BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00001780
         (279 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08858.1| Pentatricopeptide repeat-containing protein isofo...    84   1e-14
gb|EOY08857.1| Pentatricopeptide repeat-containing protein isofo...    84   1e-14
ref|NP_178143.1| pentatricopeptide repeat-containing protein [Ar...    84   3e-14
tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea m...    83   4e-14
ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arab...    83   4e-14
gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indi...    83   4e-14
gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japo...    83   4e-14
ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citr...    82   1e-13
ref|XP_006302032.1| hypothetical protein CARUB_v10020014mg [Caps...    82   1e-13
ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_006658402.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]          81   2e-13
ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containi...    80   3e-13
ref|XP_004493398.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_004493397.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_002303946.2| hypothetical protein POPTR_0003s19300g [Popu...    78   1e-12
ref|XP_004955817.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_006416900.1| hypothetical protein EUTSA_v10007131mg [Eutr...    77   2e-12

>gb|EOY08858.1| Pentatricopeptide repeat-containing protein isoform 2, partial
           [Theobroma cacao]
          Length = 621

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/86 (48%), Positives = 56/86 (65%)
 Frame = +3

Query: 21  KKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIAL 200
           KK   R + S +FK +   P  S+ + LDK+ EEG +  R EI++AM  LRKRR+Y  AL
Sbjct: 146 KKSSTRRIVSELFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEISVAMLNLRKRRMYGRAL 205

Query: 201 QFVEWLEASKKIELDARDYVSHLDLI 278
           Q  EWLEA+K+++   RDY S LDLI
Sbjct: 206 QLSEWLEANKQLDFTERDYASRLDLI 231


>gb|EOY08857.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
           cacao]
          Length = 623

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/86 (48%), Positives = 56/86 (65%)
 Frame = +3

Query: 21  KKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIAL 200
           KK   R + S +FK +   P  S+ + LDK+ EEG +  R EI++AM  LRKRR+Y  AL
Sbjct: 148 KKSSTRRIVSELFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEISVAMLNLRKRRMYGRAL 207

Query: 201 QFVEWLEASKKIELDARDYVSHLDLI 278
           Q  EWLEA+K+++   RDY S LDLI
Sbjct: 208 QLSEWLEANKQLDFTERDYASRLDLI 233


>ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42572199|ref|NP_974190.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|145327755|ref|NP_001077853.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75262222|sp|Q9C977.1|PP135_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g80270, mitochondrial; Flags: Precursor
           gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical
           protein; 8785-10851 [Arabidopsis thaliana]
           gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis
           thaliana] gi|20259918|gb|AAM13306.1| unknown protein
           [Arabidopsis thaliana] gi|332198258|gb|AEE36379.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332198259|gb|AEE36380.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332198260|gb|AEE36381.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/89 (49%), Positives = 56/89 (62%)
 Frame = +3

Query: 9   EGGAKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLY 188
           E    ++ +    S +FK I   P  S+  ALDK+ EEGN + R EI  AM +LR+RR+Y
Sbjct: 117 ETDVSRKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMY 176

Query: 189 SIALQFVEWLEASKKIELDARDYVSHLDL 275
             ALQ  EWLEA+KKIE+  RDY S LDL
Sbjct: 177 GRALQMSEWLEANKKIEMTERDYASRLDL 205


>tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
          Length = 703

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/75 (49%), Positives = 55/75 (73%)
 Frame = +3

Query: 54  IFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIALQFVEWLEASKK 233
           +F+I+ +T  +SLM  LD + + GN L RD++N+ +F LRK+R+Y+ AL+FVEW+E  K 
Sbjct: 250 LFQIVLDTSMSSLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERRKL 309

Query: 234 IELDARDYVSHLDLI 278
           +  + RDY SHLDLI
Sbjct: 310 LNFEERDYASHLDLI 324


>ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
           lyrata] gi|297335142|gb|EFH65560.1| hypothetical protein
           ARALYDRAFT_477224 [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +3

Query: 48  SPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIALQFVEWLEAS 227
           S +FK I   P  S+  ALDK+ EEGN + R E+  AM +LR+RR+Y  ALQ  EWLEA+
Sbjct: 131 SELFKTIVSAPGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEAN 190

Query: 228 KKIELDARDYVSHLDL 275
           KKIE++ RDY S LDL
Sbjct: 191 KKIEMNERDYSSRLDL 206


>gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
          Length = 610

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/88 (44%), Positives = 56/88 (63%)
 Frame = +3

Query: 15  GAKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSI 194
           G  K + +   S +F+I+ + P NSL   LDK+ E+GN L R++  L +F L+K+ +Y  
Sbjct: 135 GDTKLQNKTYRSYLFQIVLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRK 194

Query: 195 ALQFVEWLEASKKIELDARDYVSHLDLI 278
           ALQFVEW+E  K +  + RDY  HLDLI
Sbjct: 195 ALQFVEWMERGKLLNFEKRDYACHLDLI 222


>gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
          Length = 610

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/88 (44%), Positives = 56/88 (63%)
 Frame = +3

