BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00002084
         (1658 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]      568   e-159
gb|EOY11711.1| Chloroplast RNA binding [Theobroma cacao]              567   e-159
ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Popu...   566   e-159
ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putativ...   563   e-157
gb|EMJ08534.1| hypothetical protein PRUPE_ppa007071mg [Prunus pe...   562   e-157
ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Popu...   560   e-157
ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding pro...   560   e-157
ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding pro...   553   e-154
ref|XP_006664006.1| PREDICTED: chloroplast stem-loop binding pro...   551   e-154
ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340...   551   e-154
gb|ESW35301.1| hypothetical protein PHAVU_001G223800g [Phaseolus...   550   e-154
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr...   550   e-154
ref|XP_003554610.1| PREDICTED: chloroplast stem-loop binding pro...   550   e-154
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]     550   e-154
ref|NP_001066657.1| Os12g0420200 [Oryza sativa Japonica Group] g...   548   e-153
ref|XP_006604786.1| PREDICTED: chloroplast stem-loop binding pro...   548   e-153
gb|EXB53004.1| hypothetical protein L484_018888 [Morus notabilis]     547   e-153
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps...   545   e-152
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop...   545   e-152
emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]   545   e-152

>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 380

 Score =  568 bits (1465), Expect = e-159
 Identities = 285/364 (78%), Positives = 311/364 (85%), Gaps = 18/364 (4%)
 Frame = +3

Query: 246  LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 425
            L PSSLS+F+   L      K+RVWQ KGAL+V+A  S++ ILIMGGTRFIGVFLSR+LV
Sbjct: 17   LLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSAS-SSKNILIMGGTRFIGVFLSRLLV 75

Query: 426  KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 605
            K+GHQVTLFTRGKAPITQQLPGESDQDY+DF SKILHLKGDRKDFEFVKTSLAA+GFDVV
Sbjct: 76   KEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKDFEFVKTSLAAKGFDVV 135

Query: 606  YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX--------------- 740
            YDINGREA EV+PILDALPKLEQFIYCSSAGVYLKS                        
Sbjct: 136  YDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETE 195

Query: 741  ---DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 911
               +SRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ+TQLGHVKDLA
Sbjct: 196  SLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLA 255

Query: 912  RAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 1091
            +AF+ VLGN KAS+QV+NISG KYVTFDGLA+ACAKAAGFPEPEIVHYNPK+FDFGKKKA
Sbjct: 256  KAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKA 315

Query: 1092 FPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 1271
            FPFRDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFGRGT+RK ADF TDD+ILGKS
Sbjct: 316  FPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLILGKS 375

Query: 1272 FVLQ 1283
             VLQ
Sbjct: 376  LVLQ 379


>gb|EOY11711.1| Chloroplast RNA binding [Theobroma cacao]
          Length = 379

 Score =  567 bits (1461), Expect = e-159
 Identities = 285/365 (78%), Positives = 309/365 (84%), Gaps = 18/365 (4%)
 Frame = +3

Query: 246  LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 425
            L PSSLS+F    L     ++K VWQ KGAL VAA  S +KIL+MGGTRFIG+FLSR+LV
Sbjct: 17   LLPSSLSDFSGTKLCQFQYKRK-VWQPKGALHVAAA-STKKILVMGGTRFIGIFLSRLLV 74

Query: 426  KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 605
            K+GHQVTLFTRGKAPITQQLPGE D +Y+DFKSKILHLKGDRKDFEFVK+SL+AEGFDVV
Sbjct: 75   KEGHQVTLFTRGKAPITQQLPGEPDSEYSDFKSKILHLKGDRKDFEFVKSSLSAEGFDVV 134

Query: 606  YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXXD-------------- 743
            YDINGREADEV+PILDALP LEQ+IYCSSAGVYLKS                        
Sbjct: 135  YDINGREADEVEPILDALPNLEQYIYCSSAGVYLKSDLLPHCETDAVDPKSRHKGKLNTE 194

Query: 744  ----SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 911
                SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG+QITQLGHVKDLA
Sbjct: 195  NLLASRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGVQITQLGHVKDLA 254

Query: 912  RAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 1091
            +AF+ VLGN KASKQV+NISG KYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA
Sbjct: 255  KAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 314

Query: 1092 FPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 1271
            FPFRDQHFFASIEKA+  LGW PEF LV+GLADSYNLDFGRGT+RK ADFSTDD+ILGK+
Sbjct: 315  FPFRDQHFFASIEKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKT 374

Query: 1272 FVLQT 1286
             VLQ+
Sbjct: 375  LVLQS 379


>ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Populus trichocarpa]
            gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
            gi|550324645|gb|EEE95397.2| hypothetical protein
            POPTR_0013s00760g [Populus trichocarpa]
          Length = 380

