BLASTX nr result
ID: Zingiber25_contig00001949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00001949
(913 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211... 291 2e-76
gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [T... 286 1e-74
emb|CBI24384.3| unnamed protein product [Vitis vinifera] 278 3e-72
ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258... 278 3e-72
gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus pe... 276 8e-72
ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Cit... 275 1e-71
ref|XP_006430420.1| hypothetical protein CICLE_v10011637mg [Citr... 274 3e-71
ref|XP_004228485.1| PREDICTED: uncharacterized protein LOC101255... 274 3e-71
ref|XP_006362738.1| PREDICTED: heterogeneous nuclear ribonucleop... 274 4e-71
ref|NP_001274776.1| heterogeneous nuclear ribonucleoprotein A2 h... 274 4e-71
ref|XP_006836153.1| hypothetical protein AMTR_s00101p00033020 [A... 273 7e-71
ref|XP_003554083.1| PREDICTED: heterogeneous nuclear ribonucleop... 272 1e-70
ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, ... 272 1e-70
ref|XP_002307930.1| RNA recognition motif-containing family prot... 271 2e-70
gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabi... 271 3e-70
gb|ESW13552.1| hypothetical protein PHAVU_008G206200g [Phaseolus... 271 3e-70
ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [... 271 3e-70
ref|XP_004289264.1| PREDICTED: uncharacterized protein LOC101308... 270 4e-70
ref|XP_003545465.1| PREDICTED: nuclear polyadenylated RNA-bindin... 270 6e-70
ref|XP_006576753.1| PREDICTED: heterogeneous nuclear ribonucleop... 270 7e-70
>ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
gi|449503048|ref|XP_004161816.1| PREDICTED:
uncharacterized protein LOC101228786 [Cucumis sativus]
Length = 500
Score = 291 bits (745), Expect = 2e-76
Identities = 152/264 (57%), Positives = 182/264 (68%), Gaps = 7/264 (2%)
Frame = -2
Query: 903 FRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGX 724
F+Q+GEIEDC AV D+ +GKSKGYGFILFK R+GAR++L+EPQKKIGNR+T+CQLAS+G
Sbjct: 187 FKQFGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALKEPQKKIGNRMTACQLASVGP 246
Query: 723 XXXXXXXV-------SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGK 565
SEYTQRKI+VSNVGA++DPQKL+ FFS++GE++EGPLGLDK++GK
Sbjct: 247 VPTTNAVAAPQVPPASEYTQRKIYVSNVGADVDPQKLLAFFSQFGEVDEGPLGLDKMTGK 306
Query: 564 PKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXX 385
PKGF LFVYK++ESAKKALEEPHKNFEGH+LHCQKAIDGPKP K +P
Sbjct: 307 PKGFCLFVYKSIESAKKALEEPHKNFEGHVLHCQKAIDGPKPGKAQHQHHTP-------- 358
Query: 384 XXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXX 205
RN NP+ GG A SG+GHLMAP+G GVG+N
Sbjct: 359 -------NAPFQRNKNPNYTGG---------------AASGSGHLMAPAGPGVGYN---- 392
Query: 204 XXXXXXAGLNPVLGQALTALLANQ 133
GLNP +GQALTALLA Q
Sbjct: 393 --QGPPQGLNPAIGQALTALLAGQ 414
Score = 69.7 bits (169), Expect = 1e-09
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = -2
Query: 690 TQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKA 511
+ RKIFV +G + + + L+ F ++GEIE+ DKVSGK KG+ ++K A+KA
Sbjct: 165 SHRKIFVHGLGWDTNAETLINVFKQFGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKA 224
Query: 510 LEEPHKNFEGHILHCQKAIDGPKP 439
L+EP K + CQ A GP P
Sbjct: 225 LKEPQKKIGNRMTACQLASVGPVP 248
>gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
gi|508787062|gb|EOY34318.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787063|gb|EOY34319.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787064|gb|EOY34320.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
Length = 500
Score = 286 bits (731), Expect = 1e-74
Identities = 154/264 (58%), Positives = 179/264 (67%), Gaps = 4/264 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
TA F +YGEIE+C AV DR +GKSKGY FILFKHR+GARR+L++PQKKIGNRITSCQLAS
Sbjct: 177 TAEFIKYGEIEECKAVTDRVSGKSKGYAFILFKHRSGARRALKQPQKKIGNRITSCQLAS 236
Query: 732 IGXXXXXXXXV---SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 562
G SEYTQRKIFVSNV AE+DP+KL+++F +YGEIEEGPLGLDK SGKP
Sbjct: 237 QGPVPAPPPSAPPVSEYTQRKIFVSNVSAEVDPEKLLEYFRQYGEIEEGPLGLDKQSGKP 296
Query: 561 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXXX 382
KGFALFVY+++ESA++ALEEPHKNFEGH+LHCQKAIDGPKPNK G+
