BLASTX nr result

ID: Zingiber25_contig00002085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00002085
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG27431.1| QM-like protein [Elaeis guineensis]                     59   9e-07
ref|XP_003523292.1| PREDICTED: 60S ribosomal protein L10 [Glycin...    57   3e-06
ref|NP_001238332.1| uncharacterized protein LOC100499685 [Glycin...    57   3e-06
gb|ESW08397.1| hypothetical protein PHAVU_009G042100g [Phaseolus...    56   4e-06
gb|AFK38655.1| unknown [Lotus japonicus]                               55   7e-06
ref|XP_006344088.1| PREDICTED: 60S ribosomal protein L10-like [S...    55   1e-05
ref|NP_001275617.1| 60S ribosomal protein L10-like [Solanum tube...    55   1e-05
ref|NP_001234751.1| 60S ribosomal protein L10 [Solanum lycopersi...    55   1e-05
emb|CBI29302.3| unnamed protein product [Vitis vinifera]               55   1e-05
ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform...    55   1e-05

>gb|AAG27431.1| QM-like protein [Elaeis guineensis]
          Length = 224

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSAVAKAS 292
           VPDGVNAKLLGCHG LS RQPGRAFL   +A AS
Sbjct: 191 VPDGVNAKLLGCHGRLSARQPGRAFLPPTIANAS 224


>ref|XP_003523292.1| PREDICTED: 60S ribosomal protein L10 [Glycine max]
          Length = 223

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSAVAKA 295
           VPDGVNAKLLGCHG L+ RQPG+AFL SA A A
Sbjct: 191 VPDGVNAKLLGCHGPLANRQPGQAFLSSATATA 223


>ref|NP_001238332.1| uncharacterized protein LOC100499685 [Glycine max]
           gi|255625765|gb|ACU13227.1| unknown [Glycine max]
          Length = 223

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSAVAKA 295
           VPDGVNAKLLGCHG L+ RQPG+AFL SA A A
Sbjct: 191 VPDGVNAKLLGCHGPLANRQPGQAFLSSATATA 223


>gb|ESW08397.1| hypothetical protein PHAVU_009G042100g [Phaseolus vulgaris]
          Length = 221

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSAVA 301
           +PDGVNAKLLGCHG L+ RQPGRAFL SA A
Sbjct: 191 MPDGVNAKLLGCHGPLANRQPGRAFLSSATA 221


>gb|AFK38655.1| unknown [Lotus japonicus]
          Length = 223

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSAVAKA 295
           +PDGVNAKLLGCHG L+ RQPGRAF+ +A A A
Sbjct: 191 LPDGVNAKLLGCHGPLANRQPGRAFIDAATATA 223


>ref|XP_006344088.1| PREDICTED: 60S ribosomal protein L10-like [Solanum tuberosum]
          Length = 220

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSA 307
           VPDGVNAKLLGCHG L+ RQPGRAFL++A
Sbjct: 191 VPDGVNAKLLGCHGRLAARQPGRAFLEAA 219


>ref|NP_001275617.1| 60S ribosomal protein L10-like [Solanum tuberosum]
           gi|565354378|ref|XP_006344087.1| PREDICTED: 60S
           ribosomal protein L10-like [Solanum tuberosum]
           gi|77999313|gb|ABB17003.1| 60S ribosomal protein
           L10-like protein [Solanum tuberosum]
          Length = 220

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSA 307
           VPDGVNAKLLGCHG L+ RQPGRAFL++A
Sbjct: 191 VPDGVNAKLLGCHGRLAARQPGRAFLEAA 219


>ref|NP_001234751.1| 60S ribosomal protein L10 [Solanum lycopersicum]
           gi|68449756|gb|AAY97865.1| 60S ribosomal protein L10
           [Solanum lycopersicum]
          Length = 220

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSA 307
           VPDGVNAKLLGCHG L+ RQPGRAFL++A
Sbjct: 191 VPDGVNAKLLGCHGRLAARQPGRAFLEAA 219


>emb|CBI29302.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSAV 304
           +PDGVNAKLLGCHG L++RQPGRAFL  AV
Sbjct: 111 MPDGVNAKLLGCHGPLAQRQPGRAFLSGAV 140


>ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform 2 [Vitis vinifera]
           gi|225425354|ref|XP_002275270.1| PREDICTED: 60S
           ribosomal protein L10 isoform 1 [Vitis vinifera]
          Length = 224

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -3

Query: 393 VPDGVNAKLLGCHGTLSKRQPGRAFLQSAV 304
           +PDGVNAKLLGCHG L++RQPGRAFL  AV
Sbjct: 191 MPDGVNAKLLGCHGPLAQRQPGRAFLSGAV 220


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