 Score =  567 bits (1460), Expect = e-159
 Identities = 284/364 (78%), Positives = 310/364 (85%), Gaps = 18/364 (4%)
 Frame = +3

Query: 246  LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 425
            L PSSLS+F+   L      K+RVWQ KGAL+V+A  S++ ILIMGGTRFIGVFLSR+LV
Sbjct: 17   LLPSSLSDFNGTRLHSQVRCKRRVWQTKGALQVSAS-SSKNILIMGGTRFIGVFLSRLLV 75

Query: 426  KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 605
            K+GHQVTLFTRGKAPITQ LPGESDQDYADF SKILHLKGDRKDFEFVKTSLAA+GFDVV
Sbjct: 76   KEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVV 135

Query: 606  YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX--------------- 740
            YDINGREA EV+PILDALPKLEQFIYCSSAGVYLKS                        
Sbjct: 136  YDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETE 195

Query: 741  ---DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 911
               +SRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ+TQLGHVKDLA
Sbjct: 196  SLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLA 255

Query: 912  RAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 1091
            +AF+ VLGN KAS+QV+NISG KYVTFDGLA+ACAKAAGFPEPEIVHYNPK+FDFGKKKA
Sbjct: 256  KAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKA 315

Query: 1092 FPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 1271
            FPFRDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFGRGT+RK ADF TDD+I+GKS
Sbjct: 316  FPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLIIGKS 375

Query: 1272 FVLQ 1283
             VLQ
Sbjct: 376  LVLQ 379


>ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223548502|gb|EEF49993.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 381

 Score =  563 bits (1450), Expect = e-157
 Identities = 282/374 (75%), Positives = 310/374 (82%), Gaps = 18/374 (4%)
 Frame = +3

Query: 219  KQASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFI 398
            +Q  P  + L  S  S+F+   L      K+RVWQ KGAL+V A  S++ ILIMGGTRFI
Sbjct: 9    QQTQPSFSLLTSSLSSDFNGTRLHTQIQCKRRVWQAKGALQVTAS-SSKNILIMGGTRFI 67

Query: 399  GVFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTS 578
            GVFLSR+LVK+GHQVTLFTRGKAPITQ+LPGESDQDYADF SK+LHLKGDRKDF+FVK+S
Sbjct: 68   GVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKDFDFVKSS 127

Query: 579  LAAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------ 740
            L+A+GFDVVYDINGREADEV PILDALP LEQFIYCSSAGVYLKS               
Sbjct: 128  LSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKS 187

Query: 741  ------------DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQIT 884
                        +S GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQIT
Sbjct: 188  RHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQIT 247

Query: 885  QLGHVKDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPK 1064
            QLGHVKDLA+AF+ VLGN KASKQV+NISG KYVTFDGLARACAKA GFPEPEIVHYNPK
Sbjct: 248  QLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPK 307

Query: 1065 EFDFGKKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFS 1244
            EFDFGKKKAFPFRDQHFFAS++KA+  LGW PEF LV+GLADSYNLDFGRGTFRK ADF+
Sbjct: 308  EFDFGKKKAFPFRDQHFFASVDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTFRKEADFT 367

Query: 1245 TDDIILGKSFVLQT 1286
            TDD+ILGKS VLQ+
Sbjct: 368  TDDMILGKSLVLQS 381


>gb|EMJ08534.1| hypothetical protein PRUPE_ppa007071mg [Prunus persica]
          Length = 383

 Score =  562 bits (1448), Expect = e-157
 Identities = 285/377 (75%), Positives = 316/377 (83%), Gaps = 19/377 (5%)
 Frame = +3

Query: 213  QPKQASPWATPLAPSSLSEFHAAALDLSNIR-KKRVWQKKGALRVAAGLSARKILIMGGT 389
            QP+Q  P  + L PSSLS+F+   L  S ++ K+RV Q K AL+V A  SA+KILIMGGT
Sbjct: 8    QPQQRHPSFSLLPPSSLSDFNGTRLLHSQLQCKRRVSQPKVALQVTAS-SAKKILIMGGT 66

Query: 390  RFIGVFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFV 569
            RFIG+FLSR+LVK+GHQVTLFTRGKAPITQQLPGESD+DY DF SKILHLKGDRKD+EFV
Sbjct: 67   RFIGLFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDKDYTDFASKILHLKGDRKDYEFV 126

Query: 570  KTSLAAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX--- 740
            K+SL+AEGFDVVYDINGREA+EV PIL+ LPKLEQ+IYCSSAGVYLKS            
Sbjct: 127  KSSLSAEGFDVVYDINGREAEEVVPILEGLPKLEQYIYCSSAGVYLKSDQLPHFETDTVD 186

