BLASTX nr result
ID: Zingiber25_contig00002000
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber25_contig00002000 (286 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFL90816.1| NBS-LRR-like protein, partial [Panicum virgatum] 59 7e-07 gb|AFL90815.1| NBS-LRR-like protein, partial [Panicum virgatum] 59 7e-07 ref|XP_004964589.1| PREDICTED: disease resistance protein RPM1-l... 56 6e-06 gb|EMT30596.1| Disease resistance protein RPM1 [Aegilops tauschii] 56 6e-06 >gb|AFL90816.1| NBS-LRR-like protein, partial [Panicum virgatum] Length = 324 Score = 58.9 bits (141), Expect = 7e-07 Identities = 35/94 (37%), Positives = 49/94 (52%) Frame = +3 Query: 3 LRSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRD 182 +RS + FG+ R + K RLLR ++LEG+ L H R Sbjct: 116 IRSLSVFGTRFRTFYIS----DKMRLLRVLDLEGTIGLQYHHLDNIWKLLHLKYLSLRRC 171 Query: 183 SGISTLPDSIGDLQNLQFLDIRGTYIEELPNSIV 284 SGI LPDS+G+L+ LQ LD+R TY+ LP +I+ Sbjct: 172 SGIDLLPDSLGNLRQLQVLDVRDTYVIALPKTII 205 >gb|AFL90815.1| NBS-LRR-like protein, partial [Panicum virgatum] Length = 324 Score = 58.9 bits (141), Expect = 7e-07 Identities = 35/94 (37%), Positives = 49/94 (52%) Frame = +3 Query: 3 LRSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRD 182 +RS + FG+ R + K RLLR ++LEG+ L H R Sbjct: 116 IRSLSVFGTRFRTFYIS----DKMRLLRVLDLEGTIGLQYHHLDNIWKLLHLKHLSLRRC 171 Query: 183 SGISTLPDSIGDLQNLQFLDIRGTYIEELPNSIV 284 SGI LPDS+G+L+ LQ LD+R TY+ LP +I+ Sbjct: 172 SGIDLLPDSLGNLRQLQVLDVRDTYVIALPKTII 205 >ref|XP_004964589.1| PREDICTED: disease resistance protein RPM1-like isoform X1 [Setaria italica] gi|514760638|ref|XP_004964590.1| PREDICTED: disease resistance protein RPM1-like isoform X2 [Setaria italica] Length = 1210 Score = 55.8 bits (133), Expect = 6e-06 Identities = 37/93 (39%), Positives = 46/93 (49%) Frame = +3 Query: 3 LRSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRD 182 LRS T FG+ G K R LR ++LE +F +SDH Sbjct: 859 LRSLTVFGNWGS-----FFISSKMRFLRVLDLEDTFGISDHDLDQICKLFHLKYLSLRGC 913 Query: 183 SGISTLPDSIGDLQNLQFLDIRGTYIEELPNSI 281 I LPDSIG+L+NLQ LD+ GT I ELP +I Sbjct: 914 ENIHHLPDSIGNLRNLQTLDVSGTRISELPATI 946 >gb|EMT30596.1| Disease resistance protein RPM1 [Aegilops tauschii] Length = 1203 Score = 55.8 bits (133), Expect = 6e-06 Identities = 34/93 (36%), Positives = 49/93 (52%) Frame = +3 Query: 6 RSFTAFGSDGRDVPVPLKDYRKQRLLRAIELEGSFNLSDHLHPXXXXXXXXXXXXXXRDS 185 RS T FG P RLLR ++LE + L +H R++ Sbjct: 807 RSLTVFGEWSSFFISP-----SMRLLRVLDLEDTTGLVEHDDLEKIGEFQHLKYLGLRNT 861 Query: 186 GISTLPDSIGDLQNLQFLDIRGTYIEELPNSIV 284 GI+ LP+S+G LQ L+ LDIRGTYI +LP++++ Sbjct: 862 GITRLPNSLGKLQCLEVLDIRGTYIAKLPSTVI 894