGLLDSQENFPFTSQGIVPDMVINPHGFPTRQTPGQLLEAALGKGIA 1066
Query: 728 CRDSTRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLI 549
RYATPF+T +V+ IA+QLH++GF RWG E VLNG+TGE M S++FMGPTFYQRL+
Sbjct: 1067 LGGKVRYATPFTTPTVEVIAEQLHKAGFCRWGEESVLNGQTGERMKSLVFMGPTFYQRLV 1126
Query: 548 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSD 369
HMAEDKVKFRNTGPVHPLTRQPV D+KRFGGVKFGEMERDC+LAHGAAANLHERLF LSD
Sbjct: 1127 HMAEDKVKFRNTGPVHPLTRQPVEDKKRFGGVKFGEMERDCMLAHGAAANLHERLFTLSD 1186
Query: 368 FSQMHICQKCHRAANVILRPVP--GGKKIRGPYCNFCQSGENIVRINVPYGAKLLYMELF 195
FS+MHICQ C R ANVI+R GGKK+RGPYC FC+S E +VR++VPYG+KLLY ELF
Sbjct: 1187 FSRMHICQACERVANVIVRAAEGGGGKKVRGPYCLFCRSAERVVRVDVPYGSKLLYQELF 1246
Query: 194 SMGICLKFETEL 159
SMGICLKFETE+
Sbjct: 1247 SMGICLKFETEV 1258
>ref|XP_002445131.1| hypothetical protein SORBIDRAFT_07g004600 [Sorghum bicolor]
gi|241941481|gb|EES14626.1| hypothetical protein
SORBIDRAFT_07g004600 [Sorghum bicolor]
Length = 1251
Score = 1541 bits (3989), Expect = 0.0
Identities = 748/1149 (65%), Positives = 914/1149 (79%), Gaps = 4/1149 (0%)
Frame = -2
Query: 3593 MEKFCKDAARAFFKEWGLLSHQINSYDDFIEHGLQDLFDTLGDVVVEPGYDPSKKGSEGW 3414
+EKFC++A+R+FF GL+SHQINSY+ F+ HGLQDLFD+LG++ VEP YDPS K S W
Sbjct: 107 LEKFCREASRSFFSATGLVSHQINSYNQFVSHGLQDLFDSLGEITVEPDYDPSNK-SGAW 165
Query: 3413 RHAAISFGNVRLEKPEFWPESNDVHDTSLKLLPKHARLQNMTYSSQLKVEVRVQTYVQEK 3234
+HA I FG V L +P F ++ D+ LK P+HARLQ MTY+S++ VE+ Q Y+ +K
Sbjct: 166 KHATIKFGRVELSEPVFMVDNLDLEQQDLKFKPRHARLQRMTYASRMNVEMTAQVYILDK 225
Query: 3233 NDKAKSGNDLYIQKRVLGDTKREITIGRLPVMVNSNLCWLKTLDKSDCIFDSGGYFLIKG 3054
+DKAK+G D ++ +R + +++++G LPVMV SNLCWL L +SDC FD GGYFLIKG
Sbjct: 226 SDKAKTGKDTHVHRREIMTETKQVSMGLLPVMVKSNLCWLHKLQESDCQFDFGGYFLIKG 285
Query: 3053 MEKTFIAQEQRCLTRLWVVDKPSPTVSYLSEVKQKRIYVKLVEAPKVEGFNGGRLISFYF 2874
EK FIA+EQR L+R+W+ D PS SYLS++K+++I +KLV + + E ++I+ YF
Sbjct: 286 TEKVFIAEEQRFLSRIWITDYPSWDASYLSQIKREKINIKLVPSKRNESC---KVITIYF 342
Query: 2873 FFATMPIWVMFFALGALSDKDVFEMIDLEGCEAGMTDIILATIKDAEEQFEGFRSIDKAC 2694
+PIWV+FFALG SDK+ F+MID+ C+A + +II +TIK++ E+FEGFR+ +AC
Sbjct: 343 MGTIIPIWVVFFALGVSSDKEAFDMIDILDCDASIVNIISSTIKESHEEFEGFRAPGRAC 402
Query: 2693 QHIDTLVKNAKFPPTESFDQYVSKYLFPNIAGHRSKALFLGYMVKCLLLSSVGKRKCDNK 2514
Q++D L++ +KFPP ESFD+YV +Y+FP++ G RSKALFLGYMVKCLL++ G RKCDNK
Sbjct: 403 QYVDKLIRKSKFPPKESFDEYVCRYMFPSVNGVRSKALFLGYMVKCLLMAYSGNRKCDNK 462
Query: 2513 DDFRNKRLHLAGELLARELRTHVRHAERRMVKTMQRDLNGDNSLQLIERYWDASIITNGL 2334
DDFRNKRL LA +LL REL TH++ AE RMVK MQRDL+ D +LQ + RY DASIITNGL
Sbjct: 463 DDFRNKRLGLACQLLRRELWTHIKRAEWRMVKLMQRDLSNDGNLQDLRRYVDASIITNGL 522
Query: 2333 NRAFTTGAWTHPYKKAERSSGIVATLRRTNPLQMISDMRKTRQQVLYAGKAGDARYPNPS 2154