Sbjct: 297 KGFALFVYRSIESARRALEEPHKNFEGHVLHCQKAIDGPKPNKGGYG--GSGSGGHHQYQ 354
Query: 381 XXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHL-MAPSGAGVGFNPDXX 205
P H+ G + + + GHLMAPSG + P A GFNP
Sbjct: 355 QHQQGQHQMQPHYHHAKK----GKYSTGGSDTGHLMAPSGPAAVGFNPGVAAAGFNP--- 407
Query: 204 XXXXXXAGLNPVLGQALTALLANQ 133
LNP LGQALTALLA Q
Sbjct: 408 GVAAAAPALNPALGQALTALLATQ 431
Score = 69.3 bits (168), Expect = 2e-09
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV + + + L F KYGEIEE D+VSGK KG+A ++K A++AL+
Sbjct: 160 RKIFVHGLSWDTTAETLTAEFIKYGEIEECKAVTDRVSGKSKGYAFILFKHRSGARRALK 219
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
+P K I CQ A GP P P
Sbjct: 220 QPQKKIGNRITSCQLASQGPVPAPP 244
>emb|CBI24384.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 278 bits (710), Expect = 3e-72
Identities = 151/263 (57%), Positives = 176/263 (66%), Gaps = 3/263 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F +YGEIEDC AV D+ +GKSKGY FILFKHR+GAR++L++PQKKIGNR+TSCQLAS
Sbjct: 189 TSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLAS 248
Query: 732 IGXXXXXXXXV---SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 562
G V SEYTQRKIFVSNV +E+DPQKL++FF+K+GEIEEGPLGLDK +GKP
Sbjct: 249 AGPVPAPPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKP 308
Query: 561 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXXX 382
KGFALFVYK++ES+++ALEEPHK FEGH LHCQKAIDGPKPNKP H
Sbjct: 309 KGFALFVYKSIESSRRALEEPHKIFEGHTLHCQKAIDGPKPNKPFHHHH----------- 357
Query: 381 XXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXX 202
H P SA +A G GHLMAPSG + NP
Sbjct: 358 -----------HQHQPHYPSRKDKSKYSANAA-------GPGHLMAPSGPSMTLNP---- 395
Query: 201 XXXXXAGLNPVLGQALTALLANQ 133
LNP LGQALTALLA+Q
Sbjct: 396 --GVAPALNPALGQALTALLASQ 416
Score = 72.0 bits (175), Expect = 3e-10
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F KYGEIE+ DK+SGK KG+A ++K A+KAL+
Sbjct: 172 RKIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALK 231
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
+P K + CQ A GP P P
Sbjct: 232 QPQKKIGNRMTSCQLASAGPVPAPP 256
>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
uncharacterized protein LOC100258161 isoform 2 [Vitis
vinifera] gi|147853236|emb|CAN80681.1| hypothetical
protein VITISV_037734 [Vitis vinifera]
Length = 478
Score = 278 bits (710), Expect = 3e-72
Identities = 151/263 (57%), Positives = 176/263 (66%), Gaps = 3/263 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F +YGEIEDC AV D+ +GKSKGY FILFKHR+GAR++L++PQKKIGNR+TSCQLAS
Sbjct: 174 TSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLAS 233
Query: 732 IGXXXXXXXXV---SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 562
G V SEYTQRKIFVSNV +E+DPQKL++FF+K+GEIEEGPLGLDK +GKP
Sbjct: 234 AGPVPAPPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKP 293
Query: 561 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXXX 382
KGFALFVYK++ES+++ALEEPHK FEGH LHCQKAIDGPKPNKP H
Sbjct: 294 KGFALFVYKSIESSRRALEEPHKIFEGHTLHCQKAIDGPKPNKPFHHHH----------- 342
Query: 381 XXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXX 202
H P SA +A G GHLMAPSG + NP
Sbjct: 343 -----------HQHQPHYPSRKDKSKYSANAA-------GPGHLMAPSGPSMTLNP---- 380
Query: 201 XXXXXAGLNPVLGQALTALLANQ 133
LNP LGQALTALLA+Q
Sbjct: 381 --GVAPALNPALGQALTALLASQ 401
Score = 72.0 bits (175), Expect = 3e-10
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F KYGEIE+ DK+SGK KG+A ++K A+KAL+
Sbjct: 157 RKIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALK 216
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
+P K + CQ A GP P P
Sbjct: 217 QPQKKIGNRMTSCQLASAGPVPAPP 241
>gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus persica]
Length = 498
Score = 276 bits (706), Expect = 8e-72
Identities = 150/277 (54%), Positives = 178/277 (64%), Gaps = 17/277 (6%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F++YGEIEDC AV D+ +GKSKGYGFILFK R+GAR++L++PQKKIGNR+T+CQLA+
Sbjct: 169 TSVFKEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLAA 228
Query: 732 IGXXXXXXXXV--------------SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEG 595
IG SEYTQRKI+VSNVGA+L+PQKL+ FFS++GEIEEG
Sbjct: 229 IGPGPAPSTAAAVPVAVQAAQSQTVSEYTQRKIYVSNVGADLEPQKLLMFFSRFGEIEEG 288
Query: 594 PLGLDKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNK---PGF 424
