BLASTX nr result

ID: Zingiber25_contig00002104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00002104
         (975 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW12199.1| hypothetical protein PHAVU_008G093100g [Phaseolus...    61   7e-07
ref|XP_002308136.1| predicted protein [Populus trichocarpa]            60   1e-06
ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis ...    58   5e-06
gb|EMT04680.1| 30S ribosomal protein S17 [Aegilops tauschii]           58   6e-06
dbj|BAK00955.1| predicted protein [Hordeum vulgare subsp. vulgar...    58   6e-06

>gb|ESW12199.1| hypothetical protein PHAVU_008G093100g [Phaseolus vulgaris]
           gi|561013339|gb|ESW12200.1| hypothetical protein
           PHAVU_008G093100g [Phaseolus vulgaris]
          Length = 88

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = -1

Query: 384 QVILDPSRPLSKRKNWIVAEILRKARVYVKPSP 286
           +V LDPSRPLSKRKNW+VAEIL+KAR+YV PSP
Sbjct: 54  KVRLDPSRPLSKRKNWVVAEILKKARIYVPPSP 86


>ref|XP_002308136.1| predicted protein [Populus trichocarpa]
          Length = 105

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 384 QVILDPSRPLSKRKNWIVAEILRKARVYVKPSPAAQA 274
           +V LDPSRPLSKRKNW+VAEIL+KAR+YV PS A  A
Sbjct: 54  RVRLDPSRPLSKRKNWVVAEILKKARIYVPPSAADNA 90


>ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis vinifera]
           gi|297745104|emb|CBI38943.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -1

Query: 384 QVILDPSRPLSKRKNWIVAEILRKARVYVKPSPAAQAFG 268
           +V LDPSRPLSK K+W+VAEIL+KAR+YV P P A+  G
Sbjct: 54  RVRLDPSRPLSKHKHWVVAEILKKARIYVPPEPIAKTQG 92


>gb|EMT04680.1| 30S ribosomal protein S17 [Aegilops tauschii]
          Length = 104

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = -1

Query: 384 QVILDPSRPLSKRKNWIVAEILRKARVYVKPSPAAQAFG 268
           +V LDPSRPLSK K+WIVAE+LR+A++YV P PA +A G
Sbjct: 54  RVRLDPSRPLSKNKHWIVAEVLRRAKMYVAPPPAPKASG 92


>dbj|BAK00955.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532538|dbj|BAK05198.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 104

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = -1

Query: 384 QVILDPSRPLSKRKNWIVAEILRKARVYVKPSPAAQAFG 268
           +V LDPSRPLSK K+WIVAE+LR+A++YV P PA +A G
Sbjct: 54  RVRLDPSRPLSKNKHWIVAEVLRRAKMYVPPPPAPKASG 92


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