BLASTX nr result
ID: Zingiber25_contig00001835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00001835
(1318 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001062409.1| Os08g0544800 [Oryza sativa Japonica Group] g... 73 2e-10
ref|XP_006659652.1| PREDICTED: transcription factor PCF2-like [O... 72 7e-10
dbj|BAA23143.1| PCF2 [Oryza sativa Japonica Group] 72 7e-10
ref|XP_004957394.1| PREDICTED: transcription factor PCF2-like [S... 69 4e-09
ref|XP_002462687.1| hypothetical protein SORBIDRAFT_02g030260 [S... 68 1e-08
ref|XP_004974085.1| PREDICTED: transcription factor PCF2-like [S... 67 2e-08
emb|CBI38834.3| unnamed protein product [Vitis vinifera] 65 5e-08
ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [V... 65 5e-08
ref|XP_003576752.1| PREDICTED: transcription factor PCF2-like [B... 64 1e-07
ref|XP_003576745.1| PREDICTED: transcription factor PCF2-like [B... 63 2e-07
tpg|DAA40579.1| TPA: hypothetical protein ZEAMMB73_544217 [Zea m... 62 5e-07
ref|NP_001131265.1| uncharacterized protein LOC100192578 [Zea ma... 62 5e-07
dbj|BAD46684.1| transcription factor -like [Oryza sativa Japonic... 61 9e-07
>ref|NP_001062409.1| Os08g0544800 [Oryza sativa Japonica Group]
gi|75135013|sp|Q6ZBH6.1|PCF2_ORYSJ RecName:
Full=Transcription factor PCF2
gi|187470917|sp|A2YXQ1.1|PCF2_ORYSI RecName:
Full=Transcription factor PCF2
gi|42408554|dbj|BAD09732.1| putative transcription
factor PCF3 [Oryza sativa Japonica Group]
gi|113624378|dbj|BAF24323.1| Os08g0544800 [Oryza sativa
Japonica Group] gi|125562414|gb|EAZ07862.1| hypothetical
protein OsI_30124 [Oryza sativa Indica Group]
gi|125604212|gb|EAZ43537.1| hypothetical protein
OsJ_28158 [Oryza sativa Japonica Group]
gi|215765787|dbj|BAG87484.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767506|dbj|BAG99734.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 373
Score = 73.2 bits (178), Expect = 2e-10
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 13/96 (13%)
Frame = +3
Query: 168 FYPV-HDPLLQGGG--AISISTGLAPI----APTGVVPMWA-----AAPVSGGGRVLPPG 311
+YPV DPLLQG G AIS+ +GLAPI AP G+VP++A + V+GG R++P
Sbjct: 197 YYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAGGNRMIPQA 256
Query: 312 -ALWMLPQPTAVSEPSGQTAQIWAFPPASQFINISG 416
A+WM+PQP + Q Q WA A Q +N +G
Sbjct: 257 TAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAG 292
>ref|XP_006659652.1| PREDICTED: transcription factor PCF2-like [Oryza brachyantha]
Length = 371
Score = 71.6 bits (174), Expect = 7e-10
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Frame = +3
Query: 168 FYPV-HDPLLQG--GGAISISTGLAPI----APTGVVPMWAAAP-----VSGGGRVLPPG 311
+YPV DPLLQG G AIS+ +GLAPI AP + P++A P V+GG R++P
Sbjct: 194 YYPVIGDPLLQGSAGAAISVQSGLAPITAAGAPPRLAPVFAVPPPGGPAVAGGNRMIPQA 253
Query: 312 -ALWMLPQPTAVSEPSGQTAQIWAFPPASQFINISG 416
A+WM+PQP + Q Q WA A Q +N +G
Sbjct: 254 TAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAG 289
>dbj|BAA23143.1| PCF2 [Oryza sativa Japonica Group]
Length = 373
Score = 71.6 bits (174), Expect = 7e-10
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 13/96 (13%)
Frame = +3
Query: 168 FYPV-HDPLLQGGG--AISISTGLAPI----APTGVVPMWA-----AAPVSGGGRVLPPG 311