PLGLDK++G+PKGF LFVYK+ ESAK+ALEEPHKNF+GHILHCQKAIDGPKP K P
Sbjct: 289 PLGLDKMTGRPKGFCLFVYKSPESAKRALEEPHKNFDGHILHCQKAIDGPKPVKSQHPNQ 348
Query: 423 HFQSPXXXXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMA 244
H RN NP GG A +G GHLMA
Sbjct: 349 HHHK--------------SHNSKFQRNENPGYVGG---------------AAAGMGHLMA 379
Query: 243 PSGAGVGFNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
P+ G+GFN LNP LGQALTAL A Q
Sbjct: 380 PASGGIGFN----QGAAAAQALNPALGQALTALFATQ 412
Score = 71.2 bits (173), Expect = 5e-10
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + + L F +YGEIE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 152 RKIFVHGLGWDTNAETLTSVFKEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 211
Query: 504 EPHKNFEGHILHCQKAIDGPKP 439
+P K + CQ A GP P
Sbjct: 212 QPQKKIGNRMTACQLAAIGPGP 233
>ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Citrus sinensis]
Length = 474
Score = 275 bits (704), Expect = 1e-71
Identities = 156/283 (55%), Positives = 176/283 (62%), Gaps = 25/283 (8%)
Frame = -2
Query: 906 AFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIG 727
AF+QYGEIEDC AV D+ +GKSKGYGFILFK R+GAR++L+EPQKKIGNR+T+CQLASIG
Sbjct: 150 AFKQYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALKEPQKKIGNRMTACQLASIG 209
Query: 726 XXXXXXXXV------------------------SEYTQRKIFVSNVGAELDPQKLVQFFS 619
SEYTQRKIFVSNVG+EL+PQKL+ FFS
Sbjct: 210 PATTPAVASTATHQHQHQHQHQHQHQHQQHHQQSEYTQRKIFVSNVGSELEPQKLLAFFS 269
Query: 618 KYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKP 439
KYGEIEEGPLG+DK +GKPKGF LFVYKTV++AKKALEEPHKNFEGHIL+CQKAIDGPKP
Sbjct: 270 KYGEIEEGPLGIDKATGKPKGFCLFVYKTVDAAKKALEEPHKNFEGHILNCQKAIDGPKP 329
Query: 438 NKPGFH-FQSPXXXXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSG 262
K H Q+P RN GG G A +G
Sbjct: 330 GKSRHHNAQNP-----------------HFQRNEGAGYVGGAGP------------AAAG 360
Query: 261 AGHLMAPSGAGVGFNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
GHLMAPSG + LNP LGQALTALLA Q
Sbjct: 361 PGHLMAPSGPAI--------PPAAAQALNPALGQALTALLATQ 395
Score = 70.1 bits (170), Expect = 1e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L+ F +YGEIE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 131 RKIFVHGLGWDTKAETLIDAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 190
Query: 504 EPHKNFEGHILHCQKAIDGP 445
EP K + CQ A GP
Sbjct: 191 EPQKKIGNRMTACQLASIGP 210
>ref|XP_006430420.1| hypothetical protein CICLE_v10011637mg [Citrus clementina]
gi|557532477|gb|ESR43660.1| hypothetical protein
CICLE_v10011637mg [Citrus clementina]
Length = 476
Score = 274 bits (701), Expect = 3e-71
Identities = 155/283 (54%), Positives = 176/283 (62%), Gaps = 25/283 (8%)
Frame = -2
Query: 906 AFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIG 727
AF+QYGEIEDC AV D+ +GKSKGYGFILFK R+GAR++L+EPQKKIGNR+T+CQLASIG
Sbjct: 152 AFKQYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALKEPQKKIGNRMTACQLASIG 211
Query: 726 XXXXXXXXV------------------------SEYTQRKIFVSNVGAELDPQKLVQFFS 619
SEYTQRKIFVSNVG+EL+PQKL+ FFS
Sbjct: 212 PATTPAVASTATHQHQHQHQHQHQHQHQQHHQQSEYTQRKIFVSNVGSELEPQKLLAFFS 271
Query: 618 KYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKP 439
KYGEIEEGPLG+DK +GKPKGF LFVYKTV++AKKALEEPHKNFEGHIL+CQ+AIDGPKP
Sbjct: 272 KYGEIEEGPLGIDKATGKPKGFCLFVYKTVDAAKKALEEPHKNFEGHILNCQRAIDGPKP 331
Query: 438 NKPGFH-FQSPXXXXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSG 262
K H Q+P RN GG G A +G
Sbjct: 332 GKSRHHNAQNP-----------------HFQRNEGAGYVGGAGP------------AAAG 362
Query: 261 AGHLMAPSGAGVGFNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
GHLMAPSG + LNP LGQALTALLA Q
Sbjct: 363 PGHLMAPSGPAI--------PPAAAQALNPALGQALTALLATQ 397
Score = 70.1 bits (170), Expect = 1e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L+ F +YGEIE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 133 RKIFVHGLGWDTKAETLIDAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 192
Query: 504 EPHKNFEGHILHCQKAIDGP 445
EP K + CQ A GP
Sbjct: 193 EPQKKIGNRMTACQLASIGP 212
>ref|XP_004228485.1| PREDICTED: uncharacterized protein LOC101255522 isoform 1 [Solanum
lycopersicum] gi|460365189|ref|XP_004228486.1|
PREDICTED: uncharacterized protein LOC101255522 isoform
2 [Solanum lycopersicum]