Query: 741  ---------------DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 875
                           +S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGI
Sbjct: 187  PKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGI 246

Query: 876  QITQLGHVKDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHY 1055
            QITQLGHVKDLA AF+ VLGN KASK+V+NISG KYVTFDGLA+ACAKA GFPEPEIVHY
Sbjct: 247  QITQLGHVKDLATAFIKVLGNEKASKEVFNISGEKYVTFDGLAKACAKAGGFPEPEIVHY 306

Query: 1056 NPKEFDFGKKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAA 1235
            NPKEFDFGKKKAFPFRDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFGRGTFRK A
Sbjct: 307  NPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEA 366

Query: 1236 DFSTDDIILGKSFVLQT 1286
            DFSTDDIILGKS VLQ+
Sbjct: 367  DFSTDDIILGKSLVLQS 383


>ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Populus trichocarpa]
            gi|550337715|gb|ERP60153.1| hypothetical protein
            POPTR_0005s01370g [Populus trichocarpa]
          Length = 380

 Score =  560 bits (1444), Expect = e-157
 Identities = 282/361 (78%), Positives = 306/361 (84%), Gaps = 18/361 (4%)
 Frame = +3

Query: 255  SSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILVKDG 434
            SSLS+F+   L      K+R WQ K AL+V+A  S++ ILIMGGTRFIGVFLSR+LVK+G
Sbjct: 20   SSLSDFNGTRLHSQVQCKRRAWQTKRALQVSAS-SSKNILIMGGTRFIGVFLSRLLVKEG 78

Query: 435  HQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVVYDI 614
            HQVTLFTRGKAPITQQLPGESDQDYADF SK+LHLKGDRKDFEFVKTSLAA+GFDV+YDI
Sbjct: 79   HQVTLFTRGKAPITQQLPGESDQDYADFSSKVLHLKGDRKDFEFVKTSLAAKGFDVIYDI 138

Query: 615  NGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------------------ 740
            NGREA EV+PILDALPKLEQFIYCSSAGVYLKS                           
Sbjct: 139  NGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLL 198

Query: 741  DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 920
            +S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA+AF
Sbjct: 199  ESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAF 258

Query: 921  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 1100
            V VLGN KAS+QV+NISG KYVTFDGLARACAKAAGFPEP IVHYNPKEFDFGKKKAFPF
Sbjct: 259  VEVLGNDKASQQVFNISGEKYVTFDGLARACAKAAGFPEPVIVHYNPKEFDFGKKKAFPF 318

Query: 1101 RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 1280
            RDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFG GT+RK ADFSTDD+ILGKS VL
Sbjct: 319  RDQHFFASIDKARHVLGWEPEFDLVEGLADSYNLDFGTGTYRKEADFSTDDLILGKSLVL 378

Query: 1281 Q 1283
            Q
Sbjct: 379  Q 379


>ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 380

 Score =  560 bits (1442), Expect = e-157
 Identities = 283/374 (75%), Positives = 315/374 (84%), Gaps = 19/374 (5%)
 Frame = +3

Query: 222  QASPWATPLAPSSLSEFHAAALDLSNIR-KKRVWQKKGALRVAAGLSARKILIMGGTRFI 398
            Q  P  + L PSSLS+F+   L  S+++ K+RV Q +GAL+V+A  SA+KILIMGGTRFI
Sbjct: 8    QRHPSVSLLPPSSLSDFNGTRLLHSHLQFKRRVSQPRGALQVSAS-SAKKILIMGGTRFI 66

Query: 399  GVFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTS 578
            G+FLSR+LVK+GHQVTLFTRGKAPITQQLPGESD DY DF SKILHLKGDRKDF+FVK+S
Sbjct: 67   GIFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDSDYTDFASKILHLKGDRKDFDFVKSS 126

Query: 579  LAAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------ 740
            L+AEGFDVVYDINGREA+E+ PILD LPKLEQ+IYCSSAGVYLKS               
Sbjct: 127  LSAEGFDVVYDINGREAEEIVPILDGLPKLEQYIYCSSAGVYLKSDQLPHFEIDAVDPKS 186

Query: 741  ------------DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQIT 884
                        +SRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQIT
Sbjct: 187  RHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQIT 246

Query: 885  QLGHVKDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPK 1064
            QLGHVKDLA AFV VL N KASK+V+NISG KYVTFDGLA+ACAKAAGFPEPEIVHYNPK
Sbjct: 247  QLGHVKDLATAFVKVLCNEKASKEVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPK 306

Query: 1065 EFDFGKKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFS 1244
            EFDFGKKKAFPFRDQHFFASI+KA+  LGW PE+ LV+GLADSYNLDFGRGTFRK ADFS
Sbjct: 307  EFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEYDLVEGLADSYNLDFGRGTFRKEADFS 366