NRAF+TG+W HPY KA R SG+VATLRRTNPLQM+SD+RKTRQ V Y+G GDARYPNPS
Sbjct: 523 NRAFSTGSWRHPYLKA-RCSGVVATLRRTNPLQMMSDLRKTRQWVAYSGAVGDARYPNPS 581
Query: 2153 YWGKLCFLSTPDGENCGLVKNLAVTAVVSSKVLQPSVDNLMECGMKKLDEVSLESMRNMG 1974
+WGKLCFLSTPDGE CG VKNLAVTAVVSS V +P +D + CGMKKLD++SL+ +
Sbjct: 582 FWGKLCFLSTPDGEKCGFVKNLAVTAVVSSVVRKPLIDTFVSCGMKKLDDISLQDISGKD 641
Query: 1973 KVFLNGDWVGVCSDMSSIADRLRCMRRGKQIDPQVEIKIDKHQKEVRIFTDAGRILRPLL 1794
++FLNG +GVC+D + RLR +RR K IDPQVEIK DKH KEVR+ D GRILRPLL
Sbjct: 642 RIFLNGSLLGVCADPHELTLRLRSLRRSKLIDPQVEIKRDKHHKEVRVLCDPGRILRPLL 701
Query: 1793 IVKNLKKIRELKGGACSFSYLMXXXXXXXXXXXXXEDCQTAWGIKSFFAAN-EGSSLKYS 1617
+V+NL++I K G SF L+ ED Q A GI+ F+ E S Y+
Sbjct: 702 VVENLRRITRPKDGLYSFQELIDQNIVELIGVEEEEDIQCASGIRHLFSGEKEDRSSGYT 761
Query: 1616 HCELDPSFLLGLSCSITPFANHNFARRVLYQAEKHSHQAIGFSTVNPSIRVDTLSHQLYY 1437
HCELDPSFLLGLSCS+ PFANH+ +RVL QAEK S QAIG+S N R+DTLSHQ++Y
Sbjct: 762 HCELDPSFLLGLSCSLIPFANHDNGKRVLMQAEKISQQAIGYSPTNSHTRLDTLSHQIFY 821
Query: 1436 PQKPLFRTVVSECL--FSTSSSVGRKDTIARPEYYNGQNAIVAVNVHQGFNQEDSLVMNK 1263
PQ+PLF+TVVS L T+ S GRKD PEY+NGQNAIV++NVHQGFNQEDSLV+N+
Sbjct: 822 PQRPLFKTVVSYGLGKAETAYSFGRKDDFNTPEYFNGQNAIVSINVHQGFNQEDSLVLNR 881
Query: 1262 SSLDRGMFRTEHFRSYKAEVENKVLSKRLKLKEKVDFGKIDSKKGRVDSLDDDGFPYVGA 1083
+SL+RGMFRT H +SYKA+VENK +++RLK +E ++FGK+ SK+G+VDSLD +G PYVGA
Sbjct: 882 ASLERGMFRTLHLKSYKAQVENKEITRRLKHRESINFGKVQSKRGKVDSLDSEGLPYVGA 941
Query: 1082 SLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQKVVLAANDEGKNFAVVTLRQVRSPCLGD 903
SLQSGDIVIGKVSESGEDHS KL HTEKGMV KVVL+AND+G NFA VTLRQ RSPC+GD
Sbjct: 942 SLQSGDIVIGKVSESGEDHSAKLMHTEKGMVDKVVLSANDDGVNFATVTLRQSRSPCVGD 1001
Query: 902 KFSSMHGQKGVVGFLETQENFPFTCEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACR 723
KF+SMHGQKGVVG L++QENFPFTC+GIVPDIVINPH FPTRQTPGQLLEAALGKGIA
Sbjct: 1002 KFASMHGQKGVVGLLDSQENFPFTCQGIVPDIVINPHGFPTRQTPGQLLEAALGKGIAMG 1061
Query: 722 DSTRYATPFSTASVDDIADQLHRSGFSRWGSERVLNGRTGEMMSSMIFMGPTFYQRLIHM 543
RYATPF+T +VD I +QLH++GFSRWG E VLNG+TGE M S++FMGPTFYQRL+HM
Sbjct: 1062 GKVRYATPFTTPTVDVITEQLHKAGFSRWGEESVLNGQTGERMKSLVFMGPTFYQRLVHM 1121
Query: 542 AEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFS 363
AEDKVKFRNTGPVHP+TRQPV D+KRFGGVKFGEMERDC+LAHGAAANLHERLF LSDFS
Sbjct: 1122 AEDKVKFRNTGPVHPVTRQPVEDKKRFGGVKFGEMERDCMLAHGAAANLHERLFTLSDFS 1181
Query: 362 QMHICQKCHRAANVILRPVPGG-KKIRGPYCNFCQSGENIVRINVPYGAKLLYMELFSMG 186
QMHICQ C R ANVI+RP GG KK+ GPYC FC+S E IVR+NVPYG+KLLY ELF MG
Sbjct: 1182 QMHICQACQRVANVIMRPAEGGSKKVHGPYCMFCRSAERIVRVNVPYGSKLLYQELFCMG 1241
Query: 185 ICLKFETEL 159
ICLKF+TE+
Sbjct: 1242 ICLKFDTEI 1250