Query: 15  GAKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSI 194
           G  K + +   S +F+I+ + P NSL   LDK+ E+GN L R++  L +F L+K+ +Y  
Sbjct: 135 GDTKLQNKTYRSYLFQIVLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRK 194

Query: 195 ALQFVEWLEASKKIELDARDYVSHLDLI 278
           ALQFVEW+E  K +  + RDY  HLDLI
Sbjct: 195 ALQFVEWMERGKLLNFEKRDYACHLDLI 222


>ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citrus clementina]
           gi|557532608|gb|ESR43791.1| hypothetical protein
           CICLE_v10011296mg [Citrus clementina]
          Length = 623

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/91 (49%), Positives = 54/91 (59%)
 Frame = +3

Query: 6   SEGGAKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRL 185
           +E   K    +   S +FK I + P  S+   L KYAEEGN L R EI LAM  LR RR+
Sbjct: 143 TEASRKTTPSKRKFSKLFKAIMDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRM 202

Query: 186 YSIALQFVEWLEASKKIELDARDYVSHLDLI 278
           Y  ALQ  EWLE +KK++   RDY S LDLI
Sbjct: 203 YGKALQLSEWLETNKKLDFIERDYASCLDLI 233


>ref|XP_006302032.1| hypothetical protein CARUB_v10020014mg [Capsella rubella]
           gi|565488787|ref|XP_006302033.1| hypothetical protein
           CARUB_v10020014mg [Capsella rubella]
           gi|482570742|gb|EOA34930.1| hypothetical protein
           CARUB_v10020014mg [Capsella rubella]
           gi|482570743|gb|EOA34931.1| hypothetical protein
           CARUB_v10020014mg [Capsella rubella]
          Length = 598

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/76 (53%), Positives = 53/76 (69%)
 Frame = +3

Query: 48  SPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIALQFVEWLEAS 227
           S +FK I      S+  ALDK+ E+GN + R E+  AMF+LR+RR++  ALQ  EWLEA+
Sbjct: 132 SELFKTIVSAAGLSVGSALDKWVEDGNDITRVEVAKAMFQLRRRRMFGRALQMSEWLEAN 191

Query: 228 KKIELDARDYVSHLDL 275
           KKIE+D RDY S LDL
Sbjct: 192 KKIEMDERDYASRLDL 207


>ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 625

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/77 (54%), Positives = 51/77 (66%)
 Frame = +3

Query: 48  SPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIALQFVEWLEAS 227
           S +FK I E P  S+  ALDK+ +EGN L R EI+L    LR+RR++  ALQ  EWLEA 
Sbjct: 159 SALFKAILEFPGFSVHSALDKWVKEGNDLSRAEISLTKINLRRRRMFGRALQLSEWLEAH 218

Query: 228 KKIELDARDYVSHLDLI 278
           K+IE   RDY S LDLI
Sbjct: 219 KQIEFSERDYASRLDLI 235


>ref|XP_006658402.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Oryza brachyantha]
          Length = 637

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = +3

Query: 54  IFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIALQFVEWLEASKK 233
           ++K++ + P N+    LDK+ E+GN L R+E+ + +F LRK+ LY  ALQFVEW+E  K 
Sbjct: 172 LYKVVFDAPSNNFSHVLDKWIEDGNRLERNEVMMVLFHLRKQHLYRKALQFVEWMERGKL 231

Query: 234 IELDARDYVSHLDLI 278
           +  + RDY  HLDL+
Sbjct: 232 LNYEERDYACHLDLV 246


>gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
          Length = 608

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/87 (48%), Positives = 57/87 (65%)
 Frame = +3

Query: 18  AKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIA 197
           A+K   + + S + + I   P  S+  ALDK+  EG+ L RD+I+  MF LRKRR++  A
Sbjct: 132 AEKISRKWVPSELNEAIWNAPALSVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKA 191

Query: 198 LQFVEWLEASKKIELDARDYVSHLDLI 278
           LQF EWLEAS ++E +  DY SHLDLI
Sbjct: 192 LQFSEWLEASGQLEFNEADYASHLDLI 218


>ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Citrus sinensis]
          Length = 623

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 42/77 (54%), Positives = 49/77 (63%)
 Frame = +3

Query: 48  SPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIALQFVEWLEAS 227
           S +FK I + P  S    L  Y EEGN L R EI+LAM  LR RR+Y  ALQF EWLE +
Sbjct: 157 SKLFKAIMDAPDISNNSTLTTYVEEGNDLSRAEISLAMANLRTRRMYGKALQFSEWLETN 216

Query: 228 KKIELDARDYVSHLDLI 278
           KK++   RDY S LDLI
Sbjct: 217 KKLDFIERDYASRLDLI 233


>ref|XP_004493398.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 603

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/86 (47%), Positives = 54/86 (62%)
 Frame = +3

Query: 21  KKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIAL 200
           KK   + + S +FK I + P  S+  ALDK+ EEG  L R+EI+L M  LR+R++Y  AL
Sbjct: 129 KKSSQKRVLSELFKDIMDAPGLSVRTALDKWVEEGKELSREEISLTMANLRRRKMYGRAL 188