Query: 1245 TDDIILGKSFVLQT 1286
            TDD+ILGKS VLQ+
Sbjct: 367  TDDMILGKSLVLQS 380


>ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Cucumis sativus]
            gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast
            stem-loop binding protein of 41 kDa b, chloroplastic-like
            [Cucumis sativus]
          Length = 383

 Score =  553 bits (1424), Expect = e-154
 Identities = 278/362 (76%), Positives = 302/362 (83%), Gaps = 18/362 (4%)
 Frame = +3

Query: 252  PSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILVKD 431
            PSSLS+F+ A L      K++V Q KG L V A  + + ILIMGGTRFIG+FLSR+LVK+
Sbjct: 22   PSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTAS-AKKNILIMGGTRFIGIFLSRLLVKE 80

Query: 432  GHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVVYD 611
            GHQVTLFTRGKAP+TQQLPGES+ DYADFKSKILHLKGDRKDF+FVK+SL+A GFDVVYD
Sbjct: 81   GHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYD 140

Query: 612  INGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXXD---------------- 743
            INGREADEV+PI+DALPKLEQFIYCSSAGVYLKS                          
Sbjct: 141  INGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESL 200

Query: 744  --SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARA 917
              S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA A
Sbjct: 201  LASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANA 260

Query: 918  FVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFP 1097
            FV VLGN KAS+QV+NISG KYV+FDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKK FP
Sbjct: 261  FVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFP 320

Query: 1098 FRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFV 1277
            FRDQHFFASIEKA+  LGW PEF LV+GLADSYNLDFGRGTFRK ADFSTDDIILGKS V
Sbjct: 321  FRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLV 380

Query: 1278 LQ 1283
            LQ
Sbjct: 381  LQ 382


>ref|XP_006664006.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Oryza brachyantha]
          Length = 376

 Score =  551 bits (1421), Expect = e-154
 Identities = 273/370 (73%), Positives = 309/370 (83%), Gaps = 19/370 (5%)
 Frame = +3

Query: 225  ASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGA-LRVAAGLSARKILIMGGTRFIG 401
            AS  ++ L PS +S+F  AAL +S+  ++R WQ +GA ++VAA   ++ IL+MGGTRFIG
Sbjct: 5    ASLKSSLLLPSPISDFSGAALSISSQTRRRSWQPRGARMQVAAAADSKNILVMGGTRFIG 64

Query: 402  VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 581
            VFLSR+LVK+GHQVTLFTRGKAPITQQLPGESD +YA+F SK+LHLKGDR+DF+FVKTSL
Sbjct: 65   VFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDAEYAEFSSKVLHLKGDRQDFDFVKTSL 124

Query: 582  AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------- 740
            AA+GFDVVYDINGREA EV PILDALP LEQ+IYCSSAGVYLKS                
Sbjct: 125  AAKGFDVVYDINGREAVEVAPILDALPNLEQYIYCSSAGVYLKSDLLPHFEVDAVDPKSR 184

Query: 741  -----------DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQ 887
                       +SR VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P +G QITQ
Sbjct: 185  HKGKLETESLLESRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQ 244

Query: 888  LGHVKDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKE 1067
            LGHVKDLA AFV  LGNPKAS+QV+NISG+KYVTFDGLARACAKA GFPEPEIVHYNPK+
Sbjct: 245  LGHVKDLATAFVLSLGNPKASRQVFNISGAKYVTFDGLARACAKAGGFPEPEIVHYNPKD 304

Query: 1068 FDFGKKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFST 1247
            FDFGKKKAFPFRDQHFFASIEKA +ELGWTPE+ LV+GLADSYNLDFGRGTFRK ADF+T
Sbjct: 305  FDFGKKKAFPFRDQHFFASIEKASKELGWTPEYDLVEGLADSYNLDFGRGTFRKEADFTT 364

Query: 1248 DDIILGKSFV 1277
            DD+ILGK  V
Sbjct: 365  DDMILGKKLV 374


>ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
            vinifera] gi|147773479|emb|CAN73432.1| hypothetical
            protein VITISV_032681 [Vitis vinifera]
            gi|296089806|emb|CBI39625.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  551 bits (1419), Expect = e-154
 Identities = 279/363 (76%), Positives = 302/363 (83%), Gaps = 18/363 (4%)
 Frame = +3

Query: 246  LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 425
            L PSSLS+F+   L      +++V Q KGAL V A    +KIL+MGGTRFIGVFL+R+LV
Sbjct: 16   LLPSSLSDFNGIRLTNHIQCRRKVCQPKGALHVTAS-GEKKILMMGGTRFIGVFLARLLV 74