Length = 488
Score = 274 bits (701), Expect = 3e-71
Identities = 156/265 (58%), Positives = 176/265 (66%), Gaps = 5/265 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F YGEIEDC AV D+ +GKSKGYGFILFKHR+GAR++L+EPQKKIG R+TSCQLAS
Sbjct: 173 TSVFGSYGEIEDCKAVADKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLAS 232
Query: 732 IGXXXXXXXXV-----SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSG 568
G SEYTQRKIFVSNV A+L+PQKL+++FSK+GE+EEGPLGLDK SG
Sbjct: 233 AGPVPAPPPSTAAAPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSG 292
Query: 567 KPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXX 388
KPKGF LFVYKTVE A+KALEEPHK FEGH LHCQKAIDGPK +K FH Q
Sbjct: 293 KPKGFCLFVYKTVEGARKALEEPHKTFEGHTLHCQKAIDGPKHSK-NFHQQQQPQSQQHY 351
Query: 387 XXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDX 208
H P+ G SSA SAGHLMAPSG A VG+NP
Sbjct: 352 PQHHHHHNQQQHYYQH-PAKKGKYSG--SSAGSAGHLMAPSGP--------APVGYNP-- 398
Query: 207 XXXXXXXAGLNPVLGQALTALLANQ 133
A + P LGQALTALLA Q
Sbjct: 399 -----AVAAVTPALGQALTALLATQ 418
Score = 69.7 bits (169), Expect = 1e-09
Identities = 36/85 (42%), Positives = 46/85 (54%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 156 RKIFVHGLGWDTTAETLTSVFGSYGEIEDCKAVADKVSGKSKGYGFILFKHRSGARKALK 215
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
EP K + CQ A GP P P
Sbjct: 216 EPQKKIGTRMTSCQLASAGPVPAPP 240
>ref|XP_006362738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform X1 [Solanum tuberosum]
gi|565394180|ref|XP_006362739.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform X2 [Solanum tuberosum]
gi|565394183|ref|XP_006362740.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform X3 [Solanum tuberosum]
Length = 490
Score = 274 bits (700), Expect = 4e-71
Identities = 152/265 (57%), Positives = 174/265 (65%), Gaps = 5/265 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F YGEIEDC AV D+ +GKSKGYGFILFKHR+GAR++L+EPQKKIG R+TSCQLAS
Sbjct: 176 TSVFATYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLAS 235
Query: 732 IGXXXXXXXXV-----SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSG 568
G SEYTQRKIFVSNV A+L+PQKL+++FSK+GE+EEGPLGLDK SG
Sbjct: 236 AGPVPAPPPTTATPPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSG 295
Query: 567 KPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXX 388
KPKGF LFVYKTVE A+KALEEPHK FEGH LHCQKAIDGPK +K Q P
Sbjct: 296 KPKGFCLFVYKTVEGARKALEEPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYP 355
Query: 387 XXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDX 208
+P+ G + A SAGHLMAPSG A VG+NP
Sbjct: 356 QHHHHNQQQHYY---QHPAKKGKYSGSSAGAGSAGHLMAPSGP--------APVGYNP-- 402
Query: 207 XXXXXXXAGLNPVLGQALTALLANQ 133
A + P LGQALTALLA Q
Sbjct: 403 -----AVAAVTPALGQALTALLATQ 422
Score = 69.7 bits (169), Expect = 1e-09
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F+ YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 159 RKIFVHGLGWDTTAETLTSVFATYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALK 218
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
EP K + CQ A GP P P
Sbjct: 219 EPQKKIGTRMTSCQLASAGPVPAPP 243
>ref|NP_001274776.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1-like [Solanum
tuberosum] gi|82621124|gb|ABB86250.1| RNA-binding
protein AKIP1-like [Solanum tuberosum]
Length = 498
Score = 274 bits (700), Expect = 4e-71
Identities = 152/265 (57%), Positives = 174/265 (65%), Gaps = 5/265 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F YGEIEDC AV D+ +GKSKGYGFILFKHR+GAR++L+EPQKKIG R+TSCQLAS
Sbjct: 176 TSVFATYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLAS 235
Query: 732 IGXXXXXXXXV-----SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSG 568
G SEYTQRKIFVSNV A+L+PQKL+++FSK+GE+EEGPLGLDK SG
Sbjct: 236 AGPVPAPPPTTATPPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSG 295
Query: 567 KPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXX 388
KPKGF LFVYKTVE A+KALEEPHK FEGH LHCQKAIDGPK +K Q P
Sbjct: 296 KPKGFCLFVYKTVEGARKALEEPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYP 355
Query: 387 XXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDX 208
+P+ G + A SAGHLMAPSG A VG+NP
Sbjct: 356 QHHHHNQQQHYY---QHPAKKGKYSGSSAGAGSAGHLMAPSGP--------APVGYNP-- 402