+YPV DPLLQG G AIS+ +GLAPI AP G+VP++A + V+GG R++P
Sbjct: 197 YYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAGGNRMIPQA 256
Query: 312 -ALWMLPQPTAVSEPSGQTAQIWAFPPASQFINISG 416
A+WM+P+P + Q Q WA A Q +N +G
Sbjct: 257 TAVWMVPRPAGAAGAGNQPTQFWAIQSAPQLVNFAG 292
>ref|XP_004957394.1| PREDICTED: transcription factor PCF2-like [Setaria italica]
Length = 332
Score = 68.9 bits (167), Expect = 4e-09
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Frame = +3
Query: 168 FYP-VHDPLLQ--GGGAISISTGLAPIA----PTGVVPMWAA-APVSG----GGRVLPPG 311
+YP V DPLLQ GGGAISIS+GLAP + P G +P A AP G G +V+P
Sbjct: 189 YYPFVADPLLQANGGGAISISSGLAPASAPAGPAGAIPFLAIPAPAPGASGDGKQVIPTA 248
Query: 312 ALWMLPQPTAVSEPSGQTAQIWAFPPASQFINI 410
A+WM+PQ + + Q WAFP + N+
Sbjct: 249 AMWMVPQQVGAAGAANQPTHFWAFPTNPELFNV 281
>ref|XP_002462687.1| hypothetical protein SORBIDRAFT_02g030260 [Sorghum bicolor]
gi|241926064|gb|EER99208.1| hypothetical protein
SORBIDRAFT_02g030260 [Sorghum bicolor]
Length = 326
Score = 67.8 bits (164), Expect = 1e-08
Identities = 51/139 (36%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Frame = +3
Query: 168 FYPV-HDPLLQ--GGGAISISTGLAPI---APTGVVPMWAAAPVSGGG------RVLPPG 311
+YPV DPLLQ GGGAIS+S+GLAP AP G +P A S G + PP
Sbjct: 193 YYPVVADPLLQANGGGAISVSSGLAPASAPAPVGAIPFIAIPAPSPGATGERKQMIPPPA 252
Query: 312 ALWMLPQPTAVSEPSGQTAQIWAFPPASQFINISGTPPXXXXXXXXXVYHGGALAGVHVS 491
A+WM+PQ + Q WAFP +F+N VY GG L G
Sbjct: 253 AMWMVPQQAGA---ANQPTHYWAFPTNPEFLNFQ----------QQAVYDGGQLVG-DGE 298
Query: 492 SSGDFEQSAAPTEKKKQEL 548
S G P E + +E+
Sbjct: 299 SQGQQTGGYQPWEGEDEEI 317
>ref|XP_004974085.1| PREDICTED: transcription factor PCF2-like [Setaria italica]
Length = 368
Score = 66.6 bits (161), Expect = 2e-08
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 17/100 (17%)
Frame = +3
Query: 168 FYPV-HDPLLQGGG---AISISTGLAPI----APTGVVPMW----AAAPVSGGG---RVL 302
+YPV DPLLQG G AIS+ +GLAPI AP G+VP++ A +P GGG R++
Sbjct: 190 YYPVIADPLLQGTGGAAAISVPSGLAPITASGAPQGLVPVFAVPAAGSPGGGGGAGSRMI 249
Query: 303 PPG-ALWMLPQPTAVSEPSG-QTAQIWAFPPASQFINISG 416
P A+WM+PQP A + + Q Q WA A Q IN+ G
Sbjct: 250 PQATAVWMVPQPGATAGGAATQPTQFWAIQSAPQLINLGG 289
>emb|CBI38834.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 65.5 bits (158), Expect = 5e-08
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +3
Query: 174 PVHDPLLQGGGAISISTGLAPIA----PTGVVPMWAAAPVSGGGRVLPPGALWMLPQPTA 341
P + + A+S+S+GLAPIA P G+VPMWA + GA WM+P TA
Sbjct: 213 PANSEFVDVNDAVSVSSGLAPIATPLAPQGLVPMWAIPSNA-------VGAFWMVPPTTA 265
Query: 342 VSEPSGQTAQIWAFPP-ASQFINISGTP 422
++ PS Q QIW FPP A+ INIS P
Sbjct: 266 IAGPSNQ-PQIWTFPPTATPLINISARP 292
>ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
Length = 360
Score = 65.5 bits (158), Expect = 5e-08
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +3
Query: 174 PVHDPLLQGGGAISISTGLAPIA----PTGVVPMWAAAPVSGGGRVLPPGALWMLPQPTA 341
P + + A+S+S+GLAPIA P G+VPMWA + GA WM+P TA
Sbjct: 200 PANSEFVDVNDAVSVSSGLAPIATPLAPQGLVPMWAIPSNA-------VGAFWMVPPTTA 252
Query: 342 VSEPSGQTAQIWAFPP-ASQFINISGTP 422
++ PS Q QIW FPP A+ INIS P
Sbjct: 253 IAGPSNQ-PQIWTFPPTATPLINISARP 279
