BLASTX nr result

ID: Zingiber25_contig00002000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00002000
         (286 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFL90816.1| NBS-LRR-like protein, partial [Panicum virgatum]        59   7e-07
gb|AFL90815.1| NBS-LRR-like protein, partial [Panicum virgatum]        59   7e-07
ref|XP_004964589.1| PREDICTED: disease resistance protein RPM1-l...    56   6e-06
gb|EMT30596.1| Disease resistance protein RPM1 [Aegilops tauschii]     56   6e-06

>gb|AFL90816.1| NBS-LRR-like protein, partial [Panicum virgatum]
          Length = 324

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/94 (37%), Positives = 49/94 (52%)
 Frame = +3

Query: 3   LRSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRD 182
           +RS + FG+  R   +      K RLLR ++LEG+  L  H                 R 
Sbjct: 116 IRSLSVFGTRFRTFYIS----DKMRLLRVLDLEGTIGLQYHHLDNIWKLLHLKYLSLRRC 171

Query: 183 SGISTLPDSIGDLQNLQFLDIRGTYIEELPNSIV 284
           SGI  LPDS+G+L+ LQ LD+R TY+  LP +I+
Sbjct: 172 SGIDLLPDSLGNLRQLQVLDVRDTYVIALPKTII 205


>gb|AFL90815.1| NBS-LRR-like protein, partial [Panicum virgatum]
          Length = 324

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/94 (37%), Positives = 49/94 (52%)
 Frame = +3

Query: 3   LRSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRD 182
           +RS + FG+  R   +      K RLLR ++LEG+  L  H                 R 
Sbjct: 116 IRSLSVFGTRFRTFYIS----DKMRLLRVLDLEGTIGLQYHHLDNIWKLLHLKHLSLRRC 171

Query: 183 SGISTLPDSIGDLQNLQFLDIRGTYIEELPNSIV 284
           SGI  LPDS+G+L+ LQ LD+R TY+  LP +I+
Sbjct: 172 SGIDLLPDSLGNLRQLQVLDVRDTYVIALPKTII 205


>ref|XP_004964589.1| PREDICTED: disease resistance protein RPM1-like isoform X1 [Setaria
            italica] gi|514760638|ref|XP_004964590.1| PREDICTED:
            disease resistance protein RPM1-like isoform X2 [Setaria
            italica]
          Length = 1210

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/93 (39%), Positives = 46/93 (49%)
 Frame = +3

Query: 3    LRSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRD 182
            LRS T FG+ G           K R LR ++LE +F +SDH                   
Sbjct: 859  LRSLTVFGNWGS-----FFISSKMRFLRVLDLEDTFGISDHDLDQICKLFHLKYLSLRGC 913

Query: 183  SGISTLPDSIGDLQNLQFLDIRGTYIEELPNSI 281
              I  LPDSIG+L+NLQ LD+ GT I ELP +I
Sbjct: 914  ENIHHLPDSIGNLRNLQTLDVSGTRISELPATI 946


>gb|EMT30596.1| Disease resistance protein RPM1 [Aegilops tauschii]
          Length = 1203

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/93 (36%), Positives = 49/93 (52%)
 Frame = +3

Query: 6    RSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRDS 185
            RS T FG        P       RLLR ++LE +  L +H                 R++
Sbjct: 807  RSLTVFGEWSSFFISP-----SMRLLRVLDLEDTTGLVEHDDLEKIGEFQHLKYLGLRNT 861

Query: 186  GISTLPDSIGDLQNLQFLDIRGTYIEELPNSIV 284
            GI+ LP+S+G LQ L+ LDIRGTYI +LP++++
Sbjct: 862  GITRLPNSLGKLQCLEVLDIRGTYIAKLPSTVI 894


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