Query: 207 XXXXXXXAGLNPVLGQALTALLANQ 133
A + P LGQALTALLA Q
Sbjct: 403 -----AVAAVTPALGQALTALLATQ 422
Score = 69.7 bits (169), Expect = 1e-09
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F+ YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 159 RKIFVHGLGWDTTAETLTSVFATYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALK 218
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
EP K + CQ A GP P P
Sbjct: 219 EPQKKIGTRMTSCQLASAGPVPAPP 243
>ref|XP_006836153.1| hypothetical protein AMTR_s00101p00033020 [Amborella trichopoda]
gi|548838653|gb|ERM99006.1| hypothetical protein
AMTR_s00101p00033020 [Amborella trichopoda]
Length = 481
Score = 273 bits (698), Expect = 7e-71
Identities = 146/261 (55%), Positives = 178/261 (68%), Gaps = 2/261 (0%)
Frame = -2
Query: 909 AAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASI 730
+ F++YGEIEDCNAV D+ +GKSKGYGFILFKHR+GAR++L++PQK+IGNR+T+CQLAS
Sbjct: 132 STFKKYGEIEDCNAVADKHSGKSKGYGFILFKHRSGARKALKQPQKRIGNRMTACQLASA 191
Query: 729 GXXXXXXXXVSEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFA 550
G SEYT RKI+VSNV +++DPQ+L FFSKYGEIEEGPLGLDK +GKP+GF+
Sbjct: 192 GPVPQQPPV-SEYTMRKIYVSNVSSDIDPQRLYTFFSKYGEIEEGPLGLDKQTGKPRGFS 250
Query: 549 LFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXXXXXXX 370
LFVYK++ESA+KALE+PHKNFEGHILHCQKAIDGPKPNKP H
Sbjct: 251 LFVYKSLESARKALEDPHKNFEGHILHCQKAIDGPKPNKPTHH------------AGQAH 298
Query: 369 XXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGH--LMAPSGAGVGFNPDXXXXX 196
++HNP H + + + GA H LMAPS + FN
Sbjct: 299 HHPHHQNQHHNPH----YPQHHADNMQMMNQVPAHGASHGGLMAPSQGSMPFN------- 347
Query: 195 XXXAGLNPVLGQALTALLANQ 133
GLNP LGQAL ALLA+Q
Sbjct: 348 QAAGGLNPALGQALNALLASQ 368
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L+ F KYGEIE+ DK SGK KG+ ++K A+KAL+
Sbjct: 114 RKIFVHGLGWDTTAEILISTFKKYGEIEDCNAVADKHSGKSKGYGFILFKHRSGARKALK 173
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
+P K + CQ A GP P +P
Sbjct: 174 QPQKRIGNRMTACQLASAGPVPQQP 198
>ref|XP_003554083.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoformX1
[Glycine max] gi|571556680|ref|XP_006604297.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Glycine max]
gi|571556682|ref|XP_006604298.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein 1-like isoform
X3 [Glycine max]
Length = 479
Score = 272 bits (696), Expect = 1e-70
Identities = 150/270 (55%), Positives = 179/270 (66%), Gaps = 11/270 (4%)
Frame = -2
Query: 909 AAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASI 730
++FRQYGEIEDC AV D+ +GKSKGYGFILFK R GAR +L+EPQKKIGNR+T+CQLASI
Sbjct: 147 SSFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGARNALKEPQKKIGNRMTACQLASI 206
Query: 729 GXXXXXXXXV-----------SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGL 583
G SEYTQ+KI+VSNVGA+LDPQKL+ FFS++GEIEEGPLGL
Sbjct: 207 GPVSNPPQTAPPAVAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGL 266
Query: 582 DKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXX 403
DK +GKPKGF LFVY++ ESA++ALEEPHK+FEGHILHCQKAIDGPK K H
Sbjct: 267 DKATGKPKGFCLFVYRSPESARRALEEPHKDFEGHILHCQKAIDGPKAGKLQQH------ 320
Query: 402 XXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVG 223
RN G VG++ ++ G + P GHLMAP+G G+G
Sbjct: 321 -----GNVNAQAQRAQFQRN------GSVGTNAAAGYGGGAALQP---GHLMAPAGPGIG 366
Query: 222 FNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
FN A LNP + QALTALLA+Q
Sbjct: 367 FNQS---AAAAQAALNPAMAQALTALLASQ 393
Score = 69.7 bits (169), Expect = 1e-09
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + L+ F +YGEIE+ DKVSGK KG+ ++KT A+ AL+
Sbjct: 129 RKIFVHGLGWDTTAGTLISSFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGARNALK 188
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
EP K + CQ A GP N P
Sbjct: 189 EPQKKIGNRMTACQLASIGPVSNPP 213
>ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis] gi|223531017|gb|EEF32870.1| Heterogeneous
nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 462
Score = 272 bits (696), Expect = 1e-70
Identities = 152/274 (55%), Positives = 176/274 (64%), Gaps = 14/274 (5%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T AF+QYGEIEDC AV D+ +GKSKGYGFILFK R+GAR++LQEPQKKIGNR+T+CQLAS
Sbjct: 146 TNAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALQEPQKKIGNRMTACQLAS 205
Query: 732 IGXXXXXXXXVS--------------EYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEG 595
IG S +YT+RKI+VSNV A+LDP++L FFSK+GEIEEG
Sbjct: 206 IGPVPVGQAAASAVTTSHHPQHQQVSDYTRRKIYVSNVAADLDPKELTNFFSKFGEIEEG 265
Query: 594 PLGLDKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQ 415
PLGLDK++GKPKGF LFVYK+ ESAK+ALEEPHK+FEGH+LHCQKAIDGPK KP Q
Sbjct: 266 PLGLDKLTGKPKGFCLFVYKSAESAKRALEEPHKSFEGHMLHCQKAIDGPKHGKPQQQQQ 325
Query: 414 SPXXXXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSG 235
RN NP GG +A+ HLMAP A G
Sbjct: 326 Q-----------HYNAQKSHFQRNGNPGYSGG------TASGPSHLMAP-------AAGG 361
Query: 234 AGVGFNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
G+GFN LNP LGQALTALLA Q
Sbjct: 362 PGIGFN----EGAAGAPALNPALGQALTALLATQ 391
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/82 (42%), Positives = 46/82 (56%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F +YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 129 RKIFVHGLGWDTSAETLTNAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALQ 188
Query: 504 EPHKNFEGHILHCQKAIDGPKP 439
EP K + CQ A GP P
Sbjct: 189 EPQKKIGNRMTACQLASIGPVP 210
>ref|XP_002307930.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222853906|gb|EEE91453.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 474
Score = 271 bits (693), Expect = 2e-70
Identities = 153/274 (55%), Positives = 174/274 (63%), Gaps = 16/274 (5%)
Frame = -2
Query: 906 AFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIG 727
AF+ YGEIEDC AV D+ TGKSKGYGFILFK R+GAR +L+EPQKKIGNR+ +CQLAS G
Sbjct: 149 AFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRSGARNALKEPQKKIGNRMAACQLASTG 208
Query: 726 XXXXXXXXVS--------------EYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPL 589
S EYT RKI+VSNVGA LDPQKL+ FFS++GEIEEGPL
Sbjct: 209 PVPQSSAGPSGPIAAAAQTQQPVSEYTLRKIYVSNVGANLDPQKLMSFFSEFGEIEEGPL 268
Query: 588 GLDKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSP 409
GLDK +GKPKGF LFVYKTVESAKKALEEPHK+FEGHILHCQKA+DGPK K Q P
Sbjct: 269 GLDKATGKPKGFCLFVYKTVESAKKALEEPHKSFEGHILHCQKAVDGPKHAKS----QKP 324
Query: 408 XXXXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAP--SG 235
P+ H+ SH G++ + GHLMAP +G
Sbjct: 325 -------------------PQQHH----NMQSSHYQRNDGGGYVASGGRGGHLMAPAAAG 361
Query: 234 AGVGFNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
AG+GFN LNP LGQALTALLA Q
Sbjct: 362 AGIGFNQS-----AAAPALNPALGQALTALLATQ 390
Score = 67.4 bits (163), Expect = 7e-09
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + + L+ F YGEIE+ DKV+GK KG+ ++K A+ AL+
Sbjct: 130 RKIFVHGLGWDTNAEALINAFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRSGARNALK 189
Query: 504 EPHKNFEGHILHCQKAIDGPKP 439
EP K + CQ A GP P
Sbjct: 190 EPQKKIGNRMAACQLASTGPVP 211
>gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 483
Score = 271 bits (692), Expect = 3e-70
Identities = 153/265 (57%), Positives = 175/265 (66%), Gaps = 5/265 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F++YG+IEDC AV D+ +GKSKGYGFILFK R+GAR++L+EPQKKIGNR+TS QLAS
Sbjct: 173 TSVFKEYGDIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALKEPQKKIGNRMTSSQLAS 232
Query: 732 IGXXXXXXXXV-----SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSG 568
+G SEYTQRKI+VSNVGAELDPQKL FFSKYGEIEEGPLGLDK +G
Sbjct: 233 VGVVPAAASAQPQGPSSEYTQRKIYVSNVGAELDPQKLTVFFSKYGEIEEGPLGLDKATG 292
Query: 567 KPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXX 388
+PKGF LFVYKTV+ A+KAL EPHKNFEG+ILHCQKAIDGPKP K H Q
Sbjct: 293 RPKGFCLFVYKTVDGARKALAEPHKNFEGNILHCQKAIDGPKPGK-SHHNQ--------- 342
Query: 387 XXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDX 208
RN NP FGG P+ GHLMAP+G G GF
Sbjct: 343 -------HHHHNQRNKNPG-FGGAQP------------GPAVPGHLMAPAGPG-GFT--- 378
Query: 207 XXXXXXXAGLNPVLGQALTALLANQ 133
LNP LGQA+TALLA+Q
Sbjct: 379 -QGAAAAQALNPALGQAITALLASQ 402
Score = 63.5 bits (153), Expect = 1e-07
Identities = 35/92 (38%), Positives = 47/92 (51%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F +YG+IE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 156 RKIFVYGLGWDTTAETLTSVFKEYGDIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 215
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSP 409
EP K + Q A G P Q P