Query: 201 QFVEWLEASKKIELDARDYVSHLDLI 278
           Q  EWLE+ K +E    DY S LDLI
Sbjct: 189 QLSEWLESKKHLEFVDSDYASRLDLI 214


>ref|XP_004493397.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 609

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/86 (47%), Positives = 54/86 (62%)
 Frame = +3

Query: 21  KKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIAL 200
           KK   + + S +FK I + P  S+  ALDK+ EEG  L R+EI+L M  LR+R++Y  AL
Sbjct: 135 KKSSQKRVLSELFKDIMDAPGLSVRTALDKWVEEGKELSREEISLTMANLRRRKMYGRAL 194

Query: 201 QFVEWLEASKKIELDARDYVSHLDLI 278
           Q  EWLE+ K +E    DY S LDLI
Sbjct: 195 QLSEWLESKKHLEFVDSDYASRLDLI 220


>ref|XP_002303946.2| hypothetical protein POPTR_0003s19300g [Populus trichocarpa]
           gi|550343533|gb|EEE78925.2| hypothetical protein
           POPTR_0003s19300g [Populus trichocarpa]
          Length = 524

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 46/90 (51%), Positives = 56/90 (62%)
 Frame = +3

Query: 9   EGGAKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLY 188
           E G KKE L LL++     I ETP  +++  L K+ EEGN L R EI L M  LRK++LY
Sbjct: 37  ESGDKKEALELLNT-----ITETP--NIVDFLSKFTEEGNELSRGEIYLIMDHLRKKQLY 89

Query: 189 SIALQFVEWLEASKKIELDARDYVSHLDLI 278
             ALQF EWLE SK+ +   RDY  HLD I
Sbjct: 90  WRALQFSEWLERSKQTDFTERDYACHLDCI 119


>ref|XP_004955817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Setaria italica]
          Length = 625

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/75 (45%), Positives = 54/75 (72%)
 Frame = +3

Query: 54  IFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIALQFVEWLEASKK 233
           +F+I+ +TP + LM  LD + + GN L R ++++ +F LRK+RLYS AL+F++W+E  K 
Sbjct: 165 LFQIVLDTPTSLLMAVLDTWVKAGNCLERSKVSMVLFHLRKQRLYSKALKFMDWIERRKL 224

Query: 234 IELDARDYVSHLDLI 278
           ++ +  DY SHLDLI
Sbjct: 225 LDFEECDYASHLDLI 239


>ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
          Length = 608

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/87 (48%), Positives = 56/87 (64%)
 Frame = +3

Query: 18  AKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLYSIA 197
           A+K+  +   S +F  I +    S+  ALDK+  EG  L R EI+LAM  LRKRR++  A
Sbjct: 132 AEKKSSKWRPSELFNAIWKASVLSVPSALDKWVSEGKDLSRAEISLAMLHLRKRRMFGKA 191

Query: 198 LQFVEWLEASKKIELDARDYVSHLDLI 278
           LQF EWLEA+ ++E + RDY S LDLI
Sbjct: 192 LQFSEWLEANGQLEFNQRDYASRLDLI 218


>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Brachypodium distachyon]
          Length = 612

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/92 (40%), Positives = 56/92 (60%)
 Frame = +3

Query: 3   ASEGGAKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRR 182
           A     K+ + ++   P+ K++ E P N +   L K+  +GN++ R ++  A+  LR+RR
Sbjct: 131 ADSKSEKEPKKKISQCPLLKVMLEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRR 190

Query: 183 LYSIALQFVEWLEASKKIELDARDYVSHLDLI 278
            +S ALQ +EWLE SK IEL  RDY S LDL+
Sbjct: 191 FFSKALQLLEWLEESKLIELVERDYASRLDLM 222


>ref|XP_006416900.1| hypothetical protein EUTSA_v10007131mg [Eutrema salsugineum]
           gi|567151345|ref|XP_006416901.1| hypothetical protein
           EUTSA_v10007131mg [Eutrema salsugineum]
           gi|557094671|gb|ESQ35253.1| hypothetical protein
           EUTSA_v10007131mg [Eutrema salsugineum]
           gi|557094672|gb|ESQ35254.1| hypothetical protein
           EUTSA_v10007131mg [Eutrema salsugineum]
          Length = 601

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 44/90 (48%), Positives = 53/90 (58%)
 Frame = +3

Query: 9   EGGAKKERLRLLHSPIFKIIKETPRNSLMRALDKYAEEGNSLGRDEINLAMFKLRKRRLY 188
           E G K    R   S +FK I      S+  ALDK+ EEG  + R EI  AM +LR+RR+Y
Sbjct: 124 EAGKKAASKR--SSELFKDILAVSGLSVASALDKWVEEGKEINRTEIANAMLQLRRRRMY 181

Query: 189 SIALQFVEWLEASKKIELDARDYVSHLDLI 278
             ALQ  EWLE +K  EL+ RDY S LDLI
Sbjct: 182 GRALQMAEWLEENKPFELEERDYASRLDLI 211