Query: 426  KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 605
            K+GHQVTLFTRGKA ITQQLPGESD+DYA+F SK+LHLKGDRKDFEFVKTSLAAEGFDVV
Sbjct: 75   KEGHQVTLFTRGKAAITQQLPGESDKDYAEFSSKVLHLKGDRKDFEFVKTSLAAEGFDVV 134

Query: 606  YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX--------------- 740
            YDINGREA E++PILDALP L+Q+IYCSSAGVY KS                        
Sbjct: 135  YDINGREAVEIEPILDALPNLQQYIYCSSAGVYKKSDLLPHCETDAVDPKSRHKGKLETE 194

Query: 741  ---DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 911
               DSRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA
Sbjct: 195  SLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 254

Query: 912  RAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 1091
            +AF+ VL N KASKQV+NISG KYVTFDGLARACAK AGFPEPEIVHYNPKEFDFGKKKA
Sbjct: 255  KAFLLVLSNEKASKQVFNISGEKYVTFDGLARACAKGAGFPEPEIVHYNPKEFDFGKKKA 314

Query: 1092 FPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 1271
            FPFRDQHFFASIEKA+  LGW PEF LV+GLADSYNLDFGRGTFRK ADFSTDDIILGKS
Sbjct: 315  FPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKS 374

Query: 1272 FVL 1280
             VL
Sbjct: 375  LVL 377


>gb|ESW35301.1| hypothetical protein PHAVU_001G223800g [Phaseolus vulgaris]
          Length = 378

 Score =  550 bits (1418), Expect = e-154
 Identities = 277/364 (76%), Positives = 303/364 (83%), Gaps = 18/364 (4%)
 Frame = +3

Query: 240  TPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRI 419
            +PLA SSLS+F    L      K+++WQ KG+  V+A  S +KILIMGGTRFIGVFLSR+
Sbjct: 15   SPLA-SSLSDFSGTRLPTQLQLKRKLWQPKGSFYVSAS-STKKILIMGGTRFIGVFLSRL 72

Query: 420  LVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFD 599
            LVK+GHQVTLFTRGK P+TQQLPGESD DYADF SKILHLKGDRKDFEFVK+SL+AEGF+
Sbjct: 73   LVKEGHQVTLFTRGKTPVTQQLPGESDSDYADFSSKILHLKGDRKDFEFVKSSLSAEGFE 132

Query: 600  VVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------------- 740
            VVYDINGREADEV+PILDALP LEQFIYCSSAGVYLKS                      
Sbjct: 133  VVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLE 192

Query: 741  -----DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKD 905
                  S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+SGIQITQLGHVKD
Sbjct: 193  TESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKD 252

Query: 906  LARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKK 1085
            LARAFV VLGN KASK+V+NISG KYVTFDGLA+ACAKA GFPEPE+VHYNPK+FDFGKK
Sbjct: 253  LARAFVQVLGNDKASKEVFNISGEKYVTFDGLAKACAKAGGFPEPELVHYNPKDFDFGKK 312

Query: 1086 KAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILG 1265
            K+FPFRDQHFFASIEKA+R +GW PEF LV GLADSYNLDFGRGTFRK ADFSTDDIILG
Sbjct: 313  KSFPFRDQHFFASIEKAKRLVGWEPEFDLVGGLADSYNLDFGRGTFRKEADFSTDDIILG 372

Query: 1266 KSFV 1277
            K  V
Sbjct: 373  KKLV 376


>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
            gi|557095353|gb|ESQ35935.1| hypothetical protein
            EUTSA_v10007937mg [Eutrema salsugineum]
          Length = 379

 Score =  550 bits (1417), Expect = e-154
 Identities = 274/373 (73%), Positives = 310/373 (83%), Gaps = 18/373 (4%)
 Frame = +3

Query: 222  QASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIG 401
            Q S  +  L  SSLS+F+ A L L    K++V+Q KGAL V+A  S +KILIMGGTRFIG
Sbjct: 8    QQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSAS-SEKKILIMGGTRFIG 66

Query: 402  VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 581
            VFLSR+LVK+GHQVTLFTRGK+PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL
Sbjct: 67   VFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSL 126

Query: 582  AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------- 740
            +AEGFDVVYDINGREA+EV+PI+DALPKLEQ+IYCSSAGVYLKS                
Sbjct: 127  SAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSR 186

Query: 741  -----------DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQ 887
                        S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+Q
Sbjct: 187  HKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQ 246

Query: 888  LGHVKDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKE 1067
            LGHVKDLA AF+ VLGN KAS++++NISG KYVTFDGLARACAKA GFPEPEIVHYNPKE
Sbjct: 247  LGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKE 306

Query: 1068 FDFGKKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFST 1247
            FDFGKKKAFPFRDQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+T
Sbjct: 307  FDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTT 366