Sbjct: 216 EPQKKIGNRMTSSQLASVGVVPAAASAQPQGP 247
>gb|ESW13552.1| hypothetical protein PHAVU_008G206200g [Phaseolus vulgaris]
Length = 494
Score = 271 bits (692), Expect = 3e-70
Identities = 151/264 (57%), Positives = 175/264 (66%), Gaps = 4/264 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F +YGEIEDC AV D+ +GKSKGY FILFKH+ AR++L+ PQKKIGNR TSCQLAS
Sbjct: 183 TSVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHKDDARKALKNPQKKIGNRTTSCQLAS 242
Query: 732 IGXXXXXXXXV---SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 562
G SEYTQRKIFVSNV AE+DPQKL++FF ++GE+E+GPLGLDK +GKP
Sbjct: 243 AGPVPAPPPNANPVSEYTQRKIFVSNVSAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKP 302
Query: 561 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXXX 382
KGFALFVYK+VES+KKALEEPHKNFEGH L+CQKA+DGPK NK G+H Q
Sbjct: 303 KGFALFVYKSVESSKKALEEPHKNFEGHTLYCQKAVDGPKGNK-GYH-QYHHQQHSHHHH 360
Query: 381 XXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGV-GFNPDXX 205
+ S GG SH G+GHLMAPS + V GFNP
Sbjct: 361 HHHHQPHYQRKEKNKYSSGGGGPSH--------------GSGHLMAPSASAVGGFNP--- 403
Query: 204 XXXXXXAGLNPVLGQALTALLANQ 133
GLNP LGQALTALL NQ
Sbjct: 404 --GVPAQGLNPALGQALTALLTNQ 425
Score = 72.4 bits (176), Expect = 2e-10
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F KYGEIE+ DKVSGK KG+A ++K + A+KAL+
Sbjct: 166 RKIFVHGLGWDATAETLTSVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHKDDARKALK 225
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
P K CQ A GP P P
Sbjct: 226 NPQKKIGNRTTSCQLASAGPVPAPP 250
>ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
gi|355518467|gb|AET00091.1| Heterogeneous nuclear
ribonucleoprotein D0 [Medicago truncatula]
Length = 523
Score = 271 bits (692), Expect = 3e-70
Identities = 154/299 (51%), Positives = 183/299 (61%), Gaps = 9/299 (3%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T F +YGEIEDC AV D+A+GKSKGY FILFKHR G RR+L++PQK IGNR TSCQLAS
Sbjct: 182 TTTFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLAS 241
Query: 732 IGXXXXXXXXV---SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 562
G SEYTQRKIFVSNV +++DPQKL++FF ++GE+++GPLGLDK +GKP
Sbjct: 242 AGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGKP 301
Query: 561 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXXX 382
KGFALFVYKTVESAKKALEEP+K FEGH L+CQKA+DGPK G H+Q
Sbjct: 302 KGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKAVDGPKGYNKGGHYQQ---------- 351
Query: 381 XXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLM---APSGAGHLMAPSG-AGVGFNP 214
P + + GG G H + + PS GHLMAP+G A G+N
Sbjct: 352 -----QHHHQPHHSHHHHHGGGGGHYNPRKEKKYSHGGGGPSHGGHLMAPTGPAAGGYN- 405
Query: 213 DXXXXXXXXAGLNPVLGQALTALLANQXXXXXXXXXXXXXXXXGV--AGTPGALSNSSA 43
GLNP LGQAL+ALLANQ V AG P A N +A
Sbjct: 406 ----AGVPPQGLNPALGQALSALLANQGAGLGLGNLLGGLGGAPVNQAGPPAAYGNQAA 460
Score = 67.0 bits (162), Expect = 9e-09
Identities = 35/85 (41%), Positives = 46/85 (54%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L FSKYGEIE+ DK SGK KG+A ++K ++AL+
Sbjct: 165 RKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALK 224
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
+P K CQ A GP P P
Sbjct: 225 QPQKVIGNRTTSCQLASAGPVPAPP 249
>ref|XP_004289264.1| PREDICTED: uncharacterized protein LOC101308619 [Fragaria vesca
subsp. vesca]
Length = 481
Score = 270 bits (691), Expect = 4e-70
Identities = 153/272 (56%), Positives = 177/272 (65%), Gaps = 12/272 (4%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
T+ F +YGEIEDC AV D+ +GKSKGYGFILFK R+GARR+L++PQKKIGNR+T+CQLAS
Sbjct: 165 TSVFTEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARRALKQPQKKIGNRMTACQLAS 224
Query: 732 IGXXXXXXXXV-----------SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLG 586
+G SEYTQRKI+VSNVGA+LDPQKL+ FFS++GEIEEGPLG
Sbjct: 225 LGPAATPTGPGPAAVAAQSQPVSEYTQRKIYVSNVGADLDPQKLLVFFSRFGEIEEGPLG 284
Query: 585 LDKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPX 406
LDK +G+PKGF LFVYK+ ESAK+ALEEPHKNF+GHILHCQKAIDGPKP K Q
Sbjct: 285 LDKATGRPKGFCLFVYKSPESAKRALEEPHKNFDGHILHCQKAIDGPKPVKSHHGNQ--- 341
Query: 405 XXXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSG-AG 229
RN N FGG AP+G GH+MAP G AG
Sbjct: 342 ---------------HHHNRNKNSGGFGG--------------GAPAGPGHMMAPGGAAG 372
