BLASTX nr result
ID: Zingiber25_contig00002123
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00002123
(534 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch... 179 3e-43
ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloropl... 178 6e-43
ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Popu... 177 1e-42
gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus pe... 177 1e-42
gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis] 176 3e-42
ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Popu... 176 3e-42
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl... 176 3e-42
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin... 176 3e-42
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl... 176 3e-42
emb|CBI33662.3| unnamed protein product [Vitis vinifera] 176 3e-42
ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloropl... 174 9e-42
ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloropl... 174 9e-42
sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, ch... 174 1e-41
ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloropl... 173 2e-41
gb|AFK46934.1| unknown [Lotus japonicus] 173 2e-41
gb|AFK41643.1| unknown [Lotus japonicus] 173 2e-41
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ... 173 2e-41
gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus... 172 4e-41
ref|XP_006437701.1| hypothetical protein CICLE_v10032902mg [Citr... 172 6e-41
ref|XP_006437700.1| hypothetical protein CICLE_v10032902mg [Citr... 171 7e-41
>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor, putative [Ricinus communis]
Length = 180
Score = 179 bits (455), Expect = 3e-43
Identities = 84/93 (90%), Positives = 88/93 (94%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
EK VAVK +EKPRLVL+FIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKT
Sbjct: 86 EKVEVAVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTT 145
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 146 LESKPWISQKKMIILLNQATDIINLWQQSGGNL 178
>ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 182
Score = 178 bits (452), Expect = 6e-43
Identities = 81/103 (78%), Positives = 90/103 (87%)
Frame = +3
Query: 51 DQFEDGEQSAEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPR 230
D + EK GV VKP+EKPRLVL+FIWMEKNIG+ALDQ+IPGHG+IPLSPY+FWPR
Sbjct: 79 DDVSPADDGTEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGSIPLSPYYFWPR 138
Query: 231 KDAWEELKTKIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
KDAWEELK +E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 139 KDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 181
>ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
gi|550329750|gb|EEF02119.2| hypothetical protein
POPTR_0010s13740g [Populus trichocarpa]
Length = 189
Score = 177 bits (450), Expect = 1e-42
Identities = 82/96 (85%), Positives = 87/96 (90%)
Frame = +3
Query: 72 QSAEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEEL 251
Q EK V VK +EKPRLVL+FIWMEKNIGLALDQVIPGHGT+PLSPYFFWPRKDAWEEL
Sbjct: 91 QETEKAEVLVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEEL 150
Query: 252 KTKIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
K +E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 151 KATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 186
>gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus persica]
Length = 192
Score = 177 bits (449), Expect = 1e-42
Identities = 81/93 (87%), Positives = 88/93 (94%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
EK GV VKPIEKPRLVL+FIWMEKNIG+ALDQ+IPGHG+IPLSPY+FWPRKDAWEELK
Sbjct: 99 EKLGVVVKPIEKPRLVLKFIWMEKNIGIALDQMIPGHGSIPLSPYYFWPRKDAWEELKVL 158
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 159 LESKPWISQKQMIILLNQATDIINLWQQSGGNL 191
>gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis]
Length = 181
Score = 176 bits (446), Expect = 3e-42
Identities = 79/96 (82%), Positives = 87/96 (90%)
Frame = +3
Query: 72 QSAEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEEL 251
+ EK GV VKP+ KPRL+L+FIWMEKNIG+ LDQVIPGHGTIPLSPY+FWPRKDAWEEL
Sbjct: 85 EDTEKLGVVVKPVAKPRLILKFIWMEKNIGIGLDQVIPGHGTIPLSPYYFWPRKDAWEEL 144
Query: 252 KTKIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
K +E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 145 KVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 180
>ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Populus trichocarpa]
gi|550332879|gb|EEE88818.2| hypothetical protein
POPTR_0008s11750g [Populus trichocarpa]
Length = 189
Score = 176 bits (446), Expect = 3e-42
Identities = 80/96 (83%), Positives = 87/96 (90%)
Frame = +3
Query: 72 QSAEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEEL 251
Q EK + VK +EKPRLVL+F+WMEKNIGLALDQVIPGHGT+PLSPYFFWPRKDAWEEL
Sbjct: 91 QETEKAELVVKRVEKPRLVLKFVWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEEL 150
Query: 252 KTKIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
K +E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 151 KATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 186
>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Cucumis
sativus]
Length = 192
Score = 176 bits (446), Expect = 3e-42
Identities = 80/93 (86%), Positives = 87/93 (93%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
EK GV VKP+EKPRLVL+FIWMEKNIG+ALDQ+IPGHGTIPLSPY+FWPRKDAWEELK
Sbjct: 99 EKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVL 158
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQ GGNL
Sbjct: 159 LESKPWISQKQMIILLNQATDIINLWQQGGGNL 191
>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
gi|255628049|gb|ACU14369.1| unknown [Glycine max]
Length = 158
Score = 176 bits (446), Expect = 3e-42
Identities = 80/93 (86%), Positives = 87/93 (93%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
EK GV VKP EKPRLVL+FIWMEKNIG+ALDQ++PGHGTIPLSPY+FWPRKDAWEELK
Sbjct: 65 EKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELKEL 124
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 125 LENKPWISQKQMIILLNQATDIINLWQQSGGNL 157
>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488272|ref|XP_003633730.1|
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
isoform 2 [Vitis vinifera]
Length = 176
Score = 176 bits (446), Expect = 3e-42
Identities = 80/93 (86%), Positives = 87/93 (93%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
EK GV VKP+EKPRLVL+FIWMEKNIG+ALDQ IPGHGTIPLSPY+FWPRKDAWEE+K
Sbjct: 83 EKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVL 142
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 143 LESKPWISQKQMIILLNQATDIINLWQQSGGNL 175
>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 176 bits (446), Expect = 3e-42
Identities = 80/93 (86%), Positives = 87/93 (93%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
EK GV VKP+EKPRLVL+FIWMEKNIG+ALDQ IPGHGTIPLSPY+FWPRKDAWEE+K
Sbjct: 82 EKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVL 141
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 142 LESKPWISQKQMIILLNQATDIINLWQQSGGNL 174
>ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
tuberosum]
Length = 176
Score = 174 bits (442), Expect = 9e-42
Identities = 79/103 (76%), Positives = 88/103 (85%)
Frame = +3
Query: 51 DQFEDGEQSAEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPR 230
D EK GV VKP+EKPRLVL+FIWMEKNIG++LDQVIPGHGTIPLSPY+FWPR
Sbjct: 73 DSISSDSHQKEKLGVVVKPLEKPRLVLKFIWMEKNIGISLDQVIPGHGTIPLSPYYFWPR 132
Query: 231 KDAWEELKTKIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
KDAWEELK +E KPWIS+K+ IILLNQATDIINLWQQSGG+L
Sbjct: 133 KDAWEELKVMLESKPWISEKQTIILLNQATDIINLWQQSGGDL 175
>ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
lycopersicum]
Length = 176
Score = 174 bits (442), Expect = 9e-42
Identities = 80/103 (77%), Positives = 88/103 (85%)
Frame = +3
Query: 51 DQFEDGEQSAEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPR 230
D EK GV VKP+EKPRLVL+FIWMEKNIG++LDQVIPGHGTIPLSPY+FWPR
Sbjct: 73 DSISSDSLQKEKLGVLVKPLEKPRLVLKFIWMEKNIGISLDQVIPGHGTIPLSPYYFWPR 132
Query: 231 KDAWEELKTKIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
KDAWEELK +E KPWISQK+ IILLNQATDIINLWQQSGG+L
Sbjct: 133 KDAWEELKVMLESKPWISQKQAIILLNQATDIINLWQQSGGDL 175
>sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 3;
Short=PSRP-3; Flags: Precursor
gi|7578871|gb|AAF64163.1|AF239218_1 plastid-specific
ribosomal protein 3 precursor [Spinacia oleracea]
Length = 179
Score = 174 bits (441), Expect = 1e-41
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +3
Query: 48 VDQFEDGEQSAEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWP 227
VD +D + EK V VKP++KPRLVL+FIWMEKNIGLALDQ IPGHGT+PLSPY+FWP
Sbjct: 74 VDIDDDLLVNKEKLKVLVKPMDKPRLVLKFIWMEKNIGLALDQTIPGHGTVPLSPYYFWP 133