Query: 1248 DDIILGKSFVLQT 1286
            DD+IL K  VLQ+
Sbjct: 367  DDMILSKKLVLQS 379


>ref|XP_003554610.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 378

 Score =  550 bits (1416), Expect = e-154
 Identities = 276/364 (75%), Positives = 304/364 (83%), Gaps = 18/364 (4%)
 Frame = +3

Query: 240  TPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRI 419
            +PLA SSL +F    L      K+++   KG+  V+A  S +KILIMGGTRFIGVFLSR+
Sbjct: 15   SPLA-SSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSAS-STKKILIMGGTRFIGVFLSRL 72

Query: 420  LVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFD 599
            LVK+GHQVTLFTRGKAP+TQQLPGESD DYADF SKILHLKGDRKDF+FVK+SL+AEGFD
Sbjct: 73   LVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKDFDFVKSSLSAEGFD 132

Query: 600  VVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------------- 740
            VVYDINGREADEV+PILDALP LEQFIYCSSAGVYLKS                      
Sbjct: 133  VVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLE 192

Query: 741  -----DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKD 905
                  +RGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+SG+QITQLGHVKD
Sbjct: 193  TESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGLQITQLGHVKD 252

Query: 906  LARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKK 1085
            LA AF+ VLGN KASK+V+NISG KYVTFDGLARACAKA GFPEPEI+HYNPK+FDFGKK
Sbjct: 253  LATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKK 312

Query: 1086 KAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILG 1265
            K+FPFRDQHFFASIEKA+R LGW PEFGLV+GLADSYNLDFGRGT+RK ADFSTDDIILG
Sbjct: 313  KSFPFRDQHFFASIEKAKRVLGWEPEFGLVEGLADSYNLDFGRGTYRKEADFSTDDIILG 372

Query: 1266 KSFV 1277
            KS V
Sbjct: 373  KSLV 376


>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score =  550 bits (1416), Expect = e-154
 Identities = 273/373 (73%), Positives = 310/373 (83%), Gaps = 18/373 (4%)
 Frame = +3

Query: 222  QASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIG 401
            Q S  +  L  SSLS+F+ A L L    K++V+Q KGAL V+A  S +KILIMGGTRFIG
Sbjct: 8    QQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSAS-SEKKILIMGGTRFIG 66

Query: 402  VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 581
            VFLSR+LVK+GHQVTLFTRGK+PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL
Sbjct: 67   VFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSL 126

Query: 582  AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------- 740
            +AEGFDVVYDINGREA+EV+PI+DALPKLEQ+IYCSSAGVYLKS                
Sbjct: 127  SAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSR 186

Query: 741  -----------DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQ 887
                        S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+Q
Sbjct: 187  HKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQ 246

Query: 888  LGHVKDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKE 1067
            LGHVKDLA AF+ VLGN KAS++++NISG KY+TFDGLARACAKA GFPEPEIVHYNPKE
Sbjct: 247  LGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIVHYNPKE 306

Query: 1068 FDFGKKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFST 1247
            FDFGKKKAFPFRDQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+T
Sbjct: 307  FDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTT 366

Query: 1248 DDIILGKSFVLQT 1286
            DD+IL K  VLQ+
Sbjct: 367  DDMILSKKLVLQS 379


>ref|NP_001066657.1| Os12g0420200 [Oryza sativa Japonica Group]
            gi|108862567|gb|ABA97622.2| RNA binding protein,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113649164|dbj|BAF29676.1| Os12g0420200 [Oryza sativa
            Japonica Group] gi|222616978|gb|EEE53110.1| hypothetical
            protein OsJ_35887 [Oryza sativa Japonica Group]
          Length = 376

 Score =  548 bits (1413), Expect = e-153
 Identities = 272/370 (73%), Positives = 307/370 (82%), Gaps = 19/370 (5%)
 Frame = +3

Query: 225  ASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGA-LRVAAGLSARKILIMGGTRFIG 401
            AS  ++ L PS +S+F +AAL +S   ++R WQ +GA ++VAA   ++ IL+MGGTRFIG
Sbjct: 5    ASLKSSLLLPSPISDFSSAALSISTQARRRSWQPRGARMQVAAAADSKNILVMGGTRFIG 64

Query: 402  VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 581
            VFLSR+LVK+GHQVTLFTRGKAPITQQLPGESD +YA+F SK+LHLKGDR+DF+FVKTSL
Sbjct: 65   VFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDAEYAEFSSKVLHLKGDRQDFDFVKTSL 124

Query: 582  AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------- 740
            AA+GFDVVYDINGREA EV PILDALP LEQ+IYCSSAGVYLKS                
Sbjct: 125  AAKGFDVVYDINGREAVEVAPILDALPNLEQYIYCSSAGVYLKSDLLPHFETDAVDPKSR 184