Query: 228 VGFNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
+GFN LNP LGQAL ALLA Q
Sbjct: 373 IGFN----QGAASTQALNPALGQAL-ALLATQ 399
Score = 68.6 bits (166), Expect = 3e-09
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + + L F++YGEIE+ DKVSGK KG+ ++KT A++AL+
Sbjct: 148 RKIFVHGLGWDTTAETLTSVFTEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARRALK 207
Query: 504 EPHKNFEGHILHCQKAIDGP--KPNKPG 427
+P K + CQ A GP P PG
Sbjct: 208 QPQKKIGNRMTACQLASLGPAATPTGPG 235
>ref|XP_003545465.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
isoform X1 [Glycine max]
gi|571507084|ref|XP_006595801.1| PREDICTED: nuclear
polyadenylated RNA-binding protein 4-like isoform X2
[Glycine max] gi|571507091|ref|XP_006595802.1|
PREDICTED: nuclear polyadenylated RNA-binding protein
4-like isoform X3 [Glycine max]
Length = 494
Score = 270 bits (690), Expect = 6e-70
Identities = 152/262 (58%), Positives = 179/262 (68%), Gaps = 5/262 (1%)
Frame = -2
Query: 912 TAAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLAS 733
TA F +YGEIEDC AV D+ +GKSKGY FILFKHR AR++L+ PQKKIGNR TSCQLAS
Sbjct: 187 TAVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLAS 246
Query: 732 IGXXXXXXXXV---SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 562
G V SEYTQRKIFVSNV AE+DPQKL++FF ++GE+E+GPLGLDK +GKP
Sbjct: 247 AGPVPAPPPNVTPVSEYTQRKIFVSNVNAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKP 306
Query: 561 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXXXXXXXXX 382
KGFALFVYK+VESAKKALEEPHKN+EGH L+CQKA+DGPK +K G+H Q
Sbjct: 307 KGFALFVYKSVESAKKALEEPHKNYEGHTLYCQKAVDGPKGSK-GYHHQQ---------- 355
Query: 381 XXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPS-GAGHLMAPSGAGV-GFNPDX 208
P +H+ + +S G PS G+GHLMAPSG+ V GFNP
Sbjct: 356 -------HSHPHHHHHHQPHYQRKEKNKYSSGGG--GPSHGSGHLMAPSGSAVGGFNP-- 404
Query: 207 XXXXXXXAGLNPVLGQALTALL 142
GLNP LGQALTAL+
Sbjct: 405 ---GLPAQGLNPALGQALTALI 423
Score = 70.9 bits (172), Expect = 6e-10
Identities = 37/85 (43%), Positives = 46/85 (54%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + L F KYGEIE+ DKVSGK KG+A ++K + A+KAL+
Sbjct: 170 RKIFVHGLGWDATADTLTAVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALK 229
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
P K CQ A GP P P
Sbjct: 230 HPQKKIGNRTTSCQLASAGPVPAPP 254
>ref|XP_006576753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like isoform X1 [Glycine max]
gi|571445263|ref|XP_006576754.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 homolog
1-like isoform X2 [Glycine max]
gi|571445265|ref|XP_006576755.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 homolog
1-like isoform X3 [Glycine max]
Length = 489
Score = 270 bits (689), Expect = 7e-70
Identities = 151/270 (55%), Positives = 179/270 (66%), Gaps = 11/270 (4%)
Frame = -2
Query: 909 AAFRQYGEIEDCNAVIDRATGKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASI 730
+AFRQYGEIEDC AV D+ +GKSKGYGFILFK R GA+ +L+EPQKKIGNR+T+CQLASI
Sbjct: 153 SAFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAQNALKEPQKKIGNRMTACQLASI 212
Query: 729 GXXXXXXXXV-----------SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGL 583
G SEYTQ+KI+VSNVGA+LDPQKL+ FFS++GEIEEGPLGL
Sbjct: 213 GPVSNPPPTPMAPSAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGL 272
Query: 582 DKVSGKPKGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPXX 403
DK +GKPKGF LFVY+ ESA++ALEEPHK+FEGHILHCQKAIDGPK K FQ
Sbjct: 273 DKATGKPKGFCLFVYRNPESARRALEEPHKDFEGHILHCQKAIDGPKAGK----FQQ--- 325
Query: 402 XXXXXXXXXXXXXXXXIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVG 223
RN N VG++ ++ G + GHLMAP+G G+G
Sbjct: 326 -QQQHGNVNAHAQRAQFQRNSN------VGANAAAGYGGGG--SAVQPGHLMAPAGPGIG 376
Query: 222 FNPDXXXXXXXXAGLNPVLGQALTALLANQ 133
FNP A LNP + QALTALLA+Q
Sbjct: 377 FNPS--AAAAAQAALNPAMAQALTALLASQ 404
Score = 69.3 bits (168), Expect = 2e-09
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = -2
Query: 684 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 505
RKIFV +G + L+ F +YGEIE+ DKVSGK KG+ ++KT A+ AL+
Sbjct: 135 RKIFVHGLGWDTTAGTLISAFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAQNALK 194
Query: 504 EPHKNFEGHILHCQKAIDGPKPNKP 430
EP K + CQ A GP N P
Sbjct: 195 EPQKKIGNRMTACQLASIGPVSNPP 219