>ref|XP_003576752.1| PREDICTED: transcription factor PCF2-like [Brachypodium distachyon]
Length = 367
Score = 64.3 bits (155), Expect = 1e-07
Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Frame = +3
Query: 177 VHDPLLQG-----GGAISISTGLAPIAP--TGVVPMWAAAPVSG------GGRVLPPG-A 314
V DPLLQG G AIS+++GLAP++ G+VP++A P SG GG ++P A
Sbjct: 199 VADPLLQGPAGGGGAAISVASGLAPMSGHHQGLVPVFAV-PSSGSPAAAVGGHMIPQATA 257
Query: 315 LWMLPQPTAVSEPS--GQTAQIWAFPPASQFINISGTP----PXXXXXXXXXVYHGGALA 476
+WM+PQP A + Q Q WAF A Q IN++G P A +
Sbjct: 258 VWMVPQPVAGGGAAVGNQPTQFWAFQSAPQLINLAGAQGAVFPAAALNVADFHQQQQAAS 317
Query: 477 GVHVSSSGDFEQSAAPTEKKKQELQLMGLPPE 572
V +S+ F Q A E +Q+ + P E
Sbjct: 318 TVVQNSNSSFHQHLAGAESHEQQQRRAHHPEE 349
>ref|XP_003576745.1| PREDICTED: transcription factor PCF2-like [Brachypodium distachyon]
Length = 305
Score = 63.2 bits (152), Expect = 2e-07
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 10/88 (11%)
Frame = +3
Query: 183 DPLLQG--GGAISISTGLAPIAP--TGVVPMWAAAPVSG------GGRVLPPGALWMLPQ 332
DPLLQG GGAIS+S+GLA ++ G +P + A P +G G +++P A+WM+PQ
Sbjct: 156 DPLLQGSGGGAISMSSGLATVSAPAAGAIP-FIAIPATGSSAAGDGNQMVPSAAVWMVPQ 214
Query: 333 PTAVSEPSGQTAQIWAFPPASQFINISG 416
P V + Q WAF S+ +N +G
Sbjct: 215 PANVVGAANQPTHYWAFQTNSELVNFAG 242
>tpg|DAA40579.1| TPA: hypothetical protein ZEAMMB73_544217 [Zea mays]
Length = 343
Score = 62.0 bits (149), Expect = 5e-07
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Frame = +3
Query: 168 FYPV-HDPLLQ--GGGAISISTGL----APIAPTGVVPMWA-AAP----VSGGGRVLPPG 311
+YPV DP LQ GGGAIS+S+GL AP AP G +P A AAP G +++PP
Sbjct: 202 YYPVVADPRLQANGGGAISVSSGLAPASAPAAPAGAIPFIAIAAPRPSAAGDGKQMIPPA 261
Query: 312 ALWMLPQPTAVSEPSGQTAQIWAFPPASQFIN 407
A+WM+PQ Q WAF S+F++
Sbjct: 262 AMWMVPQQAGA---GNQPTHYWAFTTNSEFLS 290
>ref|NP_001131265.1| uncharacterized protein LOC100192578 [Zea mays]
gi|194691030|gb|ACF79599.1| unknown [Zea mays]
Length = 330
Score = 62.0 bits (149), Expect = 5e-07
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Frame = +3
Query: 168 FYPV-HDPLLQ--GGGAISISTGL----APIAPTGVVPMWA-AAP----VSGGGRVLPPG 311
+YPV DP LQ GGGAIS+S+GL AP AP G +P A AAP G +++PP
Sbjct: 189 YYPVVADPRLQANGGGAISVSSGLAPASAPAAPAGAIPFIAIAAPRPSAAGDGKQMIPPA 248
Query: 312 ALWMLPQPTAVSEPSGQTAQIWAFPPASQFIN 407
A+WM+PQ Q WAF S+F++
Sbjct: 249 AMWMVPQQAGA---GNQPTHYWAFTTNSEFLS 277
>dbj|BAD46684.1| transcription factor -like [Oryza sativa Japonica Group]
gi|125564411|gb|EAZ09791.1| hypothetical protein
OsI_32079 [Oryza sativa Indica Group]
gi|222630489|gb|EEE62621.1| hypothetical protein
OsJ_17424 [Oryza sativa Japonica Group]
Length = 381
Score = 61.2 bits (147), Expect = 9e-07
Identities = 48/128 (37%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Frame = +3
Query: 168 FYP-VHDPLLQ--GGGAISISTGLAPIA----PT----GVVPMWAAAPVSGGGR-VLPPG 311
+YP V DPLLQ GGG+ISIS+GLAP + PT G +P A S GG+ + P
Sbjct: 243 YYPIVADPLLQANGGGSISISSGLAPASSATPPTATGGGAIPFIAMPATSDGGKQAMSPA 302
Query: 312 ALWMLPQPTAVSEPSGQTAQIWAFPPASQFINISGTPPXXXXXXXXXVYHGGALAGVHVS 491
+WM+P A + Q Q WAF P N +G Y+ G GVH +
Sbjct: 303 TVWMVPPGGAGA--VNQPIQYWAFQPNPDHANFAGASS----------YNVGQNPGVHEA 350
Query: 492 SSGDFEQS 515
S+ D S
Sbjct: 351 SAADHAAS 358