Query: 741  -----------DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQ 887
                       ++R VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P +G QITQ
Sbjct: 185  HKGKLETESLLETRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQ 244

Query: 888  LGHVKDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKE 1067
            LGHVKDLA AFV  LGNPKASKQV+NISG+KYVTFDGLARACAKA GFPEPEIVHYNPK+
Sbjct: 245  LGHVKDLATAFVLALGNPKASKQVFNISGAKYVTFDGLARACAKAGGFPEPEIVHYNPKD 304

Query: 1068 FDFGKKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFST 1247
            FDFGKKKAFPFRDQHFFASIEKA  ELGW PE+ LV+GL DSYNLDFGRGTFRKAADF+T
Sbjct: 305  FDFGKKKAFPFRDQHFFASIEKATLELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFTT 364

Query: 1248 DDIILGKSFV 1277
            DD+ILGK  V
Sbjct: 365  DDMILGKKLV 374


>ref|XP_006604786.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 376

 Score =  548 bits (1412), Expect = e-153
 Identities = 275/362 (75%), Positives = 303/362 (83%), Gaps = 18/362 (4%)
 Frame = +3

Query: 240  TPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRI 419
            +PLA SSL +F    L      K+++   KG+  V+A  S +KILIMGGTRFIGVFLSR+
Sbjct: 15   SPLA-SSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSAS-STKKILIMGGTRFIGVFLSRL 72

Query: 420  LVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFD 599
            LVK+GHQVTLFTRGKAP+TQQLPGESD DYADF SKILHLKGDRKDF+FVK+SL+AEGFD
Sbjct: 73   LVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKDFDFVKSSLSAEGFD 132

Query: 600  VVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX------------- 740
            VVYDINGREADEV+PILDALP LEQFIYCSSAGVYLKS                      
Sbjct: 133  VVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLE 192

Query: 741  -----DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKD 905
                  +RGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+SG+QITQLGHVKD
Sbjct: 193  TESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGLQITQLGHVKD 252

Query: 906  LARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKK 1085
            LA AF+ VLGN KASK+V+NISG KYVTFDGLARACAKA GFPEPEI+HYNPK+FDFGKK
Sbjct: 253  LATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKK 312

Query: 1086 KAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILG 1265
            K+FPFRDQHFFASIEKA+R LGW PEFGLV+GLADSYNLDFGRGT+RK ADFSTDDIILG
Sbjct: 313  KSFPFRDQHFFASIEKAKRVLGWEPEFGLVEGLADSYNLDFGRGTYRKEADFSTDDIILG 372

Query: 1266 KS 1271
            KS
Sbjct: 373  KS 374


>gb|EXB53004.1| hypothetical protein L484_018888 [Morus notabilis]
          Length = 380

 Score =  547 bits (1410), Expect = e-153
 Identities = 283/369 (76%), Positives = 303/369 (82%), Gaps = 20/369 (5%)
 Frame = +3

Query: 240  TPLA--PSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLS 413
            TPL+  PSSLS+F+   L      KKR  Q KGAL+V A  S +KILIMGGTRFIGVFLS
Sbjct: 13   TPLSLLPSSLSDFNGTKLHAQVQFKKRDSQPKGALQVTAS-STKKILIMGGTRFIGVFLS 71

Query: 414  RILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEG 593
            R+LVK+GHQVTLFTRGKAPI+QQLPGESD DY DF SKILHLKGDRKD + VK+ L+AEG
Sbjct: 72   RLLVKEGHQVTLFTRGKAPISQQLPGESDADYTDFSSKILHLKGDRKDSDVVKSGLSAEG 131

Query: 594  FDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXXDS--------- 746
            FDVVYDINGREADEV PILDALP LEQ+IYCSSAGVYLKS                    
Sbjct: 132  FDVVYDINGREADEVAPILDALPNLEQYIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGK 191

Query: 747  ---------RGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHV 899
                     RGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHV
Sbjct: 192  LETESLLALRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHV 251

Query: 900  KDLARAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFG 1079
            KDLARAFV VLGN KASKQV+NISG KYVTFDGLARACAKA GFPEPEI+HYNPKEFDFG
Sbjct: 252  KDLARAFVQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKEFDFG 311

Query: 1080 KKKAFPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDII 1259
            KKKAFPFRDQHFFAS+EKA+  LG+ PEF LV+GLADSY LDFGRGT+RK ADFSTDDII
Sbjct: 312  KKKAFPFRDQHFFASVEKAKSVLGFKPEFDLVEGLADSYILDFGRGTYRKEADFSTDDII 371