Query: 228 RKDAWEELKTKIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
RKDAWEELK +E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 134 RKDAWEELKVLLENKPWISQKQMIILLNQATDIINLWQQSGGNL 177
>ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cicer
arietinum]
Length = 164
Score = 173 bits (439), Expect = 2e-41
Identities = 76/94 (80%), Positives = 88/94 (93%)
Frame = +3
Query: 78 AEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKT 257
++K GV VKP +KPRLVL+F+WMEKNIG+ALDQ++PGHGT+PLSPY+FWPRKDAWEELK
Sbjct: 70 SQKLGVVVKPTDKPRLVLKFVWMEKNIGIALDQMVPGHGTVPLSPYYFWPRKDAWEELKE 129
Query: 258 KIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 130 LLESKPWISQKQMIILLNQATDIINLWQQSGGNL 163
>gb|AFK46934.1| unknown [Lotus japonicus]
Length = 175
Score = 173 bits (439), Expect = 2e-41
Identities = 78/93 (83%), Positives = 86/93 (92%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
+K GV VKP +KPRLVL+FIWMEKNIG+ALDQ +PGHGTIPLSPY+FWPRKDAWEELK
Sbjct: 82 QKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAWEELKEL 141
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 142 LESKPWISQKQMIILLNQATDIINLWQQSGGNL 174
>gb|AFK41643.1| unknown [Lotus japonicus]
Length = 175
Score = 173 bits (439), Expect = 2e-41
Identities = 78/93 (83%), Positives = 86/93 (92%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
+K GV VKP +KPRLVL+FIWMEKNIG+ALDQ +PGHGTIPLSPY+FWPRKDAWEELK
Sbjct: 82 QKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAWEELKEL 141
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 142 LESKPWISQKQMIILLNQATDIINLWQQSGGNL 174
>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
gi|217075300|gb|ACJ86010.1| unknown [Medicago
truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
protein [Medicago truncatula]
gi|388491518|gb|AFK33825.1| unknown [Medicago
truncatula]
Length = 161
Score = 173 bits (438), Expect = 2e-41
Identities = 78/94 (82%), Positives = 87/94 (92%)
Frame = +3
Query: 78 AEKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKT 257
++K GV VKP +KPRLVL+FIWMEKNIG+ LDQ+IPGHGTIPLSPY+FWPRKDAWEELK
Sbjct: 66 SQKLGVVVKPTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWEELKE 125
Query: 258 KIEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 126 LLESKPWISQKQMIILLNQATDIINLWQQSGGNL 159
>gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus vulgaris]
Length = 164
Score = 172 bits (436), Expect = 4e-41
Identities = 79/93 (84%), Positives = 85/93 (91%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
EK GV VK EKPR+VL+FIWMEKNIG+ALDQ IPGHGTIPLSPY+FWPRKDAWEELK
Sbjct: 71 EKLGVVVKATEKPRIVLKFIWMEKNIGIALDQTIPGHGTIPLSPYYFWPRKDAWEELKEL 130
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 131 LESKPWISQKQMIILLNQATDIINLWQQSGGNL 163
>ref|XP_006437701.1| hypothetical protein CICLE_v10032902mg [Citrus clementina]
gi|568861900|ref|XP_006484437.1| PREDICTED: 30S
ribosomal protein 3-1, chloroplastic-like isoform X1
[Citrus sinensis] gi|557539897|gb|ESR50941.1|
hypothetical protein CICLE_v10032902mg [Citrus
clementina]
Length = 174
Score = 172 bits (435), Expect = 6e-41
Identities = 80/93 (86%), Positives = 86/93 (92%)
Frame = +3
Query: 81 EKQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTK 260
+K GV+VK +EKPRLVL+FIWMEKNIGLALDQ IPG+GTIPLS YFFWPRKDAWEELKT
Sbjct: 80 KKAGVSVKQLEKPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTT 139
Query: 261 IEEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
+E KPWISQK MIILLNQATDIINLWQQSGGNL
Sbjct: 140 LESKPWISQKMMIILLNQATDIINLWQQSGGNL 172
>ref|XP_006437700.1| hypothetical protein CICLE_v10032902mg [Citrus clementina]
gi|568861902|ref|XP_006484438.1| PREDICTED: 30S
ribosomal protein 3-1, chloroplastic-like isoform X2
[Citrus sinensis] gi|557539896|gb|ESR50940.1|
hypothetical protein CICLE_v10032902mg [Citrus
clementina]
Length = 173
Score = 171 bits (434), Expect = 7e-41
Identities = 80/92 (86%), Positives = 85/92 (92%)
Frame = +3
Query: 84 KQGVAVKPIEKPRLVLRFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTKI 263
K GV+VK +EKPRLVL+FIWMEKNIGLALDQ IPG+GTIPLS YFFWPRKDAWEELKT +
Sbjct: 80 KAGVSVKQLEKPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTL 139
Query: 264 EEKPWISQKRMIILLNQATDIINLWQQSGGNL 359
E KPWISQK MIILLNQATDIINLWQQSGGNL
Sbjct: 140 ESKPWISQKMMIILLNQATDIINLWQQSGGNL 171