Query: 1260 LGKSFVLQT 1286
            LGKS VLQ+
Sbjct: 372  LGKSLVLQS 380


>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
            gi|482573799|gb|EOA37986.1| hypothetical protein
            CARUB_v10009455mg [Capsella rubella]
          Length = 379

 Score =  545 bits (1405), Expect = e-152
 Identities = 271/365 (74%), Positives = 305/365 (83%), Gaps = 18/365 (4%)
 Frame = +3

Query: 246  LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 425
            L  SSLS+F+ A L L    K++V Q KGAL V+A  S +KILIMGGTRFIGVFLSR+LV
Sbjct: 16   LLNSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSAS-SEKKILIMGGTRFIGVFLSRLLV 74

Query: 426  KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 605
            K+GHQVTLFTRGK PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL+AEGFDVV
Sbjct: 75   KEGHQVTLFTRGKTPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVV 134

Query: 606  YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX--------------- 740
            YDINGREA+EV+PI++ALPKLEQ+IYCSSAGVYLKS                        
Sbjct: 135  YDINGREAEEVEPIIEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETE 194

Query: 741  ---DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 911
                S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA
Sbjct: 195  SLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLA 254

Query: 912  RAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 1091
             AF+ VLGN KAS++++NISG KYVTFDGLARACAKA GFPEPEIVHYNPKEFDFGKKKA
Sbjct: 255  TAFLKVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKA 314

Query: 1092 FPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 1271
            FPFRDQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+TDD+IL K 
Sbjct: 315  FPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKK 374

Query: 1272 FVLQT 1286
             VLQ+
Sbjct: 375  LVLQS 379


>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
            gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
            Full=Chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic; Short=CSP41-b; AltName:
            Full=Heteroglycan-interacting protein 1.3; AltName:
            Full=Protein CHLOROPLAST RNA BINDING; AltName:
            Full=Protein Gb5f; Flags: Precursor
            gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
            [Arabidopsis thaliana]
            gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
            [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
            Identical to gb|Y10557 g5bf gene from Arabidopsis
            thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
            gb|T22425, gb|N64934 and gb|T46767 come from this gene
            [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
            putative RNA-binding protein [Arabidopsis thaliana]
            gi|17979099|gb|AAL47493.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
            chloroplast stem-loop binding protein [Arabidopsis
            thaliana]
          Length = 378

 Score =  545 bits (1405), Expect = e-152
 Identities = 271/364 (74%), Positives = 305/364 (83%), Gaps = 18/364 (4%)
 Frame = +3

Query: 246  LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 425
            L  SSLS+F+ A L L    K++V Q KGAL V+A  S +KILIMGGTRFIG+FLSRILV
Sbjct: 16   LLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSAS-SEKKILIMGGTRFIGLFLSRILV 74

Query: 426  KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 605
            K+GHQVTLFTRGK+PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL+AEGFDVV
Sbjct: 75   KEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVV 134

Query: 606  YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX--------------- 740
            YDINGREA+EV+PIL+ALPKLEQ+IYCSSAGVYLKS                        
Sbjct: 135  YDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETE 194

Query: 741  ---DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 911
                S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA
Sbjct: 195  SLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLA 254

Query: 912  RAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 1091
             AF+ VLGN KAS++++NISG KYVTFDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKKA
Sbjct: 255  TAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKA 314

Query: 1092 FPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 1271
            FPFRDQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+TDD+IL K 
Sbjct: 315  FPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKK 374

Query: 1272 FVLQ 1283
             VLQ
Sbjct: 375  LVLQ 378


>emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
          Length = 374

 Score =  545 bits (1405), Expect = e-152
 Identities = 271/364 (74%), Positives = 305/364 (83%), Gaps = 18/364 (4%)
 Frame = +3

Query: 246  LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 425
            L  SSLS+F+ A L L    K++V Q KGAL V+A  S +KILIMGGTRFIG+FLSRILV
Sbjct: 12   LLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSAS-SEKKILIMGGTRFIGLFLSRILV 70

Query: 426  KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 605
            K+GHQVTLFTRGK+PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL+AEGFDVV
Sbjct: 71   KEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVV 130

Query: 606  YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKSXXXXXXXXX--------------- 740
            YDINGREA+EV+PIL+ALPKLEQ+IYCSSAGVYLKS                        
Sbjct: 131  YDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETE 190

Query: 741  ---DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA 911
                S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA
Sbjct: 191  SLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLA 250

Query: 912  RAFVTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKA 1091
             AF+ VLGN KAS++++NISG KYVTFDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKKA
Sbjct: 251  TAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKA 310

Query: 1092 FPFRDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 1271
            FPFRDQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+TDD+IL K 
Sbjct: 311  FPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKK 370

Query: 1272 FVLQ 1283
             VLQ
Sbjct: 371  LVLQ 374